Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:19:17 (1605770): wrapper (7.7.26015): starting
15:19:17 (1605770): wrapper: running run_atlas (--nthreads 9)
[2026-04-21 15:19:17] Arguments: --nthreads 9
[2026-04-21 15:19:17] Threads: 9
[2026-04-21 15:19:17] Checking for CVMFS
[2026-04-21 15:19:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-21 15:19:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-21 15:19:19] Running cvmfs_config stat atlas.cern.ch
[2026-04-21 15:19:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-21 15:19:20] 2.13.3.0 14106 240652 323492 158701 3 70 40771934 40960000 36983 16776704 0 3168493946 99.788 1892369242 43385 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-21 15:19:20] CVMFS is ok
[2026-04-21 15:19:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 15:19:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 15:19:20] Further information can be found at the LHC@home message board.
[2026-04-21 15:19:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 15:19:20] Checking for apptainer binary...
[2026-04-21 15:19:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-21 15:19:20] Running /usr/bin/apptainer --version
[2026-04-21 15:19:21] apptainer version 1.4.5-2.el9
[2026-04-21 15:19:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 15:19:23] c8-7-5.aglt2.org
[2026-04-21 15:19:23] apptainer works
[2026-04-21 15:19:23] Set ATHENA_PROC_NUMBER=9
[2026-04-21 15:19:23] Set ATHENA_CORE_NUMBER=9
[2026-04-21 15:19:23] Starting ATLAS job with PandaID=7105647331
[2026-04-21 15:19:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-21 16:58:42]  *** The last 200 lines of the pilot log: ***
[2026-04-21 16:58:42]  filesize=511851
[2026-04-21 16:58:42]  filetype=log
[2026-04-21 16:58:42]  guid=209cb015-4524-44db-9e24-beb2604e3f4c
[2026-04-21 16:58:42]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-21 16:58:42]  is_altstaged=None
[2026-04-21 16:58:42]  is_tar=False
[2026-04-21 16:58:42]  lfn=log.49820244._015410.job.log.tgz.1
[2026-04-21 16:58:42]  mtime=0
[2026-04-21 16:58:42]  protocol_id=None
[2026-04-21 16:58:42]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-21 16:58:42]  replicas=None
[2026-04-21 16:58:42]  scope=mc23_13p6TeV
[2026-04-21 16:58:42]  status=None
[2026-04-21 16:58:42]  status_code=0
[2026-04-21 16:58:42]  storage_token=
[2026-04-21 16:58:42]  surl=/tmp/boinchome/slots/10/PanDA_Pilot-7105647331/log.49820244._015410.job.log.tgz.1
[2026-04-21 16:58:42]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a6/26/log.49820244._015410.job.log.tgz.1
[2026-04-21 16:58:42]  workdir=None
[2026-04-21 16:58:42] ]
[2026-04-21 16:58:42] 2026-04-21 20:57:31,949 | INFO     | transferring file log.49820244._015410.job.log.tgz.1 from /tmp/boinchome/slots/10/PanDA_Pilot-7105647331/log.49820244._015410.job.log.tgz.1 to /tmp/boinchome/slots
[2026-04-21 16:58:42] 2026-04-21 20:57:31,950 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/10/PanDA_Pilot-7105647331/log.49820244._015410.job.log.tgz.1 /tmp/boinchome/slots/10/log.49820244._015410.j
[2026-04-21 16:58:42] 2026-04-21 20:57:31,969 | INFO     | adding to output.list: log.49820244._015410.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a6/26/log.49820244._015410.job.log.tg
[2026-04-21 16:58:42] 2026-04-21 20:57:31,970 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-21 16:58:42] 2026-04-21 20:57:31,970 | INFO     | summary of transferred files:
[2026-04-21 16:58:42] 2026-04-21 20:57:31,970 | INFO     |  -- lfn=log.49820244._015410.job.log.tgz.1, status_code=0, status=transferred
[2026-04-21 16:58:42] 2026-04-21 20:57:31,970 | INFO     | stage-out finished correctly
[2026-04-21 16:58:42] 2026-04-21 20:57:33,452 | WARNING  | process 1642166 can no longer be monitored (due to stat problems) - aborting
[2026-04-21 16:58:42] 2026-04-21 20:57:33,452 | INFO     | using path: /tmp/boinchome/slots/10/PanDA_Pilot-7105647331/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 16:58:42] 2026-04-21 20:57:33,822 | INFO     | number of running child processes to parent process 1642166: 1
[2026-04-21 16:58:42] 2026-04-21 20:57:33,822 | INFO     | maximum number of monitored processes: 6
[2026-04-21 16:58:42] 2026-04-21 20:57:34,292 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-21 16:58:42] 2026-04-21 20:57:34,343 | INFO     | job 7105647331 has state=finished
[2026-04-21 16:58:42] 2026-04-21 20:57:34,343 | INFO     | preparing for final server update for job 7105647331 in state='finished'
[2026-04-21 16:58:42] 2026-04-21 20:57:34,343 | INFO     | reading metadata from: /tmp/boinchome/slots/10/PanDA_Pilot-7105647331/jobReport.json
[2026-04-21 16:58:42] 2026-04-21 20:57:34,344 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/10/workernode_map.json
[2026-04-21 16:58:42] 2026-04-21 20:57:34,345 | INFO     | this job has now completed (state=finished)
[2026-04-21 16:58:42] 2026-04-21 20:57:34,345 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-21 16:58:42] 2026-04-21 20:57:34,345 | INFO     | log transfer has been attempted: DONE
[2026-04-21 16:58:42] 2026-04-21 20:57:34,345 | INFO     | job 7105647331 has finished - writing final server update
[2026-04-21 16:58:42] 2026-04-21 20:57:34,345 | INFO     | total number of processed events: 400 (read)
[2026-04-21 16:58:42] 2026-04-21 20:57:34,356 | INFO     | using path: /tmp/boinchome/slots/10/PanDA_Pilot-7105647331/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 16:58:42] 2026-04-21 20:57:34,356 | INFO     | extracted standard info from prmon json
[2026-04-21 16:58:42] 2026-04-21 20:57:34,356 | INFO     | extracted standard memory fields from prmon json
[2026-04-21 16:58:42] 2026-04-21 20:57:34,356 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-21 16:58:42] 2026-04-21 20:57:34,356 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-21 16:58:42] 2026-04-21 20:57:34,357 | INFO     | fitting pss+swap vs Time
[2026-04-21 16:58:42] 2026-04-21 20:57:34,357 | INFO     | sum of square deviations: 183761585.0
[2026-04-21 16:58:42] 2026-04-21 20:57:34,357 | INFO     | sum of deviations: 6986924140.0
[2026-04-21 16:58:42] 2026-04-21 20:57:34,357 | INFO     | mean x (centered): 0.0
[2026-04-21 16:58:42] 2026-04-21 20:57:34,357 | INFO     | mean y: 2693468.238095238
[2026-04-21 16:58:42] 2026-04-21 20:57:34,357 | INFO     | intersect: 2693468.238095238
[2026-04-21 16:58:42] 2026-04-21 20:57:34,358 | INFO     | chi2: 2.184813676234237
[2026-04-21 16:58:42] 2026-04-21 20:57:34,358 | INFO     | current memory leak: 38.02 B/s (using 84 data points, chi2=2.18)
[2026-04-21 16:58:42] 2026-04-21 20:57:34,358 | INFO     | could have reported an average CPU frequency of 3799 MHz (7 samples)
[2026-04-21 16:58:42] 2026-04-21 20:57:34,358 | INFO     | ..............................
