Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:16:47 (1605682): wrapper (7.7.26015): starting
17:16:47 (1605682): wrapper: running run_atlas (--nthreads 4)
[2026-04-22 17:16:47] Arguments: --nthreads 4
[2026-04-22 17:16:47] Threads: 4
[2026-04-22 17:16:47] Checking for CVMFS
[2026-04-22 17:16:47] No cvmfs_config command found, will try listing directly
[2026-04-22 17:16:47] CVMFS is ok
[2026-04-22 17:16:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-22 17:16:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-22 17:16:47] Further information can be found at the LHC@home message board.
[2026-04-22 17:16:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-22 17:16:47] Checking for apptainer binary...
[2026-04-22 17:16:47] which: no apptainer in ((null))
[2026-04-22 17:16:47] apptainer is not installed, using version from CVMFS
[2026-04-22 17:16:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-22 17:16:47] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot100/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2026-04-22 17:16:47] apptainer works
[2026-04-22 17:16:47] Set ATHENA_PROC_NUMBER=4
[2026-04-22 17:16:47] Set ATHENA_CORE_NUMBER=4
[2026-04-22 17:16:47] Starting ATLAS job with PandaID=7105299453
[2026-04-22 17:16:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot100/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-22 19:16:16]  *** The last 200 lines of the pilot log: ***
[2026-04-22 19:16:16] 2026-04-22 17:15:17,505 | INFO     | monitor loop #517: job 0:7105299453 is in state 'finished'
[2026-04-22 19:16:16] 2026-04-22 17:15:17,505 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-22 19:16:16] 2026-04-22 17:15:17,804 | INFO     | job 7105299453 has state=finished
[2026-04-22 19:16:16] 2026-04-22 17:15:17,804 | INFO     | preparing for final server update for job 7105299453 in state='finished'
[2026-04-22 19:16:16] 2026-04-22 17:15:17,805 | INFO     | reading metadata from: /var/lib/boinc/var/slot100/slots/1/PanDA_Pilot-7105299453/jobReport.json
[2026-04-22 19:16:16] 2026-04-22 17:15:17,807 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot100/slots/1/workernode_map.json
[2026-04-22 19:16:16] 2026-04-22 17:15:17,807 | INFO     | this job has now completed (state=finished)
[2026-04-22 19:16:16] 2026-04-22 17:15:17,807 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-22 19:16:16] 2026-04-22 17:15:17,807 | INFO     | log transfer has been attempted: DONE
[2026-04-22 19:16:16] 2026-04-22 17:15:17,808 | INFO     | job 7105299453 has finished - writing final server update
[2026-04-22 19:16:16] 2026-04-22 17:15:17,808 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_9276/.job.ad'
[2026-04-22 19:16:16] 2026-04-22 17:15:17,808 | INFO     | total number of processed events: 400 (read)
[2026-04-22 19:16:16] 2026-04-22 17:15:17,827 | INFO     | using path: /var/lib/boinc/var/slot100/slots/1/PanDA_Pilot-7105299453/memory_monitor_summary.json (trf name=prmon)
[2026-04-22 19:16:16] 2026-04-22 17:15:17,827 | INFO     | extracted standard info from prmon json
[2026-04-22 19:16:16] 2026-04-22 17:15:17,827 | INFO     | extracted standard memory fields from prmon json
[2026-04-22 19:16:16] 2026-04-22 17:15:17,827 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-22 19:16:16] 2026-04-22 17:15:17,827 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-22 19:16:16] 2026-04-22 17:15:17,829 | INFO     | fitting pss+swap vs Time
[2026-04-22 19:16:16] 2026-04-22 17:15:17,829 | INFO     | sum of square deviations: 483971865.0
