Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:54:30 (1332694): wrapper (7.7.26015): starting
14:54:30 (1332694): wrapper: running run_atlas (--nthreads 8)
[2026-04-21 14:54:30] Arguments: --nthreads 8
[2026-04-21 14:54:30] Threads: 8
[2026-04-21 14:54:30] Checking for CVMFS
[2026-04-21 14:54:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-21 14:54:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-21 14:54:31] Running cvmfs_config stat atlas.cern.ch
[2026-04-21 14:54:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-21 14:54:31] 2.13.3.0 9597 169924 212760 158700 0 636 33322172 40960001 26576 16776704 0 1389466150 99.727 1018120597 45473 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-21 14:54:31] CVMFS is ok
[2026-04-21 14:54:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 14:54:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 14:54:31] Further information can be found at the LHC@home message board.
[2026-04-21 14:54:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 14:54:31] Checking for apptainer binary...
[2026-04-21 14:54:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-21 14:54:31] Running /usr/bin/apptainer --version
[2026-04-21 14:54:32] apptainer version 1.4.5-2.el9
[2026-04-21 14:54:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 14:54:32] c-208-38.aglt2.org
[2026-04-21 14:54:32] apptainer works
[2026-04-21 14:54:32] Set ATHENA_PROC_NUMBER=8
[2026-04-21 14:54:32] Set ATHENA_CORE_NUMBER=8
[2026-04-21 14:54:32] Starting ATLAS job with PandaID=7105308947
[2026-04-21 14:54:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
17:45:46 (3252538): wrapper (7.7.26015): starting
17:45:46 (3252538): wrapper: running run_atlas (--nthreads 11)
[2026-04-21 17:45:46] Arguments: --nthreads 11
[2026-04-21 17:45:46] Threads: 11
[2026-04-21 17:45:46] This job has been restarted, cleaning up previous attempt
[2026-04-21 17:45:46] Checking for CVMFS
[2026-04-21 17:45:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-21 17:45:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-21 17:45:46] Running cvmfs_config stat atlas.cern.ch
[2026-04-21 17:45:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-21 17:45:46] 2.13.3.0 9597 170095 174920 158704 1 402 21487929 40960000 22821 16776704 0 1390427739 99.727 1018719445 45476 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-21 17:45:46] CVMFS is ok
[2026-04-21 17:45:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 17:45:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 17:45:46] Further information can be found at the LHC@home message board.
[2026-04-21 17:45:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 17:45:46] Checking for apptainer binary...
[2026-04-21 17:45:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-21 17:45:46] Running /usr/bin/apptainer --version
[2026-04-21 17:45:47] apptainer version 1.4.5-2.el9
[2026-04-21 17:45:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 17:45:47] c-208-38.aglt2.org
[2026-04-21 17:45:47] apptainer works
[2026-04-21 17:45:47] Set ATHENA_PROC_NUMBER=11
[2026-04-21 17:45:47] Set ATHENA_CORE_NUMBER=11
[2026-04-21 17:45:47] Starting ATLAS job with PandaID=7105308947
[2026-04-21 17:45:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-21 20:17:25]  *** The last 200 lines of the pilot log: ***
[2026-04-21 20:17:25] 2026-04-22 00:16:45,213 | INFO     | mean x (centered): 0.0
[2026-04-21 20:17:25] 2026-04-22 00:16:45,213 | INFO     | mean y: 2631315.4527027025
[2026-04-21 20:17:25] 2026-04-22 00:16:45,213 | INFO     | intersect: 2631315.4527027025
[2026-04-21 20:17:25] 2026-04-22 00:16:45,214 | INFO     | chi2: 1.874986728075554
