Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:33:45 (6341): wrapper (7.7.26015): starting
21:33:45 (6341): wrapper: running run_atlas (--nthreads 8)
[2026-04-21 21:33:45] Arguments: --nthreads 8
[2026-04-21 21:33:45] Threads: 8
[2026-04-21 21:33:45] Checking for CVMFS
[2026-04-21 21:33:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-21 21:33:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-21 21:33:49] Running cvmfs_config stat atlas.cern.ch
[2026-04-21 21:33:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-21 21:33:51] 2.11.2.0 4855 8823 101724 158701 3 11 19169587 25165825 107 130560 0 2223461 99.703 5640661 21498 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-21 21:33:51] CVMFS is ok
[2026-04-21 21:33:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 21:33:51] Checking for apptainer binary...
[2026-04-21 21:33:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-21 21:33:51] Running /usr/bin/apptainer --version
[2026-04-21 21:33:51] apptainer version 1.3.2-1.el7
[2026-04-21 21:33:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 21:34:08] cg-vwn497.simple-grid.lan
[2026-04-21 21:34:08] apptainer works
[2026-04-21 21:34:08] Set ATHENA_PROC_NUMBER=8
[2026-04-21 21:34:08] Set ATHENA_CORE_NUMBER=8
[2026-04-21 21:34:08] Starting ATLAS job with PandaID=7105514974
[2026-04-21 21:34:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-22 03:31:21]  *** The last 200 lines of the pilot log: ***
[2026-04-22 03:31:21] 2026-04-22 01:30:14,052 | INFO     | this job has now completed (state=finished)
[2026-04-22 03:31:21] 2026-04-22 01:30:14,052 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-22 03:31:21] 2026-04-22 01:30:14,052 | INFO     | log transfer has been attempted: DONE
[2026-04-22 03:31:21] 2026-04-22 01:30:14,052 | INFO     | job 7105514974 has finished - writing final server update
[2026-04-22 03:31:21] 2026-04-22 01:30:14,052 | INFO     | total number of processed events: 400 (read)
[2026-04-22 03:31:21] 2026-04-22 01:30:14,054 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-7105514974/memory_monitor_summary.json (trf name=prmon)
[2026-04-22 03:31:21] 2026-04-22 01:30:14,055 | INFO     | extracted standard info from prmon json
[2026-04-22 03:31:21] 2026-04-22 01:30:14,055 | INFO     | extracted standard memory fields from prmon json
[2026-04-22 03:31:21] 2026-04-22 01:30:14,055 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-22 03:31:21] 2026-04-22 01:30:14,055 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-22 03:31:21] 2026-04-22 01:30:14,062 | INFO     | fitting pss+swap vs Time
[2026-04-22 03:31:21] 2026-04-22 01:30:14,062 | INFO     | sum of square deviations: 12080189290.0
[2026-04-22 03:31:21] 2026-04-22 01:30:14,066 | INFO     | sum of deviations: 172372815765.00003
[2026-04-22 03:31:21] 2026-04-22 01:30:14,066 | INFO     | mean x (centered): 0.0
[2026-04-22 03:31:21] 2026-04-22 01:30:14,066 | INFO     | mean y: 2486204.3392330385
[2026-04-22 03:31:21] 2026-04-22 01:30:14,066 | INFO     | intersect: 2486204.3392330385
[2026-04-22 03:31:21] 2026-04-22 01:30:14,067 | INFO     | chi2: 9.460477892207049
[2026-04-22 03:31:21] 2026-04-22 01:30:14,067 | INFO     | sum of square deviations: 11553509647.5
[2026-04-22 03:31:21] 2026-04-22 01:30:14,070 | INFO     | sum of deviations: 216655214843.5
[2026-04-22 03:31:21] 2026-04-22 01:30:14,071 | INFO     | mean x (centered): 0.0