[2026-04-22 19:16:16] 2026-04-22 17:15:17,829 | INFO     | sum of deviations: -3973424557.5000014
[2026-04-22 19:16:16] 2026-04-22 17:15:17,829 | INFO     | mean x (centered): 0.0
[2026-04-22 19:16:16] 2026-04-22 17:15:17,829 | INFO     | mean y: 2404215.5948275863
[2026-04-22 19:16:16] 2026-04-22 17:15:17,830 | INFO     | intersect: 2404215.5948275863
[2026-04-22 19:16:16] 2026-04-22 17:15:17,830 | INFO     | chi2: 1.1389021246509636
[2026-04-22 19:16:16] 2026-04-22 17:15:17,830 | INFO     | sum of square deviations: 424045160.0
[2026-04-22 19:16:16] 2026-04-22 17:15:17,830 | INFO     | sum of deviations: -3298694254.9999976
[2026-04-22 19:16:16] 2026-04-22 17:15:17,830 | INFO     | mean x (centered): 0.0
[2026-04-22 19:16:16] 2026-04-22 17:15:17,830 | INFO     | mean y: 2405934.2342342343
[2026-04-22 19:16:16] 2026-04-22 17:15:17,830 | INFO     | intersect: 2405934.2342342343
[2026-04-22 19:16:16] 2026-04-22 17:15:17,831 | INFO     | chi2: 1.1396626877384923
[2026-04-22 19:16:16] 2026-04-22 17:15:17,831 | INFO     | current chi2=1.1396626877384923 (change=-0.06678037305108955 %)
[2026-04-22 19:16:16] 2026-04-22 17:15:17,831 | INFO     | right removable region: 110
[2026-04-22 19:16:16] 2026-04-22 17:15:17,831 | INFO     | sum of square deviations: 424045160.0
[2026-04-22 19:16:16] 2026-04-22 17:15:17,831 | INFO     | sum of deviations: -14437514221.0
[2026-04-22 19:16:16] 2026-04-22 17:15:17,831 | INFO     | mean x (centered): 0.0
[2026-04-22 19:16:16] 2026-04-22 17:15:17,831 | INFO     | mean y: 2429996.6306306305
[2026-04-22 19:16:16] 2026-04-22 17:15:17,831 | INFO     | intersect: 2429996.6306306305
[2026-04-22 19:16:16] 2026-04-22 17:15:17,831 | INFO     | chi2: 0.026148917420106443
[2026-04-22 19:16:16] 2026-04-22 17:15:17,831 | INFO     | current chi2=0.026148917420106443 (change=97.70402417783528 %)
[2026-04-22 19:16:16] 2026-04-22 17:15:17,832 | INFO     | sum of square deviations: 369281342.5
[2026-04-22 19:16:16] 2026-04-22 17:15:17,832 | INFO     | sum of deviations: -12770582165.999998
[2026-04-22 19:16:16] 2026-04-22 17:15:17,832 | INFO     | mean x (centered): 0.0
[2026-04-22 19:16:16] 2026-04-22 17:15:17,832 | INFO     | mean y: 2425340.9433962265
[2026-04-22 19:16:16] 2026-04-22 17:15:17,832 | INFO     | intersect: 2425340.9433962265
[2026-04-22 19:16:16] 2026-04-22 17:15:17,832 | INFO     | chi2: 0.025938961088041734
[2026-04-22 19:16:16] 2026-04-22 17:15:17,832 | INFO     | current chi2=0.025938961088041734 (change=0.8029255234225109 %)
[2026-04-22 19:16:16] 2026-04-22 17:15:17,832 | INFO     | left removable region: 10
[2026-04-22 19:16:16] 2026-04-22 17:15:17,832 | INFO     | sum of square deviations: 310052325.0
[2026-04-22 19:16:16] 2026-04-22 17:15:17,833 | INFO     | sum of deviations: -11616697565.000002
[2026-04-22 19:16:16] 2026-04-22 17:15:17,833 | INFO     | mean x (centered): 0.0
[2026-04-22 19:16:16] 2026-04-22 17:15:17,833 | INFO     | mean y: 2428911.32
[2026-04-22 19:16:16] 2026-04-22 17:15:17,833 | INFO     | intersect: 2428911.32
[2026-04-22 19:16:16] 2026-04-22 17:15:17,833 | INFO     | chi2: 0.02317342501120536
[2026-04-22 19:16:16] 2026-04-22 17:15:17,833 | INFO     | current memory leak: -37.47 B/s (using 100 data points, chi2=0.02)
[2026-04-22 19:16:16] 2026-04-22 17:15:17,833 | INFO     | could have reported an average CPU frequency of 2823 MHz (7 samples)
[2026-04-22 19:16:16] 2026-04-22 17:15:17,833 | INFO     | ..............................
