Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:58:51 (26429): wrapper (7.7.26015): starting
00:58:51 (26429): wrapper: running run_atlas (--nthreads 4)
[2026-04-22 00:58:51] Arguments: --nthreads 4
[2026-04-22 00:58:51] Threads: 4
[2026-04-22 00:58:51] Checking for CVMFS
[2026-04-22 00:58:51] No cvmfs_config command found, will try listing directly
[2026-04-22 00:58:51] CVMFS is ok
[2026-04-22 00:58:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-22 00:58:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-22 00:58:51] Further information can be found at the LHC@home message board.
[2026-04-22 00:58:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-22 00:58:51] Checking for apptainer binary...
[2026-04-22 00:58:51] which: no apptainer in ((null))
[2026-04-22 00:58:51] apptainer is not installed, using version from CVMFS
[2026-04-22 00:58:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-22 00:58:51] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot100/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2026-04-22 00:58:51] apptainer works
[2026-04-22 00:58:51] Set ATHENA_PROC_NUMBER=4
[2026-04-22 00:58:51] Set ATHENA_CORE_NUMBER=4
[2026-04-22 00:58:51] Starting ATLAS job with PandaID=7105445861
[2026-04-22 00:58:51] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot100/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-22 04:38:39]  *** The last 200 lines of the pilot log: ***
[2026-04-22 04:38:39] 2026-04-22 02:37:44,123 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-22 04:38:39] 2026-04-22 02:37:44,123 | INFO     | log transfer has been attempted: DONE
[2026-04-22 04:38:39] 2026-04-22 02:37:44,123 | INFO     | job 7105445861 has finished - writing final server update
[2026-04-22 04:38:39] 2026-04-22 02:37:44,124 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_9276/.job.ad'
[2026-04-22 04:38:39] 2026-04-22 02:37:44,124 | INFO     | total number of processed events: 400 (read)
[2026-04-22 04:38:39] 2026-04-22 02:37:44,145 | INFO     | using path: /var/lib/boinc/var/slot100/slots/1/PanDA_Pilot-7105445861/memory_monitor_summary.json (trf name=prmon)
[2026-04-22 04:38:39] 2026-04-22 02:37:44,146 | INFO     | extracted standard info from prmon json
[2026-04-22 04:38:39] 2026-04-22 02:37:44,146 | INFO     | extracted standard memory fields from prmon json
[2026-04-22 04:38:39] 2026-04-22 02:37:44,146 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-22 04:38:39] 2026-04-22 02:37:44,146 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-22 04:38:39] 2026-04-22 02:37:44,149 | INFO     | fitting pss+swap vs Time
[2026-04-22 04:38:39] 2026-04-22 02:37:44,150 | INFO     | sum of square deviations: 3081657780.0
[2026-04-22 04:38:39] 2026-04-22 02:37:44,151 | INFO     | sum of deviations: 11253233334.999996
[2026-04-22 04:38:39] 2026-04-22 02:37:44,151 | INFO     | mean x (centered): 0.0
[2026-04-22 04:38:39] 2026-04-22 02:37:44,151 | INFO     | mean y: 2346621.68372093
[2026-04-22 04:38:39] 2026-04-22 02:37:44,151 | INFO     | intersect: 2346621.68372093
[2026-04-22 04:38:39] 2026-04-22 02:37:44,151 | INFO     | chi2: 2.0973255951707226
[2026-04-22 04:38:39] 2026-04-22 02:37:44,152 | INFO     | sum of square deviations: 2871616632.5
[2026-04-22 04:38:39] 2026-04-22 02:37:44,153 | INFO     | sum of deviations: 24456803383.0
[2026-04-22 04:38:39] 2026-04-22 02:37:44,153 | INFO     | mean x (centered): 0.0
