Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
20:26:31 (1840492): wrapper (7.7.26015): starting
20:26:31 (1840492): wrapper: running run_atlas (--nthreads 4)
[2026-04-23 20:26:31] Arguments: --nthreads 4
[2026-04-23 20:26:31] Threads: 4
[2026-04-23 20:26:31] Checking for CVMFS
[2026-04-23 20:26:31] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-23 20:26:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-23 20:26:32] Running cvmfs_config stat atlas.cern.ch
[2026-04-23 20:26:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-23 20:26:32] 2.13.3.0 9275 2831 58100 158781 2 50 5825400 6144000 0 130560 0 897271 99.966 118829 3670 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.42:3128 1
[2026-04-23 20:26:32] CVMFS is ok
[2026-04-23 20:26:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-23 20:26:32] Checking for apptainer binary...
[2026-04-23 20:26:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-23 20:26:32] Running /usr/bin/apptainer --version
[2026-04-23 20:26:32] apptainer version 1.4.5
[2026-04-23 20:26:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-23 20:26:32] TS-P310
[2026-04-23 20:26:32] apptainer works
[2026-04-23 20:26:32] Set ATHENA_PROC_NUMBER=4
[2026-04-23 20:26:32] Set ATHENA_CORE_NUMBER=4
[2026-04-23 20:26:32] Starting ATLAS job with PandaID=7105336493
[2026-04-23 20:26:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc2/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-23 22:44:03]  *** The last 200 lines of the pilot log: ***
[2026-04-23 22:44:03] 2026-04-23 20:43:02,741 | WARNING  | process 1849831 can no longer be monitored (due to stat problems) - aborting
[2026-04-23 22:44:03] 2026-04-23 20:43:02,741 | INFO     | using path: /var/lib/boinc2/slots/0/PanDA_Pilot-7105336493/memory_monitor_summary.json (trf name=prmon)
[2026-04-23 22:44:03] 2026-04-23 20:43:02,799 | INFO     | number of running child processes to parent process 1849831: 1
[2026-04-23 22:44:03] 2026-04-23 20:43:02,799 | INFO     | maximum number of monitored processes: 6
[2026-04-23 22:44:03] 2026-04-23 20:43:04,259 | INFO     | job 7105336493 has state=finished
[2026-04-23 22:44:03] 2026-04-23 20:43:04,259 | INFO     | preparing for final server update for job 7105336493 in state='finished'
[2026-04-23 22:44:03] 2026-04-23 20:43:04,259 | INFO     | reading metadata from: /var/lib/boinc2/slots/0/PanDA_Pilot-7105336493/jobReport.json
[2026-04-23 22:44:03] 2026-04-23 20:43:04,261 | INFO     | added worker_node to metadata from /var/lib/boinc2/slots/0/workernode_map.json
[2026-04-23 22:44:03] 2026-04-23 20:43:04,261 | INFO     | this job has now completed (state=finished)
[2026-04-23 22:44:03] 2026-04-23 20:43:04,262 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-23 22:44:03] 2026-04-23 20:43:04,262 | INFO     | log transfer has been attempted: DONE
[2026-04-23 22:44:03] 2026-04-23 20:43:04,262 | INFO     | job 7105336493 has finished - writing final server update
[2026-04-23 22:44:03] 2026-04-23 20:43:04,262 | INFO     | total number of processed events: 400 (read)
[2026-04-23 22:44:03] 2026-04-23 20:43:04,264 | INFO     | using path: /var/lib/boinc2/slots/0/PanDA_Pilot-7105336493/memory_monitor_summary.json (trf name=prmon)
[2026-04-23 22:44:03] 2026-04-23 20:43:04,265 | INFO     | extracted standard info from prmon json
[2026-04-23 22:44:03] 2026-04-23 20:43:04,265 | INFO     | extracted standard memory fields from prmon json
[2026-04-23 22:44:03] 2026-04-23 20:43:04,265 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-23 22:44:03] 2026-04-23 20:43:04,265 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-23 22:44:03] 2026-04-23 20:43:04,267 | INFO     | fitting pss+swap vs Time