[2026-04-22 19:16:16] 2026-04-22 17:15:17,833 | INFO     | . Timing measurements:
[2026-04-22 19:16:16] 2026-04-22 17:15:17,833 | INFO     | . get job = 0 s
[2026-04-22 19:16:16] 2026-04-22 17:15:17,833 | INFO     | . initial setup = 5 s
[2026-04-22 19:16:16] 2026-04-22 17:15:17,833 | INFO     | . payload setup = 9 s
[2026-04-22 19:16:16] 2026-04-22 17:15:17,833 | INFO     | . stage-in = 0 s
[2026-04-22 19:16:16] 2026-04-22 17:15:17,833 | INFO     | . payload execution = 7069 s
[2026-04-22 19:16:16] 2026-04-22 17:15:17,833 | INFO     | . stage-out = 0 s
[2026-04-22 19:16:16] 2026-04-22 17:15:17,834 | INFO     | . log creation = 0 s
[2026-04-22 19:16:16] 2026-04-22 17:15:17,834 | INFO     | ..............................
[2026-04-22 19:16:16] 2026-04-22 17:15:17,887 | INFO     | 
[2026-04-22 19:16:16] 2026-04-22 17:15:17,888 | INFO     | job summary report
[2026-04-22 19:16:16] 2026-04-22 17:15:17,888 | INFO     | --------------------------------------------------
[2026-04-22 19:16:16] 2026-04-22 17:15:17,888 | INFO     | PanDA job id: 7105299453
[2026-04-22 19:16:16] 2026-04-22 17:15:17,888 | INFO     | task id: 49499859
[2026-04-22 19:16:16] 2026-04-22 17:15:17,888 | INFO     | errors: (none)
[2026-04-22 19:16:16] 2026-04-22 17:15:17,888 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-22 19:16:16] 2026-04-22 17:15:17,888 | INFO     | pilot state: finished 
[2026-04-22 19:16:16] 2026-04-22 17:15:17,888 | INFO     | transexitcode: 0
[2026-04-22 19:16:16] 2026-04-22 17:15:17,888 | INFO     | exeerrorcode: 0
[2026-04-22 19:16:16] 2026-04-22 17:15:17,888 | INFO     | exeerrordiag: 
[2026-04-22 19:16:16] 2026-04-22 17:15:17,888 | INFO     | exitcode: 0
[2026-04-22 19:16:16] 2026-04-22 17:15:17,888 | INFO     | exitmsg: OK
[2026-04-22 19:16:16] 2026-04-22 17:15:17,888 | INFO     | cpuconsumptiontime: 27276 s
[2026-04-22 19:16:16] 2026-04-22 17:15:17,889 | INFO     | nevents: 400
[2026-04-22 19:16:16] 2026-04-22 17:15:17,889 | INFO     | neventsw: 0
[2026-04-22 19:16:16] 2026-04-22 17:15:17,889 | INFO     | pid: 1615009
[2026-04-22 19:16:16] 2026-04-22 17:15:17,889 | INFO     | pgrp: 1615009
[2026-04-22 19:16:16] 2026-04-22 17:15:17,889 | INFO     | corecount: 4
[2026-04-22 19:16:16] 2026-04-22 17:15:17,889 | INFO     | event service: False
[2026-04-22 19:16:16] 2026-04-22 17:15:17,889 | INFO     | sizes: {0: 2276502, 11: 2276502, 7082: 2303721, 7083: 2303720, 7084: 2312854, 7085: 2312992}
[2026-04-22 19:16:16] 2026-04-22 17:15:17,889 | INFO     | --------------------------------------------------
[2026-04-22 19:16:16] 2026-04-22 17:15:17,889 | INFO     | 
[2026-04-22 19:16:16] 2026-04-22 17:15:17,889 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot100/slots/1
[2026-04-22 19:16:16] 2026-04-22 17:15:17,912 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-22 19:16:16] 2026-04-22 17:15:17,913 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-22 19:16:16] 2026-04-22 17:15:17,913 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-22 19:16:16] 2026-04-22 17:15:17,913 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-22 19:16:16] 2026-04-22 17:15:17,913 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-22 19:16:16] 2026-04-22 17:15:17,913 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-22 19:16:16] 2026-04-22 17:15:17,913 