[2026-04-21 20:17:25] 2026-04-22 00:16:45,214 | INFO     | sum of square deviations: 906709859.8881135
[2026-04-21 20:17:25] 2026-04-22 00:16:45,214 | INFO     | sum of deviations: 42837691691.13981
[2026-04-21 20:17:25] 2026-04-22 00:16:45,214 | INFO     | mean x (centered): 0.0
[2026-04-21 20:17:25] 2026-04-22 00:16:45,214 | INFO     | mean y: 2628313.965034965
[2026-04-21 20:17:25] 2026-04-22 00:16:45,214 | INFO     | intersect: 2628313.965034965
[2026-04-21 20:17:25] 2026-04-22 00:16:45,214 | INFO     | chi2: 1.8740468247364033
[2026-04-21 20:17:25] 2026-04-22 00:16:45,214 | INFO     | current chi2=1.8740468247364033 (change=0.05012853291583214 %)
[2026-04-21 20:17:25] 2026-04-22 00:16:45,214 | INFO     | right removable region: 142
[2026-04-21 20:17:25] 2026-04-22 00:16:45,215 | INFO     | sum of square deviations: 906707419.8881135
[2026-04-21 20:17:25] 2026-04-22 00:16:45,215 | INFO     | sum of deviations: 16617020215.356655
[2026-04-21 20:17:25] 2026-04-22 00:16:45,215 | INFO     | mean x (centered): 0.0
[2026-04-21 20:17:25] 2026-04-22 00:16:45,215 | INFO     | mean y: 2674405.160839161
[2026-04-21 20:17:25] 2026-04-22 00:16:45,215 | INFO     | intersect: 2674405.160839161
[2026-04-21 20:17:25] 2026-04-22 00:16:45,215 | INFO     | chi2: 0.2048424050197887
[2026-04-21 20:17:25] 2026-04-22 00:16:45,215 | INFO     | current chi2=0.2048424050197887 (change=89.07499440115852 %)
[2026-04-21 20:17:25] 2026-04-22 00:16:45,215 | INFO     | sum of square deviations: 814881222.3840612
[2026-04-21 20:17:25] 2026-04-22 00:16:45,218 | INFO     | sum of deviations: 4347971400.427536
[2026-04-21 20:17:25] 2026-04-22 00:16:45,218 | INFO     | mean x (centered): 0.0
[2026-04-21 20:17:25] 2026-04-22 00:16:45,218 | INFO     | mean y: 2694768.268115942
[2026-04-21 20:17:25] 2026-04-22 00:16:45,218 | INFO     | intersect: 2694768.268115942
[2026-04-21 20:17:25] 2026-04-22 00:16:45,218 | INFO     | chi2: 0.003934509130684109
[2026-04-21 20:17:25] 2026-04-22 00:16:45,218 | INFO     | current chi2=0.003934509130684109 (change=98.07925066574764 %)
[2026-04-21 20:17:25] 2026-04-22 00:16:45,218 | INFO     | sum of square deviations: 729473749.879699
[2026-04-21 20:17:25] 2026-04-22 00:16:45,219 | INFO     | sum of deviations: 3413524848.586466
[2026-04-21 20:17:25] 2026-04-22 00:16:45,219 | INFO     | mean x (centered): 0.0
[2026-04-21 20:17:25] 2026-04-22 00:16:45,219 | INFO     | mean y: 2696391.3533834587
[2026-04-21 20:17:25] 2026-04-22 00:16:45,219 | INFO     | intersect: 2696391.3533834587
[2026-04-21 20:17:25] 2026-04-22 00:16:45,219 | INFO     | chi2: 0.0006111467362347002
[2026-04-21 20:17:25] 2026-04-22 00:16:45,219 | INFO     | current chi2=0.0006111467362347002 (change=84.46701441182225 %)
[2026-04-21 20:17:25] 2026-04-22 00:16:45,219 | INFO     | sum of square deviations: 650252439.875
[2026-04-21 20:17:25] 2026-04-22 00:16:45,219 | INFO     | sum of deviations: 2752981961.0625
[2026-04-21 20:17:25] 2026-04-22 00:16:45,219 | INFO     | mean x (centered): 0.0
[2026-04-21 20:17:25] 2026-04-22 00:16:45,219 | INFO     | mean y: 2697655.984375
[2026-04-21 20:17:25] 2026-04-22 00:16:45,219 | INFO     | intersect: 2697655.984375
[2026-04-21 20:17:25] 2026-04-22 00:16:45,220 | INFO     | chi2: 0.0003861927256812681
[2026-04-21 20:17:25] 2026-04-22 00:16:45,220 | INFO     | current chi2=0.0003861927256812681 (change=36.80851049608525 %)
[2026-04-21 20:17:25] 2026-04-22 00:16:45,220 | INFO     | sum of square deviations: 576984729.8699183
[2026-04-21 20:17:25] 2026-04-22 00:16:45,220 | INFO     | sum of deviations: 2304343410.9593525
[2026-04-21 20:17:25] 2026-04-22 00:16:45,220 | INFO     | mean x (centered): 0.0