[2026-04-23 22:44:03] 2026-04-23 20:43:04,267 | INFO     | sum of square deviations: 746051197.5
[2026-04-23 22:44:03] 2026-04-23 20:43:04,268 | INFO     | sum of deviations: -26251894211.500004
[2026-04-23 22:44:03] 2026-04-23 20:43:04,268 | INFO     | mean x (centered): 0.0
[2026-04-23 22:44:03] 2026-04-23 20:43:04,268 | INFO     | mean y: 2508053.529850746
[2026-04-23 22:44:03] 2026-04-23 20:43:04,268 | INFO     | intersect: 2508053.529850746
[2026-04-23 22:44:03] 2026-04-23 20:43:04,268 | INFO     | chi2: 1.2089956335987746
[2026-04-23 22:44:03] 2026-04-23 20:43:04,268 | INFO     | sum of square deviations: 665612480.0
[2026-04-23 22:44:03] 2026-04-23 20:43:04,269 | INFO     | sum of deviations: -24217268400.000004
[2026-04-23 22:44:03] 2026-04-23 20:43:04,269 | INFO     | mean x (centered): 0.0
[2026-04-23 22:44:03] 2026-04-23 20:43:04,269 | INFO     | mean y: 2511912.7441860465
[2026-04-23 22:44:03] 2026-04-23 20:43:04,269 | INFO     | intersect: 2511912.7441860465
[2026-04-23 22:44:03] 2026-04-23 20:43:04,269 | INFO     | chi2: 1.204792186206412
[2026-04-23 22:44:03] 2026-04-23 20:43:04,269 | INFO     | current chi2=1.204792186206412 (change=0.3476809407367681 %)
[2026-04-23 22:44:03] 2026-04-23 20:43:04,269 | INFO     | right removable region: 128
[2026-04-23 22:44:03] 2026-04-23 20:43:04,269 | INFO     | sum of square deviations: 665612480.0
[2026-04-23 22:44:03] 2026-04-23 20:43:04,270 | INFO     | sum of deviations: -36270266939.99999
[2026-04-23 22:44:03] 2026-04-23 20:43:04,270 | INFO     | mean x (centered): 0.0
[2026-04-23 22:44:03] 2026-04-23 20:43:04,270 | INFO     | mean y: 2526346.1472868216
[2026-04-23 22:44:03] 2026-04-23 20:43:04,270 | INFO     | intersect: 2526346.1472868216
[2026-04-23 22:44:03] 2026-04-23 20:43:04,270 | INFO     | chi2: 0.12195032887011255
[2026-04-23 22:44:03] 2026-04-23 20:43:04,270 | INFO     | current chi2=0.12195032887011255 (change=89.91308773323628 %)
[2026-04-23 22:44:03] 2026-04-23 20:43:04,271 | INFO     | sum of square deviations: 591173875.0
[2026-04-23 22:44:03] 2026-04-23 20:43:04,271 | INFO     | sum of deviations: -31161743555.0
[2026-04-23 22:44:03] 2026-04-23 20:43:04,271 | INFO     | mean x (centered): 0.0
[2026-04-23 22:44:03] 2026-04-23 20:43:04,271 | INFO     | mean y: 2515872.9838709678
[2026-04-23 22:44:03] 2026-04-23 20:43:04,271 | INFO     | intersect: 2515872.9838709678
[2026-04-23 22:44:03] 2026-04-23 20:43:04,271 | INFO     | chi2: 0.11923136152977792
[2026-04-23 22:44:03] 2026-04-23 20:43:04,272 | INFO     | current chi2=0.11923136152977792 (change=2.2295695022114743 %)
[2026-04-23 22:44:03] 2026-04-23 20:43:04,272 | INFO     | left removable region: 10
[2026-04-23 22:44:03] 2026-04-23 20:43:04,272 | INFO     | sum of square deviations: 509440249.5
[2026-04-23 22:44:03] 2026-04-23 20:43:04,272 | INFO     | sum of deviations: -28724080343.000004
[2026-04-23 22:44:03] 2026-04-23 20:43:04,272 | INFO     | mean x (centered): 0.0
[2026-04-23 22:44:03] 2026-04-23 20:43:04,272 | INFO     | mean y: 2521335.3898305083
[2026-04-23 22:44:03] 2026-04-23 20:43:04,272 | INFO     | intersect: 2521335.3898305083
[2026-04-23 22:44:03] 2026-04-23 20:43:04,273 | INFO     | chi2: 0.11162576794357326
[2026-04-23 22:44:03] 2026-04-23 20:43:04,273 | INFO     | current memory leak: -56.38 B/s (using 118 data points, chi2=0.11)
[2026-04-23 22:44:03] 2026-04-23 20:43:04,273 | INFO     | could have reported an average CPU frequency of 3700 MHz (8 samples)
[2026-04-23 22:44:03] 2026-04-23 20:43:04,273 | INFO     | ..............................