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-22 19:16:16] 2026-04-22 17:15:17,913 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-22 19:16:16] 2026-04-22 17:15:17,913 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-22 19:16:16] 2026-04-22 17:15:17,913 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-22 19:16:16] 2026-04-22 17:15:17,913 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-22 19:16:16] 2026-04-22 17:15:17,913 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-22 19:16:16] 2026-04-22 17:15:17,914 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-22 19:16:16] 2026-04-22 17:15:17,914 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-22 19:16:16] 2026-04-22 17:15:17,914 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-22 19:16:16] 2026-04-22 17:15:17,914 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-22 19:16:16] 2026-04-22 17:15:17,914 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-22 19:16:16] 2026-04-22 17:15:17,914 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-22 19:16:16] 2026-04-22 17:15:17,914 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-22 19:16:16] 2026-04-22 17:15:17,914 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-22 19:16:16] 2026-04-22 17:15:17,914 | INFO     | job 7105299453 has completed (purged errors)
[2026-04-22 19:16:16] 2026-04-22 17:15:17,914 | INFO     | overall cleanup function is called
[2026-04-22 19:16:16] 2026-04-22 17:15:18,923 | INFO     | --- collectZombieJob: --- 10, [1615009]
[2026-04-22 19:16:16] 2026-04-22 17:15:18,923 | INFO     | zombie collector waiting for pid 1615009
[2026-04-22 19:16:16] 2026-04-22 17:15:18,924 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-22 19:16:16] 2026-04-22 17:15:18,924 | INFO     | collected zombie processes
[2026-04-22 19:16:16] 2026-04-22 17:15:18,924 | INFO     | will attempt to kill all subprocesses of pid=1615009
[2026-04-22 19:16:16] 2026-04-22 17:15:19,315 | INFO     | process IDs to be killed: [1615009] (in reverse order)
[2026-04-22 19:16:16] 2026-04-22 17:15:19,467 | WARNING  | found no corresponding commands to process id(s)
[2026-04-22 19:16:16] 2026-04-22 17:15:19,467 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-22 19:16:16] 2026-04-22 17:15:19,485 | INFO     | did not find any defunct processes belonging to 1615009
[2026-04-22 19:16:16] 2026-04-22 17:15:19,497 | INFO     | did not find any defunct processes belonging to 1615009
[2026-04-22 19:16:16] 2026-04-22 17:15:19,497 | INFO     | Ready for new job
[2026-04-22 19:16:16] 2026-04-22 17:15:19,499 | INFO     | **************************************
[2026-04-22 19:16:16] 2026-04-22 17:15:19,499 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-22 19:16:16] 2026-04-22 17:15:19,499 | INFO     | **************************************
[2026-04-22 19:16:16] 2026-04-22 17:15:19,499 | INFO     | 
[2026-04-22 19:16:16] 2026-04-22 17:15:19,504 | INFO     | architecture information:
[2026-04-22 19:16:16] 2026-04-22 17:15:19,504 | INFO     | executing command: cat /etc/os-release
[2026-04-22 19:16:16] 2026-04-22 17:15:19,520 | INFO     | cat /etc/os-release:
[2026-04-22 19:16:16] NAME="CentOS Linux"
[2026-04-22 19:16:16] VERSION="7 (Core)"
[2026-04-22 19:16:16] ID="centos"
[2026-04-22 19:16:16] ID_LIKE="rhel fedora"
[2026-04-22 19:16:16] VERSION_ID="7"