[2026-04-22 04:38:39] 2026-04-22 02:37:44,153 | INFO     | mean y: 2356022.019047619
[2026-04-22 04:38:39] 2026-04-22 02:37:44,153 | INFO     | intersect: 2356022.019047619
[2026-04-22 04:38:39] 2026-04-22 02:37:44,154 | INFO     | chi2: 1.3081237359347648
[2026-04-22 04:38:39] 2026-04-22 02:37:44,154 | INFO     | current chi2=1.3081237359347648 (change=37.62896238205287 %)
[2026-04-22 04:38:39] 2026-04-22 02:37:44,154 | INFO     | sum of square deviations: 2671343110.0
[2026-04-22 04:38:39] 2026-04-22 02:37:44,155 | INFO     | sum of deviations: 23833315795.000004
[2026-04-22 04:38:39] 2026-04-22 02:37:44,155 | INFO     | mean x (centered): 0.0
[2026-04-22 04:38:39] 2026-04-22 02:37:44,156 | INFO     | mean y: 2355547.1707317075
[2026-04-22 04:38:39] 2026-04-22 02:37:44,156 | INFO     | intersect: 2355547.1707317075
[2026-04-22 04:38:39] 2026-04-22 02:37:44,156 | INFO     | chi2: 1.3088119053722747
[2026-04-22 04:38:39] 2026-04-22 02:37:44,156 | INFO     | current chi2=1.3088119053722747 (change=-0.052607365695269435 %)
[2026-04-22 04:38:39] 2026-04-22 02:37:44,156 | INFO     | right removable region: 204
[2026-04-22 04:38:39] 2026-04-22 02:37:44,156 | INFO     | sum of square deviations: 2871616632.5
[2026-04-22 04:38:39] 2026-04-22 02:37:44,158 | INFO     | sum of deviations: -15478106785.500002
[2026-04-22 04:38:39] 2026-04-22 02:37:44,158 | INFO     | mean x (centered): 0.0
[2026-04-22 04:38:39] 2026-04-22 02:37:44,158 | INFO     | mean y: 2365787.7476190478
[2026-04-22 04:38:39] 2026-04-22 02:37:44,158 | INFO     | intersect: 2365787.7476190478
[2026-04-22 04:38:39] 2026-04-22 02:37:44,158 | INFO     | chi2: 0.8167326625266594
[2026-04-22 04:38:39] 2026-04-22 02:37:44,158 | INFO     | current chi2=0.8167326625266594 (change=61.058375275290665 %)
[2026-04-22 04:38:39] 2026-04-22 02:37:44,158 | INFO     | sum of square deviations: 2671343110.0
[2026-04-22 04:38:39] 2026-04-22 02:37:44,160 | INFO     | sum of deviations: -13893959630.0
[2026-04-22 04:38:39] 2026-04-22 02:37:44,160 | INFO     | mean x (centered): 0.0
[2026-04-22 04:38:39] 2026-04-22 02:37:44,160 | INFO     | mean y: 2364576.9853658536
[2026-04-22 04:38:39] 2026-04-22 02:37:44,160 | INFO     | intersect: 2364576.9853658536
[2026-04-22 04:38:39] 2026-04-22 02:37:44,160 | INFO     | chi2: 0.8158032196710261
[2026-04-22 04:38:39] 2026-04-22 02:37:44,160 | INFO     | current chi2=0.8158032196710261 (change=0.11380013292942182 %)
[2026-04-22 04:38:39] 2026-04-22 02:37:44,160 | INFO     | left removable region: 10
[2026-04-22 04:38:39] 2026-04-22 02:37:44,161 | INFO     | sum of square deviations: 2263977332.5
[2026-04-22 04:38:39] 2026-04-22 02:37:44,162 | INFO     | sum of deviations: -754349484.9999996
[2026-04-22 04:38:39] 2026-04-22 02:37:44,162 | INFO     | mean x (centered): 0.0
[2026-04-22 04:38:39] 2026-04-22 02:37:44,162 | INFO     | mean y: 2374876.587628866
[2026-04-22 04:38:39] 2026-04-22 02:37:44,162 | INFO     | intersect: 2374876.587628866
[2026-04-22 04:38:39] 2026-04-22 02:37:44,162 | INFO     | chi2: 0.00795490375192855
[2026-04-22 04:38:39] 2026-04-22 02:37:44,162 | INFO     | current memory leak: -0.33 B/s (using 194 data points, chi2=0.01)
[2026-04-22 04:38:39] 2026-04-22 02:37:44,163 | INFO     | could have reported an average CPU frequency of 2762 MHz (11 samples)
[2026-04-22 04:38:39] 2026-04-22 02:37:44,163 | INFO     | ..............................