[2026-04-23 22:44:03] 2026-04-23 20:43:04,273 | INFO     | . Timing measurements:
[2026-04-23 22:44:03] 2026-04-23 20:43:04,274 | INFO     | . get job = 0 s
[2026-04-23 22:44:03] 2026-04-23 20:43:04,274 | INFO     | . initial setup = 3 s
[2026-04-23 22:44:03] 2026-04-23 20:43:04,274 | INFO     | . payload setup = 5 s
[2026-04-23 22:44:03] 2026-04-23 20:43:04,274 | INFO     | . stage-in = 0 s
[2026-04-23 22:44:03] 2026-04-23 20:43:04,274 | INFO     | . payload execution = 8156 s
[2026-04-23 22:44:03] 2026-04-23 20:43:04,274 | INFO     | . stage-out = 0 s
[2026-04-23 22:44:03] 2026-04-23 20:43:04,274 | INFO     | . log creation = 0 s
[2026-04-23 22:44:03] 2026-04-23 20:43:04,274 | INFO     | ..............................
[2026-04-23 22:44:03] 2026-04-23 20:43:04,327 | INFO     | 
[2026-04-23 22:44:03] 2026-04-23 20:43:04,327 | INFO     | job summary report
[2026-04-23 22:44:03] 2026-04-23 20:43:04,327 | INFO     | --------------------------------------------------
[2026-04-23 22:44:03] 2026-04-23 20:43:04,327 | INFO     | PanDA job id: 7105336493
[2026-04-23 22:44:03] 2026-04-23 20:43:04,327 | INFO     | task id: 49545114
[2026-04-23 22:44:03] 2026-04-23 20:43:04,327 | INFO     | errors: (none)
[2026-04-23 22:44:03] 2026-04-23 20:43:04,327 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-23 22:44:03] 2026-04-23 20:43:04,327 | INFO     | pilot state: finished 
[2026-04-23 22:44:03] 2026-04-23 20:43:04,327 | INFO     | transexitcode: 0
[2026-04-23 22:44:03] 2026-04-23 20:43:04,327 | INFO     | exeerrorcode: 0
[2026-04-23 22:44:03] 2026-04-23 20:43:04,327 | INFO     | exeerrordiag: 
[2026-04-23 22:44:03] 2026-04-23 20:43:04,327 | INFO     | exitcode: 0
[2026-04-23 22:44:03] 2026-04-23 20:43:04,327 | INFO     | exitmsg: OK
[2026-04-23 22:44:03] 2026-04-23 20:43:04,327 | INFO     | cpuconsumptiontime: 30744 s
[2026-04-23 22:44:03] 2026-04-23 20:43:04,327 | INFO     | nevents: 400
[2026-04-23 22:44:03] 2026-04-23 20:43:04,327 | INFO     | neventsw: 0
[2026-04-23 22:44:03] 2026-04-23 20:43:04,327 | INFO     | pid: 1849831
[2026-04-23 22:44:03] 2026-04-23 20:43:04,327 | INFO     | pgrp: 1849831
[2026-04-23 22:44:03] 2026-04-23 20:43:04,328 | INFO     | corecount: 4
[2026-04-23 22:44:03] 2026-04-23 20:43:04,328 | INFO     | event service: False
[2026-04-23 22:44:03] 2026-04-23 20:43:04,328 | INFO     | sizes: {0: 2276504, 11: 2276504, 8166: 2313361, 8167: 2313361, 8168: 2313555}
[2026-04-23 22:44:03] 2026-04-23 20:43:04,328 | INFO     | --------------------------------------------------
[2026-04-23 22:44:03] 2026-04-23 20:43:04,328 | INFO     | 
[2026-04-23 22:44:03] 2026-04-23 20:43:04,328 | INFO     | executing command: ls -lF /var/lib/boinc2/slots/0
[2026-04-23 22:44:03] 2026-04-23 20:43:04,342 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-23 22:44:03] 2026-04-23 20:43:04,342 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-23 22:44:03] 2026-04-23 20:43:04,342 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-23 22:44:03] 2026-04-23 20:43:04,342 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-23 22:44:03] 2026-04-23 20:43:04,342 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-23 22:44:03] 2026-04-23 20:43:04,342 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-23 22:44:03] 2026-04-23 20:43:04,343 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-23 