Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:14:34 (21694): wrapper (7.7.26015): starting
00:14:34 (21694): wrapper: running run_atlas (--nthreads 12)
[2026-04-23 00:14:34] Arguments: --nthreads 12
[2026-04-23 00:14:34] Threads: 12
[2026-04-23 00:14:34] Checking for CVMFS
[2026-04-23 00:14:34] No cvmfs_config command found, will try listing directly
[2026-04-23 00:14:34] CVMFS is ok
[2026-04-23 00:14:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-23 00:14:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-23 00:14:34] Further information can be found at the LHC@home message board.
[2026-04-23 00:14:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-23 00:14:34] Checking for apptainer binary...
[2026-04-23 00:14:34] which: no apptainer in ((null))
[2026-04-23 00:14:34] apptainer is not installed, using version from CVMFS
[2026-04-23 00:14:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-23 00:14:34] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot60/slots/21/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut27.grid.cesnet.cz
[2026-04-23 00:14:34] apptainer works
[2026-04-23 00:14:34] Set ATHENA_PROC_NUMBER=12
[2026-04-23 00:14:34] Set ATHENA_CORE_NUMBER=12
[2026-04-23 00:14:34] Starting ATLAS job with PandaID=7105532917
[2026-04-23 00:14:34] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot60/slots/21 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-23 00:48:50]  *** The last 200 lines of the pilot log: ***
[2026-04-23 00:48:50]  filesize=424960
[2026-04-23 00:48:50]  filetype=log
[2026-04-23 00:48:50]  guid=634b5c56-e483-4b86-bb2b-6133efe04f25
[2026-04-23 00:48:50]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-23 00:48:50]  is_altstaged=None
[2026-04-23 00:48:50]  is_tar=False
[2026-04-23 00:48:50]  lfn=log.49820244._015294.job.log.tgz.1
[2026-04-23 00:48:50]  mtime=0
[2026-04-23 00:48:50]  protocol_id=None
[2026-04-23 00:48:50]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-23 00:48:50]  replicas=None
[2026-04-23 00:48:50]  scope=mc23_13p6TeV
[2026-04-23 00:48:50]  status=None
[2026-04-23 00:48:50]  status_code=0
[2026-04-23 00:48:50]  storage_token=
[2026-04-23 00:48:50]  surl=/var/lib/boinc/var/slot60/slots/21/PanDA_Pilot-7105532917/log.49820244._015294.job.log.tgz.1
[2026-04-23 00:48:50]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/68/85/log.49820244._015294.job.log.tgz.1
[2026-04-23 00:48:50]  workdir=None
[2026-04-23 00:48:50] ]
[2026-04-23 00:48:50] 2026-04-22 22:47:45,900 | INFO     | transferring file log.49820244._015294.job.log.tgz.1 from /var/lib/boinc/var/slot60/slots/21/PanDA_Pilot-7105532917/log.49820244._015294.job.log.tgz.1 to /var/lib/
[2026-04-23 00:48:50] 2026-04-22 22:47:45,900 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot60/slots/21/PanDA_Pilot-7105532917/log.49820244._015294.job.log.tgz.1 /var/lib/boinc/var/slot60/slots/21/
[2026-04-23 00:48:50] 2026-04-22 22:47:45,912 | INFO     | adding to output.list: log.49820244._015294.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/68/85/log.49820244._015294.job.log.tg
[2026-04-23 00:48:50] 2026-04-22 22:47:45,912 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-23 00:48:50] 2026-04-22 22:47:45,913 | INFO     | summary of transferred files:
[2026-04-23 00:48:50] 2026-04-22 22:47:45,913 | INFO     |  -- lfn=log.49820244._015294.job.log.tgz.1, status_code=0, status=transferred
[2026-04-23 00:48:50] 2026-04-22 22:47:45,913 | INFO     | stage-out finished correctly