[2026-04-22 04:38:39] 2026-04-22 02:37:44,163 | INFO     | . Timing measurements:
[2026-04-22 04:38:39] 2026-04-22 02:37:44,163 | INFO     | . get job = 0 s
[2026-04-22 04:38:39] 2026-04-22 02:37:44,163 | INFO     | . initial setup = 7 s
[2026-04-22 04:38:39] 2026-04-22 02:37:44,163 | INFO     | . payload setup = 13 s
[2026-04-22 04:38:39] 2026-04-22 02:37:44,163 | INFO     | . stage-in = 0 s
[2026-04-22 04:38:39] 2026-04-22 02:37:44,163 | INFO     | . payload execution = 13081 s
[2026-04-22 04:38:39] 2026-04-22 02:37:44,163 | INFO     | . stage-out = 0 s
[2026-04-22 04:38:39] 2026-04-22 02:37:44,163 | INFO     | . log creation = 0 s
[2026-04-22 04:38:39] 2026-04-22 02:37:44,163 | INFO     | ..............................
[2026-04-22 04:38:39] 2026-04-22 02:37:44,248 | INFO     | 
[2026-04-22 04:38:39] 2026-04-22 02:37:44,249 | INFO     | job summary report
[2026-04-22 04:38:39] 2026-04-22 02:37:44,249 | INFO     | --------------------------------------------------
[2026-04-22 04:38:39] 2026-04-22 02:37:44,249 | INFO     | PanDA job id: 7105445861
[2026-04-22 04:38:39] 2026-04-22 02:37:44,249 | INFO     | task id: 49820375
[2026-04-22 04:38:39] 2026-04-22 02:37:44,249 | INFO     | errors: (none)
[2026-04-22 04:38:39] 2026-04-22 02:37:44,249 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-22 04:38:39] 2026-04-22 02:37:44,249 | INFO     | pilot state: finished 
[2026-04-22 04:38:39] 2026-04-22 02:37:44,249 | INFO     | transexitcode: 0
[2026-04-22 04:38:39] 2026-04-22 02:37:44,249 | INFO     | exeerrorcode: 0
[2026-04-22 04:38:39] 2026-04-22 02:37:44,249 | INFO     | exeerrordiag: 
[2026-04-22 04:38:39] 2026-04-22 02:37:44,249 | INFO     | exitcode: 0
[2026-04-22 04:38:39] 2026-04-22 02:37:44,250 | INFO     | exitmsg: OK
[2026-04-22 04:38:39] 2026-04-22 02:37:44,250 | INFO     | cpuconsumptiontime: 50620 s
[2026-04-22 04:38:39] 2026-04-22 02:37:44,250 | INFO     | nevents: 400
[2026-04-22 04:38:39] 2026-04-22 02:37:44,250 | INFO     | neventsw: 0
[2026-04-22 04:38:39] 2026-04-22 02:37:44,250 | INFO     | pid: 36096
[2026-04-22 04:38:39] 2026-04-22 02:37:44,250 | INFO     | pgrp: 36096
[2026-04-22 04:38:39] 2026-04-22 02:37:44,250 | INFO     | corecount: 4
[2026-04-22 04:38:39] 2026-04-22 02:37:44,250 | INFO     | event service: False
[2026-04-22 04:38:39] 2026-04-22 02:37:44,250 | INFO     | sizes: {0: 2276424, 11: 2276424, 13098: 2307331, 13099: 2316353, 13100: 2316409, 13101: 2316603}
[2026-04-22 04:38:39] 2026-04-22 02:37:44,250 | INFO     | --------------------------------------------------
[2026-04-22 04:38:39] 2026-04-22 02:37:44,250 | INFO     | 
[2026-04-22 04:38:39] 2026-04-22 02:37:44,251 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot100/slots/1
[2026-04-22 04:38:39] 2026-04-22 02:37:44,285 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-22 04:38:39] 2026-04-22 02:37:44,285 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-22 04:38:39] 2026-04-22 02:37:44,285 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-22 04:38:39] 2026-04-22 02:37:44,285 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-22 04:38:39] 2026-04-22 02:37:44,285 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-22 04:38:39] 2026-04-22 02:37:44,286 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-22 04:38:39] 2026-04-22 02:37:44,286 