22:44:03] 2026-04-23 20:43:04,343 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-23 22:44:03] 2026-04-23 20:43:04,343 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-23 22:44:03] 2026-04-23 20:43:04,343 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-23 22:44:03] 2026-04-23 20:43:04,343 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-23 22:44:03] 2026-04-23 20:43:04,343 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-23 22:44:03] 2026-04-23 20:43:04,343 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-23 22:44:03] 2026-04-23 20:43:04,343 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-23 22:44:03] 2026-04-23 20:43:04,343 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-23 22:44:03] 2026-04-23 20:43:04,343 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-23 22:44:03] 2026-04-23 20:43:04,343 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-23 22:44:03] 2026-04-23 20:43:04,343 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-23 22:44:03] 2026-04-23 20:43:04,343 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-23 22:44:03] 2026-04-23 20:43:04,343 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-23 22:44:03] 2026-04-23 20:43:04,343 | INFO     | job 7105336493 has completed (purged errors)
[2026-04-23 22:44:03] 2026-04-23 20:43:04,343 | INFO     | overall cleanup function is called
[2026-04-23 22:44:03] 2026-04-23 20:43:05,349 | INFO     | --- collectZombieJob: --- 10, [1849831]
[2026-04-23 22:44:03] 2026-04-23 20:43:05,349 | INFO     | zombie collector waiting for pid 1849831
[2026-04-23 22:44:03] 2026-04-23 20:43:05,349 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-23 22:44:03] 2026-04-23 20:43:05,349 | INFO     | collected zombie processes
[2026-04-23 22:44:03] 2026-04-23 20:43:05,349 | INFO     | will attempt to kill all subprocesses of pid=1849831
[2026-04-23 22:44:03] 2026-04-23 20:43:05,420 | INFO     | process IDs to be killed: [1849831] (in reverse order)
[2026-04-23 22:44:03] 2026-04-23 20:43:05,449 | WARNING  | found no corresponding commands to process id(s)
[2026-04-23 22:44:03] 2026-04-23 20:43:05,450 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-23 22:44:03] 2026-04-23 20:43:05,452 | INFO     | did not find any defunct processes belonging to 1849831
[2026-04-23 22:44:03] 2026-04-23 20:43:05,454 | INFO     | did not find any defunct processes belonging to 1849831
[2026-04-23 22:44:03] 2026-04-23 20:43:05,455 | INFO     | Ready for new job
[2026-04-23 22:44:03] 2026-04-23 20:43:05,456 | INFO     | **************************************
[2026-04-23 22:44:03] 2026-04-23 20:43:05,456 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-23 22:44:03] 2026-04-23 20:43:05,456 | INFO     | **************************************
[2026-04-23 22:44:03] 2026-04-23 20:43:05,456 | INFO     | 
[2026-04-23 22:44:03] 2026-04-23 20:43:05,457 | INFO     | architecture information:
[2026-04-23 22:44:03] 2026-04-23 20:43:05,457 | INFO     | executing command: cat /etc/os-release
[2026-04-23 22:44:03] 2026-04-23 20:43:05,466 | INFO     | cat /etc/os-release:
[2026-04-23 22:44:03] NAME="CentOS Linux"
[2026-04-23 22:44:03] VERSION="7 (Core)"
[2026-04-23 22:44:03] ID="centos"
[2026-04-23 22:44:03] ID_LIKE="rhel fedora"
[2026-04-23 22:44:03] VERSION_ID="7"