[2026-04-22 03:31:21] 2026-04-22 01:30:14,071 | INFO     | mean y: 2498905.260479042
[2026-04-22 03:31:21] 2026-04-22 01:30:14,071 | INFO     | intersect: 2498905.260479042
[2026-04-22 03:31:21] 2026-04-22 01:30:14,071 | INFO     | chi2: 7.926772509677173
[2026-04-22 03:31:21] 2026-04-22 01:30:14,072 | INFO     | current chi2=7.926772509677173 (change=16.21171150131059 %)
[2026-04-22 03:31:21] 2026-04-22 01:30:14,072 | INFO     | right removable region: 333
[2026-04-22 03:31:21] 2026-04-22 01:30:14,072 | INFO     | sum of square deviations: 11553509647.5
[2026-04-22 03:31:21] 2026-04-22 01:30:14,076 | INFO     | sum of deviations: 47950556303.5
[2026-04-22 03:31:21] 2026-04-22 01:30:14,076 | INFO     | mean x (centered): 0.0
[2026-04-22 03:31:21] 2026-04-22 01:30:14,076 | INFO     | mean y: 2522221.0209580837
[2026-04-22 03:31:21] 2026-04-22 01:30:14,076 | INFO     | intersect: 2522221.0209580837
[2026-04-22 03:31:21] 2026-04-22 01:30:14,077 | INFO     | chi2: 4.319691760117566
[2026-04-22 03:31:21] 2026-04-22 01:30:14,077 | INFO     | current chi2=4.319691760117566 (change=54.33960303764508 %)
[2026-04-22 03:31:21] 2026-04-22 01:30:14,077 | INFO     | sum of square deviations: 11042365180.0
[2026-04-22 03:31:21] 2026-04-22 01:30:14,080 | INFO     | sum of deviations: -40316025999.0
[2026-04-22 03:31:21] 2026-04-22 01:30:14,081 | INFO     | mean x (centered): 0.0
[2026-04-22 03:31:21] 2026-04-22 01:30:14,081 | INFO     | mean y: 2548511.310030395
[2026-04-22 03:31:21] 2026-04-22 01:30:14,081 | INFO     | intersect: 2548511.310030395
[2026-04-22 03:31:21] 2026-04-22 01:30:14,081 | INFO     | chi2: 1.8097015848135496
[2026-04-22 03:31:21] 2026-04-22 01:30:14,081 | INFO     | current chi2=1.8097015848135496 (change=58.105770381072375 %)
[2026-04-22 03:31:21] 2026-04-22 01:30:14,082 | INFO     | sum of square deviations: 10546523325.0
[2026-04-22 03:31:21] 2026-04-22 01:30:14,085 | INFO     | sum of deviations: -51211714178.0
[2026-04-22 03:31:21] 2026-04-22 01:30:14,085 | INFO     | mean x (centered): 0.0
[2026-04-22 03:31:21] 2026-04-22 01:30:14,085 | INFO     | mean y: 2551846.0802469137
[2026-04-22 03:31:21] 2026-04-22 01:30:14,085 | INFO     | intersect: 2551846.0802469137
[2026-04-22 03:31:21] 2026-04-22 01:30:14,086 | INFO     | chi2: 1.752350191562629
[2026-04-22 03:31:21] 2026-04-22 01:30:14,086 | INFO     | current chi2=1.752350191562629 (change=3.169107754128947 %)
[2026-04-22 03:31:21] 2026-04-22 01:30:14,086 | INFO     | left removable region: 15
[2026-04-22 03:31:21] 2026-04-22 01:30:14,087 | INFO     | sum of square deviations: 9971385099.5
[2026-04-22 03:31:21] 2026-04-22 01:30:14,090 | INFO     | sum of deviations: -5629872420.5
[2026-04-22 03:31:21] 2026-04-22 01:30:14,090 | INFO     | mean x (centered): 0.0
[2026-04-22 03:31:21] 2026-04-22 01:30:14,090 | INFO     | mean y: 2566172.072327044
[2026-04-22 03:31:21] 2026-04-22 01:30:14,090 | INFO     | intersect: 2566172.072327044
[2026-04-22 03:31:21] 2026-04-22 01:30:14,091 | INFO     | chi2: 0.08398613128711294
[2026-04-22 03:31:21] 2026-04-22 01:30:14,091 | INFO     | current memory leak: -0.56 B/s (using 318 data points, chi2=0.08)
[2026-04-22 03:31:21] 2026-04-22 01:30:14,091 | INFO     | could have reported an average CPU frequency of 2249 MHz (15 samples)
[2026-04-22 03:31:21] 2026-04-22 01:30:14,092 | INFO     | ..............................