[2026-04-23 00:48:50] 2026-04-22 22:47:45,933 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-23 00:48:50] 2026-04-22 22:47:47,308 | INFO     | job 7105532917 has state=finished
[2026-04-23 00:48:50] 2026-04-22 22:47:47,309 | INFO     | preparing for final server update for job 7105532917 in state='finished'
[2026-04-23 00:48:50] 2026-04-22 22:47:47,309 | INFO     | reading metadata from: /var/lib/boinc/var/slot60/slots/21/PanDA_Pilot-7105532917/jobReport.json
[2026-04-23 00:48:50] 2026-04-22 22:47:47,310 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot60/slots/21/workernode_map.json
[2026-04-23 00:48:50] 2026-04-22 22:47:47,310 | INFO     | this job has now completed (state=finished)
[2026-04-23 00:48:50] 2026-04-22 22:47:47,311 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-23 00:48:50] 2026-04-22 22:47:47,311 | INFO     | log transfer has been attempted: DONE
[2026-04-23 00:48:50] 2026-04-22 22:47:47,311 | INFO     | job 7105532917 has finished - writing final server update
[2026-04-23 00:48:50] 2026-04-22 22:47:47,311 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_4034678/.job.ad'
[2026-04-23 00:48:50] 2026-04-22 22:47:47,311 | INFO     | total number of processed events: 400 (read)
[2026-04-23 00:48:50] 2026-04-22 22:47:47,319 | INFO     | using path: /var/lib/boinc/var/slot60/slots/21/PanDA_Pilot-7105532917/memory_monitor_summary.json (trf name=prmon)
[2026-04-23 00:48:50] 2026-04-22 22:47:47,320 | INFO     | extracted standard info from prmon json
[2026-04-23 00:48:50] 2026-04-22 22:47:47,320 | INFO     | extracted standard memory fields from prmon json
[2026-04-23 00:48:50] 2026-04-22 22:47:47,320 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-23 00:48:50] 2026-04-22 22:47:47,320 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-23 00:48:50] 2026-04-22 22:47:47,320 | INFO     | fitting pss+swap vs Time
[2026-04-23 00:48:50] 2026-04-22 22:47:47,320 | INFO     | sum of square deviations: 5441962.5
[2026-04-23 00:48:50] 2026-04-22 22:47:47,320 | INFO     | sum of deviations: 128290533.5
[2026-04-23 00:48:50] 2026-04-22 22:47:47,320 | INFO     | mean x (centered): 0.0
[2026-04-23 00:48:50] 2026-04-22 22:47:47,320 | INFO     | mean y: 2915009.1153846155
[2026-04-23 00:48:50] 2026-04-22 22:47:47,320 | INFO     | intersect: 2915009.1153846155
[2026-04-23 00:48:50] 2026-04-22 22:47:47,320 | INFO     | chi2: 7.815606327453285e-05
[2026-04-23 00:48:50] 2026-04-22 22:47:47,320 | INFO     | current memory leak: 23.57 B/s (using 26 data points, chi2=0.00)
[2026-04-23 00:48:50] 2026-04-22 22:47:47,320 | INFO     | could have reported an average CPU frequency of 3542 MHz (5 samples)
[2026-04-23 00:48:50] 2026-04-22 22:47:47,321 | INFO     | ..............................
[2026-04-23 00:48:50] 2026-04-22 22:47:47,321 | INFO     | . Timing measurements:
[2026-04-23 00:48:50] 2026-04-22 22:47:47,321 | INFO     | . get job = 0 s
[2026-04-23 00:48:50] 2026-04-22 22:47:47,321 | INFO     | . initial setup = 3 s
[2026-04-23 00:48:50] 2026-04-22 22:47:47,321 | INFO     | . payload setup = 3 s
[2026-04-23 00:48:50] 2026-04-22 22:47:47,321 | INFO     | . stage-in = 0 s
[2026-04-23 00:48:50] 2026-04-22 22:47:47,321 | INFO     | . payload execution = 1968 s
[2026-04-23 00:48:50] 2026-04-22 22:47:47,321 | INFO     | . stage-out = 0 s
[2026-04-23 00:48:50] 2026-04-22 22:47:47,321 | INFO     | . log creation = 0 s
[2026-04-23 00:48:50] 2026-04-22 22:47:47,321 | INFO     | ..............................
