Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:24:29 (25044): wrapper (7.7.26015): starting
03:24:29 (25044): wrapper: running run_atlas (--nthreads 8)
[2026-04-22 03:24:29] Arguments: --nthreads 8
[2026-04-22 03:24:29] Threads: 8
[2026-04-22 03:24:29] Checking for CVMFS
[2026-04-22 03:24:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-22 03:24:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-22 03:24:29] Running cvmfs_config stat atlas.cern.ch
[2026-04-22 03:24:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-22 03:24:30] 2.11.2.0 16103 9125 96488 158710 2 111 14966938 25165824 401 130560 0 2433619 99.875 4149572 19653 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-22 03:24:30] CVMFS is ok
[2026-04-22 03:24:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-22 03:24:30] Checking for apptainer binary...
[2026-04-22 03:24:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-22 03:24:30] Running /usr/bin/apptainer --version
[2026-04-22 03:24:30] apptainer version 1.3.2-1.el7
[2026-04-22 03:24:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-22 03:24:31] cg-vwn420.simple-grid.lan
[2026-04-22 03:24:31] apptainer works
[2026-04-22 03:24:31] Set ATHENA_PROC_NUMBER=8
[2026-04-22 03:24:31] Set ATHENA_CORE_NUMBER=8
[2026-04-22 03:24:31] Starting ATLAS job with PandaID=7105340318
[2026-04-22 03:24:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-22 06:20:20]  *** The last 200 lines of the pilot log: ***
[2026-04-22 06:20:20] 2026-04-22 04:19:17,762 | INFO     | log transfer has been attempted: DONE
[2026-04-22 06:20:20] 2026-04-22 04:19:17,762 | INFO     | job 7105340318 has finished - writing final server update
[2026-04-22 06:20:20] 2026-04-22 04:19:17,763 | INFO     | total number of processed events: 400 (read)
[2026-04-22 06:20:20] 2026-04-22 04:19:17,764 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-7105340318/memory_monitor_summary.json (trf name=prmon)
[2026-04-22 06:20:20] 2026-04-22 04:19:17,764 | INFO     | extracted standard info from prmon json
[2026-04-22 06:20:20] 2026-04-22 04:19:17,764 | INFO     | extracted standard memory fields from prmon json
[2026-04-22 06:20:20] 2026-04-22 04:19:17,765 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-22 06:20:20] 2026-04-22 04:19:17,765 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-22 06:20:20] 2026-04-22 04:19:17,767 | INFO     | fitting pss+swap vs Time
[2026-04-22 06:20:20] 2026-04-22 04:19:17,767 | INFO     | sum of square deviations: 1550429070.0
[2026-04-22 06:20:20] 2026-04-22 04:19:17,768 | INFO     | sum of deviations: -15326777283.999998
[2026-04-22 06:20:20] 2026-04-22 04:19:17,768 | INFO     | mean x (centered): 0.0
[2026-04-22 06:20:20] 2026-04-22 04:19:17,768 | INFO     | mean y: 2581023.409356725
[2026-04-22 06:20:20] 2026-04-22 04:19:17,768 | INFO     | intersect: 2581023.409356725
[2026-04-22 06:20:20] 2026-04-22 04:19:17,768 | INFO     | chi2: 2.4906516685573235
[2026-04-22 06:20:20] 2026-04-22 04:19:17,769 | INFO     | sum of square deviations: 1418361477.5
[2026-04-22 06:20:20] 2026-04-22 04:19:17,769 | INFO     | sum of deviations: -3018768975.999997
[2026-04-22 06:20:20] 2026-04-22 04:19:17,769 | INFO     | mean x (centered): 0.0
[2026-04-22 06:20:20] 2026-04-22 04:19:17,769 | INFO     | mean y: 2594919.0240963856
