Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:57:43 (4157397): wrapper (7.7.26015): starting
20:57:43 (4157397): wrapper: running run_atlas (--nthreads 8)
[2026-04-21 20:57:43] Arguments: --nthreads 8
[2026-04-21 20:57:43] Threads: 8
[2026-04-21 20:57:43] Checking for CVMFS
[2026-04-21 20:57:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-21 20:57:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-21 20:57:44] Running cvmfs_config stat atlas.cern.ch
[2026-04-21 20:57:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-21 20:57:45] 2.13.3.0 9863 240905 155636 158709 0 297 26329976 32935936 21298 16776704 0 1068084539 99.714 808128082 32172 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-21 20:57:45] CVMFS is ok
[2026-04-21 20:57:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 20:57:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 20:57:45] Further information can be found at the LHC@home message board.
[2026-04-21 20:57:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 20:57:45] Checking for apptainer binary...
[2026-04-21 20:57:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-21 20:57:45] Running /usr/bin/apptainer --version
[2026-04-21 20:57:45] apptainer version 1.4.5-2.el9
[2026-04-21 20:57:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 20:57:46] c-5-3.aglt2.org
[2026-04-21 20:57:46] apptainer works
[2026-04-21 20:57:46] Set ATHENA_PROC_NUMBER=8
[2026-04-21 20:57:46] Set ATHENA_CORE_NUMBER=8
[2026-04-21 20:57:46] Starting ATLAS job with PandaID=7105514962
[2026-04-21 20:57:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-22 05:36:29]  *** The last 200 lines of the pilot log: ***
[2026-04-22 05:36:29] 2026-04-22 09:35:57,766 | INFO     | preparing for final server update for job 7105514962 in state='finished'
[2026-04-22 05:36:29] 2026-04-22 09:35:57,767 | INFO     | reading metadata from: /tmp/boinchome/slots/2/PanDA_Pilot-7105514962/jobReport.json
[2026-04-22 05:36:29] 2026-04-22 09:35:57,769 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/2/workernode_map.json
[2026-04-22 05:36:29] 2026-04-22 09:35:57,770 | INFO     | this job has now completed (state=finished)
[2026-04-22 05:36:29] 2026-04-22 09:35:57,770 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-22 05:36:29] 2026-04-22 09:35:57,770 | INFO     | log transfer has been attempted: DONE
[2026-04-22 05:36:29] 2026-04-22 09:35:57,770 | INFO     | job 7105514962 has finished - writing final server update
[2026-04-22 05:36:29] 2026-04-22 09:35:57,771 | INFO     | total number of processed events: 400 (read)
[2026-04-22 05:36:29] 2026-04-22 09:35:57,779 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7105514962/memory_monitor_summary.json (trf name=prmon)
[2026-04-22 05:36:29] 2026-04-22 09:35:57,780 | INFO     | extracted standard info from prmon json
[2026-04-22 05:36:29] 2026-04-22 09:35:57,780 | INFO     | extracted standard memory fields from prmon json
[2026-04-22 05:36:29] 2026-04-22 09:35:57,781 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-22 05:36:29] 2026-04-22 09:35:57,781 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-22 05:36:29] 2026-04-22 09:35:57,791 | INFO     | fitting pss+swap vs Time
[2026-04-22 05:36:29] 2026-04-22 09:35:57,792 | INFO     | sum of square deviations: 40413725753.22289
[2026-04-22 05:36:29] 2026-04-22 09:35:57,798 | INFO     | sum of deviations: 164423303311.81076