[2026-04-23 00:48:50] 2026-04-22 22:47:47,598 | INFO     | 
[2026-04-23 00:48:50] 2026-04-22 22:47:47,598 | INFO     | job summary report
[2026-04-23 00:48:50] 2026-04-22 22:47:47,598 | INFO     | --------------------------------------------------
[2026-04-23 00:48:50] 2026-04-22 22:47:47,598 | INFO     | PanDA job id: 7105532917
[2026-04-23 00:48:50] 2026-04-22 22:47:47,598 | INFO     | task id: 49820244
[2026-04-23 00:48:50] 2026-04-22 22:47:47,598 | INFO     | errors: (none)
[2026-04-23 00:48:50] 2026-04-22 22:47:47,598 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-23 00:48:50] 2026-04-22 22:47:47,598 | INFO     | pilot state: finished 
[2026-04-23 00:48:50] 2026-04-22 22:47:47,598 | INFO     | transexitcode: 0
[2026-04-23 00:48:50] 2026-04-22 22:47:47,598 | INFO     | exeerrorcode: 0
[2026-04-23 00:48:50] 2026-04-22 22:47:47,598 | INFO     | exeerrordiag: 
[2026-04-23 00:48:50] 2026-04-22 22:47:47,598 | INFO     | exitcode: 0
[2026-04-23 00:48:50] 2026-04-22 22:47:47,598 | INFO     | exitmsg: OK
[2026-04-23 00:48:50] 2026-04-22 22:47:47,598 | INFO     | cpuconsumptiontime: 21165 s
[2026-04-23 00:48:50] 2026-04-22 22:47:47,598 | INFO     | nevents: 400
[2026-04-23 00:48:50] 2026-04-22 22:47:47,598 | INFO     | neventsw: 0
[2026-04-23 00:48:50] 2026-04-22 22:47:47,598 | INFO     | pid: 32234
[2026-04-23 00:48:50] 2026-04-22 22:47:47,598 | INFO     | pgrp: 32234
[2026-04-23 00:48:50] 2026-04-22 22:47:47,598 | INFO     | corecount: 12
[2026-04-23 00:48:50] 2026-04-22 22:47:47,599 | INFO     | event service: False
[2026-04-23 00:48:50] 2026-04-22 22:47:47,599 | INFO     | sizes: {0: 2276391, 11: 2276391, 1972: 2301379, 1973: 2310457, 1974: 2310627}
[2026-04-23 00:48:50] 2026-04-22 22:47:47,599 | INFO     | --------------------------------------------------
[2026-04-23 00:48:50] 2026-04-22 22:47:47,599 | INFO     | 
[2026-04-23 00:48:50] 2026-04-22 22:47:47,599 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot60/slots/21
[2026-04-23 00:48:50] 2026-04-22 22:47:47,614 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-23 00:48:50] 2026-04-22 22:47:47,614 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-23 00:48:50] 2026-04-22 22:47:47,614 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-23 00:48:50] 2026-04-22 22:47:47,614 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-23 00:48:50] 2026-04-22 22:47:47,614 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-23 00:48:50] 2026-04-22 22:47:47,614 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-23 00:48:50] 2026-04-22 22:47:47,614 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-23 00:48:50] 2026-04-22 22:47:47,614 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-23 00:48:50] 2026-04-22 22:47:47,614 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-23 00:48:50] 2026-04-22 22:47:47,614 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-23 00:48:50] 2026-04-22 22:47:47,614 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-23 00:48:50] 2026-04-22 22:47:47,614 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-23 00:48:50] 2026-04-22 22:47:47,614 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-23 00:48:50] 2026-04-22 22:47:47,614 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-23 00:48:50] 2026-04-22 22:47:47,614 