[2026-04-22 03:31:21] 2026-04-22 01:30:14,092 | INFO     | . Timing measurements:
[2026-04-22 03:31:21] 2026-04-22 01:30:14,092 | INFO     | . get job = 0 s
[2026-04-22 03:31:21] 2026-04-22 01:30:14,092 | INFO     | . initial setup = 115 s
[2026-04-22 03:31:21] 2026-04-22 01:30:14,092 | INFO     | . payload setup = 203 s
[2026-04-22 03:31:21] 2026-04-22 01:30:14,092 | INFO     | . stage-in = 0 s
[2026-04-22 03:31:21] 2026-04-22 01:30:14,092 | INFO     | . payload execution = 20750 s
[2026-04-22 03:31:21] 2026-04-22 01:30:14,092 | INFO     | . stage-out = 4 s
[2026-04-22 03:31:21] 2026-04-22 01:30:14,093 | INFO     | . log creation = 1 s
[2026-04-22 03:31:21] 2026-04-22 01:30:14,093 | INFO     | ..............................
[2026-04-22 03:31:21] 2026-04-22 01:30:14,337 | INFO     | 
[2026-04-22 03:31:21] 2026-04-22 01:30:14,337 | INFO     | job summary report
[2026-04-22 03:31:21] 2026-04-22 01:30:14,337 | INFO     | --------------------------------------------------
[2026-04-22 03:31:21] 2026-04-22 01:30:14,337 | INFO     | PanDA job id: 7105514974
[2026-04-22 03:31:21] 2026-04-22 01:30:14,337 | INFO     | task id: 49820375
[2026-04-22 03:31:21] 2026-04-22 01:30:14,337 | INFO     | errors: (none)
[2026-04-22 03:31:21] 2026-04-22 01:30:14,337 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-22 03:31:21] 2026-04-22 01:30:14,338 | INFO     | pilot state: finished 
[2026-04-22 03:31:21] 2026-04-22 01:30:14,338 | INFO     | transexitcode: 0
[2026-04-22 03:31:21] 2026-04-22 01:30:14,338 | INFO     | exeerrorcode: 0
[2026-04-22 03:31:21] 2026-04-22 01:30:14,338 | INFO     | exeerrordiag: 
[2026-04-22 03:31:21] 2026-04-22 01:30:14,338 | INFO     | exitcode: 0
[2026-04-22 03:31:21] 2026-04-22 01:30:14,338 | INFO     | exitmsg: OK
[2026-04-22 03:31:21] 2026-04-22 01:30:14,338 | INFO     | cpuconsumptiontime: 79337 s
[2026-04-22 03:31:21] 2026-04-22 01:30:14,338 | INFO     | nevents: 400
[2026-04-22 03:31:21] 2026-04-22 01:30:14,338 | INFO     | neventsw: 0
[2026-04-22 03:31:21] 2026-04-22 01:30:14,338 | INFO     | pid: 14821
[2026-04-22 03:31:21] 2026-04-22 01:30:14,338 | INFO     | pgrp: 14821
[2026-04-22 03:31:21] 2026-04-22 01:30:14,338 | INFO     | corecount: 8
[2026-04-22 03:31:21] 2026-04-22 01:30:14,338 | INFO     | event service: False
[2026-04-22 03:31:21] 2026-04-22 01:30:14,338 | INFO     | sizes: {0: 2274558, 1: 2247703, 2: 2276443, 12: 2276471, 20958: 2310110, 20963: 2319110, 20965: 2319294, 20968: 2319488}
[2026-04-22 03:31:21] 2026-04-22 01:30:14,338 | INFO     | --------------------------------------------------
[2026-04-22 03:31:21] 2026-04-22 01:30:14,339 | INFO     | 
[2026-04-22 03:31:21] 2026-04-22 01:30:14,339 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-04-22 03:31:21] 2026-04-22 01:30:14,900 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-22 03:31:21] 2026-04-22 01:30:14,901 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-22 03:31:21] 2026-04-22 01:30:14,901 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-22 03:31:21] 2026-04-22 01:30:14,901 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-22 03:31:21] 2026-04-22 01:30:14,901 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-22 03:31:21] 2026-04-22 01:30:14,901 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-22 03:31:21] 2026-04-22 01:30:14,901 