[2026-04-22 05:36:29] 2026-04-22 09:35:57,799 | INFO     | mean x (centered): 0.0
[2026-04-22 05:36:29] 2026-04-22 09:35:57,799 | INFO     | mean y: 2582960.520710059
[2026-04-22 05:36:29] 2026-04-22 09:35:57,799 | INFO     | intersect: 2582960.520710059
[2026-04-22 05:36:29] 2026-04-22 09:35:57,800 | INFO     | chi2: 4.38615398241043
[2026-04-22 05:36:29] 2026-04-22 09:35:57,801 | INFO     | sum of square deviations: 39229978813.67325
[2026-04-22 05:36:29] 2026-04-22 09:35:57,807 | INFO     | sum of deviations: 195924318534.9962
[2026-04-22 05:36:29] 2026-04-22 09:35:57,807 | INFO     | mean x (centered): 0.0
[2026-04-22 05:36:29] 2026-04-22 09:35:57,808 | INFO     | mean y: 2586984.513944223
[2026-04-22 05:36:29] 2026-04-22 09:35:57,808 | INFO     | intersect: 2586984.513944223
[2026-04-22 05:36:29] 2026-04-22 09:35:57,809 | INFO     | chi2: 3.708420998890844
[2026-04-22 05:36:29] 2026-04-22 09:35:57,809 | INFO     | current chi2=3.708420998890844 (change=15.45164593485463 %)
[2026-04-22 05:36:29] 2026-04-22 09:35:57,809 | INFO     | right removable region: 501
[2026-04-22 05:36:29] 2026-04-22 09:35:57,810 | INFO     | sum of square deviations: 39229781783.67327
[2026-04-22 05:36:29] 2026-04-22 09:35:57,816 | INFO     | sum of deviations: 2941047040.6095695
[2026-04-22 05:36:29] 2026-04-22 09:35:57,816 | INFO     | mean x (centered): 0.0
[2026-04-22 05:36:29] 2026-04-22 09:35:57,816 | INFO     | mean y: 2603736.3665338648
[2026-04-22 05:36:29] 2026-04-22 09:35:57,817 | INFO     | intersect: 2603736.3665338648
[2026-04-22 05:36:29] 2026-04-22 09:35:57,817 | INFO     | chi2: 0.8701676012215024
[2026-04-22 05:36:29] 2026-04-22 09:35:57,818 | INFO     | current chi2=0.8701676012215024 (change=80.1610339100932 %)
[2026-04-22 05:36:29] 2026-04-22 09:35:57,818 | INFO     | sum of square deviations: 38069187089.08267
[2026-04-22 05:36:29] 2026-04-22 09:35:57,824 | INFO     | sum of deviations: -23334292784.305832
[2026-04-22 05:36:29] 2026-04-22 09:35:57,825 | INFO     | mean x (centered): 0.0
[2026-04-22 05:36:29] 2026-04-22 09:35:57,825 | INFO     | mean y: 2607176.8832997987
[2026-04-22 05:36:29] 2026-04-22 09:35:57,825 | INFO     | intersect: 2607176.8832997987
[2026-04-22 05:36:29] 2026-04-22 09:35:57,826 | INFO     | chi2: 0.7488841653060364
[2026-04-22 05:36:29] 2026-04-22 09:35:57,826 | INFO     | current chi2=0.7488841653060364 (change=13.937939742322481 %)
[2026-04-22 05:36:29] 2026-04-22 09:35:57,826 | INFO     | left removable region: 10
[2026-04-22 05:36:29] 2026-04-22 09:35:57,827 | INFO     | sum of square deviations: 36707203486.51731
[2026-04-22 05:36:29] 2026-04-22 09:35:57,833 | INFO     | sum of deviations: 9349815227.417517
[2026-04-22 05:36:29] 2026-04-22 09:35:57,833 | INFO     | mean x (centered): 0.0
[2026-04-22 05:36:29] 2026-04-22 09:35:57,833 | INFO     | mean y: 2611523.865580448
[2026-04-22 05:36:29] 2026-04-22 09:35:57,834 | INFO     | intersect: 2611523.865580448
[2026-04-22 05:36:29] 2026-04-22 09:35:57,834 | INFO     | chi2: 0.05292495104099457
[2026-04-22 05:36:29] 2026-04-22 09:35:57,835 | INFO     | current memory leak: 0.25 B/s (using 491 data points, chi2=0.05)
[2026-04-22 05:36:29] 2026-04-22 09:35:57,835 | INFO     | could have reported an average CPU frequency of 2600 MHz (21 samples)
[2026-04-22 05:36:29] 2026-04-22 09:35:57,836 | INFO     | ..............................
