Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:57:28 (1328868): wrapper (7.7.26015): starting
14:57:28 (1328868): wrapper: running run_atlas (--nthreads 8)
[2026-04-21 14:57:28] Arguments: --nthreads 8
[2026-04-21 14:57:28] Threads: 8
[2026-04-21 14:57:28] Checking for CVMFS
[2026-04-21 14:57:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-21 14:57:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-21 14:57:29] Running cvmfs_config stat atlas.cern.ch
[2026-04-21 14:57:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-21 14:57:30] 2.13.3.0 2758065 109367 514548 158700 2 585 23768358 32935936 25199 16776704 0 523596072 99.670 516035548 29286 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-21 14:57:30] CVMFS is ok
[2026-04-21 14:57:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 14:57:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 14:57:30] Further information can be found at the LHC@home message board.
[2026-04-21 14:57:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 14:57:30] Checking for apptainer binary...
[2026-04-21 14:57:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-21 14:57:30] Running /usr/bin/apptainer --version
[2026-04-21 14:57:30] apptainer version 1.4.5-2.el9
[2026-04-21 14:57:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 14:57:31] c6-12-29-1.aglt2.org
[2026-04-21 14:57:31] apptainer works
[2026-04-21 14:57:31] Set ATHENA_PROC_NUMBER=8
[2026-04-21 14:57:31] Set ATHENA_CORE_NUMBER=8
[2026-04-21 14:57:31] Starting ATLAS job with PandaID=7105532921
[2026-04-21 14:57:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-21 21:05:47]  *** The last 200 lines of the pilot log: ***
[2026-04-21 21:05:47] 2026-04-22 01:05:08,092 | INFO     | summary of transferred files:
[2026-04-21 21:05:47] 2026-04-22 01:05:08,092 | INFO     |  -- lfn=log.49820244._015298.job.log.tgz.1, status_code=0, status=transferred
[2026-04-21 21:05:47] 2026-04-22 01:05:08,092 | INFO     | stage-out finished correctly
[2026-04-21 21:05:47] 2026-04-22 01:05:08,205 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-21 21:05:47] 2026-04-22 01:05:08,586 | INFO     | job 7105532921 has state=finished
[2026-04-21 21:05:47] 2026-04-22 01:05:08,586 | INFO     | preparing for final server update for job 7105532921 in state='finished'
[2026-04-21 21:05:47] 2026-04-22 01:05:08,587 | INFO     | reading metadata from: /tmp/boinchome/slots/2/PanDA_Pilot-7105532921/jobReport.json
[2026-04-21 21:05:47] 2026-04-22 01:05:08,592 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/2/workernode_map.json
[2026-04-21 21:05:47] 2026-04-22 01:05:08,593 | INFO     | this job has now completed (state=finished)
[2026-04-21 21:05:47] 2026-04-22 01:05:08,594 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-21 21:05:47] 2026-04-22 01:05:08,594 | INFO     | log transfer has been attempted: DONE
[2026-04-21 21:05:47] 2026-04-22 01:05:08,594 | INFO     | job 7105532921 has finished - writing final server update
[2026-04-21 21:05:47] 2026-04-22 01:05:08,595 | INFO     | total number of processed events: 400 (read)
[2026-04-21 21:05:47] 2026-04-22 01:05:08,610 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7105532921/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 21:05:47] 2026-04-22 01:05:08,612 | INFO     | extracted standard info from prmon json
[2026-04-21 21:05:47] 2026-04-22 01:05:08,612 | INFO     | extracted standard memory fields from prmon json
[2026-04-21 21:05:47] 2026-04-22 01:05:08,612 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-21 21:05:47] 2026-04-22 01:05:08,612 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-21 21:05:47] 2026-04-22 01:05:08,619 | INFO     | fitting pss+swap vs Time