[2026-04-21 20:17:25] 2026-04-22 00:16:45,220 | INFO     | mean y: 2698591.2601626017
[2026-04-21 20:17:25] 2026-04-22 00:16:45,220 | INFO     | intersect: 2698591.2601626017
[2026-04-21 20:17:25] 2026-04-22 00:16:45,220 | INFO     | chi2: 0.00034286772487540325
[2026-04-21 20:17:25] 2026-04-22 00:16:45,220 | INFO     | current chi2=0.00034286772487540325 (change=11.218492199571301 %)
[2026-04-21 20:17:25] 2026-04-22 00:16:45,220 | INFO     | left removable region: 25
[2026-04-21 20:17:25] 2026-04-22 00:16:45,220 | INFO     | sum of square deviations: 496597709.8632484
[2026-04-21 20:17:25] 2026-04-22 00:16:45,221 | INFO     | sum of deviations: 1920538766.0170958
[2026-04-21 20:17:25] 2026-04-22 00:16:45,221 | INFO     | mean x (centered): 0.0
[2026-04-21 20:17:25] 2026-04-22 00:16:45,221 | INFO     | mean y: 2697728.4957264955
[2026-04-21 20:17:25] 2026-04-22 00:16:45,221 | INFO     | intersect: 2697728.4957264955
[2026-04-21 20:17:25] 2026-04-22 00:16:45,221 | INFO     | chi2: 0.0002760709975082057
[2026-04-21 20:17:25] 2026-04-22 00:16:45,221 | INFO     | current memory leak: 3.87 B/s (using 117 data points, chi2=0.00)
[2026-04-21 20:17:25] 2026-04-22 00:16:45,221 | INFO     | could have reported an average CPU frequency of 3799 MHz (8 samples)
[2026-04-21 20:17:25] 2026-04-22 00:16:45,222 | INFO     | ..............................
[2026-04-21 20:17:25] 2026-04-22 00:16:45,222 | INFO     | . Timing measurements:
[2026-04-21 20:17:25] 2026-04-22 00:16:45,222 | INFO     | . get job = 0 s
[2026-04-21 20:17:25] 2026-04-22 00:16:45,222 | INFO     | . initial setup = 1 s
[2026-04-21 20:17:25] 2026-04-22 00:16:45,222 | INFO     | . payload setup = 15 s
[2026-04-21 20:17:25] 2026-04-22 00:16:45,222 | INFO     | . stage-in = 0 s
[2026-04-21 20:17:25] 2026-04-22 00:16:45,222 | INFO     | . payload execution = 9003 s
[2026-04-21 20:17:25] 2026-04-22 00:16:45,222 | INFO     | . stage-out = 1 s
[2026-04-21 20:17:25] 2026-04-22 00:16:45,222 | INFO     | . log creation = 0 s
[2026-04-21 20:17:25] 2026-04-22 00:16:45,222 | INFO     | ..............................
[2026-04-21 20:17:25] 2026-04-22 00:16:45,280 | INFO     | 
[2026-04-21 20:17:25] 2026-04-22 00:16:45,281 | INFO     | job summary report
[2026-04-21 20:17:25] 2026-04-22 00:16:45,281 | INFO     | --------------------------------------------------
[2026-04-21 20:17:25] 2026-04-22 00:16:45,281 | INFO     | PanDA job id: 7105308947
[2026-04-21 20:17:25] 2026-04-22 00:16:45,281 | INFO     | task id: 49820375
[2026-04-21 20:17:25] 2026-04-22 00:16:45,281 | INFO     | errors: (none)
[2026-04-21 20:17:25] 2026-04-22 00:16:45,281 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-21 20:17:25] 2026-04-22 00:16:45,281 | INFO     | pilot state: finished 
[2026-04-21 20:17:25] 2026-04-22 00:16:45,281 | INFO     | transexitcode: 0
[2026-04-21 20:17:25] 2026-04-22 00:16:45,281 | INFO     | exeerrorcode: 0
[2026-04-21 20:17:25] 2026-04-22 00:16:45,281 | INFO     | exeerrordiag: 
[2026-04-21 20:17:25] 2026-04-22 00:16:45,281 | INFO     | exitcode: 0
[2026-04-21 20:17:25] 2026-04-22 00:16:45,281 | INFO     | exitmsg: OK
[2026-04-21 20:17:25] 2026-04-22 00:16:45,281 | INFO     | cpuconsumptiontime: 41125 s
[2026-04-21 20:17:25] 2026-04-22 00:16:45,281 | INFO     | nevents: 400
[2026-04-21 20:17:25] 2026-04-22 00:16:45,281 | INFO     | neventsw: 0
[2026-04-21 20:17:25] 2026-04-22 00:16:45,281 | INFO     | pid: 3299655
[2026-04-21 20:17:25] 2026-04-22 00:16:45,281 | INFO     | pgrp: 3299655
[2026-04-21 20:17:25] 2026-04-22 00:16:45,281 | INFO     | corecount: 11
[2026-04-21 20:17:25] 2026-04-22 00:16:45,281 | INFO     | event service: False