[2026-04-22 05:36:29] 2026-04-22 09:35:57,836 | INFO     | . Timing measurements:
[2026-04-22 05:36:30] 2026-04-22 09:35:57,836 | INFO     | . get job = 0 s
[2026-04-22 05:36:30] 2026-04-22 09:35:57,836 | INFO     | . initial setup = 31 s
[2026-04-22 05:36:30] 2026-04-22 09:35:57,836 | INFO     | . payload setup = 69 s
[2026-04-22 05:36:30] 2026-04-22 09:35:57,836 | INFO     | . stage-in = 0 s
[2026-04-22 05:36:30] 2026-04-22 09:35:57,836 | INFO     | . payload execution = 30922 s
[2026-04-22 05:36:30] 2026-04-22 09:35:57,836 | INFO     | . stage-out = 2 s
[2026-04-22 05:36:30] 2026-04-22 09:35:57,837 | INFO     | . log creation = 0 s
[2026-04-22 05:36:30] 2026-04-22 09:35:57,837 | INFO     | ..............................
[2026-04-22 05:36:30] 2026-04-22 09:35:57,939 | INFO     | 
[2026-04-22 05:36:30] 2026-04-22 09:35:57,940 | INFO     | job summary report
[2026-04-22 05:36:30] 2026-04-22 09:35:57,940 | INFO     | --------------------------------------------------
[2026-04-22 05:36:30] 2026-04-22 09:35:57,940 | INFO     | PanDA job id: 7105514962
[2026-04-22 05:36:30] 2026-04-22 09:35:57,940 | INFO     | task id: 49820375
[2026-04-22 05:36:30] 2026-04-22 09:35:57,940 | INFO     | errors: (none)
[2026-04-22 05:36:30] 2026-04-22 09:35:57,940 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-22 05:36:30] 2026-04-22 09:35:57,940 | INFO     | pilot state: finished 
[2026-04-22 05:36:30] 2026-04-22 09:35:57,940 | INFO     | transexitcode: 0
[2026-04-22 05:36:30] 2026-04-22 09:35:57,940 | INFO     | exeerrorcode: 0
[2026-04-22 05:36:30] 2026-04-22 09:35:57,941 | INFO     | exeerrordiag: 
[2026-04-22 05:36:30] 2026-04-22 09:35:57,941 | INFO     | exitcode: 0
[2026-04-22 05:36:30] 2026-04-22 09:35:57,941 | INFO     | exitmsg: OK
[2026-04-22 05:36:30] 2026-04-22 09:35:57,941 | INFO     | cpuconsumptiontime: 88378 s
[2026-04-22 05:36:30] 2026-04-22 09:35:57,941 | INFO     | nevents: 400
[2026-04-22 05:36:30] 2026-04-22 09:35:57,941 | INFO     | neventsw: 0
[2026-04-22 05:36:30] 2026-04-22 09:35:57,941 | INFO     | pid: 4174975
[2026-04-22 05:36:30] 2026-04-22 09:35:57,941 | INFO     | pgrp: 4174975
[2026-04-22 05:36:30] 2026-04-22 09:35:57,941 | INFO     | corecount: 8
[2026-04-22 05:36:30] 2026-04-22 09:35:57,941 | INFO     | event service: False
[2026-04-22 05:36:30] 2026-04-22 09:35:57,942 | INFO     | sizes: {0: 2274555, 1: 2274639, 2: 2276468, 30995: 2314647, 30996: 2314646, 30998: 2323700, 30999: 2323884, 31002: 2324078}
[2026-04-22 05:36:30] 2026-04-22 09:35:57,942 | INFO     | --------------------------------------------------
[2026-04-22 05:36:30] 2026-04-22 09:35:57,942 | INFO     | 
[2026-04-22 05:36:30] 2026-04-22 09:35:57,942 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-04-22 05:36:30] 2026-04-22 09:35:57,961 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-22 05:36:30] 2026-04-22 09:35:57,962 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-22 05:36:30] 2026-04-22 09:35:57,962 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-22 05:36:30] 2026-04-22 09:35:57,962 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-22 05:36:30] 2026-04-22 09:35:57,962 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-22 05:36:30] 2026-04-22 09:35:57,962 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-22 05:36:30] 2026-04-22 09:35:57,963 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-22 05:36:30] 2026-04-22 09:35:57,963 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-22 05:36:30] 2026-04-22 