[2026-04-22 06:20:20] 2026-04-22 04:19:17,769 | INFO     | intersect: 2594919.0240963856
[2026-04-22 06:20:20] 2026-04-22 04:19:17,770 | INFO     | chi2: 1.729108548930133
[2026-04-22 06:20:20] 2026-04-22 04:19:17,770 | INFO     | current chi2=1.729108548930133 (change=30.576058837978902 %)
[2026-04-22 06:20:20] 2026-04-22 04:19:17,770 | INFO     | sum of square deviations: 1294014960.0
[2026-04-22 06:20:20] 2026-04-22 04:19:17,771 | INFO     | sum of deviations: -2565886797.999997
[2026-04-22 06:20:20] 2026-04-22 04:19:17,771 | INFO     | mean x (centered): 0.0
[2026-04-22 06:20:20] 2026-04-22 04:19:17,771 | INFO     | mean y: 2595474.6273291926
[2026-04-22 06:20:20] 2026-04-22 04:19:17,771 | INFO     | intersect: 2595474.6273291926
[2026-04-22 06:20:20] 2026-04-22 04:19:17,771 | INFO     | chi2: 1.7296373045141076
[2026-04-22 06:20:20] 2026-04-22 04:19:17,771 | INFO     | current chi2=1.7296373045141076 (change=-0.030579663972036025 %)
[2026-04-22 06:20:20] 2026-04-22 04:19:17,771 | INFO     | right removable region: 160
[2026-04-22 06:20:20] 2026-04-22 04:19:17,771 | INFO     | sum of square deviations: 1418361477.5
[2026-04-22 06:20:20] 2026-04-22 04:19:17,772 | INFO     | sum of deviations: -42843543278.5
[2026-04-22 06:20:20] 2026-04-22 04:19:17,772 | INFO     | mean x (centered): 0.0
[2026-04-22 06:20:20] 2026-04-22 04:19:17,772 | INFO     | mean y: 2612388.6325301207
[2026-04-22 06:20:20] 2026-04-22 04:19:17,772 | INFO     | intersect: 2612388.6325301207
[2026-04-22 06:20:20] 2026-04-22 04:19:17,772 | INFO     | chi2: 0.9784963152121922
[2026-04-22 06:20:20] 2026-04-22 04:19:17,772 | INFO     | current chi2=0.9784963152121922 (change=60.71324113423805 %)
[2026-04-22 06:20:20] 2026-04-22 04:19:17,773 | INFO     | sum of square deviations: 1294014960.0
[2026-04-22 06:20:20] 2026-04-22 04:19:17,773 | INFO     | sum of deviations: -44239182622.00001
[2026-04-22 06:20:20] 2026-04-22 04:19:17,773 | INFO     | mean x (centered): 0.0
[2026-04-22 06:20:20] 2026-04-22 04:19:17,773 | INFO     | mean y: 2614025.7763975156
[2026-04-22 06:20:20] 2026-04-22 04:19:17,774 | INFO     | intersect: 2614025.7763975156
[2026-04-22 06:20:20] 2026-04-22 04:19:17,774 | INFO     | chi2: 0.9386416592741869
[2026-04-22 06:20:20] 2026-04-22 04:19:17,774 | INFO     | current chi2=0.9386416592741869 (change=4.073051202994322 %)
[2026-04-22 06:20:20] 2026-04-22 04:19:17,774 | INFO     | left removable region: 10
[2026-04-22 06:20:20] 2026-04-22 04:19:17,774 | INFO     | sum of square deviations: 1046484737.5
[2026-04-22 06:20:20] 2026-04-22 04:19:17,775 | INFO     | sum of deviations: -30316224842.5
[2026-04-22 06:20:20] 2026-04-22 04:19:17,775 | INFO     | mean x (centered): 0.0
[2026-04-22 06:20:20] 2026-04-22 04:19:17,775 | INFO     | mean y: 2631983.1133333333
[2026-04-22 06:20:20] 2026-04-22 04:19:17,775 | INFO     | intersect: 2631983.1133333333
[2026-04-22 06:20:20] 2026-04-22 04:19:17,775 | INFO     | chi2: 0.13968316136964185
[2026-04-22 06:20:20] 2026-04-22 04:19:17,775 | INFO     | current memory leak: -28.97 B/s (using 150 data points, chi2=0.14)
[2026-04-22 06:20:20] 2026-04-22 04:19:17,775 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-04-22 06:20:20] 2026-04-22 04:19:17,776 | INFO     | ..............................