[2026-04-23 22:44:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-23 22:44:03] ANSI_COLOR="0;31"
[2026-04-23 22:44:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-23 22:44:03] HOME_URL="https://www.centos.org/"
[2026-04-23 22:44:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-23 22:44:03] 
[2026-04-23 22:44:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-23 22:44:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-23 22:44:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-23 22:44:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-23 22:44:03] 
[2026-04-23 22:44:03] 2026-04-23 20:43:05,466 | INFO     | **************************************
[2026-04-23 22:44:03] 2026-04-23 20:43:05,968 | INFO     | executing command: df -mP /var/lib/boinc2/slots/0
[2026-04-23 22:44:03] 2026-04-23 20:43:05,976 | INFO     | sufficient remaining disk space (84869644288 B)
[2026-04-23 22:44:03] 2026-04-23 20:43:05,977 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-23 22:44:03] 2026-04-23 20:43:05,977 | INFO     | current server update state: UPDATING_FINAL
[2026-04-23 22:44:03] 2026-04-23 20:43:05,977 | INFO     | update_server=False
[2026-04-23 22:44:03] 2026-04-23 20:43:05,977 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-23 22:44:03] 2026-04-23 20:43:05,977 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-23 22:44:03] 2026-04-23 20:43:05,977 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-23 22:44:03] 2026-04-23 20:43:06,308 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-23 22:44:03] 2026-04-23 20:43:06,308 | INFO     | aborting loop
[2026-04-23 22:44:03] 2026-04-23 20:43:06,540 | INFO     | all data control threads have been joined
[2026-04-23 22:44:03] 2026-04-23 20:43:06,982 | INFO     | [job] queue monitor thread has finished
[2026-04-23 22:44:03] 2026-04-23 20:43:06,982 | INFO     | [job] retrieve thread has finished
[2026-04-23 22:44:03] 2026-04-23 20:43:07,009 | INFO     | [payload] execute_payloads thread has finished
[2026-04-23 22:44:03] 2026-04-23 20:43:07,142 | INFO     | all payload control threads have been joined
[2026-04-23 22:44:03] 2026-04-23 20:43:07,150 | INFO     | [job] create_data_payload thread has finished
[2026-04-23 22:44:03] 2026-04-23 20:43:07,153 | INFO     | [data] copytool_in thread has finished
[2026-04-23 22:44:03] 2026-04-23 20:43:07,230 | INFO     | all job control threads have been joined
[2026-04-23 22:44:03] 2026-04-23 20:43:07,231 | INFO     | [payload] validate_pre thread has finished
[2026-04-23 22:44:03] 2026-04-23 20:43:07,313 | INFO     | [job] job monitor thread has finished
[2026-04-23 22:44:03] 2026-04-23 20:43:07,364 | INFO     | [payload] validate_post thread has finished
[2026-04-23 22:44:03] 2026-04-23 20:43:07,545 | INFO     | [data] control thread has finished
[2026-04-23 22:44:03] 2026-04-23 20:43:07,634 | INFO     | [job] validate thread has finished
[2026-04-23 22:44:03] 2026-04-23 20:43:07,820 | INFO     | [payload] failed_post thread has finished
[2026-04-23 22:44:03] 2026-04-23 20:43:07,984 | INFO     | [data] copytool_out thread has finished
[2026-04-23 22:44:03] 2026-04-23 20:43:08,147 | INFO     | [payload] control thread has finished
[2026-04-23 22:44:03] 2026-04-23 20:43:08,235 | INFO     | [job] control thread has finished