[2026-04-21 21:05:47] 2026-04-22 01:05:08,620 | INFO     | sum of square deviations: 14346177320.579334
[2026-04-21 21:05:47] 2026-04-22 01:05:08,624 | INFO     | sum of deviations: 150457749023.03073
[2026-04-21 21:05:47] 2026-04-22 01:05:08,624 | INFO     | mean x (centered): 0.0
[2026-04-21 21:05:47] 2026-04-22 01:05:08,624 | INFO     | mean y: 2509824.8551532035
[2026-04-21 21:05:47] 2026-04-22 01:05:08,624 | INFO     | intersect: 2509824.8551532035
[2026-04-21 21:05:47] 2026-04-22 01:05:08,625 | INFO     | chi2: 3.836490303578072
[2026-04-21 21:05:47] 2026-04-22 01:05:08,626 | INFO     | sum of square deviations: 13755079847.084759
[2026-04-21 21:05:47] 2026-04-22 01:05:08,629 | INFO     | sum of deviations: 170189624544.10156
[2026-04-21 21:05:47] 2026-04-22 01:05:08,629 | INFO     | mean x (centered): 0.0
[2026-04-21 21:05:47] 2026-04-22 01:05:08,629 | INFO     | mean y: 2514848.838983051
[2026-04-21 21:05:47] 2026-04-22 01:05:08,629 | INFO     | intersect: 2514848.838983051
[2026-04-21 21:05:47] 2026-04-22 01:05:08,630 | INFO     | chi2: 3.1634908486674203
[2026-04-21 21:05:47] 2026-04-22 01:05:08,630 | INFO     | current chi2=3.1634908486674203 (change=17.542060624602236 %)
[2026-04-21 21:05:47] 2026-04-22 01:05:08,630 | INFO     | right removable region: 353
[2026-04-21 21:05:47] 2026-04-22 01:05:08,631 | INFO     | sum of square deviations: 13754982857.084757
[2026-04-21 21:05:47] 2026-04-22 01:05:08,634 | INFO     | sum of deviations: 52501374114.694916
[2026-04-21 21:05:47] 2026-04-22 01:05:08,634 | INFO     | mean x (centered): 0.0
[2026-04-21 21:05:47] 2026-04-22 01:05:08,634 | INFO     | mean y: 2535029.9830508474
[2026-04-21 21:05:47] 2026-04-22 01:05:08,634 | INFO     | intersect: 2535029.9830508474
[2026-04-21 21:05:47] 2026-04-22 01:05:08,635 | INFO     | chi2: 0.9610327867457643
[2026-04-21 21:05:47] 2026-04-22 01:05:08,635 | INFO     | current chi2=0.9610327867457643 (change=74.9502094179812 %)
[2026-04-21 21:05:47] 2026-04-22 01:05:08,636 | INFO     | sum of square deviations: 13180297128.372412
[2026-04-21 21:05:47] 2026-04-22 01:05:08,639 | INFO     | sum of deviations: 25885062845.908276
[2026-04-21 21:05:47] 2026-04-22 01:05:08,639 | INFO     | mean x (centered): 0.0
[2026-04-21 21:05:47] 2026-04-22 01:05:08,639 | INFO     | mean y: 2542075.166189112
[2026-04-21 21:05:47] 2026-04-22 01:05:08,640 | INFO     | intersect: 2542075.166189112
[2026-04-21 21:05:47] 2026-04-22 01:05:08,640 | INFO     | chi2: 0.7718977061144012
[2026-04-21 21:05:47] 2026-04-22 01:05:08,640 | INFO     | current chi2=0.7718977061144012 (change=19.680398342267765 %)
[2026-04-21 21:05:47] 2026-04-22 01:05:08,640 | INFO     | left removable region: 10
[2026-04-21 21:05:47] 2026-04-22 01:05:08,641 | INFO     | sum of square deviations: 12512144851.136944
[2026-04-21 21:05:47] 2026-04-22 01:05:08,644 | INFO     | sum of deviations: 46552800923.58308
[2026-04-21 21:05:47] 2026-04-22 01:05:08,645 | INFO     | mean x (centered): 0.0
[2026-04-21 21:05:47] 2026-04-22 01:05:08,645 | INFO     | mean y: 2547647.798833819
[2026-04-21 21:05:47] 2026-04-22 01:05:08,645 | INFO     | intersect: 2547647.798833819
[2026-04-21 21:05:47] 2026-04-22 01:05:08,645 | INFO     | chi2: 0.0811582147283927
[2026-04-21 21:05:47] 2026-04-22 01:05:08,646 | INFO     | current memory leak: 3.72 B/s (using 343 data points, chi2=0.08)
[2026-04-21 21:05:47] 2026-04-22 01:05:08,647 | INFO     | could have reported an average CPU frequency of 2656 MHz (16 samples)
[2026-04-21 21:05:47] 2026-04-22 01:05:08,647 | INFO     | ..............................