[2026-04-21 20:17:25] 2026-04-22 00:16:45,281 | INFO     | sizes: {0: 2273956, 1: 2276442, 11: 2276442, 9023: 2304789, 9026: 2313787, 9029: 2313843, 9032: 2314165}
[2026-04-21 20:17:25] 2026-04-22 00:16:45,281 | INFO     | --------------------------------------------------
[2026-04-21 20:17:25] 2026-04-22 00:16:45,281 | INFO     | 
[2026-04-21 20:17:25] 2026-04-22 00:16:45,282 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2026-04-21 20:17:25] 2026-04-22 00:16:45,302 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-21 20:17:25] 2026-04-22 00:16:45,302 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-21 20:17:25] 2026-04-22 00:16:45,302 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-21 20:17:25] 2026-04-22 00:16:45,302 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-21 20:17:25] 2026-04-22 00:16:45,302 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-21 20:17:25] 2026-04-22 00:16:45,302 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-21 20:17:25] 2026-04-22 00:16:45,303 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-21 20:17:25] 2026-04-22 00:16:45,303 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-21 20:17:25] 2026-04-22 00:16:45,303 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-21 20:17:25] 2026-04-22 00:16:45,303 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-21 20:17:25] 2026-04-22 00:16:45,303 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-21 20:17:25] 2026-04-22 00:16:45,303 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-21 20:17:25] 2026-04-22 00:16:45,303 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-21 20:17:25] 2026-04-22 00:16:45,303 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-21 20:17:25] 2026-04-22 00:16:45,303 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-21 20:17:25] 2026-04-22 00:16:45,303 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-21 20:17:25] 2026-04-22 00:16:45,303 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-21 20:17:25] 2026-04-22 00:16:45,303 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-21 20:17:25] 2026-04-22 00:16:45,303 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-21 20:17:25] 2026-04-22 00:16:45,303 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-21 20:17:25] 2026-04-22 00:16:45,303 | INFO     | job 7105308947 has completed (purged errors)
[2026-04-21 20:17:25] 2026-04-22 00:16:45,303 | INFO     | overall cleanup function is called
[2026-04-21 20:17:25] 2026-04-22 00:16:46,311 | INFO     | --- collectZombieJob: --- 10, [3299655]
[2026-04-21 20:17:25] 2026-04-22 00:16:46,311 | INFO     | zombie collector waiting for pid 3299655
[2026-04-21 20:17:25] 2026-04-22 00:16:46,311 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-21 20:17:25] 2026-04-22 00:16:46,311 | INFO     | collected zombie processes
[2026-04-21 20:17:25] 2026-04-22 00:16:46,311 | INFO     | will attempt to kill all subprocesses of pid=3299655
[2026-04-21 20:17:25] 2026-04-22 00:16:46,765 | INFO     | process IDs to be killed: [3299655] (in reverse order)
[2026-04-21 20:17:25] 2026-04-22 00:16:46,917 | WARNING  | found no corresponding commands to process id(s)
[2026-04-21 20:17:25] 2026-04-22 00:16:46,917 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-21 20:17:25] 2026-04-22 00:16:46,942 | INFO     | did not find any defunct processes belonging to 3299655
[2026-04-21 20:17:25] 2026-04-22 00:16:46,966 | INFO     | did not find any defunct processes belonging to 3299655
[2026-04-21 20:17:25] 2026-04-22 00:16:46,966 | INFO     | Ready for new job
[2026-04-21 20:17:25] 2026-04-22 00:16:46,968 | INFO     | **************************************