09:35:57,963 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-22 05:36:30] 2026-04-22 09:35:57,963 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-22 05:36:30] 2026-04-22 09:35:57,963 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-22 05:36:30] 2026-04-22 09:35:57,963 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-22 05:36:30] 2026-04-22 09:35:57,963 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-22 05:36:30] 2026-04-22 09:35:57,963 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-22 05:36:30] 2026-04-22 09:35:57,963 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-22 05:36:30] 2026-04-22 09:35:57,964 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-22 05:36:30] 2026-04-22 09:35:57,964 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-22 05:36:30] 2026-04-22 09:35:57,964 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-22 05:36:30] 2026-04-22 09:35:57,964 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-22 05:36:30] 2026-04-22 09:35:57,964 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-22 05:36:30] 2026-04-22 09:35:57,964 | INFO     | job 7105514962 has completed (purged errors)
[2026-04-22 05:36:30] 2026-04-22 09:35:57,964 | INFO     | overall cleanup function is called
[2026-04-22 05:36:30] 2026-04-22 09:35:58,411 | WARNING  | process 4174975 can no longer be monitored (due to stat problems) - aborting
[2026-04-22 05:36:30] 2026-04-22 09:35:58,727 | INFO     | using path: /tmp/boinchome/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-04-22 05:36:30] 2026-04-22 09:35:58,972 | INFO     | --- collectZombieJob: --- 10, [4174975]
[2026-04-22 05:36:30] 2026-04-22 09:35:58,972 | INFO     | zombie collector waiting for pid 4174975
[2026-04-22 05:36:30] 2026-04-22 09:35:58,973 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-22 05:36:30] 2026-04-22 09:35:58,973 | INFO     | collected zombie processes
[2026-04-22 05:36:30] 2026-04-22 09:35:58,973 | INFO     | will attempt to kill all subprocesses of pid=4174975
[2026-04-22 05:36:30] 2026-04-22 09:35:59,193 | INFO     | number of running child processes to parent process 4174975: 1
[2026-04-22 05:36:30] 2026-04-22 09:35:59,194 | INFO     | maximum number of monitored processes: 7
[2026-04-22 05:36:30] 2026-04-22 09:35:59,194 | INFO     | aborting job monitoring since job object (job id=7105514962) has expired
[2026-04-22 05:36:30] 2026-04-22 09:35:59,482 | INFO     | process IDs to be killed: [4174975] (in reverse order)
[2026-04-22 05:36:30] 2026-04-22 09:35:59,625 | WARNING  | found no corresponding commands to process id(s)
[2026-04-22 05:36:30] 2026-04-22 09:35:59,627 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-22 05:36:30] 2026-04-22 09:35:59,643 | INFO     | did not find any defunct processes belonging to 4174975
[2026-04-22 05:36:30] 2026-04-22 09:35:59,658 | INFO     | did not find any defunct processes belonging to 4174975
[2026-04-22 05:36:30] 2026-04-22 09:35:59,659 | INFO     | Ready for new job
[2026-04-22 05:36:30] 2026-04-22 09:35:59,661 | INFO     | **************************************
[2026-04-22 05:36:30] 2026-04-22 09:35:59,662 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-22 05:36:30] 2026-04-22 09:35:59,662 | INFO     | **************************************
[2026-04-22 05:36:30] 2026-04-22 09:35:59,662 | INFO     | 
[2026-04-22 05:36:30] 2026-04-22 09:35:59,664 | INFO     | architecture information:
[2026-04-22 05:36:30] 2026-04-22 09:35:59,665 | INFO     | executing command: cat /etc/os-release
