Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
13:43:57 (1013924): wrapper (7.7.26015): starting
13:43:57 (1013924): wrapper: running run_atlas (--nthreads 4)
[2026-04-23 13:43:57] Arguments: --nthreads 4
[2026-04-23 13:43:57] Threads: 4
[2026-04-23 13:43:57] Checking for CVMFS
[2026-04-23 13:43:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-23 13:43:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-23 13:43:58] Running cvmfs_config stat atlas.cern.ch
[2026-04-23 13:43:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-23 13:43:58] 2.13.3.0 9275 2428 55572 158762 0 50 5220010 6144000 0 130560 0 730749 99.962 99103 3560 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.42:3128 1
[2026-04-23 13:43:58] CVMFS is ok
[2026-04-23 13:43:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-23 13:43:58] Checking for apptainer binary...
[2026-04-23 13:43:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-23 13:43:58] Running /usr/bin/apptainer --version
[2026-04-23 13:43:58] apptainer version 1.4.5
[2026-04-23 13:43:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-23 13:43:58] TS-P310
[2026-04-23 13:43:58] apptainer works
[2026-04-23 13:43:58] Set ATHENA_PROC_NUMBER=4
[2026-04-23 13:43:58] Set ATHENA_CORE_NUMBER=4
[2026-04-23 13:43:58] Starting ATLAS job with PandaID=7105307689
[2026-04-23 13:43:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc2/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-23 15:55:29]  *** The last 200 lines of the pilot log: ***
[2026-04-23 15:55:29] 2026-04-23 13:54:24,726 | INFO     | monitor loop #590: job 0:7105307689 is in state 'finished'
[2026-04-23 15:55:29] 2026-04-23 13:54:24,726 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-23 15:55:29] 2026-04-23 13:54:25,005 | INFO     | job 7105307689 has state=finished
[2026-04-23 15:55:29] 2026-04-23 13:54:25,005 | INFO     | preparing for final server update for job 7105307689 in state='finished'
[2026-04-23 15:55:29] 2026-04-23 13:54:25,006 | INFO     | reading metadata from: /var/lib/boinc2/slots/0/PanDA_Pilot-7105307689/jobReport.json
[2026-04-23 15:55:29] 2026-04-23 13:54:25,007 | INFO     | added worker_node to metadata from /var/lib/boinc2/slots/0/workernode_map.json
[2026-04-23 15:55:29] 2026-04-23 13:54:25,008 | INFO     | this job has now completed (state=finished)
[2026-04-23 15:55:29] 2026-04-23 13:54:25,008 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-23 15:55:29] 2026-04-23 13:54:25,008 | INFO     | log transfer has been attempted: DONE
[2026-04-23 15:55:29] 2026-04-23 13:54:25,008 | INFO     | job 7105307689 has finished - writing final server update
[2026-04-23 15:55:29] 2026-04-23 13:54:25,008 | INFO     | total number of processed events: 400 (read)
[2026-04-23 15:55:29] 2026-04-23 13:54:25,010 | INFO     | using path: /var/lib/boinc2/slots/0/PanDA_Pilot-7105307689/memory_monitor_summary.json (trf name=prmon)
[2026-04-23 15:55:29] 2026-04-23 13:54:25,010 | INFO     | extracted standard info from prmon json
[2026-04-23 15:55:29] 2026-04-23 13:54:25,010 | INFO     | extracted standard memory fields from prmon json
[2026-04-23 15:55:29] 2026-04-23 13:54:25,010 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-23 15:55:29] 2026-04-23 13:54:25,010 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-23 15:55:29] 2026-04-23 13:54:25,011 | INFO     | fitting pss+swap vs Time
[2026-04-23 15:55:29] 2026-04-23 13:54:25,011 | INFO     | sum of square deviations: 650252192.0