[2026-04-21 16:58:42] 2026-04-21 20:57:34,358 | INFO     | . Timing measurements:
[2026-04-21 16:58:42] 2026-04-21 20:57:34,358 | INFO     | . get job = 0 s
[2026-04-21 16:58:42] 2026-04-21 20:57:34,358 | INFO     | . initial setup = 61 s
[2026-04-21 16:58:42] 2026-04-21 20:57:34,358 | INFO     | . payload setup = 121 s
[2026-04-21 16:58:42] 2026-04-21 20:57:34,358 | INFO     | . stage-in = 0 s
[2026-04-21 16:58:42] 2026-04-21 20:57:34,358 | INFO     | . payload execution = 5565 s
[2026-04-21 16:58:42] 2026-04-21 20:57:34,358 | INFO     | . stage-out = 0 s
[2026-04-21 16:58:42] 2026-04-21 20:57:34,358 | INFO     | . log creation = 0 s
[2026-04-21 16:58:42] 2026-04-21 20:57:34,358 | INFO     | ..............................
[2026-04-21 16:58:42] 2026-04-21 20:57:34,713 | INFO     | 
[2026-04-21 16:58:42] 2026-04-21 20:57:34,713 | INFO     | job summary report
[2026-04-21 16:58:42] 2026-04-21 20:57:34,713 | INFO     | --------------------------------------------------
[2026-04-21 16:58:42] 2026-04-21 20:57:34,713 | INFO     | PanDA job id: 7105647331
[2026-04-21 16:58:42] 2026-04-21 20:57:34,713 | INFO     | task id: 49820244
[2026-04-21 16:58:42] 2026-04-21 20:57:34,713 | INFO     | errors: (none)
[2026-04-21 16:58:42] 2026-04-21 20:57:34,713 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-21 16:58:42] 2026-04-21 20:57:34,713 | INFO     | pilot state: finished 
[2026-04-21 16:58:42] 2026-04-21 20:57:34,713 | INFO     | transexitcode: 0
[2026-04-21 16:58:42] 2026-04-21 20:57:34,713 | INFO     | exeerrorcode: 0
[2026-04-21 16:58:42] 2026-04-21 20:57:34,713 | INFO     | exeerrordiag: 
[2026-04-21 16:58:42] 2026-04-21 20:57:34,713 | INFO     | exitcode: 0
[2026-04-21 16:58:42] 2026-04-21 20:57:34,713 | INFO     | exitmsg: OK
[2026-04-21 16:58:42] 2026-04-21 20:57:34,713 | INFO     | cpuconsumptiontime: 40441 s
[2026-04-21 16:58:42] 2026-04-21 20:57:34,713 | INFO     | nevents: 400
[2026-04-21 16:58:42] 2026-04-21 20:57:34,713 | INFO     | neventsw: 0
[2026-04-21 16:58:42] 2026-04-21 20:57:34,713 | INFO     | pid: 1642166
[2026-04-21 16:58:42] 2026-04-21 20:57:34,714 | INFO     | pgrp: 1642166
[2026-04-21 16:58:42] 2026-04-21 20:57:34,714 | INFO     | corecount: 9
[2026-04-21 16:58:42] 2026-04-21 20:57:34,714 | INFO     | event service: False
[2026-04-21 16:58:42] 2026-04-21 20:57:34,714 | INFO     | sizes: {0: 2274523, 1: 2274834, 2: 2276408, 12: 2276436, 5691: 2303132, 5693: 2312132, 5695: 2312316, 5696: 2312510}
[2026-04-21 16:58:42] 2026-04-21 20:57:34,714 | INFO     | --------------------------------------------------
[2026-04-21 16:58:42] 2026-04-21 20:57:34,714 | INFO     | 
[2026-04-21 16:58:42] 2026-04-21 20:57:34,714 | INFO     | executing command: ls -lF /tmp/boinchome/slots/10
[2026-04-21 16:58:42] 2026-04-21 20:57:34,733 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-21 16:58:42] 2026-04-21 20:57:34,733 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-21 16:58:42] 2026-04-21 20:57:34,733 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-21 16:58:42] 2026-04-21 20:57:34,733 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-21 16:58:42] 2026-04-21 20:57:34,733 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-21 16:58:42] 2026-04-21 20:57:34,733 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-21 16:58:42] 2026-04-21 20:57:34,733 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-21 16:58:42] 2026-04-21 