[2026-04-21 20:17:25] 2026-04-22 00:16:46,968 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-21 20:17:25] 2026-04-22 00:16:46,968 | INFO     | **************************************
[2026-04-21 20:17:25] 2026-04-22 00:16:46,968 | INFO     | 
[2026-04-21 20:17:25] 2026-04-22 00:16:46,973 | INFO     | architecture information:
[2026-04-21 20:17:25] 2026-04-22 00:16:46,973 | INFO     | executing command: cat /etc/os-release
[2026-04-21 20:17:25] 2026-04-22 00:16:46,988 | INFO     | cat /etc/os-release:
[2026-04-21 20:17:25] NAME="CentOS Linux"
[2026-04-21 20:17:25] VERSION="7 (Core)"
[2026-04-21 20:17:25] ID="centos"
[2026-04-21 20:17:25] ID_LIKE="rhel fedora"
[2026-04-21 20:17:25] VERSION_ID="7"
[2026-04-21 20:17:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-21 20:17:25] ANSI_COLOR="0;31"
[2026-04-21 20:17:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-21 20:17:25] HOME_URL="https://www.centos.org/"
[2026-04-21 20:17:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-21 20:17:25] 
[2026-04-21 20:17:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-21 20:17:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-21 20:17:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-21 20:17:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-21 20:17:25] 
[2026-04-21 20:17:25] 2026-04-22 00:16:46,988 | INFO     | **************************************
[2026-04-21 20:17:25] 2026-04-22 00:16:47,491 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2026-04-21 20:17:25] 2026-04-22 00:16:47,507 | INFO     | sufficient remaining disk space (165129748480 B)
[2026-04-21 20:17:25] 2026-04-22 00:16:47,507 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-21 20:17:25] 2026-04-22 00:16:47,508 | INFO     | current server update state: UPDATING_FINAL
[2026-04-21 20:17:25] 2026-04-22 00:16:47,508 | INFO     | update_server=False
[2026-04-21 20:17:25] 2026-04-22 00:16:47,508 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-21 20:17:25] 2026-04-22 00:16:47,508 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-21 20:17:25] 2026-04-22 00:16:48,378 | INFO     | all data control threads have been joined
[2026-04-21 20:17:25] 2026-04-22 00:16:48,378 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-21 20:17:25] 2026-04-22 00:16:48,380 | INFO     | aborting loop
[2026-04-21 20:17:25] 2026-04-22 00:16:48,513 | INFO     | [job] retrieve thread has finished
[2026-04-21 20:17:25] 2026-04-22 00:16:48,531 | INFO     | [payload] validate_pre thread has finished
[2026-04-21 20:17:25] 2026-04-22 00:16:48,687 | INFO     | all payload control threads have been joined
[2026-04-21 20:17:25] 2026-04-22 00:16:48,739 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-21 20:17:25] 2026-04-22 00:16:48,848 | INFO     | all job control threads have been joined
[2026-04-21 20:17:25] 2026-04-22 00:16:48,851 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-21 20:17:25] 2026-04-22 00:16:49,302 | INFO     | [payload] validate_post thread has finished
[2026-04-21 20:17:25] 2026-04-22 00:16:49,385 | INFO     | [data] control thread has finished
[2026-04-21 20:17:25] 2026-04-22 00:16:49,386 | INFO     | [job] job monitor thread has finished
[2026-04-21 20:17:25] 2026-04-22 00:16:49,412 | INFO     | [payload] failed_post thread has finished
[2026-04-21 20:17:25] 2026-04-22 00:16:49,514 | INFO     | [data] copytool_out thread has finished
[2026-04-21 20:17:25] 2026-04-22 00:16:49,544 | INFO     | [job] create_data_payload thread has finished
[2026-04-21 20:17:25] 2026-04-22 00:16:49,628 | INFO     | [data] copytool_in thread has finished