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-22 04:38:39] 2026-04-22 02:37:44,286 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-22 04:38:39] 2026-04-22 02:37:44,286 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-22 04:38:39] 2026-04-22 02:37:44,286 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-22 04:38:39] 2026-04-22 02:37:44,286 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-22 04:38:39] 2026-04-22 02:37:44,286 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-22 04:38:39] 2026-04-22 02:37:44,286 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-22 04:38:39] 2026-04-22 02:37:44,286 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-22 04:38:39] 2026-04-22 02:37:44,286 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-22 04:38:39] 2026-04-22 02:37:44,288 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-22 04:38:39] 2026-04-22 02:37:44,288 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-22 04:38:39] 2026-04-22 02:37:44,288 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-22 04:38:39] 2026-04-22 02:37:44,288 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-22 04:38:39] 2026-04-22 02:37:44,288 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-22 04:38:39] 2026-04-22 02:37:44,288 | INFO     | job 7105445861 has completed (purged errors)
[2026-04-22 04:38:39] 2026-04-22 02:37:44,289 | INFO     | overall cleanup function is called
[2026-04-22 04:38:39] 2026-04-22 02:37:45,298 | INFO     | --- collectZombieJob: --- 10, [36096]
[2026-04-22 04:38:39] 2026-04-22 02:37:45,298 | INFO     | zombie collector waiting for pid 36096
[2026-04-22 04:38:39] 2026-04-22 02:37:45,298 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-22 04:38:39] 2026-04-22 02:37:45,299 | INFO     | collected zombie processes
[2026-04-22 04:38:39] 2026-04-22 02:37:45,299 | INFO     | will attempt to kill all subprocesses of pid=36096
[2026-04-22 04:38:39] 2026-04-22 02:37:46,040 | INFO     | process IDs to be killed: [36096] (in reverse order)
[2026-04-22 04:38:39] 2026-04-22 02:37:46,308 | WARNING  | found no corresponding commands to process id(s)
[2026-04-22 04:38:39] 2026-04-22 02:37:46,309 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-22 04:38:39] 2026-04-22 02:37:46,337 | INFO     | did not find any defunct processes belonging to 36096
[2026-04-22 04:38:39] 2026-04-22 02:37:46,361 | INFO     | did not find any defunct processes belonging to 36096
[2026-04-22 04:38:39] 2026-04-22 02:37:46,361 | INFO     | Ready for new job
[2026-04-22 04:38:39] 2026-04-22 02:37:46,364 | INFO     | **************************************
[2026-04-22 04:38:39] 2026-04-22 02:37:46,364 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-22 04:38:39] 2026-04-22 02:37:46,364 | INFO     | **************************************
[2026-04-22 04:38:39] 2026-04-22 02:37:46,364 | INFO     | 
[2026-04-22 04:38:39] 2026-04-22 02:37:46,372 | INFO     | architecture information:
[2026-04-22 04:38:39] 2026-04-22 02:37:46,373 | INFO     | executing command: cat /etc/os-release
[2026-04-22 04:38:39] 2026-04-22 02:37:46,395 | INFO     | cat /etc/os-release:
[2026-04-22 04:38:39] NAME="CentOS Linux"
[2026-04-22 04:38:39] VERSION="7 (Core)"
[2026-04-22 04:38:39] ID="centos"
[2026-04-22 04:38:39] ID_LIKE="rhel fedora"
[2026-04-22 04:38:39] VERSION_ID="7"
