Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:22:30 (184702): wrapper (7.7.26015): starting
14:22:30 (184702): wrapper: running run_atlas (--nthreads 8)
[2026-04-21 14:22:30] Arguments: --nthreads 8
[2026-04-21 14:22:30] Threads: 8
[2026-04-21 14:22:30] Checking for CVMFS
[2026-04-21 14:22:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-21 14:22:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-21 14:22:31] Running cvmfs_config stat atlas.cern.ch
[2026-04-21 14:22:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-21 14:22:32] 2.13.3.0 11793 240645 615536 158700 2 116 27425506 32935936 23285 16776704 0 934359768 99.584 1110869529 33617 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-21 14:22:32] CVMFS is ok
[2026-04-21 14:22:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 14:22:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 14:22:32] Further information can be found at the LHC@home message board.
[2026-04-21 14:22:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 14:22:32] Checking for apptainer binary...
[2026-04-21 14:22:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-21 14:22:32] Running /usr/bin/apptainer --version
[2026-04-21 14:22:32] apptainer version 1.4.5-2.el9
[2026-04-21 14:22:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 14:22:33] c6-2-11-2.aglt2.org
[2026-04-21 14:22:33] apptainer works
[2026-04-21 14:22:33] Set ATHENA_PROC_NUMBER=8
[2026-04-21 14:22:33] Set ATHENA_CORE_NUMBER=8
[2026-04-21 14:22:33] Starting ATLAS job with PandaID=7105336488
[2026-04-21 14:22:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-21 20:00:47]  *** The last 200 lines of the pilot log: ***
[2026-04-21 20:00:47] 2026-04-21 23:59:36,992 | INFO     | monitor loop #1259: job 0:7105336488 is in state 'finished'
[2026-04-21 20:00:47] 2026-04-21 23:59:36,992 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-21 20:00:47] 2026-04-21 23:59:37,541 | INFO     | job 7105336488 has state=finished
[2026-04-21 20:00:47] 2026-04-21 23:59:37,542 | INFO     | preparing for final server update for job 7105336488 in state='finished'
[2026-04-21 20:00:47] 2026-04-21 23:59:37,542 | INFO     | reading metadata from: /tmp/boinchome/slots/4/PanDA_Pilot-7105336488/jobReport.json
[2026-04-21 20:00:47] 2026-04-21 23:59:37,546 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/4/workernode_map.json
[2026-04-21 20:00:47] 2026-04-21 23:59:37,546 | INFO     | this job has now completed (state=finished)
[2026-04-21 20:00:47] 2026-04-21 23:59:37,546 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-21 20:00:47] 2026-04-21 23:59:37,546 | INFO     | log transfer has been attempted: DONE
[2026-04-21 20:00:47] 2026-04-21 23:59:37,547 | INFO     | job 7105336488 has finished - writing final server update
[2026-04-21 20:00:47] 2026-04-21 23:59:37,547 | INFO     | total number of processed events: 400 (read)
[2026-04-21 20:00:47] 2026-04-21 23:59:37,668 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-7105336488/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 20:00:47] 2026-04-21 23:59:37,689 | INFO     | extracted standard info from prmon json
[2026-04-21 20:00:47] 2026-04-21 23:59:37,689 | INFO     | extracted standard memory fields from prmon json
[2026-04-21 20:00:47] 2026-04-21 23:59:37,689 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-21 20:00:47] 2026-04-21 23:59:37,690 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-21 20:00:47] 2026-04-21 23:59:37,741 | INFO     | fitting pss+swap vs Time