[2026-04-22 06:20:20] 2026-04-22 04:19:17,776 | INFO     | . Timing measurements:
[2026-04-22 06:20:20] 2026-04-22 04:19:17,776 | INFO     | . get job = 0 s
[2026-04-22 06:20:20] 2026-04-22 04:19:17,776 | INFO     | . initial setup = 6 s
[2026-04-22 06:20:20] 2026-04-22 04:19:17,776 | INFO     | . payload setup = 12 s
[2026-04-22 06:20:20] 2026-04-22 04:19:17,776 | INFO     | . stage-in = 0 s
[2026-04-22 06:20:20] 2026-04-22 04:19:17,776 | INFO     | . payload execution = 10429 s
[2026-04-22 06:20:20] 2026-04-22 04:19:17,776 | INFO     | . stage-out = 3 s
[2026-04-22 06:20:20] 2026-04-22 04:19:17,776 | INFO     | . log creation = 1 s
[2026-04-22 06:20:20] 2026-04-22 04:19:17,776 | INFO     | ..............................
[2026-04-22 06:20:20] 2026-04-22 04:19:17,882 | INFO     | 
[2026-04-22 06:20:20] 2026-04-22 04:19:17,882 | INFO     | job summary report
[2026-04-22 06:20:20] 2026-04-22 04:19:17,882 | INFO     | --------------------------------------------------
[2026-04-22 06:20:20] 2026-04-22 04:19:17,882 | INFO     | PanDA job id: 7105340318
[2026-04-22 06:20:20] 2026-04-22 04:19:17,882 | INFO     | task id: 49820375
[2026-04-22 06:20:20] 2026-04-22 04:19:17,882 | INFO     | errors: (none)
[2026-04-22 06:20:20] 2026-04-22 04:19:17,882 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-22 06:20:20] 2026-04-22 04:19:17,882 | INFO     | pilot state: finished 
[2026-04-22 06:20:20] 2026-04-22 04:19:17,883 | INFO     | transexitcode: 0
[2026-04-22 06:20:20] 2026-04-22 04:19:17,883 | INFO     | exeerrorcode: 0
[2026-04-22 06:20:20] 2026-04-22 04:19:17,883 | INFO     | exeerrordiag: 
[2026-04-22 06:20:20] 2026-04-22 04:19:17,883 | INFO     | exitcode: 0
[2026-04-22 06:20:20] 2026-04-22 04:19:17,883 | INFO     | exitmsg: OK
[2026-04-22 06:20:20] 2026-04-22 04:19:17,883 | INFO     | cpuconsumptiontime: 77191 s
[2026-04-22 06:20:20] 2026-04-22 04:19:17,883 | INFO     | nevents: 400
[2026-04-22 06:20:20] 2026-04-22 04:19:17,883 | INFO     | neventsw: 0
[2026-04-22 06:20:20] 2026-04-22 04:19:17,883 | INFO     | pid: 1091
[2026-04-22 06:20:20] 2026-04-22 04:19:17,883 | INFO     | pgrp: 1091
[2026-04-22 06:20:20] 2026-04-22 04:19:17,883 | INFO     | corecount: 8
[2026-04-22 06:20:20] 2026-04-22 04:19:17,883 | INFO     | event service: False
[2026-04-22 06:20:20] 2026-04-22 04:19:17,883 | INFO     | sizes: {0: 2274840, 1: 2276414, 11: 2276442, 10446: 2305415, 10451: 2314413, 10454: 2314855}
[2026-04-22 06:20:20] 2026-04-22 04:19:17,883 | INFO     | --------------------------------------------------
[2026-04-22 06:20:20] 2026-04-22 04:19:17,883 | INFO     | 
[2026-04-22 06:20:20] 2026-04-22 04:19:17,883 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2026-04-22 06:20:20] 2026-04-22 04:19:18,591 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-22 06:20:20] 2026-04-22 04:19:18,591 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-22 06:20:20] 2026-04-22 04:19:18,591 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-22 06:20:20] 2026-04-22 04:19:18,591 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-22 06:20:20] 2026-04-22 04:19:18,592 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-22 06:20:20] 2026-04-22 04:19:18,592 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-22 06:20:20] 2026-04-22 04:19:18,592 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-22 