[2026-04-21 21:05:47] 2026-04-22 01:05:08,647 | INFO     | . Timing measurements:
[2026-04-21 21:05:47] 2026-04-22 01:05:08,647 | INFO     | . get job = 0 s
[2026-04-21 21:05:47] 2026-04-22 01:05:08,647 | INFO     | . initial setup = 31 s
[2026-04-21 21:05:47] 2026-04-22 01:05:08,647 | INFO     | . payload setup = 58 s
[2026-04-21 21:05:47] 2026-04-22 01:05:08,647 | INFO     | . stage-in = 0 s
[2026-04-21 21:05:47] 2026-04-22 01:05:08,647 | INFO     | . payload execution = 21884 s
[2026-04-21 21:05:47] 2026-04-22 01:05:08,647 | INFO     | . stage-out = 2 s
[2026-04-21 21:05:47] 2026-04-22 01:05:08,647 | INFO     | . log creation = 0 s
[2026-04-21 21:05:47] 2026-04-22 01:05:08,647 | INFO     | ..............................
[2026-04-21 21:05:47] 2026-04-22 01:05:08,755 | INFO     | 
[2026-04-21 21:05:47] 2026-04-22 01:05:08,755 | INFO     | job summary report
[2026-04-21 21:05:47] 2026-04-22 01:05:08,756 | INFO     | --------------------------------------------------
[2026-04-21 21:05:47] 2026-04-22 01:05:08,756 | INFO     | PanDA job id: 7105532921
[2026-04-21 21:05:47] 2026-04-22 01:05:08,756 | INFO     | task id: 49820244
[2026-04-21 21:05:47] 2026-04-22 01:05:08,756 | INFO     | errors: (none)
[2026-04-21 21:05:47] 2026-04-22 01:05:08,756 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-21 21:05:47] 2026-04-22 01:05:08,756 | INFO     | pilot state: finished 
[2026-04-21 21:05:47] 2026-04-22 01:05:08,757 | INFO     | transexitcode: 0
[2026-04-21 21:05:47] 2026-04-22 01:05:08,757 | INFO     | exeerrorcode: 0
[2026-04-21 21:05:47] 2026-04-22 01:05:08,757 | INFO     | exeerrordiag: 
[2026-04-21 21:05:47] 2026-04-22 01:05:08,757 | INFO     | exitcode: 0
[2026-04-21 21:05:47] 2026-04-22 01:05:08,757 | INFO     | exitmsg: OK
[2026-04-21 21:05:47] 2026-04-22 01:05:08,757 | INFO     | cpuconsumptiontime: 77641 s
[2026-04-21 21:05:47] 2026-04-22 01:05:08,757 | INFO     | nevents: 400
[2026-04-21 21:05:47] 2026-04-22 01:05:08,757 | INFO     | neventsw: 0
[2026-04-21 21:05:47] 2026-04-22 01:05:08,758 | INFO     | pid: 1340973
[2026-04-21 21:05:47] 2026-04-22 01:05:08,758 | INFO     | pgrp: 1340973
[2026-04-21 21:05:47] 2026-04-22 01:05:08,758 | INFO     | corecount: 8
[2026-04-21 21:05:47] 2026-04-22 01:05:08,758 | INFO     | event service: False
[2026-04-21 21:05:47] 2026-04-22 01:05:08,758 | INFO     | sizes: {0: 2274576, 1: 2274576, 2: 2274977, 3: 2274977, 4: 2276461, 15: 2276461, 21946: 2311164, 21949: 2320218, 21950: 2320356}
[2026-04-21 21:05:47] 2026-04-22 01:05:08,758 | INFO     | --------------------------------------------------
[2026-04-21 21:05:47] 2026-04-22 01:05:08,758 | INFO     | 
[2026-04-21 21:05:47] 2026-04-22 01:05:08,759 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-04-21 21:05:47] 2026-04-22 01:05:08,779 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-21 21:05:47] 2026-04-22 01:05:08,779 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-21 21:05:47] 2026-04-22 01:05:08,780 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-21 21:05:47] 2026-04-22 01:05:08,780 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-21 21:05:47] 2026-04-22 01:05:08,780 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-21 21:05:47] 2026-04-22 01:05:08,780 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-21 21:05:47] 2026-04-22 01:05:08,780 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-21 