20:57:34,733 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-21 16:58:42] 2026-04-21 20:57:34,733 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-21 16:58:42] 2026-04-21 20:57:34,733 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-21 16:58:42] 2026-04-21 20:57:34,733 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-21 16:58:42] 2026-04-21 20:57:34,734 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-21 16:58:42] 2026-04-21 20:57:34,734 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-21 16:58:42] 2026-04-21 20:57:34,734 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-21 16:58:42] 2026-04-21 20:57:34,734 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-21 16:58:42] 2026-04-21 20:57:34,734 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-21 16:58:42] 2026-04-21 20:57:34,734 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-21 16:58:42] 2026-04-21 20:57:34,734 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-21 16:58:42] 2026-04-21 20:57:34,734 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-21 16:58:42] 2026-04-21 20:57:34,734 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-21 16:58:42] 2026-04-21 20:57:34,734 | INFO     | job 7105647331 has completed (purged errors)
[2026-04-21 16:58:42] 2026-04-21 20:57:34,734 | INFO     | overall cleanup function is called
[2026-04-21 16:58:42] 2026-04-21 20:57:35,742 | INFO     | --- collectZombieJob: --- 10, [1642166]
[2026-04-21 16:58:42] 2026-04-21 20:57:35,742 | INFO     | zombie collector waiting for pid 1642166
[2026-04-21 16:58:42] 2026-04-21 20:57:35,742 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-21 16:58:42] 2026-04-21 20:57:35,742 | INFO     | collected zombie processes
[2026-04-21 16:58:42] 2026-04-21 20:57:35,742 | INFO     | will attempt to kill all subprocesses of pid=1642166
[2026-04-21 16:58:42] 2026-04-21 20:57:36,165 | INFO     | process IDs to be killed: [1642166] (in reverse order)
[2026-04-21 16:58:42] 2026-04-21 20:57:36,339 | WARNING  | found no corresponding commands to process id(s)
[2026-04-21 16:58:42] 2026-04-21 20:57:36,339 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-21 16:58:42] 2026-04-21 20:57:36,369 | INFO     | did not find any defunct processes belonging to 1642166
[2026-04-21 16:58:42] 2026-04-21 20:57:36,397 | INFO     | did not find any defunct processes belonging to 1642166
[2026-04-21 16:58:42] 2026-04-21 20:57:36,397 | INFO     | Ready for new job
[2026-04-21 16:58:42] 2026-04-21 20:57:36,399 | INFO     | **************************************
[2026-04-21 16:58:42] 2026-04-21 20:57:36,399 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-21 16:58:42] 2026-04-21 20:57:36,399 | INFO     | **************************************
[2026-04-21 16:58:42] 2026-04-21 20:57:36,399 | INFO     | 
[2026-04-21 16:58:42] 2026-04-21 20:57:36,404 | INFO     | architecture information:
[2026-04-21 16:58:42] 2026-04-21 20:57:36,404 | INFO     | executing command: cat /etc/os-release
[2026-04-21 16:58:42] 2026-04-21 20:57:36,418 | INFO     | cat /etc/os-release:
[2026-04-21 16:58:42] NAME="CentOS Linux"
[2026-04-21 16:58:42] VERSION="7 (Core)"
[2026-04-21 16:58:42] ID="centos"
[2026-04-21 16:58:42] ID_LIKE="rhel fedora"
[2026-04-21 16:58:42] VERSION_ID="7"
[2026-04-21 16:58:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-21 16:58:42] ANSI_COLOR="0;31"