06:20:20] 2026-04-22 04:19:18,592 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-22 06:20:20] 2026-04-22 04:19:18,592 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-22 06:20:20] 2026-04-22 04:19:18,592 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-22 06:20:20] 2026-04-22 04:19:18,592 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-22 06:20:20] 2026-04-22 04:19:18,592 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-22 06:20:20] 2026-04-22 04:19:18,592 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-22 06:20:20] 2026-04-22 04:19:18,592 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-22 06:20:20] 2026-04-22 04:19:18,592 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-22 06:20:20] 2026-04-22 04:19:18,593 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-22 06:20:20] 2026-04-22 04:19:18,593 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-22 06:20:20] 2026-04-22 04:19:18,593 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-22 06:20:20] 2026-04-22 04:19:18,593 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-22 06:20:20] 2026-04-22 04:19:18,593 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-22 06:20:20] 2026-04-22 04:19:18,593 | INFO     | job 7105340318 has completed (purged errors)
[2026-04-22 06:20:20] 2026-04-22 04:19:18,593 | INFO     | overall cleanup function is called
[2026-04-22 06:20:20] 2026-04-22 04:19:19,602 | INFO     | --- collectZombieJob: --- 10, [1091]
[2026-04-22 06:20:20] 2026-04-22 04:19:19,602 | INFO     | zombie collector waiting for pid 1091
[2026-04-22 06:20:20] 2026-04-22 04:19:19,602 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-22 06:20:20] 2026-04-22 04:19:19,602 | INFO     | collected zombie processes
[2026-04-22 06:20:20] 2026-04-22 04:19:19,602 | INFO     | will attempt to kill all subprocesses of pid=1091
[2026-04-22 06:20:20] 2026-04-22 04:19:19,681 | INFO     | process IDs to be killed: [1091] (in reverse order)
[2026-04-22 06:20:20] 2026-04-22 04:19:20,456 | WARNING  | found no corresponding commands to process id(s)
[2026-04-22 06:20:20] 2026-04-22 04:19:20,456 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-22 06:20:20] 2026-04-22 04:19:20,458 | INFO     | did not find any defunct processes belonging to 1091
[2026-04-22 06:20:20] 2026-04-22 04:19:20,460 | INFO     | did not find any defunct processes belonging to 1091
[2026-04-22 06:20:20] 2026-04-22 04:19:20,460 | INFO     | Ready for new job
[2026-04-22 06:20:20] 2026-04-22 04:19:20,461 | INFO     | **************************************
[2026-04-22 06:20:20] 2026-04-22 04:19:20,461 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-22 06:20:20] 2026-04-22 04:19:20,462 | INFO     | **************************************
[2026-04-22 06:20:20] 2026-04-22 04:19:20,462 | INFO     | 
[2026-04-22 06:20:20] 2026-04-22 04:19:20,462 | INFO     | pilot is running in a VM
[2026-04-22 06:20:20] 2026-04-22 04:19:20,462 | INFO     | architecture information:
[2026-04-22 06:20:20] 2026-04-22 04:19:20,467 | INFO     | executing command: cat /etc/os-release
[2026-04-22 06:20:20] 2026-04-22 04:19:20,794 | INFO     | cat /etc/os-release:
[2026-04-22 06:20:20] NAME="CentOS Linux"
[2026-04-22 06:20:20] VERSION="7 (Core)"
[2026-04-22 06:20:20] ID="centos"
[2026-04-22 06:20:20] ID_LIKE="rhel fedora"
[2026-04-22 06:20:20] VERSION_ID="7"