21:05:47] 2026-04-22 01:05:08,780 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-21 21:05:47] 2026-04-22 01:05:08,780 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-21 21:05:47] 2026-04-22 01:05:08,781 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-21 21:05:47] 2026-04-22 01:05:08,781 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-21 21:05:47] 2026-04-22 01:05:08,781 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-21 21:05:47] 2026-04-22 01:05:08,781 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-21 21:05:47] 2026-04-22 01:05:08,781 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-21 21:05:47] 2026-04-22 01:05:08,781 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-21 21:05:47] 2026-04-22 01:05:08,781 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-21 21:05:47] 2026-04-22 01:05:08,782 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-21 21:05:47] 2026-04-22 01:05:08,782 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-21 21:05:47] 2026-04-22 01:05:08,782 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-21 21:05:47] 2026-04-22 01:05:08,782 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-21 21:05:47] 2026-04-22 01:05:08,782 | INFO     | job 7105532921 has completed (purged errors)
[2026-04-21 21:05:47] 2026-04-22 01:05:08,783 | INFO     | overall cleanup function is called
[2026-04-21 21:05:47] 2026-04-22 01:05:09,790 | INFO     | --- collectZombieJob: --- 10, [1340973]
[2026-04-21 21:05:47] 2026-04-22 01:05:09,791 | INFO     | zombie collector waiting for pid 1340973
[2026-04-21 21:05:47] 2026-04-22 01:05:09,791 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-21 21:05:47] 2026-04-22 01:05:09,791 | INFO     | collected zombie processes
[2026-04-21 21:05:47] 2026-04-22 01:05:09,791 | INFO     | will attempt to kill all subprocesses of pid=1340973
[2026-04-21 21:05:47] 2026-04-22 01:05:10,227 | INFO     | process IDs to be killed: [1340973] (in reverse order)
[2026-04-21 21:05:47] 2026-04-22 01:05:10,354 | WARNING  | found no corresponding commands to process id(s)
[2026-04-21 21:05:47] 2026-04-22 01:05:10,355 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-21 21:05:47] 2026-04-22 01:05:10,374 | INFO     | did not find any defunct processes belonging to 1340973
[2026-04-21 21:05:47] 2026-04-22 01:05:10,393 | INFO     | did not find any defunct processes belonging to 1340973
[2026-04-21 21:05:47] 2026-04-22 01:05:10,393 | INFO     | Ready for new job
[2026-04-21 21:05:47] 2026-04-22 01:05:10,396 | INFO     | **************************************
[2026-04-21 21:05:47] 2026-04-22 01:05:10,396 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-21 21:05:47] 2026-04-22 01:05:10,396 | INFO     | **************************************
[2026-04-21 21:05:47] 2026-04-22 01:05:10,396 | INFO     | 
[2026-04-21 21:05:47] 2026-04-22 01:05:10,401 | INFO     | architecture information:
[2026-04-21 21:05:47] 2026-04-22 01:05:10,402 | INFO     | executing command: cat /etc/os-release
[2026-04-21 21:05:47] 2026-04-22 01:05:10,422 | INFO     | cat /etc/os-release:
[2026-04-21 21:05:47] NAME="CentOS Linux"
[2026-04-21 21:05:47] VERSION="7 (Core)"
[2026-04-21 21:05:47] ID="centos"
[2026-04-21 21:05:47] ID_LIKE="rhel fedora"
[2026-04-21 21:05:47] VERSION_ID="7"
[2026-04-21 21:05:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-21 21:05:47] ANSI_COLOR="0;31"