[2026-04-22 05:36:30] 2026-04-22 09:35:59,692 | INFO     | cat /etc/os-release:
[2026-04-22 05:36:30] NAME="CentOS Linux"
[2026-04-22 05:36:30] VERSION="7 (Core)"
[2026-04-22 05:36:30] ID="centos"
[2026-04-22 05:36:30] ID_LIKE="rhel fedora"
[2026-04-22 05:36:30] VERSION_ID="7"
[2026-04-22 05:36:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-22 05:36:30] ANSI_COLOR="0;31"
[2026-04-22 05:36:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-22 05:36:30] HOME_URL="https://www.centos.org/"
[2026-04-22 05:36:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-22 05:36:30] 
[2026-04-22 05:36:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-22 05:36:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-22 05:36:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-22 05:36:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-22 05:36:30] 
[2026-04-22 05:36:30] 2026-04-22 09:35:59,693 | INFO     | **************************************
[2026-04-22 05:36:30] 2026-04-22 09:36:00,195 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-04-22 05:36:30] 2026-04-22 09:36:00,212 | INFO     | sufficient remaining disk space (72353841152 B)
[2026-04-22 05:36:30] 2026-04-22 09:36:00,213 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-22 05:36:30] 2026-04-22 09:36:00,213 | INFO     | current server update state: UPDATING_FINAL
[2026-04-22 05:36:30] 2026-04-22 09:36:00,213 | INFO     | update_server=False
[2026-04-22 05:36:30] 2026-04-22 09:36:00,213 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-22 05:36:30] 2026-04-22 09:36:00,214 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-22 05:36:30] 2026-04-22 09:36:00,214 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-22 05:36:30] 2026-04-22 09:36:00,214 | INFO     | aborting loop
[2026-04-22 05:36:30] 2026-04-22 09:36:00,823 | INFO     | all data control threads have been joined
[2026-04-22 05:36:30] 2026-04-22 09:36:00,932 | INFO     | all payload control threads have been joined
[2026-04-22 05:36:30] 2026-04-22 09:36:01,220 | INFO     | [job] retrieve thread has finished
[2026-04-22 05:36:30] 2026-04-22 09:36:01,221 | INFO     | [job] job monitor thread has finished
[2026-04-22 05:36:30] 2026-04-22 09:36:01,274 | INFO     | all job control threads have been joined
[2026-04-22 05:36:30] 2026-04-22 09:36:01,284 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-22 05:36:30] 2026-04-22 09:36:01,334 | INFO     | [data] copytool_in thread has finished
[2026-04-22 05:36:30] 2026-04-22 09:36:01,389 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-22 05:36:30] 2026-04-22 09:36:01,413 | INFO     | [job] validate thread has finished
[2026-04-22 05:36:30] 2026-04-22 09:36:01,720 | INFO     | [payload] execute_payloads thread has finished
[2026-04-22 05:36:30] 2026-04-22 09:36:01,831 | INFO     | [data] control thread has finished
[2026-04-22 05:36:30] 2026-04-22 09:36:01,938 | INFO     | [payload] control thread has finished
[2026-04-22 05:36:30] 2026-04-22 09:36:02,219 | INFO     | [data] copytool_out thread has finished
[2026-04-22 05:36:30] 2026-04-22 09:36:02,279 | INFO     | [job] control thread has finished
[2026-04-22 05:36:30] 2026-04-22 09:36:02,537 | INFO     | [payload] validate_pre thread has finished
[2026-04-22 05:36:30] 2026-04-22 09:36:02,559 | INFO     | [job] create_data_payload thread has finished
[2026-04-22 05:36:30] 2026-04-22 09:36:02,646 | INFO     | [payload] failed_post thread has finished