[2026-04-21 16:58:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-21 16:58:42] HOME_URL="https://www.centos.org/"
[2026-04-21 16:58:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-21 16:58:42] 
[2026-04-21 16:58:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-21 16:58:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-21 16:58:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-21 16:58:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-21 16:58:42] 
[2026-04-21 16:58:42] 2026-04-21 20:57:36,419 | INFO     | **************************************
[2026-04-21 16:58:42] 2026-04-21 20:57:36,921 | INFO     | executing command: df -mP /tmp/boinchome/slots/10
[2026-04-21 16:58:42] 2026-04-21 20:57:36,937 | INFO     | sufficient remaining disk space (169547399168 B)
[2026-04-21 16:58:42] 2026-04-21 20:57:36,937 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-21 16:58:42] 2026-04-21 20:57:36,937 | INFO     | current server update state: UPDATING_FINAL
[2026-04-21 16:58:42] 2026-04-21 20:57:36,938 | INFO     | update_server=False
[2026-04-21 16:58:42] 2026-04-21 20:57:36,938 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-21 16:58:42] 2026-04-21 20:57:37,035 | INFO     | all data control threads have been joined
[2026-04-21 16:58:42] 2026-04-21 20:57:37,330 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-21 16:58:42] 2026-04-21 20:57:37,330 | INFO     | aborting loop
[2026-04-21 16:58:42] 2026-04-21 20:57:37,537 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-21 16:58:42] 2026-04-21 20:57:37,943 | INFO     | [job] retrieve thread has finished
[2026-04-21 16:58:42] 2026-04-21 20:57:38,031 | INFO     | all payload control threads have been joined
[2026-04-21 16:58:42] 2026-04-21 20:57:38,041 | INFO     | [data] control thread has finished
[2026-04-21 16:58:42] 2026-04-21 20:57:38,166 | INFO     | [job] create_data_payload thread has finished
[2026-04-21 16:58:42] 2026-04-21 20:57:38,202 | INFO     | [payload] execute_payloads thread has finished
[2026-04-21 16:58:42] 2026-04-21 20:57:38,248 | INFO     | all job control threads have been joined
[2026-04-21 16:58:42] 2026-04-21 20:57:38,335 | INFO     | [job] job monitor thread has finished
[2026-04-21 16:58:42] 2026-04-21 20:57:38,563 | INFO     | [job] validate thread has finished
[2026-04-21 16:58:42] 2026-04-21 20:57:38,731 | INFO     | [data] copytool_in thread has finished
[2026-04-21 16:58:42] 2026-04-21 20:57:38,816 | INFO     | [payload] validate_post thread has finished
[2026-04-21 16:58:42] 2026-04-21 20:57:39,037 | INFO     | [payload] control thread has finished
[2026-04-21 16:58:42] 2026-04-21 20:57:39,140 | INFO     | [payload] validate_pre thread has finished
[2026-04-21 16:58:42] 2026-04-21 20:57:39,143 | INFO     | [payload] failed_post thread has finished
[2026-04-21 16:58:42] 2026-04-21 20:57:39,253 | INFO     | [job] control thread has finished
[2026-04-21 16:58:42] 2026-04-21 20:57:39,422 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-21 16:58:42] 2026-04-21 20:57:39,543 | INFO     | [data] copytool_out thread has finished
[2026-04-21 16:58:42] 2026-04-21 20:57:40,349 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-21 16:58:42] 2026-04-21 20:57:40,427 | INFO     | [job] queue monitor thread has finished
[2026-04-21 16:58:42] 2026-04-21 20:57:44,356 | INFO     | [data] queue_monitor thread has finished
[2026-04-21 16:58:42] 2026-04-21 20:57:47,585 | INFO     | job.realtimelogging is not enabled