[2026-04-22 06:20:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-22 06:20:20] ANSI_COLOR="0;31"
[2026-04-22 06:20:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-22 06:20:20] HOME_URL="https://www.centos.org/"
[2026-04-22 06:20:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-22 06:20:20] 
[2026-04-22 06:20:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-22 06:20:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-22 06:20:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-22 06:20:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-22 06:20:20] 
[2026-04-22 06:20:20] 2026-04-22 04:19:20,794 | INFO     | **************************************
[2026-04-22 06:20:20] 2026-04-22 04:19:21,297 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2026-04-22 06:20:20] 2026-04-22 04:19:21,586 | INFO     | sufficient remaining disk space (491638489088 B)
[2026-04-22 06:20:20] 2026-04-22 04:19:21,587 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-22 06:20:20] 2026-04-22 04:19:21,587 | INFO     | current server update state: UPDATING_FINAL
[2026-04-22 06:20:20] 2026-04-22 04:19:21,587 | INFO     | update_server=False
[2026-04-22 06:20:20] 2026-04-22 04:19:21,587 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-22 06:20:20] 2026-04-22 04:19:21,641 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-22 06:20:20] 2026-04-22 04:19:21,641 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-22 06:20:20] 2026-04-22 04:19:21,641 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-22 06:20:20] 2026-04-22 04:19:21,641 | INFO     | will abort loop
[2026-04-22 06:20:20] 2026-04-22 04:19:22,017 | INFO     | all job control threads have been joined
[2026-04-22 06:20:20] 2026-04-22 04:19:22,448 | INFO     | all payload control threads have been joined
[2026-04-22 06:20:20] 2026-04-22 04:19:22,492 | INFO     | all data control threads have been joined
[2026-04-22 06:20:20] 2026-04-22 04:19:22,593 | INFO     | [job] retrieve thread has finished
[2026-04-22 06:20:20] 2026-04-22 04:19:22,647 | INFO     | [job] job monitor thread has finished
[2026-04-22 06:20:20] 2026-04-22 04:19:22,758 | INFO     | [job] validate thread has finished
[2026-04-22 06:20:20] 2026-04-22 04:19:22,769 | INFO     | [job] create_data_payload thread has finished
[2026-04-22 06:20:20] 2026-04-22 04:19:22,771 | INFO     | [data] copytool_in thread has finished
[2026-04-22 06:20:20] 2026-04-22 04:19:22,897 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-22 06:20:20] 2026-04-22 04:19:22,906 | INFO     | [payload] execute_payloads thread has finished
[2026-04-22 06:20:20] 2026-04-22 04:19:22,942 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-22 06:20:20] 2026-04-22 04:19:23,023 | INFO     | [job] control thread has finished
[2026-04-22 06:20:20] 2026-04-22 04:19:23,271 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-22 06:20:20] 2026-04-22 04:19:23,420 | INFO     | [payload] failed_post thread has finished
[2026-04-22 06:20:20] 2026-04-22 04:19:23,454 | INFO     | [payload] control thread has finished
[2026-04-22 06:20:20] 2026-04-22 04:19:23,498 | INFO     | [data] control thread has finished
[2026-04-22 06:20:20] 2026-04-22 04:19:23,711 | INFO     | [payload] validate_pre thread has finished