[2026-04-22 19:16:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-22 19:16:16] ANSI_COLOR="0;31"
[2026-04-22 19:16:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-22 19:16:16] HOME_URL="https://www.centos.org/"
[2026-04-22 19:16:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-22 19:16:16] 
[2026-04-22 19:16:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-22 19:16:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-22 19:16:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-22 19:16:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-22 19:16:16] 
[2026-04-22 19:16:16] 2026-04-22 17:15:19,521 | INFO     | **************************************
[2026-04-22 19:16:16] 2026-04-22 17:15:20,023 | INFO     | executing command: df -mP /var/lib/boinc/var/slot100/slots/1
[2026-04-22 19:16:16] 2026-04-22 17:15:20,040 | INFO     | sufficient remaining disk space (287881297920 B)
[2026-04-22 19:16:16] 2026-04-22 17:15:20,040 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-22 19:16:16] 2026-04-22 17:15:20,041 | INFO     | current server update state: UPDATING_FINAL
[2026-04-22 19:16:16] 2026-04-22 17:15:20,041 | INFO     | update_server=False
[2026-04-22 19:16:16] 2026-04-22 17:15:20,041 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-22 19:16:16] 2026-04-22 17:15:20,041 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-22 19:16:16] 2026-04-22 17:15:20,933 | INFO     | all data control threads have been joined
[2026-04-22 19:16:16] 2026-04-22 17:15:20,942 | INFO     | job.realtimelogging is not enabled
[2026-04-22 19:16:16] 2026-04-22 17:15:20,994 | INFO     | all payload control threads have been joined
[2026-04-22 19:16:16] 2026-04-22 17:15:21,017 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-22 19:16:16] 2026-04-22 17:15:21,017 | INFO     | aborting loop
[2026-04-22 19:16:16] 2026-04-22 17:15:21,046 | INFO     | [job] retrieve thread has finished
[2026-04-22 19:16:16] 2026-04-22 17:15:21,179 | INFO     | [payload] failed_post thread has finished
[2026-04-22 19:16:16] 2026-04-22 17:15:21,457 | INFO     | [job] validate thread has finished
[2026-04-22 19:16:16] 2026-04-22 17:15:21,556 | INFO     | [job] create_data_payload thread has finished
[2026-04-22 19:16:16] 2026-04-22 17:15:21,741 | INFO     | [payload] validate_post thread has finished
[2026-04-22 19:16:16] 2026-04-22 17:15:21,748 | INFO     | all job control threads have been joined
[2026-04-22 19:16:16] 2026-04-22 17:15:21,928 | INFO     | [payload] validate_pre thread has finished
[2026-04-22 19:16:16] 2026-04-22 17:15:21,938 | INFO     | [data] control thread has finished
[2026-04-22 19:16:16] 2026-04-22 17:15:21,943 | INFO     | [data] copytool_in thread has finished
[2026-04-22 19:16:16] 2026-04-22 17:15:21,943 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-22 19:16:16] 2026-04-22 17:15:21,999 | INFO     | [payload] control thread has finished
[2026-04-22 19:16:16] 2026-04-22 17:15:22,023 | INFO     | [job] job monitor thread has finished
[2026-04-22 19:16:16] 2026-04-22 17:15:22,047 | INFO     | [data] copytool_out thread has finished
[2026-04-22 19:16:16] 2026-04-22 17:15:22,482 | INFO     | [payload] execute_payloads thread has finished
[2026-04-22 19:16:16] 2026-04-22 17:15:22,630 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-22 19:16:16] 2026-04-22 17:15:22,753 | INFO     | [job] control thread has finished