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-22 03:31:21] 2026-04-22 01:30:14,901 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-22 03:31:21] 2026-04-22 01:30:14,901 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-22 03:31:21] 2026-04-22 01:30:14,901 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-22 03:31:21] 2026-04-22 01:30:14,901 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-22 03:31:21] 2026-04-22 01:30:14,901 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-22 03:31:21] 2026-04-22 01:30:14,901 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-22 03:31:21] 2026-04-22 01:30:14,901 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-22 03:31:21] 2026-04-22 01:30:14,901 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-22 03:31:21] 2026-04-22 01:30:14,901 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-22 03:31:21] 2026-04-22 01:30:14,901 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-22 03:31:21] 2026-04-22 01:30:14,902 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-22 03:31:21] 2026-04-22 01:30:14,902 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-22 03:31:21] 2026-04-22 01:30:14,902 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-22 03:31:21] 2026-04-22 01:30:14,902 | INFO     | job 7105514974 has completed (purged errors)
[2026-04-22 03:31:21] 2026-04-22 01:30:14,902 | INFO     | overall cleanup function is called
[2026-04-22 03:31:21] 2026-04-22 01:30:15,913 | INFO     | --- collectZombieJob: --- 10, [14821]
[2026-04-22 03:31:21] 2026-04-22 01:30:15,913 | INFO     | zombie collector waiting for pid 14821
[2026-04-22 03:31:21] 2026-04-22 01:30:15,913 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-22 03:31:21] 2026-04-22 01:30:15,914 | INFO     | collected zombie processes
[2026-04-22 03:31:21] 2026-04-22 01:30:15,914 | INFO     | will attempt to kill all subprocesses of pid=14821
[2026-04-22 03:31:21] 2026-04-22 01:30:16,000 | INFO     | process IDs to be killed: [14821] (in reverse order)
[2026-04-22 03:31:21] 2026-04-22 01:30:16,900 | WARNING  | found no corresponding commands to process id(s)
[2026-04-22 03:31:21] 2026-04-22 01:30:16,901 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-22 03:31:21] 2026-04-22 01:30:16,902 | INFO     | did not find any defunct processes belonging to 14821
[2026-04-22 03:31:21] 2026-04-22 01:30:16,904 | INFO     | did not find any defunct processes belonging to 14821
[2026-04-22 03:31:21] 2026-04-22 01:30:16,904 | INFO     | Ready for new job
[2026-04-22 03:31:21] 2026-04-22 01:30:16,906 | INFO     | **************************************
[2026-04-22 03:31:21] 2026-04-22 01:30:16,906 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-22 03:31:21] 2026-04-22 01:30:16,906 | INFO     | **************************************
[2026-04-22 03:31:21] 2026-04-22 01:30:16,907 | INFO     | 
[2026-04-22 03:31:21] 2026-04-22 01:30:16,907 | INFO     | pilot is running in a VM
[2026-04-22 03:31:21] 2026-04-22 01:30:16,907 | INFO     | architecture information:
[2026-04-22 03:31:21] 2026-04-22 01:30:16,908 | INFO     | executing command: cat /etc/os-release
[2026-04-22 03:31:21] 2026-04-22 01:30:17,102 | INFO     | cat /etc/os-release:
[2026-04-22 03:31:21] NAME="CentOS Linux"
[2026-04-22 03:31:21] VERSION="7 (Core)"
[2026-04-22 03:31:21] ID="centos"