[2026-04-22 04:38:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-22 04:38:39] ANSI_COLOR="0;31"
[2026-04-22 04:38:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-22 04:38:39] HOME_URL="https://www.centos.org/"
[2026-04-22 04:38:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-22 04:38:39] 
[2026-04-22 04:38:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-22 04:38:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-22 04:38:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-22 04:38:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-22 04:38:39] 
[2026-04-22 04:38:39] 2026-04-22 02:37:46,396 | INFO     | **************************************
[2026-04-22 04:38:39] 2026-04-22 02:37:46,899 | INFO     | executing command: df -mP /var/lib/boinc/var/slot100/slots/1
[2026-04-22 04:38:39] 2026-04-22 02:37:46,926 | INFO     | sufficient remaining disk space (182794059776 B)
[2026-04-22 04:38:39] 2026-04-22 02:37:46,926 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-22 04:38:39] 2026-04-22 02:37:46,926 | INFO     | current server update state: UPDATING_FINAL
[2026-04-22 04:38:39] 2026-04-22 02:37:46,927 | INFO     | update_server=False
[2026-04-22 04:38:39] 2026-04-22 02:37:46,927 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-22 04:38:39] 2026-04-22 02:37:46,927 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-22 04:38:39] 2026-04-22 02:37:46,927 | INFO     | aborting loop
[2026-04-22 04:38:39] 2026-04-22 02:37:47,511 | INFO     | all data control threads have been joined
[2026-04-22 04:38:39] 2026-04-22 02:37:47,623 | INFO     | all payload control threads have been joined
[2026-04-22 04:38:39] 2026-04-22 02:37:47,819 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-22 04:38:39] 2026-04-22 02:37:47,932 | INFO     | [job] retrieve thread has finished
[2026-04-22 04:38:39] 2026-04-22 02:37:47,933 | INFO     | [job] job monitor thread has finished
[2026-04-22 04:38:39] 2026-04-22 02:37:47,948 | INFO     | [payload] execute_payloads thread has finished
[2026-04-22 04:38:39] 2026-04-22 02:37:48,014 | INFO     | all job control threads have been joined
[2026-04-22 04:38:39] 2026-04-22 02:37:48,126 | INFO     | [payload] failed_post thread has finished
[2026-04-22 04:38:39] 2026-04-22 02:37:48,134 | INFO     | [payload] validate_pre thread has finished
[2026-04-22 04:38:39] 2026-04-22 02:37:48,517 | INFO     | [data] control thread has finished
[2026-04-22 04:38:39] 2026-04-22 02:37:48,629 | INFO     | [payload] control thread has finished
[2026-04-22 04:38:39] 2026-04-22 02:37:48,677 | INFO     | [payload] validate_post thread has finished
[2026-04-22 04:38:39] 2026-04-22 02:37:48,684 | INFO     | [data] copytool_in thread has finished
[2026-04-22 04:38:39] 2026-04-22 02:37:49,019 | INFO     | [job] control thread has finished
[2026-04-22 04:38:39] 2026-04-22 02:37:49,069 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-22 04:38:39] 2026-04-22 02:37:49,259 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-22 04:38:39] 2026-04-22 02:37:49,324 | INFO     | [job] validate thread has finished
[2026-04-22 04:38:39] 2026-04-22 02:37:49,357 | INFO     | [job] create_data_payload thread has finished
[2026-04-22 04:38:39] 2026-04-22 02:37:49,823 | INFO     | [data] copytool_out thread has finished