[2026-04-22 19:16:16] 2026-04-22 17:15:22,898 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-22 19:16:16] 2026-04-22 17:15:23,903 | INFO     | [job] queue monitor thread has finished
[2026-04-22 19:16:16] 2026-04-22 17:15:26,637 | INFO     | [data] queue_monitor thread has finished
[2026-04-22 19:16:16] 2026-04-22 17:15:51,046 | INFO     | PID=1609746 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-22 19:16:16] 2026-04-22 17:15:51,046 | INFO     | .. there are 6 such processes running
[2026-04-22 19:16:16] 2026-04-22 17:15:51,046 | INFO     | found 0 job(s) in 20 queues
[2026-04-22 19:16:16] 2026-04-22 17:15:51,046 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-22 19:16:16] 2026-04-22 17:15:51,046 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-22 19:16:16] 2026-04-22 17:16:10,721 | INFO     | [monitor] cgroup control has ended
[2026-04-22 19:16:16] 2026-04-22 17:16:11,467 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22926982821696)>', '<ExcThread(monitor, started 22926746470144)>']
[2026-04-22 19:16:16] 2026-04-22 17:16:12,142 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-22 19:16:16] 2026-04-22 17:16:12,142 | INFO     | [monitor] control thread has ended
[2026-04-22 19:16:16] 2026-04-22 17:16:16,493 | INFO     | all workflow threads have been joined
[2026-04-22 19:16:16] 2026-04-22 17:16:16,493 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-22 19:16:16] 2026-04-22 17:16:16,493 | INFO     | traces error code: 0
[2026-04-22 19:16:16] 2026-04-22 17:16:16,493 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-22 19:16:16] 2026-04-22 17:16:16,614 [wrapper] ==== pilot stdout END ====
[2026-04-22 19:16:16] 2026-04-22 17:16:16,618 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-22 19:16:16] 2026-04-22 17:16:16,622 [wrapper] pilotpid: 1609746
[2026-04-22 19:16:16] 2026-04-22 17:16:16,625 [wrapper] Pilot exit status: 0
[2026-04-22 19:16:16] 2026-04-22 17:16:16,637 [wrapper] pandaids: 7105299453
[2026-04-22 19:16:16] 2026-04-22 17:16:16,743 [wrapper] cleanup supervisor_pilot 1718627 1609747
[2026-04-22 19:16:16] 2026-04-22 17:16:16,746 [wrapper] Test setup, not cleaning
[2026-04-22 19:16:16] 2026-04-22 17:16:16,748 [wrapper] apfmon messages muted
[2026-04-22 19:16:16] 2026-04-22 17:16:16,751 [wrapper] ==== wrapper stdout END ====
[2026-04-22 19:16:16] 2026-04-22 17:16:16,755 [wrapper] ==== wrapper stderr END ====
[2026-04-22 19:16:16]  *** Error codes and diagnostics ***
[2026-04-22 19:16:16]     "exeErrorCode": 0,
[2026-04-22 19:16:16]     "pilotErrorCode": 0,
[2026-04-22 19:16:16]  *** Listing of results directory ***
[2026-04-22 19:16:16] total 492508
[2026-04-22 19:16:16] -rwx------. 1 boinc boinc     36322 Apr 21 13:20 runpilot2-wrapper.sh
[2026-04-22 19:16:16] -rw-r--r--. 1 boinc boinc    644190 Apr 21 19:04 pilot3.tar.gz
[2026-04-22 19:16:16] -rw-r--r--. 1 boinc boinc      5094 Apr 21 19:27 queuedata.json
[2026-04-22 19:16:16] -rw-r--r--. 1 boinc boinc       100 Apr 22 17:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-22 19:16:16] -rwxr-xr-x. 1 boinc boinc      7986 Apr 22 17:16 run_atlas
[2026-04-22 19:16:16] -rw-r--r--. 1 boinc boinc       105 Apr 22 17:16 job.xml
[2026-04-22 19:16:16] -rw-r--r--. 2 boinc boinc 301262007 Apr 22 17:16 EVNT.49475132._000007.pool.root.1