[2026-04-22 05:36:30] 2026-04-22 09:36:02,693 | INFO     | [payload] validate_post thread has finished
[2026-04-22 05:36:30] 2026-04-22 09:36:02,951 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-22 05:36:30] 2026-04-22 09:36:03,957 | INFO     | [job] queue monitor thread has finished
[2026-04-22 05:36:30] 2026-04-22 09:36:05,400 | INFO     | [data] queue_monitor thread has finished
[2026-04-22 05:36:30] 2026-04-22 09:36:09,975 | INFO     | [monitor] cgroup control has ended
[2026-04-22 05:36:30] 2026-04-22 09:36:11,568 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140464249628480)>', '<ExcThread(monitor, started 140463968630528)>']
[2026-04-22 05:36:30] 2026-04-22 09:36:16,593 | INFO     | all workflow threads have been joined
[2026-04-22 05:36:30] 2026-04-22 09:36:16,593 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-22 05:36:30] 2026-04-22 09:36:16,594 | INFO     | traces error code: 0
[2026-04-22 05:36:30] 2026-04-22 09:36:16,594 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-22 05:36:30] 2026-04-22 09:36:29,615 | INFO     | PID=4165439 has CPU usage=9.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-22 05:36:30] 2026-04-22 09:36:29,616 | INFO     | .. there are 26 such processes running
[2026-04-22 05:36:30] 2026-04-22 09:36:29,617 | INFO     | found 0 job(s) in 20 queues
[2026-04-22 05:36:30] 2026-04-22 09:36:29,617 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-22 05:36:30] 2026-04-22 09:36:29,617 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-22 05:36:30] 2026-04-22 09:36:29,618 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-22 05:36:30] 2026-04-22 09:36:29,618 | INFO     | [monitor] control thread has ended
[2026-04-22 05:36:30] 2026-04-22 09:36:29,795 [wrapper] ==== pilot stdout END ====
[2026-04-22 05:36:30] 2026-04-22 09:36:29,798 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-22 05:36:30] 2026-04-22 09:36:29,800 [wrapper] pilotpid: 4165439
[2026-04-22 05:36:30] 2026-04-22 09:36:29,805 [wrapper] Pilot exit status: 0
[2026-04-22 05:36:30] 2026-04-22 09:36:29,824 [wrapper] pandaids: 7105514962
[2026-04-22 05:36:30] 2026-04-22 09:36:29,898 [wrapper] cleanup supervisor_pilot 1622401 4165440
[2026-04-22 05:36:30] 2026-04-22 09:36:29,902 [wrapper] Test setup, not cleaning
[2026-04-22 05:36:30] 2026-04-22 09:36:29,906 [wrapper] apfmon messages muted
[2026-04-22 05:36:30] 2026-04-22 09:36:29,910 [wrapper] ==== wrapper stdout END ====
[2026-04-22 05:36:30] 2026-04-22 09:36:29,914 [wrapper] ==== wrapper stderr END ====
[2026-04-22 05:36:30]  *** Error codes and diagnostics ***
[2026-04-22 05:36:30]     "exeErrorCode": 0,
[2026-04-22 05:36:30]     "pilotErrorCode": 0,
[2026-04-22 05:36:30]  *** Listing of results directory ***
[2026-04-22 05:36:30] total 2476908
[2026-04-22 05:36:30] -rwx------. 1 boincer umatlas      36322 Apr 21 07:22 runpilot2-wrapper.sh
[2026-04-22 05:36:30] -rw-r--r--. 1 boincer umatlas     644190 Apr 21 13:04 pilot3.tar.gz
[2026-04-22 05:36:30] -rw-r--r--. 1 boincer umatlas       5094 Apr 21 13:27 queuedata.json
[2026-04-22 05:36:30] -rw-r--r--. 1 boincer umatlas        100 Apr 21 20:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-22 05:36:30] -rwxr-xr-x. 1 boincer umatlas       7986 Apr 21 20:57 run_atlas
[2026-04-22 05:36:30] -rw-r--r--. 1 boincer umatlas        105 Apr 21 20:57 job.xml
[2026-04-22 05:36:30] -rw-r--r--. 2 boincer umatlas 2247878637 Apr 21 20:57 EVNT.49820373._000049.pool.root.1
[2026-04-22 05:36:30] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 20:57 start_atlas.sh