[2026-04-21 20:00:47] 2026-04-21 23:59:37,744 | INFO     | sum of square deviations: 11042305638.7113
[2026-04-21 20:00:47] 2026-04-21 23:59:37,747 | INFO     | sum of deviations: -7841789133.009117
[2026-04-21 20:00:47] 2026-04-21 23:59:37,748 | INFO     | mean x (centered): 0.0
[2026-04-21 20:00:47] 2026-04-21 23:59:37,748 | INFO     | mean y: 2568637.4194528875
[2026-04-21 20:00:47] 2026-04-21 23:59:37,772 | INFO     | intersect: 2568637.4194528875
[2026-04-21 20:00:47] 2026-04-21 23:59:37,773 | INFO     | chi2: 3.2492396486300517
[2026-04-21 20:00:47] 2026-04-21 23:59:37,774 | INFO     | sum of square deviations: 10546492148.305557
[2026-04-21 20:00:47] 2026-04-21 23:59:37,794 | INFO     | sum of deviations: 13051821303.94441
[2026-04-21 20:00:47] 2026-04-21 23:59:37,795 | INFO     | mean x (centered): 0.0
[2026-04-21 20:00:47] 2026-04-21 23:59:37,795 | INFO     | mean y: 2574983.462962963
[2026-04-21 20:00:47] 2026-04-21 23:59:37,795 | INFO     | intersect: 2574983.462962963
[2026-04-21 20:00:47] 2026-04-21 23:59:37,795 | INFO     | chi2: 2.578848892740586
[2026-04-21 20:00:47] 2026-04-21 23:59:37,795 | INFO     | current chi2=2.578848892740586 (change=20.632234872922236 %)
[2026-04-21 20:00:47] 2026-04-21 23:59:37,796 | INFO     | right removable region: 323
[2026-04-21 20:00:47] 2026-04-21 23:59:37,796 | INFO     | sum of square deviations: 10546435418.305569
[2026-04-21 20:00:47] 2026-04-21 23:59:37,801 | INFO     | sum of deviations: -84400538537.82414
[2026-04-21 20:00:47] 2026-04-21 23:59:37,801 | INFO     | mean x (centered): 0.0
[2026-04-21 20:00:47] 2026-04-21 23:59:37,801 | INFO     | mean y: 2592087.7561728396
[2026-04-21 20:00:47] 2026-04-21 23:59:37,801 | INFO     | intersect: 2592087.7561728396
[2026-04-21 20:00:47] 2026-04-21 23:59:37,802 | INFO     | chi2: 0.9866049231574227
[2026-04-21 20:00:47] 2026-04-21 23:59:37,802 | INFO     | current chi2=0.9866049231574227 (change=69.63582161219175 %)
[2026-04-21 20:00:47] 2026-04-21 23:59:37,802 | INFO     | sum of square deviations: 10065635247.887106
[2026-04-21 20:00:47] 2026-04-21 23:59:37,839 | INFO     | sum of deviations: -90768598984.31346
[2026-04-21 20:00:47] 2026-04-21 23:59:37,840 | INFO     | mean x (centered): 0.0
[2026-04-21 20:00:47] 2026-04-21 23:59:37,840 | INFO     | mean y: 2594099.4764890284
[2026-04-21 20:00:47] 2026-04-21 23:59:37,840 | INFO     | intersect: 2594099.4764890284
[2026-04-21 20:00:47] 2026-04-21 23:59:37,840 | INFO     | chi2: 0.9523446619931335
[2026-04-21 20:00:47] 2026-04-21 23:59:37,841 | INFO     | current chi2=0.9523446619931335 (change=3.4725410709127975 %)
[2026-04-21 20:00:47] 2026-04-21 23:59:37,841 | INFO     | left removable region: 10
[2026-04-21 20:00:47] 2026-04-21 23:59:37,841 | INFO     | sum of square deviations: 9508308137.367361
[2026-04-21 20:00:47] 2026-04-21 23:59:37,856 | INFO     | sum of deviations: -69129478598.49841
[2026-04-21 20:00:47] 2026-04-21 23:59:37,856 | INFO     | mean x (centered): 0.0
[2026-04-21 20:00:47] 2026-04-21 23:59:37,856 | INFO     | mean y: 2601097.779552716
[2026-04-21 20:00:47] 2026-04-21 23:59:37,856 | INFO     | intersect: 2601097.779552716
[2026-04-21 20:00:47] 2026-04-21 23:59:37,857 | INFO     | chi2: 0.2606200571985477
[2026-04-21 20:00:47] 2026-04-21 23:59:37,857 | INFO     | current memory leak: -7.27 B/s (using 313 data points, chi2=0.26)
[2026-04-21 20:00:47] 2026-04-21 23:59:37,858 | INFO     | could have reported an average CPU frequency of 2645 MHz (15 samples)
[2026-04-21 20:00:47] 2026-04-21 23:59:37,858 | INFO     | ..............................