[2026-04-23 22:44:03] 2026-04-23 20:43:08,693 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-23 22:44:03] 2026-04-23 20:43:12,698 | INFO     | [data] queue_monitor thread has finished
[2026-04-23 22:44:03] 2026-04-23 20:43:16,998 | INFO     | job.realtimelogging is not enabled
[2026-04-23 22:44:03] 2026-04-23 20:43:18,003 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-23 22:44:03] 2026-04-23 20:43:36,618 | INFO     | PID=1844836 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-23 22:44:03] 2026-04-23 20:43:36,618 | INFO     | found 0 job(s) in 20 queues
[2026-04-23 22:44:03] 2026-04-23 20:43:36,618 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-23 22:44:03] 2026-04-23 20:43:36,618 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-23 22:44:03] 2026-04-23 20:43:57,852 | INFO     | [monitor] cgroup control has ended
[2026-04-23 22:44:03] 2026-04-23 20:43:58,261 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140548575160128)>', '<ExcThread(monitor, started 140548073568000)>']
[2026-04-23 22:44:03] 2026-04-23 20:43:58,728 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-23 22:44:03] 2026-04-23 20:43:58,728 | INFO     | [monitor] control thread has ended
[2026-04-23 22:44:03] 2026-04-23 20:44:03,286 | INFO     | all workflow threads have been joined
[2026-04-23 22:44:03] 2026-04-23 20:44:03,286 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-23 22:44:03] 2026-04-23 20:44:03,286 | INFO     | traces error code: 0
[2026-04-23 22:44:03] 2026-04-23 20:44:03,286 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-23 22:44:03] 2026-04-23 20:44:03,369 [wrapper] ==== pilot stdout END ====
[2026-04-23 22:44:03] 2026-04-23 20:44:03,371 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-23 22:44:03] 2026-04-23 20:44:03,373 [wrapper] pilotpid: 1844836
[2026-04-23 22:44:03] 2026-04-23 20:44:03,375 [wrapper] Pilot exit status: 0
[2026-04-23 22:44:03] 2026-04-23 20:44:03,382 [wrapper] pandaids: 7105336493
[2026-04-23 22:44:03] 2026-04-23 20:44:03,400 [wrapper] cleanup supervisor_pilot 2160015 1844837
[2026-04-23 22:44:03] 2026-04-23 20:44:03,403 [wrapper] Test setup, not cleaning
[2026-04-23 22:44:03] 2026-04-23 20:44:03,405 [wrapper] apfmon messages muted
[2026-04-23 22:44:03] 2026-04-23 20:44:03,407 [wrapper] ==== wrapper stdout END ====
[2026-04-23 22:44:03] 2026-04-23 20:44:03,409 [wrapper] ==== wrapper stderr END ====
[2026-04-23 22:44:03]  *** Error codes and diagnostics ***
[2026-04-23 22:44:03]     "exeErrorCode": 0,
[2026-04-23 22:44:03]     "pilotErrorCode": 0,
[2026-04-23 22:44:03]  *** Listing of results directory ***
[2026-04-23 22:44:03] insgesamt 462184
[2026-04-23 22:44:03] -rwx------ 1 boinc boinc     36322 21. Apr 13:20 runpilot2-wrapper.sh
[2026-04-23 22:44:03] -rw-r--r-- 1 boinc boinc    644190 21. Apr 19:04 pilot3.tar.gz
[2026-04-23 22:44:03] -rw-r--r-- 1 boinc boinc      5094 21. Apr 19:27 queuedata.json
[2026-04-23 22:44:03] -rw-r--r-- 1 boinc boinc       100 23. Apr 20:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-23 22:44:03] -rwxr-xr-x 1 boinc boinc      7986 23. Apr 20:26 run_atlas
[2026-04-23 22:44:03] -rw-r--r-- 1 boinc boinc       105 23. Apr 20:26 job.xml
[2026-04-23 22:44:03] -rw-r--r-- 2 boinc boinc 276923662 23. Apr 20:26 EVNT.49539591._000454.pool.root.1
[2026-04-23 22:44:03] drwxrwx--x 2 boinc boinc      4096 23. Apr 20:26 shared
[2026-04-23 22:44:03] -rw-r--r-- 2 boinc boinc    656950 23. Apr 20:26 input.tar.gz