[2026-04-22 03:31:21] ID_LIKE="rhel fedora"
[2026-04-22 03:31:21] VERSION_ID="7"
[2026-04-22 03:31:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-22 03:31:21] ANSI_COLOR="0;31"
[2026-04-22 03:31:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-22 03:31:21] HOME_URL="https://www.centos.org/"
[2026-04-22 03:31:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-22 03:31:21] 
[2026-04-22 03:31:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-22 03:31:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-22 03:31:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-22 03:31:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-22 03:31:21] 
[2026-04-22 03:31:21] 2026-04-22 01:30:17,103 | INFO     | **************************************
[2026-04-22 03:31:21] 2026-04-22 01:30:17,606 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-04-22 03:31:21] 2026-04-22 01:30:17,821 | INFO     | sufficient remaining disk space (488838791168 B)
[2026-04-22 03:31:21] 2026-04-22 01:30:17,821 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-22 03:31:21] 2026-04-22 01:30:17,821 | INFO     | current server update state: UPDATING_FINAL
[2026-04-22 03:31:21] 2026-04-22 01:30:17,822 | INFO     | update_server=False
[2026-04-22 03:31:21] 2026-04-22 01:30:17,822 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-22 03:31:21] 2026-04-22 01:30:17,822 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-22 03:31:21] 2026-04-22 01:30:17,822 | INFO     | aborting loop
[2026-04-22 03:31:21] 2026-04-22 01:30:17,823 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-22 03:31:21] 2026-04-22 01:30:17,829 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-22 03:31:21] 2026-04-22 01:30:18,065 | INFO     | all data control threads have been joined
[2026-04-22 03:31:21] 2026-04-22 01:30:18,375 | INFO     | all payload control threads have been joined
[2026-04-22 03:31:21] 2026-04-22 01:30:18,828 | INFO     | [job] job monitor thread has finished
[2026-04-22 03:31:21] 2026-04-22 01:30:18,832 | INFO     | [job] retrieve thread has finished
[2026-04-22 03:31:21] 2026-04-22 01:30:18,922 | INFO     | [job] create_data_payload thread has finished
[2026-04-22 03:31:21] 2026-04-22 01:30:18,969 | INFO     | all job control threads have been joined
[2026-04-22 03:31:21] 2026-04-22 01:30:18,988 | INFO     | [payload] execute_payloads thread has finished
[2026-04-22 03:31:21] 2026-04-22 01:30:19,071 | INFO     | [data] control thread has finished
[2026-04-22 03:31:21] 2026-04-22 01:30:19,207 | INFO     | [data] copytool_in thread has finished
[2026-04-22 03:31:21] 2026-04-22 01:30:19,217 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-22 03:31:21] 2026-04-22 01:30:19,239 | INFO     | [payload] failed_post thread has finished
[2026-04-22 03:31:21] 2026-04-22 01:30:19,381 | INFO     | [payload] control thread has finished
[2026-04-22 03:31:21] 2026-04-22 01:30:19,830 | INFO     | [data] copytool_out thread has finished
[2026-04-22 03:31:21] 2026-04-22 01:30:19,975 | INFO     | [job] control thread has finished
[2026-04-22 03:31:21] 2026-04-22 01:30:20,004 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-22 03:31:21] 2026-04-22 01:30:20,092 | INFO     | [payload] validate_pre thread has finished
[2026-04-22 03:31:21] 2026-04-22 01:30:20,223 | INFO     | [job] queue monitor thread has finished