[2026-04-22 06:20:20] 2026-04-22 04:19:23,760 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-22 06:20:20] 2026-04-22 04:19:23,889 | INFO     | [payload] validate_post thread has finished
[2026-04-22 06:20:20] 2026-04-22 04:19:23,903 | INFO     | [job] queue monitor thread has finished
[2026-04-22 06:20:20] 2026-04-22 04:19:24,949 | INFO     | [data] copytool_out thread has finished
[2026-04-22 06:20:20] 2026-04-22 04:19:27,769 | INFO     | [data] queue_monitor thread has finished
[2026-04-22 06:20:20] 2026-04-22 04:19:50,523 | INFO     | PID=29078 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-22 06:20:20] 2026-04-22 04:19:50,523 | INFO     | .. there are 2 such processes running
[2026-04-22 06:20:20] 2026-04-22 04:19:50,523 | INFO     | found 0 job(s) in 20 queues
[2026-04-22 06:20:20] 2026-04-22 04:19:50,523 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-22 06:20:20] 2026-04-22 04:19:50,523 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-22 06:20:20] 2026-04-22 04:20:09,674 | INFO     | [monitor] cgroup control has ended
[2026-04-22 06:20:20] 2026-04-22 04:20:10,070 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140019406706496)>', '<ExcThread(monitor, started 140018702063360)>']
[2026-04-22 06:20:20] 2026-04-22 04:20:10,643 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-22 06:20:20] 2026-04-22 04:20:10,643 | INFO     | [monitor] control thread has ended
[2026-04-22 06:20:20] 2026-04-22 04:20:15,096 | INFO     | all workflow threads have been joined
[2026-04-22 06:20:20] 2026-04-22 04:20:15,096 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-22 06:20:20] 2026-04-22 04:20:15,096 | INFO     | traces error code: 0
[2026-04-22 06:20:20] 2026-04-22 04:20:15,096 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-22 06:20:20] 2026-04-22 04:20:15,456 [wrapper] ==== pilot stdout END ====
[2026-04-22 06:20:20] 2026-04-22 04:20:15,559 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-22 06:20:20] 2026-04-22 04:20:15,646 [wrapper] pilotpid: 29078
[2026-04-22 06:20:20] 2026-04-22 04:20:15,741 [wrapper] Pilot exit status: 0
[2026-04-22 06:20:20] 2026-04-22 04:20:16,247 [wrapper] pandaids: 7105340318
[2026-04-22 06:20:20] 2026-04-22 04:20:17,153 [wrapper] cleanup supervisor_pilot 23409 29079
[2026-04-22 06:20:20] 2026-04-22 04:20:17,248 [wrapper] Test setup, not cleaning
[2026-04-22 06:20:20] 2026-04-22 04:20:17,362 [wrapper] apfmon messages muted
[2026-04-22 06:20:20] 2026-04-22 04:20:17,466 [wrapper] ==== wrapper stdout END ====
[2026-04-22 06:20:20] 2026-04-22 04:20:17,580 [wrapper] ==== wrapper stderr END ====
[2026-04-22 06:20:20]  *** Error codes and diagnostics ***
[2026-04-22 06:20:20]     "exeErrorCode": 0,
[2026-04-22 06:20:20]     "pilotErrorCode": 0,
[2026-04-22 06:20:20]  *** Listing of results directory ***
[2026-04-22 06:20:20] total 2440420
[2026-04-22 06:20:20] -rwx------. 1 boinc boinc      36322 Apr 21 13:08 runpilot2-wrapper.sh
[2026-04-22 06:20:20] -rw-r--r--. 1 boinc boinc     644190 Apr 21 19:04 pilot3.tar.gz
[2026-04-22 06:20:20] -rw-r--r--. 1 boinc boinc       5094 Apr 21 19:27 queuedata.json
[2026-04-22 06:20:20] -rw-r--r--. 1 boinc boinc        100 Apr 22 03:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-22 06:20:20] -rwxr-xr-x. 1 boinc boinc       7986 Apr 22 03:24 run_atlas
[2026-04-22 06:20:20] -rw-r--r--. 1 boinc boinc        105 Apr 22 03:24 job.xml
[2026-04-22 06:20:20] -rw-r--r--. 1 boinc boinc       6306 Apr 22 03:24 init_data.xml