[2026-04-22 04:38:39] 2026-04-22 02:37:50,264 | INFO     | [job] queue monitor thread has finished
[2026-04-22 04:38:39] 2026-04-22 02:37:53,075 | INFO     | [data] queue_monitor thread has finished
[2026-04-22 04:38:39] 2026-04-22 02:37:57,164 | INFO     | job.realtimelogging is not enabled
[2026-04-22 04:38:39] 2026-04-22 02:37:58,169 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-22 04:38:39] 2026-04-22 02:38:17,677 | INFO     | PID=30579 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-22 04:38:39] 2026-04-22 02:38:17,677 | INFO     | .. there are 13 such processes running
[2026-04-22 04:38:39] 2026-04-22 02:38:17,678 | INFO     | found 0 job(s) in 20 queues
[2026-04-22 04:38:39] 2026-04-22 02:38:17,678 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-22 04:38:39] 2026-04-22 02:38:17,678 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-22 04:38:39] 2026-04-22 02:38:30,579 | INFO     | [monitor] cgroup control has ended
[2026-04-22 04:38:39] 2026-04-22 02:38:32,190 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22996365903680)>', '<ExcThread(monitor, started 22996045498112)>']
[2026-04-22 04:38:39] 2026-04-22 02:38:32,753 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-22 04:38:39] 2026-04-22 02:38:32,753 | INFO     | [monitor] control thread has ended
[2026-04-22 04:38:39] 2026-04-22 02:38:37,214 | INFO     | all workflow threads have been joined
[2026-04-22 04:38:39] 2026-04-22 02:38:37,214 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-22 04:38:39] 2026-04-22 02:38:37,215 | INFO     | traces error code: 0
[2026-04-22 04:38:39] 2026-04-22 02:38:37,215 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-22 04:38:39] 2026-04-22 02:38:37,342 [wrapper] ==== pilot stdout END ====
[2026-04-22 04:38:39] 2026-04-22 02:38:37,346 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-22 04:38:39] 2026-04-22 02:38:37,349 [wrapper] pilotpid: 30579
[2026-04-22 04:38:39] 2026-04-22 02:38:37,353 [wrapper] Pilot exit status: 0
[2026-04-22 04:38:39] 2026-04-22 02:38:37,368 [wrapper] pandaids: 7105445861
[2026-04-22 04:38:39] 2026-04-22 02:38:37,560 [wrapper] cleanup supervisor_pilot  399191 30580
[2026-04-22 04:38:39] 2026-04-22 02:38:37,565 [wrapper] Test setup, not cleaning
[2026-04-22 04:38:39] 2026-04-22 02:38:37,569 [wrapper] apfmon messages muted
[2026-04-22 04:38:39] 2026-04-22 02:38:37,573 [wrapper] ==== wrapper stdout END ====
[2026-04-22 04:38:39] 2026-04-22 02:38:37,576 [wrapper] ==== wrapper stderr END ====
[2026-04-22 04:38:39]  *** Error codes and diagnostics ***
[2026-04-22 04:38:39]     "exeErrorCode": 0,
[2026-04-22 04:38:39]     "pilotErrorCode": 0,
[2026-04-22 04:38:39]  *** Listing of results directory ***
[2026-04-22 04:38:39] total 2475712
[2026-04-22 04:38:39] -rwx------. 1 boinc boinc      36322 Apr 21 13:20 runpilot2-wrapper.sh
[2026-04-22 04:38:39] -rw-r--r--. 1 boinc boinc     644190 Apr 21 19:04 pilot3.tar.gz
[2026-04-22 04:38:39] -rw-r--r--. 1 boinc boinc       5094 Apr 21 19:27 queuedata.json
[2026-04-22 04:38:39] -rw-r--r--. 1 boinc boinc        100 Apr 22 00:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-22 04:38:39] -rwxr-xr-x. 1 boinc boinc       7986 Apr 22 00:58 run_atlas
[2026-04-22 04:38:39] -rw-r--r--. 1 boinc boinc        105 Apr 22 00:58 job.xml
[2026-04-22 04:38:39] -rw-r--r--. 1 boinc boinc       6540 Apr 22 00:58 init_data.xml