[2026-04-21 20:00:47] 2026-04-21 23:59:37,858 | INFO     | . Timing measurements:
[2026-04-21 20:00:47] 2026-04-21 23:59:37,858 | INFO     | . get job = 0 s
[2026-04-21 20:00:47] 2026-04-21 23:59:37,858 | INFO     | . initial setup = 35 s
[2026-04-21 20:00:47] 2026-04-21 23:59:37,858 | INFO     | . payload setup = 44 s
[2026-04-21 20:00:47] 2026-04-21 23:59:37,858 | INFO     | . stage-in = 0 s
[2026-04-21 20:00:47] 2026-04-21 23:59:37,858 | INFO     | . payload execution = 20058 s
[2026-04-21 20:00:47] 2026-04-21 23:59:37,859 | INFO     | . stage-out = 4 s
[2026-04-21 20:00:47] 2026-04-21 23:59:37,859 | INFO     | . log creation = 0 s
[2026-04-21 20:00:47] 2026-04-21 23:59:37,859 | INFO     | ..............................
[2026-04-21 20:00:47] 2026-04-21 23:59:38,137 | INFO     | 
[2026-04-21 20:00:47] 2026-04-21 23:59:38,137 | INFO     | job summary report
[2026-04-21 20:00:47] 2026-04-21 23:59:38,138 | INFO     | --------------------------------------------------
[2026-04-21 20:00:47] 2026-04-21 23:59:38,138 | INFO     | PanDA job id: 7105336488
[2026-04-21 20:00:47] 2026-04-21 23:59:38,138 | INFO     | task id: 49820244
[2026-04-21 20:00:47] 2026-04-21 23:59:38,138 | INFO     | errors: (none)
[2026-04-21 20:00:47] 2026-04-21 23:59:38,138 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-21 20:00:47] 2026-04-21 23:59:38,138 | INFO     | pilot state: finished 
[2026-04-21 20:00:47] 2026-04-21 23:59:38,138 | INFO     | transexitcode: 0
[2026-04-21 20:00:47] 2026-04-21 23:59:38,138 | INFO     | exeerrorcode: 0
[2026-04-21 20:00:47] 2026-04-21 23:59:38,138 | INFO     | exeerrordiag: 
[2026-04-21 20:00:47] 2026-04-21 23:59:38,138 | INFO     | exitcode: 0
[2026-04-21 20:00:47] 2026-04-21 23:59:38,138 | INFO     | exitmsg: OK
[2026-04-21 20:00:47] 2026-04-21 23:59:38,138 | INFO     | cpuconsumptiontime: 74092 s
[2026-04-21 20:00:47] 2026-04-21 23:59:38,138 | INFO     | nevents: 400
[2026-04-21 20:00:47] 2026-04-21 23:59:38,139 | INFO     | neventsw: 0
[2026-04-21 20:00:47] 2026-04-21 23:59:38,139 | INFO     | pid: 196776
[2026-04-21 20:00:47] 2026-04-21 23:59:38,139 | INFO     | pgrp: 196776
[2026-04-21 20:00:47] 2026-04-21 23:59:38,139 | INFO     | corecount: 8
[2026-04-21 20:00:47] 2026-04-21 23:59:38,139 | INFO     | event service: False
[2026-04-21 20:00:47] 2026-04-21 23:59:38,139 | INFO     | sizes: {0: 2274578, 1: 2274606, 2: 2274833, 3: 2276435, 14: 2276463, 20107: 2309854, 20108: 2309981, 20114: 2319035, 20116: 2319091, 20118: 2319285}
[2026-04-21 20:00:47] 2026-04-21 23:59:38,139 | INFO     | --------------------------------------------------
[2026-04-21 20:00:47] 2026-04-21 23:59:38,139 | INFO     | 
[2026-04-21 20:00:47] 2026-04-21 23:59:38,139 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-04-21 20:00:47] 2026-04-21 23:59:38,276 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-21 20:00:47] 2026-04-21 23:59:38,278 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-21 20:00:47] 2026-04-21 23:59:38,278 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-21 20:00:47] 2026-04-21 23:59:38,278 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-21 20:00:47] 2026-04-21 23:59:38,278 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-21 20:00:47] 2026-04-21 23:59:38,278 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-21 20:00:47] 2026-04-21 23:59:38,279 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-21 