[2026-04-22 03:31:21] 2026-04-22 01:30:20,255 | INFO     | [job] validate thread has finished
[2026-04-22 03:31:21] 2026-04-22 01:30:20,306 | INFO     | [payload] validate_post thread has finished
[2026-04-22 03:31:21] 2026-04-22 01:30:21,839 | INFO     | [data] queue_monitor thread has finished
[2026-04-22 03:31:21] 2026-04-22 01:30:46,589 | INFO     | PID=10385 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-22 03:31:21] 2026-04-22 01:30:46,590 | INFO     | .. there are 2 such processes running
[2026-04-22 03:31:21] 2026-04-22 01:30:46,590 | INFO     | found 0 job(s) in 20 queues
[2026-04-22 03:31:21] 2026-04-22 01:30:46,590 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-22 03:31:21] 2026-04-22 01:30:46,590 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-22 03:31:21] 2026-04-22 01:31:09,323 | INFO     | [monitor] cgroup control has ended
[2026-04-22 03:31:21] 2026-04-22 01:31:10,857 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140708179130176)>', '<ExcThread(monitor, started 140707733948160)>']
[2026-04-22 03:31:21] 2026-04-22 01:31:11,740 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-22 03:31:21] 2026-04-22 01:31:11,740 | INFO     | [monitor] control thread has ended
[2026-04-22 03:31:21] 2026-04-22 01:31:15,883 | INFO     | all workflow threads have been joined
[2026-04-22 03:31:21] 2026-04-22 01:31:15,883 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-22 03:31:21] 2026-04-22 01:31:15,883 | INFO     | traces error code: 0
[2026-04-22 03:31:21] 2026-04-22 01:31:15,884 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-22 03:31:21] 2026-04-22 01:31:16,358 [wrapper] ==== pilot stdout END ====
[2026-04-22 03:31:21] 2026-04-22 01:31:16,475 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-22 03:31:21] 2026-04-22 01:31:16,579 [wrapper] pilotpid: 10385
[2026-04-22 03:31:21] 2026-04-22 01:31:16,679 [wrapper] Pilot exit status: 0
[2026-04-22 03:31:21] 2026-04-22 01:31:17,106 [wrapper] pandaids: 7105514974
[2026-04-22 03:31:21] 2026-04-22 01:31:18,214 [wrapper] cleanup supervisor_pilot 21800 10386
[2026-04-22 03:31:21] 2026-04-22 01:31:18,316 [wrapper] Test setup, not cleaning
[2026-04-22 03:31:21] 2026-04-22 01:31:18,377 [wrapper] apfmon messages muted
[2026-04-22 03:31:21] 2026-04-22 01:31:18,478 [wrapper] ==== wrapper stdout END ====
[2026-04-22 03:31:21] 2026-04-22 01:31:18,599 [wrapper] ==== wrapper stderr END ====
[2026-04-22 03:31:21]  *** Error codes and diagnostics ***
[2026-04-22 03:31:21]     "exeErrorCode": 0,
[2026-04-22 03:31:21]     "pilotErrorCode": 0,
[2026-04-22 03:31:21]  *** Listing of results directory ***
[2026-04-22 03:31:21] total 2462112
[2026-04-22 03:31:21] -rwx------. 1 boinc boinc      36322 Apr 21 13:22 runpilot2-wrapper.sh
[2026-04-22 03:31:21] -rw-r--r--. 1 boinc boinc     644190 Apr 21 19:04 pilot3.tar.gz
[2026-04-22 03:31:21] -rw-r--r--. 1 boinc boinc       5094 Apr 21 19:27 queuedata.json
[2026-04-22 03:31:21] -rw-r--r--. 1 boinc boinc        100 Apr 21 21:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-22 03:31:21] -rwxr-xr-x. 1 boinc boinc       7986 Apr 21 21:28 run_atlas
[2026-04-22 03:31:21] -rw-r--r--. 1 boinc boinc        105 Apr 21 21:28 job.xml
[2026-04-22 03:31:21] -rw-r--r--. 2 boinc boinc 2247878637 Apr 21 21:33 EVNT.49820373._000049.pool.root.1