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-23 00:48:50] 2026-04-22 22:47:47,614 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-23 00:48:50] 2026-04-22 22:47:47,614 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-23 00:48:50] 2026-04-22 22:47:47,614 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-23 00:48:50] 2026-04-22 22:47:47,614 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-23 00:48:50] 2026-04-22 22:47:47,614 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-23 00:48:50] 2026-04-22 22:47:47,614 | INFO     | job 7105532917 has completed (purged errors)
[2026-04-23 00:48:50] 2026-04-22 22:47:47,614 | INFO     | overall cleanup function is called
[2026-04-23 00:48:50] 2026-04-22 22:47:48,621 | INFO     | --- collectZombieJob: --- 10, [32234]
[2026-04-23 00:48:50] 2026-04-22 22:47:48,621 | INFO     | zombie collector waiting for pid 32234
[2026-04-23 00:48:50] 2026-04-22 22:47:48,621 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-23 00:48:50] 2026-04-22 22:47:48,621 | INFO     | collected zombie processes
[2026-04-23 00:48:50] 2026-04-22 22:47:48,621 | INFO     | will attempt to kill all subprocesses of pid=32234
[2026-04-23 00:48:50] 2026-04-22 22:47:48,778 | INFO     | process IDs to be killed: [32234] (in reverse order)
[2026-04-23 00:48:50] 2026-04-22 22:47:48,852 | WARNING  | found no corresponding commands to process id(s)
[2026-04-23 00:48:50] 2026-04-22 22:47:48,852 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-23 00:48:50] 2026-04-22 22:47:48,866 | INFO     | did not find any defunct processes belonging to 32234
[2026-04-23 00:48:50] 2026-04-22 22:47:48,873 | INFO     | did not find any defunct processes belonging to 32234
[2026-04-23 00:48:50] 2026-04-22 22:47:48,873 | INFO     | Ready for new job
[2026-04-23 00:48:50] 2026-04-22 22:47:48,874 | INFO     | **************************************
[2026-04-23 00:48:50] 2026-04-22 22:47:48,874 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-23 00:48:50] 2026-04-22 22:47:48,874 | INFO     | **************************************
[2026-04-23 00:48:50] 2026-04-22 22:47:48,874 | INFO     | 
[2026-04-23 00:48:50] 2026-04-22 22:47:48,877 | INFO     | architecture information:
[2026-04-23 00:48:50] 2026-04-22 22:47:48,877 | INFO     | executing command: cat /etc/os-release
[2026-04-23 00:48:50] 2026-04-22 22:47:48,887 | INFO     | cat /etc/os-release:
[2026-04-23 00:48:50] NAME="CentOS Linux"
[2026-04-23 00:48:50] VERSION="7 (Core)"
[2026-04-23 00:48:50] ID="centos"
[2026-04-23 00:48:50] ID_LIKE="rhel fedora"
[2026-04-23 00:48:50] VERSION_ID="7"
[2026-04-23 00:48:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-23 00:48:50] ANSI_COLOR="0;31"
[2026-04-23 00:48:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-23 00:48:50] HOME_URL="https://www.centos.org/"
[2026-04-23 00:48:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-23 00:48:50] 
[2026-04-23 00:48:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-23 00:48:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-23 00:48:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-23 00:48:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-23 00:48:50] 
[2026-04-23 00:48:50] 2026-04-22 22:47:48,887 | INFO     | **************************************