20:00:47] 2026-04-21 23:59:38,279 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-21 20:00:47] 2026-04-21 23:59:38,279 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-21 20:00:47] 2026-04-21 23:59:38,279 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-21 20:00:47] 2026-04-21 23:59:38,279 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-21 20:00:47] 2026-04-21 23:59:38,279 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-21 20:00:47] 2026-04-21 23:59:38,279 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-21 20:00:47] 2026-04-21 23:59:38,279 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-21 20:00:47] 2026-04-21 23:59:38,279 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-21 20:00:47] 2026-04-21 23:59:38,279 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-21 20:00:47] 2026-04-21 23:59:38,279 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-21 20:00:47] 2026-04-21 23:59:38,279 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-21 20:00:47] 2026-04-21 23:59:38,279 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-21 20:00:47] 2026-04-21 23:59:38,279 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-21 20:00:47] 2026-04-21 23:59:38,280 | INFO     | job 7105336488 has completed (purged errors)
[2026-04-21 20:00:47] 2026-04-21 23:59:38,280 | INFO     | overall cleanup function is called
[2026-04-21 20:00:47] 2026-04-21 23:59:39,293 | INFO     | --- collectZombieJob: --- 10, [196776]
[2026-04-21 20:00:47] 2026-04-21 23:59:39,293 | INFO     | zombie collector waiting for pid 196776
[2026-04-21 20:00:47] 2026-04-21 23:59:39,294 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-21 20:00:47] 2026-04-21 23:59:39,294 | INFO     | collected zombie processes
[2026-04-21 20:00:47] 2026-04-21 23:59:39,294 | INFO     | will attempt to kill all subprocesses of pid=196776
[2026-04-21 20:00:47] 2026-04-21 23:59:40,076 | INFO     | process IDs to be killed: [196776] (in reverse order)
[2026-04-21 20:00:47] 2026-04-21 23:59:40,802 | WARNING  | found no corresponding commands to process id(s)
[2026-04-21 20:00:47] 2026-04-21 23:59:40,802 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-21 20:00:47] 2026-04-21 23:59:40,907 | INFO     | did not find any defunct processes belonging to 196776
[2026-04-21 20:00:47] 2026-04-21 23:59:40,997 | INFO     | did not find any defunct processes belonging to 196776
[2026-04-21 20:00:47] 2026-04-21 23:59:40,997 | INFO     | Ready for new job
[2026-04-21 20:00:47] 2026-04-21 23:59:40,999 | INFO     | **************************************
[2026-04-21 20:00:47] 2026-04-21 23:59:41,013 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-21 20:00:47] 2026-04-21 23:59:41,013 | INFO     | **************************************
[2026-04-21 20:00:47] 2026-04-21 23:59:41,014 | INFO     | 
[2026-04-21 20:00:47] 2026-04-21 23:59:41,034 | INFO     | architecture information:
[2026-04-21 20:00:47] 2026-04-21 23:59:41,044 | INFO     | executing command: cat /etc/os-release
[2026-04-21 20:00:47] 2026-04-21 23:59:41,225 | INFO     | cat /etc/os-release:
[2026-04-21 20:00:47] NAME="CentOS Linux"
[2026-04-21 20:00:47] VERSION="7 (Core)"
[2026-04-21 20:00:47] ID="centos"
[2026-04-21 20:00:47] ID_LIKE="rhel fedora"
[2026-04-21 20:00:47] VERSION_ID="7"
[2026-04-21 20:00:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-21 20:00:47] ANSI_COLOR="0;31"