[2026-04-22 03:31:21] -rw-r--r--. 2 boinc boinc      15665 Apr 21 21:33 start_atlas.sh
[2026-04-22 03:31:21] drwxrwx--x. 2 boinc boinc         68 Apr 21 21:33 shared
[2026-04-22 03:31:21] -rw-r--r--. 2 boinc boinc     656942 Apr 21 21:33 input.tar.gz
[2026-04-22 03:31:21] -rw-r--r--. 1 boinc boinc       6306 Apr 21 21:33 init_data.xml
[2026-04-22 03:31:21] -rw-r--r--. 1 boinc boinc          0 Apr 21 21:33 boinc_lockfile
[2026-04-22 03:31:21] -rw-r--r--. 1 boinc boinc       2586 Apr 21 21:34 pandaJob.out
[2026-04-22 03:31:21] -rw-------. 1 boinc boinc        415 Apr 21 21:40 workernode_map.json
[2026-04-22 03:31:21] -rw-------. 1 boinc boinc     997082 Apr 21 21:40 agis_schedconf.cvmfs.json
[2026-04-22 03:31:21] drwx------. 5 boinc boinc       4096 Apr 21 21:40 pilot3
[2026-04-22 03:31:21] -rw-------. 1 boinc boinc  264447807 Apr 22 03:28 HITS.49820375._011696.pool.root.1
[2026-04-22 03:31:21] -rw-r--r--. 1 boinc boinc        490 Apr 22 03:29 boinc_task_state.xml
[2026-04-22 03:31:21] -rw-------. 1 boinc boinc       1011 Apr 22 03:30 memory_monitor_summary.json
[2026-04-22 03:31:21] -rw-------. 1 boinc boinc         95 Apr 22 03:30 pilot_heartbeat.json
[2026-04-22 03:31:21] -rw-------. 1 boinc boinc    1509089 Apr 22 03:30 agis_ddmendpoints.agis.ALL.json
[2026-04-22 03:31:21] -rw-------. 1 boinc boinc     485043 Apr 22 03:30 log.49820375._011696.job.log.tgz.1
[2026-04-22 03:31:21] -rw-------. 1 boinc boinc       6334 Apr 22 03:30 heartbeat_new.json
[2026-04-22 03:31:21] -rw-------. 1 boinc boinc       6225 Apr 22 03:30 heartbeat.json
[2026-04-22 03:31:21] -rw-r--r--. 1 boinc boinc         28 Apr 22 03:30 wrapper_checkpoint.txt
[2026-04-22 03:31:21] -rw-r--r--. 1 boinc boinc       8192 Apr 22 03:30 boinc_mmap_file
[2026-04-22 03:31:21] -rw-------. 1 boinc boinc       4880 Apr 22 03:31 pilotlog.txt
[2026-04-22 03:31:21] -rw-------. 1 boinc boinc    1929538 Apr 22 03:31 log.49820375._011696.job.log.1
[2026-04-22 03:31:21] -rw-------. 1 boinc boinc        357 Apr 22 03:31 output.list
[2026-04-22 03:31:21] -rw-r--r--. 1 boinc boinc        410 Apr 22 03:31 runtime_log
[2026-04-22 03:31:21] -rw-------. 1 boinc boinc    2437120 Apr 22 03:31 result.tar.gz
[2026-04-22 03:31:21] -rw-r--r--. 1 boinc boinc       8454 Apr 22 03:31 runtime_log.err
[2026-04-22 03:31:21] -rw-------. 1 boinc boinc        656 Apr 22 03:31 5dd0ccba94a1.diag
[2026-04-22 03:31:21] -rw-r--r--. 1 boinc boinc      20567 Apr 22 03:31 stderr.txt
[2026-04-22 03:31:21] HITS file was successfully produced:
[2026-04-22 03:31:21] -rw-------. 1 boinc boinc 264447807 Apr 22 03:28 shared/HITS.pool.root.1
[2026-04-22 03:31:21]  *** Contents of shared directory: ***
[2026-04-22 03:31:21] total 2456488
[2026-04-22 03:31:21] -rw-r--r--. 2 boinc boinc 2247878637 Apr 21 21:33 ATLAS.root_0
[2026-04-22 03:31:21] -rw-r--r--. 2 boinc boinc      15665 Apr 21 21:33 start_atlas.sh
[2026-04-22 03:31:21] -rw-r--r--. 2 boinc boinc     656942 Apr 21 21:33 input.tar.gz
[2026-04-22 03:31:21] -rw-------. 1 boinc boinc  264447807 Apr 22 03:28 HITS.pool.root.1
[2026-04-22 03:31:21] -rw-------. 1 boinc boinc    2437120 Apr 22 03:31 result.tar.gz
03:31:22 (6341): run_atlas exited; CPU time 79531.892302
03:31:22 (6341): called boinc_finish(0)

</stderr_txt>
]]>

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