[2026-04-23 00:48:50] 2026-04-22 22:47:49,390 | INFO     | executing command: df -mP /var/lib/boinc/var/slot60/slots/21
[2026-04-23 00:48:50] 2026-04-22 22:47:49,403 | INFO     | sufficient remaining disk space (335960604672 B)
[2026-04-23 00:48:50] 2026-04-22 22:47:49,403 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-23 00:48:50] 2026-04-22 22:47:49,403 | INFO     | current server update state: UPDATING_FINAL
[2026-04-23 00:48:50] 2026-04-22 22:47:49,403 | INFO     | update_server=False
[2026-04-23 00:48:50] 2026-04-22 22:47:49,403 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-23 00:48:50] 2026-04-22 22:47:49,403 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-23 00:48:50] 2026-04-22 22:47:49,588 | INFO     | all payload control threads have been joined
[2026-04-23 00:48:50] 2026-04-22 22:47:49,791 | WARNING  | process 32234 can no longer be monitored (due to stat problems) - aborting
[2026-04-23 00:48:50] 2026-04-22 22:47:49,904 | INFO     | all data control threads have been joined
[2026-04-23 00:48:50] 2026-04-22 22:47:49,937 | INFO     | using path: /var/lib/boinc/var/slot60/slots/21/memory_monitor_summary.json (trf name=prmon)
[2026-04-23 00:48:50] 2026-04-22 22:47:50,090 | INFO     | number of running child processes to parent process 32234: 1
[2026-04-23 00:48:50] 2026-04-22 22:47:50,090 | INFO     | maximum number of monitored processes: 6
[2026-04-23 00:48:50] 2026-04-22 22:47:50,090 | INFO     | aborting job monitoring since job object (job id=7105532917) has expired
[2026-04-23 00:48:50] 2026-04-22 22:47:50,091 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-23 00:48:50] 2026-04-22 22:47:50,091 | INFO     | will abort loop
[2026-04-23 00:48:50] 2026-04-22 22:47:50,408 | INFO     | [job] retrieve thread has finished
[2026-04-23 00:48:50] 2026-04-22 22:47:50,593 | INFO     | [payload] control thread has finished
[2026-04-23 00:48:50] 2026-04-22 22:47:50,598 | INFO     | all job control threads have been joined
[2026-04-23 00:48:50] 2026-04-22 22:47:50,664 | INFO     | [payload] execute_payloads thread has finished
[2026-04-23 00:48:50] 2026-04-22 22:47:50,866 | INFO     | [payload] failed_post thread has finished
[2026-04-23 00:48:50] 2026-04-22 22:47:50,910 | INFO     | [data] control thread has finished
[2026-04-23 00:48:50] 2026-04-22 22:47:51,096 | INFO     | [job] job monitor thread has finished
[2026-04-23 00:48:50] 2026-04-22 22:47:51,352 | INFO     | [payload] validate_post thread has finished
[2026-04-23 00:48:50] 2026-04-22 22:47:51,409 | INFO     | [data] copytool_out thread has finished
[2026-04-23 00:48:50] 2026-04-22 22:47:51,548 | INFO     | [job] validate thread has finished
[2026-04-23 00:48:50] 2026-04-22 22:47:51,604 | INFO     | [job] control thread has finished
[2026-04-23 00:48:50] 2026-04-22 22:47:51,636 | INFO     | [payload] validate_pre thread has finished
[2026-04-23 00:48:50] 2026-04-22 22:47:51,657 | INFO     | [job] create_data_payload thread has finished
[2026-04-23 00:48:50] 2026-04-22 22:47:51,720 | INFO     | [data] copytool_in thread has finished
[2026-04-23 00:48:50] 2026-04-22 22:47:51,962 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-23 00:48:50] 2026-04-22 22:47:52,354 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-23 00:48:50] 2026-04-22 22:47:53,359 | INFO     | [job] queue monitor thread has finished