[2026-04-21 20:00:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-21 20:00:47] HOME_URL="https://www.centos.org/"
[2026-04-21 20:00:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-21 20:00:47] 
[2026-04-21 20:00:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-21 20:00:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-21 20:00:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-21 20:00:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-21 20:00:47] 
[2026-04-21 20:00:47] 2026-04-21 23:59:41,226 | INFO     | **************************************
[2026-04-21 20:00:47] 2026-04-21 23:59:41,729 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-04-21 20:00:47] 2026-04-21 23:59:41,785 | INFO     | sufficient remaining disk space (83005276160 B)
[2026-04-21 20:00:47] 2026-04-21 23:59:41,785 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-21 20:00:47] 2026-04-21 23:59:41,785 | INFO     | current server update state: UPDATING_FINAL
[2026-04-21 20:00:47] 2026-04-21 23:59:41,785 | INFO     | update_server=False
[2026-04-21 20:00:47] 2026-04-21 23:59:41,785 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-21 20:00:47] 2026-04-21 23:59:41,798 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-21 20:00:47] 2026-04-21 23:59:41,860 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-21 20:00:47] 2026-04-21 23:59:42,013 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-21 20:00:47] 2026-04-21 23:59:42,013 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-21 20:00:47] 2026-04-21 23:59:42,014 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-21 20:00:47] 2026-04-21 23:59:42,014 | INFO     | will abort loop
[2026-04-21 20:00:47] 2026-04-21 23:59:42,109 | INFO     | all payload control threads have been joined
[2026-04-21 20:00:47] 2026-04-21 23:59:42,311 | INFO     | all job control threads have been joined
[2026-04-21 20:00:47] 2026-04-21 23:59:42,425 | INFO     | all data control threads have been joined
[2026-04-21 20:00:47] 2026-04-21 23:59:42,794 | INFO     | [job] retrieve thread has finished
[2026-04-21 20:00:47] 2026-04-21 23:59:42,934 | INFO     | [job] validate thread has finished
[2026-04-21 20:00:47] 2026-04-21 23:59:42,938 | INFO     | [payload] validate_pre thread has finished
[2026-04-21 20:00:47] 2026-04-21 23:59:42,939 | INFO     | [data] copytool_in thread has finished
[2026-04-21 20:00:47] 2026-04-21 23:59:43,019 | INFO     | [job] job monitor thread has finished
[2026-04-21 20:00:47] 2026-04-21 23:59:43,089 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-21 20:00:47] 2026-04-21 23:59:43,090 | INFO     | [job] create_data_payload thread has finished
[2026-04-21 20:00:47] 2026-04-21 23:59:43,114 | INFO     | [payload] control thread has finished
[2026-04-21 20:00:47] 2026-04-21 23:59:43,158 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-21 20:00:47] 2026-04-21 23:59:43,317 | INFO     | [job] control thread has finished
[2026-04-21 20:00:47] 2026-04-21 23:59:43,431 | INFO     | [data] control thread has finished
[2026-04-21 20:00:47] 2026-04-21 23:59:43,710 | INFO     | [payload] validate_post thread has finished
[2026-04-21 20:00:47] 2026-04-21 23:59:43,805 | INFO     | [data] copytool_out thread has finished
[2026-04-21 20:00:47] 2026-04-21 23:59:43,859 | INFO     | [payload] execute_payloads thread has finished
[2026-04-21 20:00:47] 2026-04-21 23:59:44,120 | INFO     | [payload] failed_post thread has finished