[2026-04-22 04:38:39] -rw-r--r--. 2 boinc boinc 2254743933 Apr 22 00:58 EVNT.49820373._000043.pool.root.1
[2026-04-22 04:38:39] -rw-r--r--. 2 boinc boinc      15665 Apr 22 00:58 start_atlas.sh
[2026-04-22 04:38:39] drwxrwx--x. 2 boinc boinc       4096 Apr 22 00:58 shared
[2026-04-22 04:38:39] -rw-r--r--. 2 boinc boinc     656933 Apr 22 00:58 input.tar.gz
[2026-04-22 04:38:39] -rw-r--r--. 1 boinc boinc          0 Apr 22 00:58 boinc_lockfile
[2026-04-22 04:38:39] -rw-r--r--. 1 boinc boinc       2585 Apr 22 00:58 pandaJob.out
[2026-04-22 04:38:39] -rw-------. 1 boinc boinc     997058 Apr 22 00:59 agis_schedconf.cvmfs.json
[2026-04-22 04:38:39] -rw-------. 1 boinc boinc        444 Apr 22 00:59 workernode_map.json
[2026-04-22 04:38:39] drwx------. 5 boinc boinc       4096 Apr 22 00:59 pilot3
[2026-04-22 04:38:39] -rw-------. 1 boinc boinc  273250797 Apr 22 04:37 HITS.49820375._011485.pool.root.1
[2026-04-22 04:38:39] -rw-r--r--. 1 boinc boinc        488 Apr 22 04:37 boinc_task_state.xml
[2026-04-22 04:38:39] -rw-------. 1 boinc boinc       1026 Apr 22 04:37 memory_monitor_summary.json
[2026-04-22 04:38:39] -rw-------. 1 boinc boinc    1509089 Apr 22 04:37 agis_ddmendpoints.agis.ALL.json
[2026-04-22 04:38:39] -rw-------. 1 boinc boinc     324170 Apr 22 04:37 log.49820375._011485.job.log.tgz.1
[2026-04-22 04:38:39] -rw-------. 1 boinc boinc       6369 Apr 22 04:37 heartbeat_new.json
[2026-04-22 04:38:39] -rw-------. 1 boinc boinc       6260 Apr 22 04:37 heartbeat.json
[2026-04-22 04:38:39] -rw-------. 1 boinc boinc         95 Apr 22 04:38 pilot_heartbeat.json
[2026-04-22 04:38:39] -rw-r--r--. 1 boinc boinc       8192 Apr 22 04:38 boinc_mmap_file
[2026-04-22 04:38:39] -rw-r--r--. 1 boinc boinc         27 Apr 22 04:38 wrapper_checkpoint.txt
[2026-04-22 04:38:39] -rw-------. 1 boinc boinc       4900 Apr 22 04:38 pilotlog.txt
[2026-04-22 04:38:39] -rw-------. 1 boinc boinc    1212525 Apr 22 04:38 log.49820375._011485.job.log.1
[2026-04-22 04:38:39] -rw-------. 1 boinc boinc        357 Apr 22 04:38 output.list
[2026-04-22 04:38:39] -rw-r--r--. 1 boinc boinc        410 Apr 22 04:38 runtime_log
[2026-04-22 04:38:39] -rw-------. 1 boinc boinc    1556480 Apr 22 04:38 result.tar.gz
[2026-04-22 04:38:39] -rw-r--r--. 1 boinc boinc       8844 Apr 22 04:38 runtime_log.err
[2026-04-22 04:38:39] -rw-------. 1 boinc boinc        665 Apr 22 04:38 5d23e7c35a5c.diag
[2026-04-22 04:38:39] -rw-r--r--. 1 boinc boinc      20795 Apr 22 04:38 stderr.txt
[2026-04-22 04:38:39] HITS file was successfully produced:
[2026-04-22 04:38:39] -rw-------. 1 boinc boinc 273250797 Apr 22 04:37 shared/HITS.pool.root.1
[2026-04-22 04:38:39]  *** Contents of shared directory: ***
[2026-04-22 04:38:39] total 2470936
[2026-04-22 04:38:39] -rw-r--r--. 2 boinc boinc 2254743933 Apr 22 00:58 ATLAS.root_0
[2026-04-22 04:38:39] -rw-r--r--. 2 boinc boinc      15665 Apr 22 00:58 start_atlas.sh
[2026-04-22 04:38:39] -rw-r--r--. 2 boinc boinc     656933 Apr 22 00:58 input.tar.gz
[2026-04-22 04:38:39] -rw-------. 1 boinc boinc  273250797 Apr 22 04:37 HITS.pool.root.1
[2026-04-22 04:38:39] -rw-------. 1 boinc boinc    1556480 Apr 22 04:38 result.tar.gz
04:38:41 (26429): run_atlas exited; CPU time 51375.531217
04:38:41 (26429): called boinc_finish(0)

</stderr_txt>
]]>

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