[2026-04-21 21:05:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-21 21:05:47] HOME_URL="https://www.centos.org/"
[2026-04-21 21:05:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-21 21:05:47] 
[2026-04-21 21:05:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-21 21:05:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-21 21:05:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-21 21:05:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-21 21:05:47] 
[2026-04-21 21:05:47] 2026-04-22 01:05:10,422 | INFO     | **************************************
[2026-04-21 21:05:47] 2026-04-22 01:05:10,925 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-04-21 21:05:47] 2026-04-22 01:05:10,946 | INFO     | sufficient remaining disk space (89952092160 B)
[2026-04-21 21:05:47] 2026-04-22 01:05:10,947 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-21 21:05:47] 2026-04-22 01:05:10,947 | INFO     | current server update state: UPDATING_FINAL
[2026-04-21 21:05:47] 2026-04-22 01:05:10,947 | INFO     | update_server=False
[2026-04-21 21:05:47] 2026-04-22 01:05:10,947 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-21 21:05:47] 2026-04-22 01:05:11,058 | INFO     | all job control threads have been joined
[2026-04-21 21:05:47] 2026-04-22 01:05:11,208 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-21 21:05:47] 2026-04-22 01:05:11,241 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-21 21:05:47] 2026-04-22 01:05:11,242 | INFO     | aborting loop
[2026-04-21 21:05:47] 2026-04-22 01:05:11,414 | INFO     | all data control threads have been joined
[2026-04-21 21:05:47] 2026-04-22 01:05:11,950 | INFO     | [job] retrieve thread has finished
[2026-04-21 21:05:47] 2026-04-22 01:05:12,042 | INFO     | [payload] execute_payloads thread has finished
[2026-04-21 21:05:47] 2026-04-22 01:05:12,063 | INFO     | [job] control thread has finished
[2026-04-21 21:05:47] 2026-04-22 01:05:12,169 | INFO     | [data] copytool_in thread has finished
[2026-04-21 21:05:47] 2026-04-22 01:05:12,211 | INFO     | [payload] validate_pre thread has finished
[2026-04-21 21:05:47] 2026-04-22 01:05:12,242 | INFO     | [payload] failed_post thread has finished
[2026-04-21 21:05:47] 2026-04-22 01:05:12,247 | INFO     | [job] job monitor thread has finished
[2026-04-21 21:05:47] 2026-04-22 01:05:12,363 | INFO     | all payload control threads have been joined
[2026-04-21 21:05:47] 2026-04-22 01:05:12,413 | INFO     | [job] validate thread has finished
[2026-04-21 21:05:47] 2026-04-22 01:05:12,416 | INFO     | [data] control thread has finished
[2026-04-21 21:05:47] 2026-04-22 01:05:12,621 | INFO     | [job] create_data_payload thread has finished
[2026-04-21 21:05:47] 2026-04-22 01:05:12,859 | INFO     | [payload] validate_post thread has finished
[2026-04-21 21:05:47] 2026-04-22 01:05:13,214 | INFO     | [data] copytool_out thread has finished
[2026-04-21 21:05:47] 2026-04-22 01:05:13,285 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-21 21:05:47] 2026-04-22 01:05:13,369 | INFO     | [payload] control thread has finished
[2026-04-21 21:05:47] 2026-04-22 01:05:13,765 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-21 21:05:47] 2026-04-22 01:05:14,304 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-21 21:05:47] 2026-04-22 01:05:14,770 | INFO     | [job] queue monitor thread has finished