[2026-04-21 16:58:42] 2026-04-21 20:57:48,590 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-21 16:58:42] 2026-04-21 20:58:06,091 | INFO     | 5771s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-04-21 16:58:42] 2026-04-21 20:58:07,692 | INFO     | PID=1621676 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-21 16:58:42] 2026-04-21 20:58:07,692 | INFO     | .. there are 41 such processes running
[2026-04-21 16:58:42] 2026-04-21 20:58:07,692 | INFO     | found 0 job(s) in 20 queues
[2026-04-21 16:58:42] 2026-04-21 20:58:07,692 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-21 16:58:42] 2026-04-21 20:58:07,692 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-21 16:58:42] 2026-04-21 20:58:35,565 | INFO     | [monitor] cgroup control has ended
[2026-04-21 16:58:42] 2026-04-21 20:58:36,565 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140378817566528)>', '<ExcThread(monitor, started 140378534852352)>']
[2026-04-21 16:58:42] 2026-04-21 20:58:36,841 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-21 16:58:42] 2026-04-21 20:58:36,842 | INFO     | [monitor] control thread has ended
[2026-04-21 16:58:42] 2026-04-21 20:58:41,590 | INFO     | all workflow threads have been joined
[2026-04-21 16:58:42] 2026-04-21 20:58:41,590 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-21 16:58:42] 2026-04-21 20:58:41,590 | INFO     | traces error code: 0
[2026-04-21 16:58:42] 2026-04-21 20:58:41,591 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-21 16:58:42] 2026-04-21 20:58:41,750 [wrapper] ==== pilot stdout END ====
[2026-04-21 16:58:42] 2026-04-21 20:58:41,753 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-21 16:58:42] 2026-04-21 20:58:41,756 [wrapper] pilotpid: 1621676
[2026-04-21 16:58:42] 2026-04-21 20:58:41,759 [wrapper] Pilot exit status: 0
[2026-04-21 16:58:42] 2026-04-21 20:58:41,776 [wrapper] pandaids: 7105647331
[2026-04-21 16:58:42] 2026-04-21 20:58:41,910 [wrapper] cleanup supervisor_pilot 2909122 1621677
[2026-04-21 16:58:42] 2026-04-21 20:58:41,913 [wrapper] Test setup, not cleaning
[2026-04-21 16:58:42] 2026-04-21 20:58:41,917 [wrapper] apfmon messages muted
[2026-04-21 16:58:42] 2026-04-21 20:58:41,919 [wrapper] ==== wrapper stdout END ====
[2026-04-21 16:58:42] 2026-04-21 20:58:41,921 [wrapper] ==== wrapper stderr END ====
[2026-04-21 16:58:42]  *** Error codes and diagnostics ***
[2026-04-21 16:58:42]     "exeErrorCode": 0,
[2026-04-21 16:58:42]     "pilotErrorCode": 0,
[2026-04-21 16:58:42]  *** Listing of results directory ***
[2026-04-21 16:58:42] total 2461944
[2026-04-21 16:58:42] -rwx------. 1 boincer umatlas      36322 Apr 21 07:11 runpilot2-wrapper.sh
[2026-04-21 16:58:42] -rw-r--r--. 1 boincer umatlas     644190 Apr 21 13:04 pilot3.tar.gz
[2026-04-21 16:58:42] -rw-r--r--. 1 boincer umatlas       5094 Apr 21 13:27 queuedata.json
[2026-04-21 16:58:42] -rw-r--r--. 1 boincer umatlas        100 Apr 21 15:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-21 16:58:42] -rwxr-xr-x. 1 boincer umatlas       7986 Apr 21 15:19 run_atlas
[2026-04-21 16:58:42] -rw-r--r--. 1 boincer umatlas        105 Apr 21 15:19 job.xml
[2026-04-21 16:58:42] -rw-r--r--. 2 boincer umatlas 2236782835 Apr 21 15:19 EVNT.49820242._000039.pool.root.1
[2026-04-21 16:58:42] drwxrwx--x. 2 boincer umatlas       4096 Apr 21 15:19 shared
[2026-04-21 16:58:42] -rw-r--r--. 2 boincer umatlas     656925 Apr 21 15:19 input.tar.gz