[2026-04-21 20:00:47] 2026-04-21 23:59:44,164 | INFO     | [job] queue monitor thread has finished
[2026-04-21 20:00:47] 2026-04-21 23:59:45,872 | INFO     | [data] queue_monitor thread has finished
[2026-04-21 20:00:47] 2026-04-22 00:00:10,389 | INFO     | PID=190993 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-21 20:00:47] 2026-04-22 00:00:10,389 | INFO     | .. there are 22 such processes running
[2026-04-21 20:00:47] 2026-04-22 00:00:10,389 | INFO     | found 0 job(s) in 20 queues
[2026-04-21 20:00:47] 2026-04-22 00:00:10,389 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-21 20:00:47] 2026-04-22 00:00:10,390 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-21 20:00:47] 2026-04-22 00:00:40,225 | INFO     | [monitor] cgroup control has ended
[2026-04-21 20:00:47] 2026-04-22 00:00:40,592 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140022381000512)>', '<ExcThread(monitor, started 140021881358080)>']
[2026-04-21 20:00:47] 2026-04-22 00:00:40,608 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-21 20:00:47] 2026-04-22 00:00:40,608 | INFO     | [monitor] control thread has ended
[2026-04-21 20:00:47] 2026-04-22 00:00:45,618 | INFO     | all workflow threads have been joined
[2026-04-21 20:00:47] 2026-04-22 00:00:45,622 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-21 20:00:47] 2026-04-22 00:00:45,623 | INFO     | traces error code: 0
[2026-04-21 20:00:47] 2026-04-22 00:00:45,623 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-21 20:00:47] 2026-04-22 00:00:46,770 [wrapper] ==== pilot stdout END ====
[2026-04-21 20:00:47] 2026-04-22 00:00:46,785 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-21 20:00:47] 2026-04-22 00:00:46,799 [wrapper] pilotpid: 190993
[2026-04-21 20:00:47] 2026-04-22 00:00:46,826 [wrapper] Pilot exit status: 0
[2026-04-21 20:00:47] 2026-04-22 00:00:46,913 [wrapper] pandaids: 7105336488
[2026-04-21 20:00:47] 2026-04-22 00:00:47,055 [wrapper] cleanup supervisor_pilot 1097423 190994
[2026-04-21 20:00:47] 2026-04-22 00:00:47,075 [wrapper] Test setup, not cleaning
[2026-04-21 20:00:47] 2026-04-22 00:00:47,087 [wrapper] apfmon messages muted
[2026-04-21 20:00:47] 2026-04-22 00:00:47,102 [wrapper] ==== wrapper stdout END ====
[2026-04-21 20:00:47] 2026-04-22 00:00:47,124 [wrapper] ==== wrapper stderr END ====
[2026-04-21 20:00:47]  *** Error codes and diagnostics ***
[2026-04-21 20:00:47]     "exeErrorCode": 0,
[2026-04-21 20:00:47]     "pilotErrorCode": 0,
[2026-04-21 20:00:47]  *** Listing of results directory ***
[2026-04-21 20:00:47] total 2477792
[2026-04-21 20:00:47] -rwx------. 1 boincer umatlas      36322 Apr 21 07:07 runpilot2-wrapper.sh
[2026-04-21 20:00:47] -rw-r--r--. 1 boincer umatlas       5094 Apr 21 10:44 queuedata.json
[2026-04-21 20:00:47] -rw-r--r--. 1 boincer umatlas     644190 Apr 21 10:44 pilot3.tar.gz
[2026-04-21 20:00:47] -rw-r--r--. 1 boincer umatlas        100 Apr 21 14:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-21 20:00:47] -rwxr-xr-x. 1 boincer umatlas       7986 Apr 21 14:22 run_atlas
[2026-04-21 20:00:47] -rw-r--r--. 1 boincer umatlas        105 Apr 21 14:22 job.xml
[2026-04-21 20:00:47] -rw-r--r--. 2 boincer umatlas 2251800021 Apr 21 14:22 EVNT.49820242._000028.pool.root.1
[2026-04-21 20:00:47] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 14:22 start_atlas.sh