[2026-04-23 00:48:50] 2026-04-22 22:47:55,968 | INFO     | [data] queue_monitor thread has finished
[2026-04-23 00:48:50] 2026-04-22 22:47:59,521 | INFO     | job.realtimelogging is not enabled
[2026-04-23 00:48:50] 2026-04-22 22:48:00,526 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-23 00:48:50] 2026-04-22 22:48:20,496 | INFO     | PID=26535 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-23 00:48:50] 2026-04-22 22:48:20,496 | INFO     | found 0 job(s) in 20 queues
[2026-04-23 00:48:50] 2026-04-22 22:48:20,496 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-23 00:48:50] 2026-04-22 22:48:20,496 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-23 00:48:50] 2026-04-22 22:48:44,573 | INFO     | [monitor] cgroup control has ended
[2026-04-23 00:48:50] 2026-04-22 22:48:44,946 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22910358714176)>', '<ExcThread(monitor, started 22910120244992)>']
[2026-04-23 00:48:50] 2026-04-22 22:48:45,618 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-23 00:48:50] 2026-04-22 22:48:45,618 | INFO     | [monitor] control thread has ended
[2026-04-23 00:48:50] 2026-04-22 22:48:49,971 | INFO     | all workflow threads have been joined
[2026-04-23 00:48:50] 2026-04-22 22:48:49,971 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-23 00:48:50] 2026-04-22 22:48:49,972 | INFO     | traces error code: 0
[2026-04-23 00:48:50] 2026-04-22 22:48:49,972 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-23 00:48:50] 2026-04-22 22:48:50,031 [wrapper] ==== pilot stdout END ====
[2026-04-23 00:48:50] 2026-04-22 22:48:50,033 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-23 00:48:50] 2026-04-22 22:48:50,035 [wrapper] pilotpid: 26535
[2026-04-23 00:48:50] 2026-04-22 22:48:50,037 [wrapper] Pilot exit status: 0
[2026-04-23 00:48:50] 2026-04-22 22:48:50,044 [wrapper] pandaids: 7105532917
[2026-04-23 00:48:50] 2026-04-22 22:48:50,098 [wrapper] cleanup supervisor_pilot   59413 26536
[2026-04-23 00:48:50] 2026-04-22 22:48:50,100 [wrapper] Test setup, not cleaning
[2026-04-23 00:48:50] 2026-04-22 22:48:50,102 [wrapper] apfmon messages muted
[2026-04-23 00:48:50] 2026-04-22 22:48:50,104 [wrapper] ==== wrapper stdout END ====
[2026-04-23 00:48:50] 2026-04-22 22:48:50,105 [wrapper] ==== wrapper stderr END ====
[2026-04-23 00:48:50]  *** Error codes and diagnostics ***
[2026-04-23 00:48:50]     "exeErrorCode": 0,
[2026-04-23 00:48:50]     "pilotErrorCode": 0,
[2026-04-23 00:48:50]  *** Listing of results directory ***
[2026-04-23 00:48:50] total 2450988
[2026-04-23 00:48:50] -rw-r--r--. 1 boinc boinc     650909 Apr 16 18:02 pilot3.tar.gz
[2026-04-23 00:48:50] -rwx------. 1 boinc boinc      36322 Apr 21 13:09 runpilot2-wrapper.sh
[2026-04-23 00:48:50] -rw-r--r--. 1 boinc boinc       5094 Apr 21 19:27 queuedata.json
[2026-04-23 00:48:50] -rw-r--r--. 1 boinc boinc        100 Apr 23 00:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-23 00:48:50] -rwxr-xr-x. 1 boinc boinc       7986 Apr 23 00:14 run_atlas
[2026-04-23 00:48:50] -rw-r--r--. 1 boinc boinc        105 Apr 23 00:14 job.xml
[2026-04-23 00:48:50] -rw-r--r--. 2 boinc boinc 2229771246 Apr 23 00:14 EVNT.49820242._000052.pool.root.1