[2026-04-21 16:58:42] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 15:19 start_atlas.sh
[2026-04-21 16:58:42] -rw-r--r--. 1 boincer umatlas          0 Apr 21 15:19 boinc_lockfile
[2026-04-21 16:58:42] -rw-r--r--. 1 boincer umatlas       2551 Apr 21 15:19 pandaJob.out
[2026-04-21 16:58:42] -rw-------. 1 boincer umatlas         57 Apr 21 15:19 setup.sh.local
[2026-04-21 16:58:42] -rw-------. 1 boincer umatlas    1509089 Apr 21 15:21 agis_ddmendpoints.agis.ALL.json
[2026-04-21 16:58:42] -rw-------. 1 boincer umatlas        430 Apr 21 15:22 workernode_map.json
[2026-04-21 16:58:42] -rw-------. 1 boincer umatlas     997082 Apr 21 15:22 agis_schedconf.cvmfs.json
[2026-04-21 16:58:42] drwx------. 5 boincer umatlas       4096 Apr 21 15:22 pilot3
[2026-04-21 16:58:42] -rw-------. 1 boincer umatlas  278092984 Apr 21 16:56 HITS.49820244._015410.pool.root.1
[2026-04-21 16:58:42] -rw-r--r--. 1 boincer umatlas        488 Apr 21 16:57 boinc_task_state.xml
[2026-04-21 16:58:42] -rw-------. 1 boincer umatlas         95 Apr 21 16:57 pilot_heartbeat.json
[2026-04-21 16:58:42] -rw-r--r--. 1 boincer umatlas       7088 Apr 21 16:57 init_data.xml
[2026-04-21 16:58:42] -rw-------. 1 boincer umatlas       1047 Apr 21 16:57 memory_monitor_summary.json
[2026-04-21 16:58:42] -rw-------. 1 boincer umatlas     511851 Apr 21 16:57 log.49820244._015410.job.log.tgz.1
[2026-04-21 16:58:42] -rw-------. 1 boincer umatlas       6380 Apr 21 16:57 heartbeat_new.json
[2026-04-21 16:58:42] -rw-------. 1 boincer umatlas       6271 Apr 21 16:57 heartbeat.json
[2026-04-21 16:58:42] -rw-r--r--. 1 boincer umatlas       8192 Apr 21 16:58 boinc_mmap_file
[2026-04-21 16:58:42] -rw-r--r--. 1 boincer umatlas         27 Apr 21 16:58 wrapper_checkpoint.txt
[2026-04-21 16:58:42] -rw-------. 1 boincer umatlas       5008 Apr 21 16:58 pilotlog.txt
[2026-04-21 16:58:42] -rw-------. 1 boincer umatlas     538737 Apr 21 16:58 log.49820244._015410.job.log.1
[2026-04-21 16:58:42] -rw-------. 1 boincer umatlas        357 Apr 21 16:58 output.list
[2026-04-21 16:58:42] -rw-r--r--. 1 boincer umatlas        410 Apr 21 16:58 runtime_log
[2026-04-21 16:58:42] -rw-------. 1 boincer umatlas    1064960 Apr 21 16:58 result.tar.gz
[2026-04-21 16:58:42] -rw-r--r--. 1 boincer umatlas       8971 Apr 21 16:58 runtime_log.err
[2026-04-21 16:58:42] -rw-------. 1 boincer umatlas        656 Apr 21 16:58 5b3c3b06177d.diag
[2026-04-21 16:58:42] -rw-r--r--. 1 boincer umatlas      21186 Apr 21 16:58 stderr.txt
[2026-04-21 16:58:42] HITS file was successfully produced:
[2026-04-21 16:58:42] -rw-------. 1 boincer umatlas 278092984 Apr 21 16:56 shared/HITS.pool.root.1
[2026-04-21 16:58:42]  *** Contents of shared directory: ***
[2026-04-21 16:58:42] total 2457644
[2026-04-21 16:58:42] -rw-r--r--. 2 boincer umatlas 2236782835 Apr 21 15:19 ATLAS.root_0
[2026-04-21 16:58:42] -rw-r--r--. 2 boincer umatlas     656925 Apr 21 15:19 input.tar.gz
[2026-04-21 16:58:42] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 15:19 start_atlas.sh
[2026-04-21 16:58:42] -rw-------. 1 boincer umatlas  278092984 Apr 21 16:56 HITS.pool.root.1
[2026-04-21 16:58:42] -rw-------. 1 boincer umatlas    1064960 Apr 21 16:58 result.tar.gz
16:58:43 (1605770): run_atlas exited; CPU time 40649.729871
16:58:43 (1605770): called boinc_finish(0)

</stderr_txt>
]]>

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