[2026-04-21 20:00:47] drwxrwx--x. 2 boincer umatlas       4096 Apr 21 14:22 shared
[2026-04-21 20:00:47] -rw-r--r--. 2 boincer umatlas     656921 Apr 21 14:22 input.tar.gz
[2026-04-21 20:00:47] -rw-r--r--. 1 boincer umatlas          0 Apr 21 14:22 boinc_lockfile
[2026-04-21 20:00:47] -rw-r--r--. 1 boincer umatlas       2551 Apr 21 14:22 pandaJob.out
[2026-04-21 20:00:47] -rw-------. 1 boincer umatlas         57 Apr 21 14:22 setup.sh.local
[2026-04-21 20:00:47] -rw-------. 1 boincer umatlas     995017 Apr 21 14:23 agis_schedconf.cvmfs.json
[2026-04-21 20:00:47] -rw-------. 1 boincer umatlas        443 Apr 21 14:23 workernode_map.json
[2026-04-21 20:00:47] drwx------. 5 boincer umatlas       4096 Apr 21 14:24 pilot3
[2026-04-21 20:00:47] -rw-------. 1 boincer umatlas  276969146 Apr 21 19:58 HITS.49820244._014201.pool.root.1
[2026-04-21 20:00:47] -rw-r--r--. 1 boincer umatlas        489 Apr 21 19:58 boinc_task_state.xml
[2026-04-21 20:00:47] -rw-r--r--. 1 boincer umatlas       6792 Apr 21 19:58 init_data.xml
[2026-04-21 20:00:47] -rw-------. 1 boincer umatlas         95 Apr 21 19:59 pilot_heartbeat.json
[2026-04-21 20:00:47] -rw-------. 1 boincer umatlas       1056 Apr 21 19:59 memory_monitor_summary.json
[2026-04-21 20:00:47] -rw-------. 1 boincer umatlas    1509089 Apr 21 19:59 agis_ddmendpoints.agis.ALL.json
[2026-04-21 20:00:47] -rw-------. 1 boincer umatlas     553176 Apr 21 19:59 log.49820244._014201.job.log.tgz.1
[2026-04-21 20:00:47] -rw-------. 1 boincer umatlas       6437 Apr 21 19:59 heartbeat_new.json
[2026-04-21 20:00:47] -rw-------. 1 boincer umatlas       6328 Apr 21 19:59 heartbeat.json
[2026-04-21 20:00:47] -rw-r--r--. 1 boincer umatlas       8192 Apr 21 20:00 boinc_mmap_file
[2026-04-21 20:00:47] -rw-r--r--. 1 boincer umatlas         28 Apr 21 20:00 wrapper_checkpoint.txt
[2026-04-21 20:00:47] -rw-------. 1 boincer umatlas       5004 Apr 21 20:00 pilotlog.txt
[2026-04-21 20:00:47] -rw-------. 1 boincer umatlas    1664863 Apr 21 20:00 log.49820244._014201.job.log.1
[2026-04-21 20:00:47] -rw-------. 1 boincer umatlas        357 Apr 21 20:00 output.list
[2026-04-21 20:00:47] -rw-r--r--. 1 boincer umatlas        410 Apr 21 20:00 runtime_log
[2026-04-21 20:00:47] -rw-------. 1 boincer umatlas    2232320 Apr 21 20:00 result.tar.gz
[2026-04-21 20:00:47] -rw-r--r--. 1 boincer umatlas       8969 Apr 21 20:00 runtime_log.err
[2026-04-21 20:00:47] -rw-------. 1 boincer umatlas        661 Apr 21 20:00 5a71f69d5a6c.diag
[2026-04-21 20:00:47] -rw-r--r--. 1 boincer umatlas      21277 Apr 21 20:00 stderr.txt
[2026-04-21 20:00:47] HITS file was successfully produced:
[2026-04-21 20:00:47] -rw-------. 1 boincer umatlas 276969146 Apr 21 19:58 shared/HITS.pool.root.1
[2026-04-21 20:00:47]  *** Contents of shared directory: ***
[2026-04-21 20:00:47] total 2472352
[2026-04-21 20:00:47] -rw-r--r--. 2 boincer umatlas 2251800021 Apr 21 14:22 ATLAS.root_0
[2026-04-21 20:00:47] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 14:22 start_atlas.sh
[2026-04-21 20:00:47] -rw-r--r--. 2 boincer umatlas     656921 Apr 21 14:22 input.tar.gz
[2026-04-21 20:00:47] -rw-------. 1 boincer umatlas  276969146 Apr 21 19:58 HITS.pool.root.1
[2026-04-21 20:00:47] -rw-------. 1 boincer umatlas    2232320 Apr 21 20:00 result.tar.gz
20:00:48 (184702): run_atlas exited; CPU time 74995.009276
20:00:48 (184702): called boinc_finish(0)

</stderr_txt>
]]>

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