[2026-04-21 21:05:47] 2026-04-22 01:05:18,310 | INFO     | [data] queue_monitor thread has finished
[2026-04-21 21:05:47] 2026-04-22 01:05:40,151 | INFO     | [monitor] cgroup control has ended
[2026-04-21 21:05:47] 2026-04-22 01:05:40,654 | INFO     | PID=1333335 has CPU usage=8.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-21 21:05:47] 2026-04-22 01:05:40,655 | INFO     | .. there are 27 such processes running
[2026-04-21 21:05:47] 2026-04-22 01:05:40,655 | INFO     | found 0 job(s) in 20 queues
[2026-04-21 21:05:47] 2026-04-22 01:05:40,656 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-21 21:05:47] 2026-04-22 01:05:40,656 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-21 21:05:47] 2026-04-22 01:05:42,155 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139829788710720)>', '<ExcThread(monitor, started 139829119522560)>']
[2026-04-21 21:05:47] 2026-04-22 01:05:42,665 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-21 21:05:47] 2026-04-22 01:05:42,666 | INFO     | [monitor] control thread has ended
[2026-04-21 21:05:47] 2026-04-22 01:05:47,180 | INFO     | all workflow threads have been joined
[2026-04-21 21:05:47] 2026-04-22 01:05:47,181 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-21 21:05:47] 2026-04-22 01:05:47,181 | INFO     | traces error code: 0
[2026-04-21 21:05:47] 2026-04-22 01:05:47,181 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-21 21:05:47] 2026-04-22 01:05:47,456 [wrapper] ==== pilot stdout END ====
[2026-04-21 21:05:47] 2026-04-22 01:05:47,460 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-21 21:05:47] 2026-04-22 01:05:47,464 [wrapper] pilotpid: 1333335
[2026-04-21 21:05:47] 2026-04-22 01:05:47,468 [wrapper] Pilot exit status: 0
[2026-04-21 21:05:47] 2026-04-22 01:05:47,478 [wrapper] pandaids: 7105532921
[2026-04-21 21:05:47] 2026-04-22 01:05:47,539 [wrapper] cleanup supervisor_pilot 2436010 1333336
[2026-04-21 21:05:47] 2026-04-22 01:05:47,542 [wrapper] Test setup, not cleaning
[2026-04-21 21:05:47] 2026-04-22 01:05:47,545 [wrapper] apfmon messages muted
[2026-04-21 21:05:47] 2026-04-22 01:05:47,547 [wrapper] ==== wrapper stdout END ====
[2026-04-21 21:05:47] 2026-04-22 01:05:47,549 [wrapper] ==== wrapper stderr END ====
[2026-04-21 21:05:47]  *** Error codes and diagnostics ***
[2026-04-21 21:05:47]     "exeErrorCode": 0,
[2026-04-21 21:05:47]     "pilotErrorCode": 0,
[2026-04-21 21:05:47]  *** Listing of results directory ***
[2026-04-21 21:05:47] total 2445812
[2026-04-21 21:05:47] -rwx------. 1 boincer umatlas      36322 Apr 21 07:09 runpilot2-wrapper.sh
[2026-04-21 21:05:47] -rw-r--r--. 1 boincer umatlas     644190 Apr 21 13:04 pilot3.tar.gz
[2026-04-21 21:05:47] -rw-r--r--. 1 boincer umatlas       5094 Apr 21 13:27 queuedata.json
[2026-04-21 21:05:47] -rw-r--r--. 1 boincer umatlas        100 Apr 21 14:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-21 21:05:47] -rwxr-xr-x. 1 boincer umatlas       7986 Apr 21 14:57 run_atlas
[2026-04-21 21:05:47] -rw-r--r--. 1 boincer umatlas        105 Apr 21 14:57 job.xml
[2026-04-21 21:05:47] -rw-r--r--. 2 boincer umatlas 2221861413 Apr 21 14:57 EVNT.49820242._000053.pool.root.1
[2026-04-21 21:05:47] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 14:57 start_atlas.sh
[2026-04-21 21:05:47] drwxrwx--x. 2 boincer umatlas       4096 Apr 21 14:57 shared
[2026-04-21 21:05:47] -rw-r--r--. 2 boincer umatlas     656923 Apr 21 14:57 input.tar.gz
[2026-04-21 21:05:47] -rw-r--r--. 1 boincer umatlas          0 Apr 21 14:57 boinc_lockfile
[2026-04-21 21:05:47] -rw-r--r--. 1 boincer umatlas       2550 Apr 21 14:57 pandaJob.out
[2026-04-21 21:05:47] -rw-------. 1 boincer umatlas         57 Apr 21 14:57 setup.sh.local
[2026-04-21 21:05:47] -rw-------. 1 boincer umatlas     995017 Apr 21 14:58 agis_schedconf.cvmfs.json
[2026-04-21 21:05:47] -rw-------. 1 boincer umatlas        444 Apr 21 14:59 workernode_map.json
[2026-04-21 21:05:47] drwx------. 5 boincer umatlas       4096 Apr 21 14:59 pilot3
[2026-04-21 21:05:47] -rw-r--r--. 1 boincer umatlas       6795 Apr 21 21:03 init_data.xml
[2026-04-21 21:05:47] -rw-------. 1 boincer umatlas  273854557 Apr 21 21:04 HITS.49820244._015298.pool.root.1
[2026-04-21 21:05:47] -rw-r--r--. 1 boincer umatlas        490 Apr 21 21:04 boinc_task_state.xml
[2026-04-21 21:05:47] -rw-------. 1 boincer umatlas       1068 Apr 21 21:05 memory_monitor_summary.json
[2026-04-21 21:05:47] -rw-------. 1 boincer umatlas    1509089 Apr 21 21:05 agis_ddmendpoints.agis.ALL.json
[2026-04-21 21:05:47] -rw-------. 1 boincer umatlas     464474 Apr 21 21:05 log.49820244._015298.job.log.tgz.1
[2026-04-21 21:05:47] -rw-------. 1 boincer umatlas       6438 Apr 21 21:05 heartbeat_new.json
[2026-04-21 21:05:47] -rw-------. 1 boincer umatlas       6329 Apr 21 21:05 heartbeat.json
[2026-04-21 21:05:47] -rw-r--r--. 1 boincer umatlas       8192 Apr 21 21:05 boinc_mmap_file
[2026-04-21 21:05:47] -rw-r--r--. 1 boincer umatlas         28 Apr 21 21:05 wrapper_checkpoint.txt
[2026-04-21 21:05:47] -rw-------. 1 boincer umatlas         95 Apr 21 21:05 pilot_heartbeat.json
[2026-04-21 21:05:47] -rw-------. 1 boincer umatlas       4819 Apr 21 21:05 pilotlog.txt
[2026-04-21 21:05:47] -rw-------. 1 boincer umatlas    1903410 Apr 21 21:05 log.49820244._015298.job.log.1
[2026-04-21 21:05:47] -rw-------. 1 boincer umatlas        357 Apr 21 21:05 output.list
[2026-04-21 21:05:47] -rw-r--r--. 1 boincer umatlas        410 Apr 21 21:05 runtime_log
[2026-04-21 21:05:47] -rw-------. 1 boincer umatlas    2385920 Apr 21 21:05 result.tar.gz
[2026-04-21 21:05:47] -rw-r--r--. 1 boincer umatlas       8974 Apr 21 21:05 runtime_log.err
[2026-04-21 21:05:47] -rw-------. 1 boincer umatlas        664 Apr 21 21:05 5afa9f179131.diag
[2026-04-21 21:05:47] -rw-r--r--. 1 boincer umatlas      21231 Apr 21 21:05 stderr.txt
[2026-04-21 21:05:47] HITS file was successfully produced:
[2026-04-21 21:05:47] -rw-------. 1 boincer umatlas 273854557 Apr 21 21:04 shared/HITS.pool.root.1
[2026-04-21 21:05:47]  *** Contents of shared directory: ***
[2026-04-21 21:05:47] total 2440228
[2026-04-21 21:05:47] -rw-r--r--. 2 boincer umatlas 2221861413 Apr 21 14:57 ATLAS.root_0
[2026-04-21 21:05:47] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 14:57 start_atlas.sh
[2026-04-21 21:05:47] -rw-r--r--. 2 boincer umatlas     656923 Apr 21 14:57 input.tar.gz
[2026-04-21 21:05:47] -rw-------. 1 boincer umatlas  273854557 Apr 21 21:04 HITS.pool.root.1
[2026-04-21 21:05:47] -rw-------. 1 boincer umatlas    2385920 Apr 21 21:05 result.tar.gz
21:05:48 (1328868): run_atlas exited; CPU time 78624.625252
21:05:48 (1328868): called boinc_finish(0)

</stderr_txt>
]]>

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