[2026-04-22 06:20:20] -rw-r--r--. 2 boinc boinc 2217434726 Apr 22 03:24 EVNT.49820373._000044.pool.root.1
[2026-04-22 06:20:20] -rw-r--r--. 2 boinc boinc      15665 Apr 22 03:24 start_atlas.sh
[2026-04-22 06:20:20] drwxrwx--x. 2 boinc boinc         68 Apr 22 03:24 shared
[2026-04-22 06:20:20] -rw-r--r--. 2 boinc boinc     656943 Apr 22 03:24 input.tar.gz
[2026-04-22 06:20:20] -rw-r--r--. 1 boinc boinc          0 Apr 22 03:24 boinc_lockfile
[2026-04-22 06:20:20] -rw-r--r--. 1 boinc boinc       2586 Apr 22 03:24 pandaJob.out
[2026-04-22 06:20:20] -rw-------. 1 boinc boinc     997050 Apr 22 03:24 agis_schedconf.cvmfs.json
[2026-04-22 06:20:20] -rw-------. 1 boinc boinc    1509089 Apr 22 03:24 agis_ddmendpoints.agis.ALL.json
[2026-04-22 06:20:20] -rw-------. 1 boinc boinc        415 Apr 22 03:24 workernode_map.json
[2026-04-22 06:20:20] drwx------. 5 boinc boinc       4096 Apr 22 03:24 pilot3
[2026-04-22 06:20:20] -rw-------. 1 boinc boinc  274744761 Apr 22 06:17 HITS.49820375._010774.pool.root.1
[2026-04-22 06:20:20] -rw-r--r--. 1 boinc boinc        489 Apr 22 06:18 boinc_task_state.xml
[2026-04-22 06:20:20] -rw-------. 1 boinc boinc         95 Apr 22 06:18 pilot_heartbeat.json
[2026-04-22 06:20:20] -rw-------. 1 boinc boinc       1020 Apr 22 06:19 memory_monitor_summary.json
[2026-04-22 06:20:20] -rw-------. 1 boinc boinc     396018 Apr 22 06:19 log.49820375._010774.job.log.tgz.1
[2026-04-22 06:20:20] -rw-------. 1 boinc boinc       6344 Apr 22 06:19 heartbeat_new.json
[2026-04-22 06:20:20] -rw-------. 1 boinc boinc       6235 Apr 22 06:19 heartbeat.json
[2026-04-22 06:20:20] -rw-r--r--. 1 boinc boinc       8192 Apr 22 06:19 boinc_mmap_file
[2026-04-22 06:20:20] -rw-r--r--. 1 boinc boinc         28 Apr 22 06:19 wrapper_checkpoint.txt
[2026-04-22 06:20:20] -rw-------. 1 boinc boinc       5065 Apr 22 06:20 pilotlog.txt
[2026-04-22 06:20:20] -rw-------. 1 boinc boinc     988922 Apr 22 06:20 log.49820375._010774.job.log.1
[2026-04-22 06:20:20] -rw-------. 1 boinc boinc        357 Apr 22 06:20 output.list
[2026-04-22 06:20:20] -rw-r--r--. 1 boinc boinc        410 Apr 22 06:20 runtime_log
[2026-04-22 06:20:20] -rw-------. 1 boinc boinc    1402880 Apr 22 06:20 result.tar.gz
[2026-04-22 06:20:20] -rw-r--r--. 1 boinc boinc       8438 Apr 22 06:20 runtime_log.err
[2026-04-22 06:20:20] -rw-------. 1 boinc boinc        655 Apr 22 06:20 5a966d9346c8.diag
[2026-04-22 06:20:20] -rw-r--r--. 1 boinc boinc      20601 Apr 22 06:20 stderr.txt
[2026-04-22 06:20:20] HITS file was successfully produced:
[2026-04-22 06:20:20] -rw-------. 1 boinc boinc 274744761 Apr 22 06:17 shared/HITS.pool.root.1
[2026-04-22 06:20:20]  *** Contents of shared directory: ***
[2026-04-22 06:20:20] total 2435804
[2026-04-22 06:20:20] -rw-r--r--. 2 boinc boinc 2217434726 Apr 22 03:24 ATLAS.root_0
[2026-04-22 06:20:20] -rw-r--r--. 2 boinc boinc      15665 Apr 22 03:24 start_atlas.sh
[2026-04-22 06:20:20] -rw-r--r--. 2 boinc boinc     656943 Apr 22 03:24 input.tar.gz
[2026-04-22 06:20:20] -rw-------. 1 boinc boinc  274744761 Apr 22 06:17 HITS.pool.root.1
[2026-04-22 06:20:20] -rw-------. 1 boinc boinc    1402880 Apr 22 06:20 result.tar.gz
06:20:21 (25044): run_atlas exited; CPU time 77259.725039
06:20:21 (25044): called boinc_finish(0)

</stderr_txt>
]]>

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