[2026-04-21 20:17:25] 2026-04-22 00:16:49,692 | INFO     | [payload] control thread has finished
[2026-04-21 20:17:25] 2026-04-22 00:16:49,780 | INFO     | [payload] execute_payloads thread has finished
[2026-04-21 20:17:25] 2026-04-22 00:16:49,853 | INFO     | [job] control thread has finished
[2026-04-21 20:17:25] 2026-04-22 00:16:50,007 | INFO     | [job] validate thread has finished
[2026-04-21 20:17:25] 2026-04-22 00:16:50,293 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-21 20:17:25] 2026-04-22 00:16:51,298 | INFO     | [job] queue monitor thread has finished
[2026-04-21 20:17:25] 2026-04-22 00:16:52,858 | INFO     | [data] queue_monitor thread has finished
[2026-04-21 20:17:25] 2026-04-22 00:17:18,208 | INFO     | [monitor] cgroup control has ended
[2026-04-21 20:17:25] 2026-04-22 00:17:18,365 | INFO     | PID=3278090 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-21 20:17:25] 2026-04-22 00:17:18,365 | INFO     | .. there are 24 such processes running
[2026-04-21 20:17:25] 2026-04-22 00:17:18,366 | INFO     | found 0 job(s) in 20 queues
[2026-04-21 20:17:25] 2026-04-22 00:17:18,366 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-21 20:17:25] 2026-04-22 00:17:18,366 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-21 20:17:25] 2026-04-22 00:17:19,606 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140450029307712)>', '<ExcThread(monitor, started 140449574541056)>']
[2026-04-21 20:17:25] 2026-04-22 00:17:20,376 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-21 20:17:25] 2026-04-22 00:17:20,377 | INFO     | [monitor] control thread has ended
[2026-04-21 20:17:25] 2026-04-22 00:17:24,632 | INFO     | all workflow threads have been joined
[2026-04-21 20:17:25] 2026-04-22 00:17:24,632 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-21 20:17:25] 2026-04-22 00:17:24,632 | INFO     | traces error code: 0
[2026-04-21 20:17:25] 2026-04-22 00:17:24,632 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-21 20:17:25] 2026-04-22 00:17:24,747 [wrapper] ==== pilot stdout END ====
[2026-04-21 20:17:25] 2026-04-22 00:17:24,750 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-21 20:17:25] 2026-04-22 00:17:24,752 [wrapper] pilotpid: 3278090
[2026-04-21 20:17:25] 2026-04-22 00:17:24,756 [wrapper] Pilot exit status: 0
[2026-04-21 20:17:25] 2026-04-22 00:17:24,771 [wrapper] pandaids: 7105308947 7105308947
[2026-04-21 20:17:25] 2026-04-22 00:17:24,885 [wrapper] cleanup supervisor_pilot  384722 3278093
[2026-04-21 20:17:25] 2026-04-22 00:17:24,888 [wrapper] Test setup, not cleaning
[2026-04-21 20:17:25] 2026-04-22 00:17:24,891 [wrapper] apfmon messages muted
[2026-04-21 20:17:25] 2026-04-22 00:17:24,894 [wrapper] ==== wrapper stdout END ====
[2026-04-21 20:17:25] 2026-04-22 00:17:24,897 [wrapper] ==== wrapper stderr END ====
[2026-04-21 20:17:25]  *** Error codes and diagnostics ***
[2026-04-21 20:17:25]     "exeErrorCode": 0,
[2026-04-21 20:17:25]     "pilotErrorCode": 0,
[2026-04-21 20:17:25]  *** Listing of results directory ***
[2026-04-21 20:17:25] total 4623484
[2026-04-21 20:17:25] drwx------. 5 boincer umatlas       4096 Apr  1 08:07 pilot3
[2026-04-21 20:17:25] -rwx------. 1 boincer umatlas      36322 Apr 21 07:07 runpilot2-wrapper.sh
[2026-04-21 20:17:25] -rw-r--r--. 1 boincer umatlas     644190 Apr 21 13:04 pilot3.tar.gz
[2026-04-21 20:17:25] -rw-r--r--. 1 boincer umatlas       5094 Apr 21 13:27 queuedata.json
[2026-04-21 20:17:25] -rw-r--r--. 1 boincer umatlas        100 Apr 21 14:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-21 20:17:25] -rwxr-xr-x. 1 boincer umatlas       7986 Apr 21 14:54 run_atlas
[2026-04-21 20:17:25] -rw-r--r--. 1 boincer umatlas        105 Apr 21 14:54 job.xml