[2026-04-23 00:48:50] -rw-r--r--. 2 boinc boinc      15665 Apr 23 00:14 start_atlas.sh
[2026-04-23 00:48:50] drwxrwx--x. 2 boinc boinc       4096 Apr 23 00:14 shared
[2026-04-23 00:48:50] -rw-r--r--. 2 boinc boinc     664470 Apr 23 00:14 input.tar.gz
[2026-04-23 00:48:50] -rw-r--r--. 1 boinc boinc       6627 Apr 23 00:14 init_data.xml
[2026-04-23 00:48:50] -rw-r--r--. 1 boinc boinc          0 Apr 23 00:14 boinc_lockfile
[2026-04-23 00:48:50] -rw-r--r--. 1 boinc boinc       2551 Apr 23 00:14 pandaJob.out
[2026-04-23 00:48:50] -rw-------. 1 boinc boinc     997023 Apr 23 00:14 agis_schedconf.cvmfs.json
[2026-04-23 00:48:50] -rw-------. 1 boinc boinc    1509089 Apr 23 00:14 agis_ddmendpoints.agis.ALL.json
[2026-04-23 00:48:50] -rw-------. 1 boinc boinc        444 Apr 23 00:14 workernode_map.json
[2026-04-23 00:48:50] drwx------. 5 boinc boinc       4096 Apr 23 00:14 pilot3
[2026-04-23 00:48:50] -rw-r--r--. 1 boinc boinc        488 Apr 23 00:47 boinc_task_state.xml
[2026-04-23 00:48:50] -rw-------. 1 boinc boinc  274665110 Apr 23 00:47 HITS.49820244._015294.pool.root.1
[2026-04-23 00:48:50] -rw-------. 1 boinc boinc       1017 Apr 23 00:47 memory_monitor_summary.json
[2026-04-23 00:48:50] -rw-------. 1 boinc boinc     424960 Apr 23 00:47 log.49820244._015294.job.log.tgz.1
[2026-04-23 00:48:50] -rw-------. 1 boinc boinc       6362 Apr 23 00:47 heartbeat_new.json
[2026-04-23 00:48:50] -rw-------. 1 boinc boinc       6253 Apr 23 00:47 heartbeat.json
[2026-04-23 00:48:50] -rw-------. 1 boinc boinc         95 Apr 23 00:48 pilot_heartbeat.json
[2026-04-23 00:48:50] -rw-r--r--. 1 boinc boinc         27 Apr 23 00:48 wrapper_checkpoint.txt
[2026-04-23 00:48:50] -rw-r--r--. 1 boinc boinc       8192 Apr 23 00:48 boinc_mmap_file
[2026-04-23 00:48:50] -rw-------. 1 boinc boinc       5353 Apr 23 00:48 pilotlog.txt
[2026-04-23 00:48:50] -rw-------. 1 boinc boinc     228610 Apr 23 00:48 log.49820244._015294.job.log.1
[2026-04-23 00:48:50] -rw-------. 1 boinc boinc        357 Apr 23 00:48 output.list
[2026-04-23 00:48:50] -rw-r--r--. 1 boinc boinc        410 Apr 23 00:48 runtime_log
[2026-04-23 00:48:50] -rw-------. 1 boinc boinc     675840 Apr 23 00:48 result.tar.gz
[2026-04-23 00:48:50] -rw-r--r--. 1 boinc boinc       8845 Apr 23 00:48 runtime_log.err
[2026-04-23 00:48:50] -rw-------. 1 boinc boinc        660 Apr 23 00:48 5afa2a773d2c.diag
[2026-04-23 00:48:50] -rw-r--r--. 1 boinc boinc      21005 Apr 23 00:48 stderr.txt
[2026-04-23 00:48:50] HITS file was successfully produced:
[2026-04-23 00:48:50] -rw-------. 1 boinc boinc 274665110 Apr 23 00:47 shared/HITS.pool.root.1
[2026-04-23 00:48:50]  *** Contents of shared directory: ***
[2026-04-23 00:48:50] total 2447076
[2026-04-23 00:48:50] -rw-r--r--. 2 boinc boinc 2229771246 Apr 23 00:14 ATLAS.root_0
[2026-04-23 00:48:50] -rw-r--r--. 2 boinc boinc      15665 Apr 23 00:14 start_atlas.sh
[2026-04-23 00:48:50] -rw-r--r--. 2 boinc boinc     664470 Apr 23 00:14 input.tar.gz
[2026-04-23 00:48:50] -rw-------. 1 boinc boinc  274665110 Apr 23 00:47 HITS.pool.root.1
[2026-04-23 00:48:50] -rw-------. 1 boinc boinc     675840 Apr 23 00:48 result.tar.gz
00:48:51 (21694): run_atlas exited; CPU time 21184.927215
00:48:51 (21694): called boinc_finish(0)

</stderr_txt>
]]>

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