[2026-04-22 19:16:16] -rw-r--r--. 1 boinc boinc      6540 Apr 22 17:16 init_data.xml
[2026-04-22 19:16:16] -rw-r--r--. 2 boinc boinc     15665 Apr 22 17:16 start_atlas.sh
[2026-04-22 19:16:16] drwxrwx--x. 2 boinc boinc      4096 Apr 22 17:16 shared
[2026-04-22 19:16:16] -rw-r--r--. 2 boinc boinc    656949 Apr 22 17:16 input.tar.gz
[2026-04-22 19:16:16] -rw-r--r--. 1 boinc boinc         0 Apr 22 17:16 boinc_lockfile
[2026-04-22 19:16:16] -rw-r--r--. 1 boinc boinc      2637 Apr 22 17:16 pandaJob.out
[2026-04-22 19:16:16] -rw-------. 1 boinc boinc    997117 Apr 22 17:16 agis_schedconf.cvmfs.json
[2026-04-22 19:16:16] -rw-------. 1 boinc boinc   1509089 Apr 22 17:16 agis_ddmendpoints.agis.ALL.json
[2026-04-22 19:16:16] -rw-------. 1 boinc boinc       441 Apr 22 17:17 workernode_map.json
[2026-04-22 19:16:16] drwx------. 5 boinc boinc      4096 Apr 22 17:17 pilot3
[2026-04-22 19:16:16] -rw-------. 1 boinc boinc 197132469 Apr 22 19:14 HITS.49499859._000688.pool.root.1
[2026-04-22 19:16:16] -rw-------. 1 boinc boinc      1027 Apr 22 19:15 memory_monitor_summary.json
[2026-04-22 19:16:16] -rw-r--r--. 1 boinc boinc       487 Apr 22 19:15 boinc_task_state.xml
[2026-04-22 19:16:16] -rw-------. 1 boinc boinc    260101 Apr 22 19:15 log.49499859._000688.job.log.tgz.1
[2026-04-22 19:16:16] -rw-------. 1 boinc boinc      6363 Apr 22 19:15 heartbeat_new.json
[2026-04-22 19:16:16] -rw-------. 1 boinc boinc      6254 Apr 22 19:15 heartbeat.json
[2026-04-22 19:16:16] -rw-------. 1 boinc boinc        95 Apr 22 19:15 pilot_heartbeat.json
[2026-04-22 19:16:16] -rw-r--r--. 1 boinc boinc      8192 Apr 22 19:16 boinc_mmap_file
[2026-04-22 19:16:16] -rw-r--r--. 1 boinc boinc        27 Apr 22 19:16 wrapper_checkpoint.txt
[2026-04-22 19:16:16] -rw-------. 1 boinc boinc      4901 Apr 22 19:16 pilotlog.txt
[2026-04-22 19:16:16] -rw-------. 1 boinc boinc    679167 Apr 22 19:16 log.49499859._000688.job.log.1
[2026-04-22 19:16:16] -rw-------. 1 boinc boinc       357 Apr 22 19:16 output.list
[2026-04-22 19:16:16] -rw-r--r--. 1 boinc boinc       410 Apr 22 19:16 runtime_log
[2026-04-22 19:16:16] -rw-------. 1 boinc boinc    952320 Apr 22 19:16 result.tar.gz
[2026-04-22 19:16:16] -rw-r--r--. 1 boinc boinc      8843 Apr 22 19:16 runtime_log.err
[2026-04-22 19:16:16] -rw-------. 1 boinc boinc       661 Apr 22 19:16 5d3976b42e32.diag
[2026-04-22 19:16:16] -rw-r--r--. 1 boinc boinc     21045 Apr 22 19:16 stderr.txt
[2026-04-22 19:16:16] HITS file was successfully produced:
[2026-04-22 19:16:16] -rw-------. 1 boinc boinc 197132469 Apr 22 19:14 shared/HITS.pool.root.1
[2026-04-22 19:16:16]  *** Contents of shared directory: ***
[2026-04-22 19:16:16] total 488320
[2026-04-22 19:16:16] -rw-r--r--. 2 boinc boinc 301262007 Apr 22 17:16 ATLAS.root_0
[2026-04-22 19:16:16] -rw-r--r--. 2 boinc boinc     15665 Apr 22 17:16 start_atlas.sh
[2026-04-22 19:16:16] -rw-r--r--. 2 boinc boinc    656949 Apr 22 17:16 input.tar.gz
[2026-04-22 19:16:16] -rw-------. 1 boinc boinc 197132469 Apr 22 19:14 HITS.pool.root.1
[2026-04-22 19:16:16] -rw-------. 1 boinc boinc    952320 Apr 22 19:16 result.tar.gz
19:16:18 (1605682): run_atlas exited; CPU time 27534.866964
19:16:18 (1605682): called boinc_finish(0)

</stderr_txt>
]]>

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