[2026-04-23 15:55:29] 2026-04-23 13:54:25,012 | INFO     | sum of deviations: -18345932695.0
[2026-04-23 15:55:29] 2026-04-23 13:54:25,012 | INFO     | mean x (centered): 0.0
[2026-04-23 15:55:29] 2026-04-23 13:54:25,012 | INFO     | mean y: 2464153.765625
[2026-04-23 15:55:29] 2026-04-23 13:54:25,012 | INFO     | intersect: 2464153.765625
[2026-04-23 15:55:29] 2026-04-23 13:54:25,012 | INFO     | chi2: 1.2557669773834712
[2026-04-23 15:55:29] 2026-04-23 13:54:25,012 | INFO     | sum of square deviations: 576985702.0
[2026-04-23 15:55:29] 2026-04-23 13:54:25,012 | INFO     | sum of deviations: -17264770586.0
[2026-04-23 15:55:29] 2026-04-23 13:54:25,012 | INFO     | mean x (centered): 0.0
[2026-04-23 15:55:29] 2026-04-23 13:54:25,012 | INFO     | mean y: 2466405.2845528456
[2026-04-23 15:55:29] 2026-04-23 13:54:25,013 | INFO     | intersect: 2466405.2845528456
[2026-04-23 15:55:29] 2026-04-23 13:54:25,013 | INFO     | chi2: 1.2494186033553216
[2026-04-23 15:55:29] 2026-04-23 13:54:25,013 | INFO     | current chi2=1.2494186033553216 (change=0.5055375832048968 %)
[2026-04-23 15:55:29] 2026-04-23 13:54:25,013 | INFO     | right removable region: 122
[2026-04-23 15:55:29] 2026-04-23 13:54:25,013 | INFO     | sum of square deviations: 576985702.0
[2026-04-23 15:55:29] 2026-04-23 13:54:25,013 | INFO     | sum of deviations: -27100890168.0
[2026-04-23 15:55:29] 2026-04-23 13:54:25,013 | INFO     | mean x (centered): 0.0
[2026-04-23 15:55:29] 2026-04-23 13:54:25,013 | INFO     | mean y: 2481611.0081300815
[2026-04-23 15:55:29] 2026-04-23 13:54:25,013 | INFO     | intersect: 2481611.0081300815
[2026-04-23 15:55:29] 2026-04-23 13:54:25,013 | INFO     | chi2: 0.1779890639159749
[2026-04-23 15:55:29] 2026-04-23 13:54:25,013 | INFO     | current chi2=0.1779890639159749 (change=85.82626656684072 %)
[2026-04-23 15:55:29] 2026-04-23 13:54:25,013 | INFO     | sum of square deviations: 509440249.5
[2026-04-23 15:55:29] 2026-04-23 13:54:25,014 | INFO     | sum of deviations: -21540342814.0
[2026-04-23 15:55:29] 2026-04-23 13:54:25,014 | INFO     | mean x (centered): 0.0
[2026-04-23 15:55:29] 2026-04-23 13:54:25,014 | INFO     | mean y: 2469041.8983050846
[2026-04-23 15:55:29] 2026-04-23 13:54:25,014 | INFO     | intersect: 2469041.8983050846
[2026-04-23 15:55:29] 2026-04-23 13:54:25,014 | INFO     | chi2: 0.16380066486564263
[2026-04-23 15:55:29] 2026-04-23 13:54:25,014 | INFO     | current chi2=0.16380066486564263 (change=7.97150046085435 %)
[2026-04-23 15:55:29] 2026-04-23 13:54:25,014 | INFO     | left removable region: 10
[2026-04-23 15:55:29] 2026-04-23 13:54:25,014 | INFO     | sum of square deviations: 435610028.0
[2026-04-23 15:55:29] 2026-04-23 13:54:25,014 | INFO     | sum of deviations: -20238758485.999992
[2026-04-23 15:55:29] 2026-04-23 13:54:25,014 | INFO     | mean x (centered): 0.0
[2026-04-23 15:55:29] 2026-04-23 13:54:25,014 | INFO     | mean y: 2472270.9285714286
[2026-04-23 15:55:29] 2026-04-23 13:54:25,014 | INFO     | intersect: 2472270.9285714286
[2026-04-23 15:55:29] 2026-04-23 13:54:25,015 | INFO     | chi2: 0.1554146599503614
[2026-04-23 15:55:29] 2026-04-23 13:54:25,015 | INFO     | current memory leak: -46.46 B/s (using 112 data points, chi2=0.16)
[2026-04-23 15:55:29] 2026-04-23 13:54:25,015 | INFO     | could have reported an average CPU frequency of 3700 MHz (8 samples)
[2026-04-23 15:55:29] 2026-04-23 13:54:25,015 | INFO     | ..............................