[2026-04-22 05:36:30] drwxrwx--x. 2 boincer umatlas       4096 Apr 21 20:57 shared
[2026-04-22 05:36:30] -rw-r--r--. 2 boincer umatlas     656939 Apr 21 20:57 input.tar.gz
[2026-04-22 05:36:30] -rw-r--r--. 1 boincer umatlas          0 Apr 21 20:57 boinc_lockfile
[2026-04-22 05:36:30] -rw-r--r--. 1 boincer umatlas       2585 Apr 21 20:57 pandaJob.out
[2026-04-22 05:36:30] -rw-------. 1 boincer umatlas         57 Apr 21 20:57 setup.sh.local
[2026-04-22 05:36:30] -rw-------. 1 boincer umatlas     997058 Apr 21 20:58 agis_schedconf.cvmfs.json
[2026-04-22 05:36:30] -rw-------. 1 boincer umatlas        432 Apr 21 20:59 workernode_map.json
[2026-04-22 05:36:30] drwx------. 5 boincer umatlas       4096 Apr 21 20:59 pilot3
[2026-04-22 05:36:30] -rw-r--r--. 1 boincer umatlas       6623 Apr 22 05:28 init_data.xml
[2026-04-22 05:36:30] -rw-------. 1 boincer umatlas  278391963 Apr 22 05:35 HITS.49820375._011684.pool.root.1
[2026-04-22 05:36:30] -rw-r--r--. 1 boincer umatlas        489 Apr 22 05:35 boinc_task_state.xml
[2026-04-22 05:36:30] -rw-------. 1 boincer umatlas       1069 Apr 22 05:35 memory_monitor_summary.json
[2026-04-22 05:36:30] -rw-------. 1 boincer umatlas    1509089 Apr 22 05:35 agis_ddmendpoints.agis.ALL.json
[2026-04-22 05:36:30] -rw-------. 1 boincer umatlas     519671 Apr 22 05:35 log.49820375._011684.job.log.tgz.1
[2026-04-22 05:36:30] -rw-------. 1 boincer umatlas       6415 Apr 22 05:35 heartbeat_new.json
[2026-04-22 05:36:30] -rw-------. 1 boincer umatlas       6306 Apr 22 05:35 heartbeat.json
[2026-04-22 05:36:30] -rw-r--r--. 1 boincer umatlas         28 Apr 22 05:36 wrapper_checkpoint.txt
[2026-04-22 05:36:30] -rw-r--r--. 1 boincer umatlas       8192 Apr 22 05:36 boinc_mmap_file
[2026-04-22 05:36:30] -rw-------. 1 boincer umatlas         95 Apr 22 05:36 pilot_heartbeat.json
[2026-04-22 05:36:30] -rw-------. 1 boincer umatlas        823 Apr 22 05:36 pilotlog.txt
[2026-04-22 05:36:30] -rw-------. 1 boincer umatlas    2495235 Apr 22 05:36 log.49820375._011684.job.log.1
[2026-04-22 05:36:30] -rw-------. 1 boincer umatlas        357 Apr 22 05:36 output.list
[2026-04-22 05:36:30] -rw-r--r--. 1 boincer umatlas        410 Apr 22 05:36 runtime_log
[2026-04-22 05:36:30] -rw-------. 1 boincer umatlas    3031040 Apr 22 05:36 result.tar.gz
[2026-04-22 05:36:30] -rw-r--r--. 1 boincer umatlas       8949 Apr 22 05:36 runtime_log.err
[2026-04-22 05:36:30] -rw-------. 1 boincer umatlas        659 Apr 22 05:36 5dcd0d597f84.diag
[2026-04-22 05:36:30] -rw-r--r--. 1 boincer umatlas      21299 Apr 22 05:36 stderr.txt
[2026-04-22 05:36:30] HITS file was successfully produced:
[2026-04-22 05:36:30] -rw-------. 1 boincer umatlas 278391963 Apr 22 05:35 shared/HITS.pool.root.1
[2026-04-22 05:36:30]  *** Contents of shared directory: ***
[2026-04-22 05:36:30] total 2470692
[2026-04-22 05:36:30] -rw-r--r--. 2 boincer umatlas 2247878637 Apr 21 20:57 ATLAS.root_0
[2026-04-22 05:36:30] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 20:57 start_atlas.sh
[2026-04-22 05:36:30] -rw-r--r--. 2 boincer umatlas     656939 Apr 21 20:57 input.tar.gz
[2026-04-22 05:36:30] -rw-------. 1 boincer umatlas  278391963 Apr 22 05:35 HITS.pool.root.1
[2026-04-22 05:36:30] -rw-------. 1 boincer umatlas    3031040 Apr 22 05:36 result.tar.gz
05:36:31 (4157397): run_atlas exited; CPU time 89689.791256
05:36:31 (4157397): called boinc_finish(0)

</stderr_txt>
]]>

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