[2026-04-23 22:44:03] -rw-r--r-- 2 boinc boinc     15665 23. Apr 20:26 start_atlas.sh
[2026-04-23 22:44:03] -rw-r--r-- 1 boinc boinc         0 23. Apr 20:26 boinc_setup_complete
[2026-04-23 22:44:03] -rw-r--r-- 1 boinc boinc      6698 23. Apr 20:26 init_data.xml
[2026-04-23 22:44:03] -rw-r--r-- 1 boinc boinc         0 23. Apr 20:26 boinc_lockfile
[2026-04-23 22:44:03] -rw-r--r-- 1 boinc boinc      2606 23. Apr 20:26 pandaJob.out
[2026-04-23 22:44:03] -rw------- 1 boinc boinc        52 23. Apr 20:26 setup.sh.local
[2026-04-23 22:44:03] -rw------- 1 boinc boinc    997872 23. Apr 20:26 agis_schedconf.cvmfs.json
[2026-04-23 22:44:03] -rw------- 1 boinc boinc   1509089 23. Apr 20:26 agis_ddmendpoints.agis.ALL.json
[2026-04-23 22:44:03] -rw------- 1 boinc boinc       413 23. Apr 20:26 workernode_map.json
[2026-04-23 22:44:03] drwx------ 5 boinc boinc      4096 23. Apr 20:26 pilot3
[2026-04-23 22:44:03] -rw------- 1 boinc boinc 190239342 23. Apr 22:42 HITS.49545114._033963.pool.root.1
[2026-04-23 22:44:03] -rw-r--r-- 1 boinc boinc       487 23. Apr 22:42 boinc_task_state.xml
[2026-04-23 22:44:03] -rw------- 1 boinc boinc      1014 23. Apr 22:42 memory_monitor_summary.json
[2026-04-23 22:44:03] -rw------- 1 boinc boinc    262223 23. Apr 22:43 log.49545114._033963.job.log.tgz.1
[2026-04-23 22:44:03] -rw------- 1 boinc boinc      6313 23. Apr 22:43 heartbeat_new.json
[2026-04-23 22:44:03] -rw------- 1 boinc boinc      6204 23. Apr 22:43 heartbeat.json
[2026-04-23 22:44:03] -rw------- 1 boinc boinc        95 23. Apr 22:43 pilot_heartbeat.json
[2026-04-23 22:44:03] -rw-r--r-- 1 boinc boinc      8192 23. Apr 22:43 boinc_mmap_file
[2026-04-23 22:44:03] -rw-r--r-- 1 boinc boinc        27 23. Apr 22:43 wrapper_checkpoint.txt
[2026-04-23 22:44:03] -rw------- 1 boinc boinc      4816 23. Apr 22:44 pilotlog.txt
[2026-04-23 22:44:03] -rw------- 1 boinc boinc    761395 23. Apr 22:44 log.49545114._033963.job.log.1
[2026-04-23 22:44:03] -rw------- 1 boinc boinc       357 23. Apr 22:44 output.list
[2026-04-23 22:44:03] -rw-r--r-- 1 boinc boinc       410 23. Apr 22:44 runtime_log
[2026-04-23 22:44:03] -rw------- 1 boinc boinc   1044480 23. Apr 22:44 result.tar.gz
[2026-04-23 22:44:03] -rw-r--r-- 1 boinc boinc      8924 23. Apr 22:44 runtime_log.err
[2026-04-23 22:44:03] -rw------- 1 boinc boinc       648 23. Apr 22:44 5d78ee1edeec.diag
[2026-04-23 22:44:03] -rw-r--r-- 1 boinc boinc     20884 23. Apr 22:44 stderr.txt
[2026-04-23 22:44:03] HITS file was successfully produced:
[2026-04-23 22:44:03] -rw------- 1 boinc boinc 190239342 23. Apr 22:42 shared/HITS.pool.root.1
[2026-04-23 22:44:03]  *** Contents of shared directory: ***
[2026-04-23 22:44:03] insgesamt 457908
[2026-04-23 22:44:03] -rw-r--r-- 2 boinc boinc 276923662 23. Apr 20:26 ATLAS.root_0
[2026-04-23 22:44:03] -rw-r--r-- 2 boinc boinc    656950 23. Apr 20:26 input.tar.gz
[2026-04-23 22:44:03] -rw-r--r-- 2 boinc boinc     15665 23. Apr 20:26 start_atlas.sh
[2026-04-23 22:44:03] -rw------- 1 boinc boinc 190239342 23. Apr 22:42 HITS.pool.root.1
[2026-04-23 22:44:03] -rw------- 1 boinc boinc   1044480 23. Apr 22:44 result.tar.gz
22:44:05 (1840492): run_atlas exited; CPU time 30816.640247
22:44:05 (1840492): called boinc_finish(0)

</stderr_txt>
]]>

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