[2026-04-23 15:55:29] 2026-04-23 13:54:25,015 | INFO     | . Timing measurements:
[2026-04-23 15:55:29] 2026-04-23 13:54:25,015 | INFO     | . get job = 0 s
[2026-04-23 15:55:29] 2026-04-23 13:54:25,015 | INFO     | . initial setup = 3 s
[2026-04-23 15:55:29] 2026-04-23 13:54:25,015 | INFO     | . payload setup = 5 s
[2026-04-23 15:55:29] 2026-04-23 13:54:25,015 | INFO     | . stage-in = 0 s
[2026-04-23 15:55:29] 2026-04-23 13:54:25,015 | INFO     | . payload execution = 7790 s
[2026-04-23 15:55:29] 2026-04-23 13:54:25,015 | INFO     | . stage-out = 0 s
[2026-04-23 15:55:29] 2026-04-23 13:54:25,015 | INFO     | . log creation = 0 s
[2026-04-23 15:55:29] 2026-04-23 13:54:25,015 | INFO     | ..............................
[2026-04-23 15:55:29] 2026-04-23 13:54:25,450 | INFO     | 
[2026-04-23 15:55:29] 2026-04-23 13:54:25,450 | INFO     | job summary report
[2026-04-23 15:55:29] 2026-04-23 13:54:25,450 | INFO     | --------------------------------------------------
[2026-04-23 15:55:29] 2026-04-23 13:54:25,450 | INFO     | PanDA job id: 7105307689
[2026-04-23 15:55:29] 2026-04-23 13:54:25,450 | INFO     | task id: 49545114
[2026-04-23 15:55:29] 2026-04-23 13:54:25,450 | INFO     | errors: (none)
[2026-04-23 15:55:29] 2026-04-23 13:54:25,450 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-23 15:55:29] 2026-04-23 13:54:25,450 | INFO     | pilot state: finished 
[2026-04-23 15:55:29] 2026-04-23 13:54:25,450 | INFO     | transexitcode: 0
[2026-04-23 15:55:29] 2026-04-23 13:54:25,450 | INFO     | exeerrorcode: 0
[2026-04-23 15:55:29] 2026-04-23 13:54:25,451 | INFO     | exeerrordiag: 
[2026-04-23 15:55:29] 2026-04-23 13:54:25,451 | INFO     | exitcode: 0
[2026-04-23 15:55:29] 2026-04-23 13:54:25,451 | INFO     | exitmsg: OK
[2026-04-23 15:55:29] 2026-04-23 13:54:25,451 | INFO     | cpuconsumptiontime: 29257 s
[2026-04-23 15:55:29] 2026-04-23 13:54:25,451 | INFO     | nevents: 400
[2026-04-23 15:55:29] 2026-04-23 13:54:25,451 | INFO     | neventsw: 0
[2026-04-23 15:55:29] 2026-04-23 13:54:25,451 | INFO     | pid: 1023864
[2026-04-23 15:55:29] 2026-04-23 13:54:25,451 | INFO     | pgrp: 1023864
[2026-04-23 15:55:29] 2026-04-23 13:54:25,451 | INFO     | corecount: 4
[2026-04-23 15:55:29] 2026-04-23 13:54:25,451 | INFO     | event service: False
[2026-04-23 15:55:29] 2026-04-23 13:54:25,451 | INFO     | sizes: {0: 2274697, 1: 2276526, 11: 2276526, 7799: 2304268, 7800: 2313268, 7801: 2313324, 7804: 2313646}
[2026-04-23 15:55:29] 2026-04-23 13:54:25,451 | INFO     | --------------------------------------------------
[2026-04-23 15:55:29] 2026-04-23 13:54:25,451 | INFO     | 
[2026-04-23 15:55:29] 2026-04-23 13:54:25,451 | INFO     | executing command: ls -lF /var/lib/boinc2/slots/0
[2026-04-23 15:55:29] 2026-04-23 13:54:25,463 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-23 15:55:29] 2026-04-23 13:54:25,463 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-23 15:55:29] 2026-04-23 13:54:25,464 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-23 15:55:29] 2026-04-23 13:54:25,464 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-23 15:55:29] 2026-04-23 13:54:25,464 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-23 15:55:29] 2026-04-23 13:54:25,464 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-23 15:55:29] 2026-04-23 13:54:25,464 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-23 15:55:29] 2026-04-23 13:54:25,464 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-23 15:55:29] 2026-04-23 13:54:25,464 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-23 15:55:29] 2026-04-23 13:54:25,464 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-23 15:55:29] 2026-04-23 13:54:25,464 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-23 15:55:29] 2026-04-23 13:54:25,464 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-23 15:55:29] 2026-04-23 13:54:25,464 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-23 15:55:29] 2026-04-23 13:54:25,464 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-23 15:55:29] 2026-04-23 13:54:25,465 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-23 15:55:29] 2026-04-23 13:54:25,465 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-23 15:55:29] 2026-04-23 13:54:25,465 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-23 15:55:29] 2026-04-23 13:54:25,465 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-23 15:55:29] 2026-04-23 13:54:25,465 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-23 15:55:29] 2026-04-23 13:54:25,465 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-23 15:55:29] 2026-04-23 13:54:25,465 | INFO     | job 7105307689 has completed (purged errors)
[2026-04-23 15:55:29] 2026-04-23 13:54:25,465 | INFO     | overall cleanup function is called
[2026-04-23 15:55:29] 2026-04-23 13:54:26,472 | INFO     | --- collectZombieJob: --- 10, [1023864]
[2026-04-23 15:55:29] 2026-04-23 13:54:26,472 | INFO     | zombie collector waiting for pid 1023864
[2026-04-23 15:55:29] 2026-04-23 13:54:26,472 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-23 15:55:29] 2026-04-23 13:54:26,472 | INFO     | collected zombie processes
[2026-04-23 15:55:29] 2026-04-23 13:54:26,472 | INFO     | will attempt to kill all subprocesses of pid=1023864
[2026-04-23 15:55:29] 2026-04-23 13:54:26,545 | INFO     | process IDs to be killed: [1023864] (in reverse order)
[2026-04-23 15:55:29] 2026-04-23 13:54:26,572 | WARNING  | found no corresponding commands to process id(s)
[2026-04-23 15:55:29] 2026-04-23 13:54:26,572 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-23 15:55:29] 2026-04-23 13:54:26,575 | INFO     | did not find any defunct processes belonging to 1023864
[2026-04-23 15:55:29] 2026-04-23 13:54:26,577 | INFO     | did not find any defunct processes belonging to 1023864
[2026-04-23 15:55:29] 2026-04-23 13:54:26,577 | INFO     | Ready for new job
[2026-04-23 15:55:29] 2026-04-23 13:54:26,578 | INFO     | **************************************
[2026-04-23 15:55:29] 2026-04-23 13:54:26,578 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-23 15:55:29] 2026-04-23 13:54:26,578 | INFO     | **************************************
[2026-04-23 15:55:29] 2026-04-23 13:54:26,578 | INFO     | 
[2026-04-23 15:55:29] 2026-04-23 13:54:26,578 | INFO     | architecture information:
[2026-04-23 15:55:29] 2026-04-23 13:54:26,579 | INFO     | executing command: cat /etc/os-release
[2026-04-23 15:55:29] 2026-04-23 13:54:26,587 | INFO     | cat /etc/os-release:
[2026-04-23 15:55:29] NAME="CentOS Linux"
[2026-04-23 15:55:29] VERSION="7 (Core)"
[2026-04-23 15:55:29] ID="centos"
[2026-04-23 15:55:29] ID_LIKE="rhel fedora"
[2026-04-23 15:55:29] VERSION_ID="7"
[2026-04-23 15:55:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-23 15:55:29] ANSI_COLOR="0;31"
[2026-04-23 15:55:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-23 15:55:29] HOME_URL="https://www.centos.org/"
[2026-04-23 15:55:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-23 15:55:29] 
[2026-04-23 15:55:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-23 15:55:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-23 15:55:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-23 15:55:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-23 15:55:29] 
[2026-04-23 15:55:29] 2026-04-23 13:54:26,587 | INFO     | **************************************
[2026-04-23 15:55:29] 2026-04-23 13:54:27,090 | INFO     | executing command: df -mP /var/lib/boinc2/slots/0
[2026-04-23 15:55:29] 2026-04-23 13:54:27,098 | INFO     | sufficient remaining disk space (84775272448 B)
[2026-04-23 15:55:29] 2026-04-23 13:54:27,098 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-23 15:55:29] 2026-04-23 13:54:27,099 | INFO     | current server update state: UPDATING_FINAL
[2026-04-23 15:55:29] 2026-04-23 13:54:27,099 | INFO     | update_server=False
[2026-04-23 15:55:29] 2026-04-23 13:54:27,099 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-23 15:55:29] 2026-04-23 13:54:27,099 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-23 15:55:29] 2026-04-23 13:54:27,103 | INFO     | all payload control threads have been joined
[2026-04-23 15:55:29] 2026-04-23 13:54:27,119 | INFO     | all data control threads have been joined
[2026-04-23 15:55:29] 2026-04-23 13:54:27,229 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-23 15:55:29] 2026-04-23 13:54:27,229 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-23 15:55:29] 2026-04-23 13:54:27,229 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-23 15:55:29] 2026-04-23 13:54:27,229 | INFO     | will abort loop
[2026-04-23 15:55:29] 2026-04-23 13:54:28,013 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-23 15:55:29] 2026-04-23 13:54:28,014 | INFO     | all job control threads have been joined
[2026-04-23 15:55:29] 2026-04-23 13:54:28,104 | INFO     | [job] retrieve thread has finished
[2026-04-23 15:55:29] 2026-04-23 13:54:28,108 | INFO     | [payload] control thread has finished
[2026-04-23 15:55:29] 2026-04-23 13:54:28,124 | INFO     | [data] control thread has finished
[2026-04-23 15:55:29] 2026-04-23 13:54:28,234 | INFO     | [job] job monitor thread has finished
[2026-04-23 15:55:29] 2026-04-23 13:54:28,450 | INFO     | [payload] execute_payloads thread has finished
[2026-04-23 15:55:29] 2026-04-23 13:54:28,455 | INFO     | [data] copytool_in thread has finished
[2026-04-23 15:55:29] 2026-04-23 13:54:28,478 | INFO     | [payload] failed_post thread has finished
[2026-04-23 15:55:29] 2026-04-23 13:54:29,004 | INFO     | [payload] validate_post thread has finished
[2026-04-23 15:55:29] 2026-04-23 13:54:29,019 | INFO     | [job] control thread has finished
[2026-04-23 15:55:29] 2026-04-23 13:54:29,104 | INFO     | [data] copytool_out thread has finished
[2026-04-23 15:55:29] 2026-04-23 13:54:29,301 | INFO     | [payload] validate_pre thread has finished
[2026-04-23 15:55:29] 2026-04-23 13:54:29,302 | INFO     | [job] validate thread has finished
[2026-04-23 15:55:29] 2026-04-23 13:54:29,360 | INFO     | [job] create_data_payload thread has finished
[2026-04-23 15:55:29] 2026-04-23 13:54:30,087 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-23 15:55:29] 2026-04-23 13:54:31,092 | INFO     | [job] queue monitor thread has finished
[2026-04-23 15:55:29] 2026-04-23 13:54:32,019 | INFO     | [data] queue_monitor thread has finished
[2026-04-23 15:55:29] 2026-04-23 13:54:37,530 | INFO     | job.realtimelogging is not enabled
[2026-04-23 15:55:29] 2026-04-23 13:54:38,535 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-23 15:55:29] 2026-04-23 13:54:57,662 | INFO     | PID=1018472 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-23 15:55:29] 2026-04-23 13:54:57,662 | INFO     | found 0 job(s) in 20 queues
[2026-04-23 15:55:29] 2026-04-23 13:54:57,662 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-23 15:55:29] 2026-04-23 13:54:57,662 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-23 15:55:29] 2026-04-23 13:55:22,743 | INFO     | [monitor] cgroup control has ended
[2026-04-23 15:55:29] 2026-04-23 13:55:24,795 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140688196601664)>', '<ExcThread(monitor, started 140687844546304)>']
[2026-04-23 15:55:29] 2026-04-23 13:55:24,798 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-23 15:55:29] 2026-04-23 13:55:24,798 | INFO     | [monitor] control thread has ended
[2026-04-23 15:55:29] 2026-04-23 13:55:29,820 | INFO     | all workflow threads have been joined
[2026-04-23 15:55:29] 2026-04-23 13:55:29,820 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-23 15:55:29] 2026-04-23 13:55:29,820 | INFO     | traces error code: 0
[2026-04-23 15:55:29] 2026-04-23 13:55:29,820 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-23 15:55:29] 2026-04-23 13:55:29,894 [wrapper] ==== pilot stdout END ====
[2026-04-23 15:55:29] 2026-04-23 13:55:29,896 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-23 15:55:29] 2026-04-23 13:55:29,897 [wrapper] pilotpid: 1018472
[2026-04-23 15:55:29] 2026-04-23 13:55:29,898 [wrapper] Pilot exit status: 0
[2026-04-23 15:55:29] 2026-04-23 13:55:29,904 [wrapper] pandaids: 7105307689
[2026-04-23 15:55:29] 2026-04-23 13:55:29,922 [wrapper] cleanup supervisor_pilot 1259003 1018473
[2026-04-23 15:55:29] 2026-04-23 13:55:29,924 [wrapper] Test setup, not cleaning
[2026-04-23 15:55:29] 2026-04-23 13:55:29,926 [wrapper] apfmon messages muted
[2026-04-23 15:55:29] 2026-04-23 13:55:29,928 [wrapper] ==== wrapper stdout END ====
[2026-04-23 15:55:29] 2026-04-23 13:55:29,929 [wrapper] ==== wrapper stderr END ====
[2026-04-23 15:55:29]  *** Error codes and diagnostics ***
[2026-04-23 15:55:29]     "exeErrorCode": 0,
[2026-04-23 15:55:29]     "pilotErrorCode": 0,
[2026-04-23 15:55:29]  *** Listing of results directory ***
[2026-04-23 15:55:29] insgesamt 457952
[2026-04-23 15:55:29] -rwx------ 1 boinc boinc     36322 21. Apr 13:20 runpilot2-wrapper.sh
[2026-04-23 15:55:29] -rw-r--r-- 1 boinc boinc    644190 21. Apr 19:04 pilot3.tar.gz
[2026-04-23 15:55:29] -rw-r--r-- 1 boinc boinc      5094 21. Apr 19:27 queuedata.json
[2026-04-23 15:55:29] -rw-r--r-- 1 boinc boinc       100 23. Apr 13:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-23 15:55:29] -rwxr-xr-x 1 boinc boinc      7986 23. Apr 13:43 run_atlas
[2026-04-23 15:55:29] -rw-r--r-- 1 boinc boinc       105 23. Apr 13:43 job.xml
[2026-04-23 15:55:29] -rw-r--r-- 2 boinc boinc 279640998 23. Apr 13:43 EVNT.49539591._000472.pool.root.1
[2026-04-23 15:55:29] drwxrwx--x 2 boinc boinc      4096 23. Apr 13:43 shared
[2026-04-23 15:55:29] -rw-r--r-- 2 boinc boinc    656947 23. Apr 13:43 input.tar.gz
[2026-04-23 15:55:29] -rw-r--r-- 2 boinc boinc     15665 23. Apr 13:43 start_atlas.sh
[2026-04-23 15:55:29] -rw-r--r-- 1 boinc boinc         0 23. Apr 13:43 boinc_setup_complete
[2026-04-23 15:55:29] -rw-r--r-- 1 boinc boinc      6698 23. Apr 13:43 init_data.xml
[2026-04-23 15:55:29] -rw-r--r-- 1 boinc boinc         0 23. Apr 13:43 boinc_lockfile
[2026-04-23 15:55:29] -rw-r--r-- 1 boinc boinc      2603 23. Apr 13:43 pandaJob.out
[2026-04-23 15:55:29] -rw------- 1 boinc boinc        52 23. Apr 13:43 setup.sh.local
[2026-04-23 15:55:29] -rw------- 1 boinc boinc    996709 23. Apr 13:44 agis_schedconf.cvmfs.json
[2026-04-23 15:55:29] -rw------- 1 boinc boinc   1509089 23. Apr 13:44 agis_ddmendpoints.agis.ALL.json
[2026-04-23 15:55:29] -rw------- 1 boinc boinc       417 23. Apr 13:44 workernode_map.json
[2026-04-23 15:55:29] drwx------ 5 boinc boinc      4096 23. Apr 13:44 pilot3
[2026-04-23 15:55:29] -rw------- 1 boinc boinc 183272528 23. Apr 15:53 HITS.49545114._033947.pool.root.1
[2026-04-23 15:55:29] -rw------- 1 boinc boinc      1009 23. Apr 15:54 memory_monitor_summary.json
[2026-04-23 15:55:29] -rw------- 1 boinc boinc    253980 23. Apr 15:54 log.49545114._033947.job.log.tgz.1
[2026-04-23 15:55:29] -rw-r--r-- 1 boinc boinc       487 23. Apr 15:54 boinc_task_state.xml
[2026-04-23 15:55:29] -rw------- 1 boinc boinc      6308 23. Apr 15:54 heartbeat_new.json
[2026-04-23 15:55:29] -rw------- 1 boinc boinc      6199 23. Apr 15:54 heartbeat.json
[2026-04-23 15:55:29] -rw------- 1 boinc boinc        95 23. Apr 15:54 pilot_heartbeat.json
[2026-04-23 15:55:29] -rw-r--r-- 1 boinc boinc      8192 23. Apr 15:55 boinc_mmap_file
[2026-04-23 15:55:29] -rw-r--r-- 1 boinc boinc        27 23. Apr 15:55 wrapper_checkpoint.txt
[2026-04-23 15:55:29] -rw------- 1 boinc boinc      5002 23. Apr 15:55 pilotlog.txt
[2026-04-23 15:55:29] -rw------- 1 boinc boinc    731970 23. Apr 15:55 log.49545114._033947.job.log.1
[2026-04-23 15:55:29] -rw------- 1 boinc boinc       357 23. Apr 15:55 output.list
[2026-04-23 15:55:29] -rw-r--r-- 1 boinc boinc       410 23. Apr 15:55 runtime_log
[2026-04-23 15:55:29] -rw------- 1 boinc boinc   1003520 23. Apr 15:55 result.tar.gz
[2026-04-23 15:55:29] -rw-r--r-- 1 boinc boinc      8924 23. Apr 15:55 runtime_log.err
[2026-04-23 15:55:29] -rw------- 1 boinc boinc       645 23. Apr 15:55 5d6de3d39b4b.diag
[2026-04-23 15:55:29] -rw-r--r-- 1 boinc boinc     20853 23. Apr 15:55 stderr.txt
[2026-04-23 15:55:29] HITS file was successfully produced:
[2026-04-23 15:55:29] -rw------- 1 boinc boinc 183272528 23. Apr 15:53 shared/HITS.pool.root.1
[2026-04-23 15:55:29]  *** Contents of shared directory: ***
[2026-04-23 15:55:29] insgesamt 453712
[2026-04-23 15:55:29] -rw-r--r-- 2 boinc boinc 279640998 23. Apr 13:43 ATLAS.root_0
[2026-04-23 15:55:29] -rw-r--r-- 2 boinc boinc    656947 23. Apr 13:43 input.tar.gz
[2026-04-23 15:55:29] -rw-r--r-- 2 boinc boinc     15665 23. Apr 13:43 start_atlas.sh
[2026-04-23 15:55:29] -rw------- 1 boinc boinc 183272528 23. Apr 15:53 HITS.pool.root.1
[2026-04-23 15:55:29] -rw------- 1 boinc boinc   1003520 23. Apr 15:55 result.tar.gz
15:55:31 (1013924): run_atlas exited; CPU time 29329.386526
15:55:31 (1013924): called boinc_finish(0)

</stderr_txt>
]]>

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