[2026-04-21 20:17:25] -rw-r--r--. 3 boincer umatlas 2228939427 Apr 21 14:54 EVNT.49820373._000040.pool.root.1
[2026-04-21 20:17:25] -rw-r--r--. 3 boincer umatlas 2228939427 Apr 21 14:54 ATLAS.root_0
[2026-04-21 20:17:25] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 14:54 start_atlas.sh
[2026-04-21 20:17:25] drwxrwx--x. 2 boincer umatlas       4096 Apr 21 14:54 shared
[2026-04-21 20:17:25] -rw-r--r--. 2 boincer umatlas     656942 Apr 21 14:54 input.tar.gz
[2026-04-21 20:17:25] -rw-r--r--. 1 boincer umatlas          0 Apr 21 14:54 boinc_lockfile
[2026-04-21 20:17:25] -rw-r--r--. 1 boincer umatlas       2586 Apr 21 17:45 pandaJob.out
[2026-04-21 20:17:25] -rw-------. 1 boincer umatlas         57 Apr 21 17:45 setup.sh.local
[2026-04-21 20:17:25] -rw-------. 1 boincer umatlas     997058 Apr 21 17:46 agis_schedconf.cvmfs.json
[2026-04-21 20:17:25] -rw-------. 1 boincer umatlas        432 Apr 21 17:46 workernode_map.json
[2026-04-21 20:17:25] -rw-r--r--. 1 boincer umatlas       7101 Apr 21 20:12 init_data.xml
[2026-04-21 20:17:25] -rw-------. 1 boincer umatlas  269973920 Apr 21 20:16 HITS.49820375._010616.pool.root.1
[2026-04-21 20:17:25] -rw-r--r--. 1 boincer umatlas        489 Apr 21 20:16 boinc_task_state.xml
[2026-04-21 20:17:25] -rw-------. 1 boincer umatlas       1055 Apr 21 20:16 memory_monitor_summary.json
[2026-04-21 20:17:25] -rw-------. 1 boincer umatlas    1509089 Apr 21 20:16 agis_ddmendpoints.agis.ALL.json
[2026-04-21 20:17:25] -rw-------. 1 boincer umatlas     468449 Apr 21 20:16 log.49820375._010616.job.log.tgz.1
[2026-04-21 20:17:25] -rw-------. 1 boincer umatlas       6386 Apr 21 20:16 heartbeat_new.json
[2026-04-21 20:17:25] -rw-------. 1 boincer umatlas       6277 Apr 21 20:16 heartbeat.json
[2026-04-21 20:17:25] -rw-------. 1 boincer umatlas         96 Apr 21 20:17 pilot_heartbeat.json
[2026-04-21 20:17:25] -rw-r--r--. 1 boincer umatlas       8192 Apr 21 20:17 boinc_mmap_file
[2026-04-21 20:17:25] -rw-r--r--. 1 boincer umatlas         28 Apr 21 20:17 wrapper_checkpoint.txt
[2026-04-21 20:17:25] -rw-------. 1 boincer umatlas       4820 Apr 21 20:17 pilotlog.txt
[2026-04-21 20:17:25] -rw-------. 1 boincer umatlas     796640 Apr 21 20:17 log.49820375._010616.job.log.1
[2026-04-21 20:17:25] -rw-------. 1 boincer umatlas        357 Apr 21 20:17 output.list
[2026-04-21 20:17:25] -rw-r--r--. 1 boincer umatlas        410 Apr 21 20:17 runtime_log
[2026-04-21 20:17:25] -rw-------. 1 boincer umatlas    1280000 Apr 21 20:17 result.tar.gz
[2026-04-21 20:17:25] -rw-r--r--. 1 boincer umatlas       9050 Apr 21 20:17 runtime_log.err
[2026-04-21 20:17:25] -rw-------. 1 boincer umatlas        783 Apr 21 20:17 5a8ac63d083f.diag
[2026-04-21 20:17:25] -rw-r--r--. 1 boincer umatlas      23001 Apr 21 20:17 stderr.txt
[2026-04-21 20:17:25] HITS file was successfully produced:
[2026-04-21 20:17:25] -rw-------. 1 boincer umatlas 269973920 Apr 21 20:16 shared/HITS.pool.root.1
[2026-04-21 20:17:25]  *** Contents of shared directory: ***
[2026-04-21 20:17:25] total 2442268
[2026-04-21 20:17:25] -rw-r--r--. 3 boincer umatlas 2228939427 Apr 21 14:54 ATLAS.root_0
[2026-04-21 20:17:25] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 14:54 start_atlas.sh
[2026-04-21 20:17:25] -rw-r--r--. 2 boincer umatlas     656942 Apr 21 14:54 input.tar.gz
[2026-04-21 20:17:25] -rw-------. 1 boincer umatlas  269973920 Apr 21 20:16 HITS.pool.root.1
[2026-04-21 20:17:25] -rw-------. 1 boincer umatlas    1280000 Apr 21 20:17 result.tar.gz
20:17:26 (3252538): run_atlas exited; CPU time 41371.179279
20:17:26 (3252538): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN