Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:30:12 (21058): wrapper (7.7.26015): starting
20:30:12 (21058): wrapper: running run_atlas (--nthreads 8)
[2026-04-21 20:30:12] Arguments: --nthreads 8
[2026-04-21 20:30:12] Threads: 8
[2026-04-21 20:30:12] Checking for CVMFS
[2026-04-21 20:30:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-21 20:30:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-21 20:30:16] Running cvmfs_config stat atlas.cern.ch
[2026-04-21 20:30:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-21 20:30:18] 2.11.2.0 12087 8741 98312 158700 0 63 20039306 25165824 541 130560 0 2350551 99.785 4327104 13550 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-21 20:30:18] CVMFS is ok
[2026-04-21 20:30:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 20:30:18] Checking for apptainer binary...
[2026-04-21 20:30:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-21 20:30:18] Running /usr/bin/apptainer --version
[2026-04-21 20:30:18] apptainer version 1.3.2-1.el7
[2026-04-21 20:30:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 20:31:17] cg-vwn369.simple-grid.lan
[2026-04-21 20:31:17] apptainer works
[2026-04-21 20:31:17] Set ATHENA_PROC_NUMBER=8
[2026-04-21 20:31:17] Set ATHENA_CORE_NUMBER=8
[2026-04-21 20:31:17] Starting ATLAS job with PandaID=7105308573
[2026-04-21 20:31:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-22 02:05:10]  *** The last 200 lines of the pilot log: ***
[2026-04-22 02:05:10] 2026-04-22 00:04:18,104 | INFO     | job 7105308573 has finished - writing final server update
[2026-04-22 02:05:10] 2026-04-22 00:04:18,104 | INFO     | total number of processed events: 400 (read)
[2026-04-22 02:05:10] 2026-04-22 00:04:18,106 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-7105308573/memory_monitor_summary.json (trf name=prmon)
[2026-04-22 02:05:10] 2026-04-22 00:04:18,106 | INFO     | extracted standard info from prmon json
[2026-04-22 02:05:10] 2026-04-22 00:04:18,106 | INFO     | extracted standard memory fields from prmon json
[2026-04-22 02:05:10] 2026-04-22 00:04:18,107 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-22 02:05:10] 2026-04-22 00:04:18,107 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-22 02:05:10] 2026-04-22 00:04:18,112 | INFO     | fitting pss+swap vs Time
[2026-04-22 02:05:10] 2026-04-22 00:04:18,113 | INFO     | sum of square deviations: 9508390372.0
[2026-04-22 02:05:10] 2026-04-22 00:04:18,116 | INFO     | sum of deviations: 146264065465.00012
[2026-04-22 02:05:10] 2026-04-22 00:04:18,116 | INFO     | mean x (centered): 0.0
[2026-04-22 02:05:10] 2026-04-22 00:04:18,117 | INFO     | mean y: 2503823.932907348
[2026-04-22 02:05:10] 2026-04-22 00:04:18,117 | INFO     | intersect: 2503823.932907348
[2026-04-22 02:05:10] 2026-04-22 00:04:18,117 | INFO     | chi2: 7.2964113377989825
[2026-04-22 02:05:10] 2026-04-22 00:04:18,118 | INFO     | sum of square deviations: 9059954057.0
[2026-04-22 02:05:10] 2026-04-22 00:04:18,121 | INFO     | sum of deviations: 164795461950.00003
[2026-04-22 02:05:10] 2026-04-22 00:04:18,121 | INFO     | mean x (centered): 0.0
[2026-04-22 02:05:10] 2026-04-22 00:04:18,121 | INFO     | mean y: 2510031.9675324676
[2026-04-22 02:05:10] 2026-04-22 00:04:18,121 | INFO     | intersect: 2510031.9675324676
[2026-04-22 02:05:10] 2026-04-22 00:04:18,122 | INFO     | chi2: 6.57278182195297
[2026-04-22 02:05:10] 2026-04-22 00:04:18,122 | INFO     | current chi2=6.57278182195297 (change=9.917608565970749 %)
[2026-04-22 02:05:10] 2026-04-22 00:04:18,122 | INFO     | right removable region: 307
[2026-04-22 02:05:10] 2026-04-22 00:04:18,122 | INFO     | sum of square deviations: 9059954057.0
[2026-04-22 02:05:10] 2026-04-22 00:04:18,125 | INFO     | sum of deviations: 32958342181.499992
[2026-04-22 02:05:10] 2026-04-22 00:04:18,126 | INFO     | mean x (centered): 0.0
[2026-04-22 02:05:10] 2026-04-22 00:04:18,126 | INFO     | mean y: 2542339.587662338
[2026-04-22 02:05:10] 2026-04-22 00:04:18,126 | INFO     | intersect: 2542339.587662338
[2026-04-22 02:05:10] 2026-04-22 00:04:18,126 | INFO     | chi2: 2.396535513471238
[2026-04-22 02:05:10] 2026-04-22 00:04:18,126 | INFO     | current chi2=2.396535513471238 (change=67.15459967208797 %)
[2026-04-22 02:05:10] 2026-04-22 00:04:18,127 | INFO     | sum of square deviations: 8625843592.0
[2026-04-22 02:05:10] 2026-04-22 00:04:18,130 | INFO     | sum of deviations: -24830480111.0
[2026-04-22 02:05:10] 2026-04-22 00:04:18,130 | INFO     | mean x (centered): 0.0
[2026-04-22 02:05:10] 2026-04-22 00:04:18,130 | INFO     | mean y: 2562552.9801980196
[2026-04-22 02:05:10] 2026-04-22 00:04:18,130 | INFO     | intersect: 2562552.9801980196
[2026-04-22 02:05:10] 2026-04-22 00:04:18,131 | INFO     | chi2: 0.9095857521799464
[2026-04-22 02:05:10] 2026-04-22 00:04:18,131 | INFO     | current chi2=0.9095857521799464 (change=62.04580541089224 %)
[2026-04-22 02:05:10] 2026-04-22 00:04:18,131 | INFO     | sum of square deviations: 8205826414.5
[2026-04-22 02:05:10] 2026-04-22 00:04:18,134 | INFO     | sum of deviations: -24012318952.99999
[2026-04-22 02:05:10] 2026-04-22 00:04:18,134 | INFO     | mean x (centered): 0.0
[2026-04-22 02:05:10] 2026-04-22 00:04:18,134 | INFO     | mean y: 2562231.6577181206
[2026-04-22 02:05:10] 2026-04-22 00:04:18,134 | INFO     | intersect: 2562231.6577181206
[2026-04-22 02:05:10] 2026-04-22 00:04:18,135 | INFO     | chi2: 0.8888835717021126
[2026-04-22 02:05:10] 2026-04-22 00:04:18,135 | INFO     | current chi2=0.8888835717021126 (change=2.276000962879881 %)
[2026-04-22 02:05:10] 2026-04-22 00:04:18,135 | INFO     | left removable region: 15
[2026-04-22 02:05:10] 2026-04-22 00:04:18,136 | INFO     | sum of square deviations: 7720081493.0
[2026-04-22 02:05:10] 2026-04-22 00:04:18,138 | INFO     | sum of deviations: -3760720698.999959
[2026-04-22 02:05:10] 2026-04-22 00:04:18,138 | INFO     | mean x (centered): 0.0
[2026-04-22 02:05:10] 2026-04-22 00:04:18,139 | INFO     | mean y: 2569731.479452055
[2026-04-22 02:05:10] 2026-04-22 00:04:18,139 | INFO     | intersect: 2569731.479452055
[2026-04-22 02:05:10] 2026-04-22 00:04:18,139 | INFO     | chi2: 0.10177061362591037
[2026-04-22 02:05:10] 2026-04-22 00:04:18,139 | INFO     | current memory leak: -0.49 B/s (using 292 data points, chi2=0.10)
[2026-04-22 02:05:10] 2026-04-22 00:04:18,140 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-04-22 02:05:10] 2026-04-22 00:04:18,140 | INFO     | ..............................
[2026-04-22 02:05:10] 2026-04-22 00:04:18,140 | INFO     | . Timing measurements:
[2026-04-22 02:05:10] 2026-04-22 00:04:18,140 | INFO     | . get job = 0 s
[2026-04-22 02:05:10] 2026-04-22 00:04:18,140 | INFO     | . initial setup = 139 s
[2026-04-22 02:05:10] 2026-04-22 00:04:18,140 | INFO     | . payload setup = 158 s
[2026-04-22 02:05:10] 2026-04-22 00:04:18,141 | INFO     | . stage-in = 0 s
[2026-04-22 02:05:10] 2026-04-22 00:04:18,141 | INFO     | . payload execution = 19187 s
[2026-04-22 02:05:10] 2026-04-22 00:04:18,141 | INFO     | . stage-out = 1 s
[2026-04-22 02:05:10] 2026-04-22 00:04:18,141 | INFO     | . log creation = 0 s
[2026-04-22 02:05:10] 2026-04-22 00:04:18,141 | INFO     | ..............................
[2026-04-22 02:05:10] 2026-04-22 00:04:18,430 | INFO     | 
[2026-04-22 02:05:10] 2026-04-22 00:04:18,430 | INFO     | job summary report
[2026-04-22 02:05:10] 2026-04-22 00:04:18,430 | INFO     | --------------------------------------------------
[2026-04-22 02:05:10] 2026-04-22 00:04:18,430 | INFO     | PanDA job id: 7105308573
[2026-04-22 02:05:10] 2026-04-22 00:04:18,430 | INFO     | task id: 49820244
[2026-04-22 02:05:10] 2026-04-22 00:04:18,430 | INFO     | errors: (none)
[2026-04-22 02:05:10] 2026-04-22 00:04:18,431 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-22 02:05:10] 2026-04-22 00:04:18,431 | INFO     | pilot state: finished 
[2026-04-22 02:05:10] 2026-04-22 00:04:18,431 | INFO     | transexitcode: 0
[2026-04-22 02:05:10] 2026-04-22 00:04:18,431 | INFO     | exeerrorcode: 0
[2026-04-22 02:05:10] 2026-04-22 00:04:18,431 | INFO     | exeerrordiag: 
[2026-04-22 02:05:10] 2026-04-22 00:04:18,431 | INFO     | exitcode: 0
[2026-04-22 02:05:10] 2026-04-22 00:04:18,431 | INFO     | exitmsg: OK
[2026-04-22 02:05:10] 2026-04-22 00:04:18,431 | INFO     | cpuconsumptiontime: 86154 s
[2026-04-22 02:05:10] 2026-04-22 00:04:18,431 | INFO     | nevents: 400
[2026-04-22 02:05:10] 2026-04-22 00:04:18,431 | INFO     | neventsw: 0
[2026-04-22 02:05:10] 2026-04-22 00:04:18,432 | INFO     | pid: 29600
[2026-04-22 02:05:10] 2026-04-22 00:04:18,432 | INFO     | pgrp: 29600
[2026-04-22 02:05:10] 2026-04-22 00:04:18,432 | INFO     | corecount: 8
[2026-04-22 02:05:10] 2026-04-22 00:04:18,432 | INFO     | event service: False
[2026-04-22 02:05:10] 2026-04-22 00:04:18,432 | INFO     | sizes: {0: 2274520, 1: 2274977, 2: 2276405, 12: 2276433, 19349: 2309450, 19352: 2318448, 19355: 2318854}
[2026-04-22 02:05:10] 2026-04-22 00:04:18,432 | INFO     | --------------------------------------------------
[2026-04-22 02:05:10] 2026-04-22 00:04:18,432 | INFO     | 
[2026-04-22 02:05:10] 2026-04-22 00:04:18,432 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-04-22 02:05:10] 2026-04-22 00:04:18,454 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-22 02:05:10] 2026-04-22 00:04:18,455 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-22 02:05:10] 2026-04-22 00:04:18,455 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-22 02:05:10] 2026-04-22 00:04:18,455 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-22 02:05:10] 2026-04-22 00:04:18,455 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-22 02:05:10] 2026-04-22 00:04:18,455 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-22 02:05:10] 2026-04-22 00:04:18,455 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-22 02:05:10] 2026-04-22 00:04:18,456 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-22 02:05:10] 2026-04-22 00:04:18,456 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-22 02:05:10] 2026-04-22 00:04:18,456 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-22 02:05:10] 2026-04-22 00:04:18,456 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-22 02:05:10] 2026-04-22 00:04:18,456 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-22 02:05:10] 2026-04-22 00:04:18,456 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-22 02:05:10] 2026-04-22 00:04:18,456 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-22 02:05:10] 2026-04-22 00:04:18,456 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-22 02:05:10] 2026-04-22 00:04:18,456 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-22 02:05:10] 2026-04-22 00:04:18,457 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-22 02:05:10] 2026-04-22 00:04:18,457 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-22 02:05:10] 2026-04-22 00:04:18,457 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-22 02:05:10] 2026-04-22 00:04:18,457 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-22 02:05:10] 2026-04-22 00:04:18,457 | INFO     | job 7105308573 has completed (purged errors)
[2026-04-22 02:05:10] 2026-04-22 00:04:18,457 | INFO     | overall cleanup function is called
[2026-04-22 02:05:10] 2026-04-22 00:04:19,465 | INFO     | --- collectZombieJob: --- 10, [29600]
[2026-04-22 02:05:10] 2026-04-22 00:04:19,466 | INFO     | zombie collector waiting for pid 29600
[2026-04-22 02:05:10] 2026-04-22 00:04:19,466 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-22 02:05:10] 2026-04-22 00:04:19,466 | INFO     | collected zombie processes
[2026-04-22 02:05:10] 2026-04-22 00:04:19,466 | INFO     | will attempt to kill all subprocesses of pid=29600
[2026-04-22 02:05:10] 2026-04-22 00:04:19,522 | INFO     | process IDs to be killed: [29600] (in reverse order)
[2026-04-22 02:05:10] 2026-04-22 00:04:19,566 | WARNING  | found no corresponding commands to process id(s)
[2026-04-22 02:05:10] 2026-04-22 00:04:19,566 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-22 02:05:10] 2026-04-22 00:04:19,568 | INFO     | did not find any defunct processes belonging to 29600
[2026-04-22 02:05:10] 2026-04-22 00:04:19,569 | INFO     | did not find any defunct processes belonging to 29600
[2026-04-22 02:05:10] 2026-04-22 00:04:19,570 | INFO     | Ready for new job
[2026-04-22 02:05:10] 2026-04-22 00:04:19,572 | INFO     | **************************************
[2026-04-22 02:05:10] 2026-04-22 00:04:19,572 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-22 02:05:10] 2026-04-22 00:04:19,572 | INFO     | **************************************
[2026-04-22 02:05:10] 2026-04-22 00:04:19,572 | INFO     | 
[2026-04-22 02:05:10] 2026-04-22 00:04:19,572 | INFO     | pilot is running in a VM
[2026-04-22 02:05:10] 2026-04-22 00:04:19,573 | INFO     | architecture information:
[2026-04-22 02:05:10] 2026-04-22 00:04:19,573 | INFO     | executing command: cat /etc/os-release
[2026-04-22 02:05:10] 2026-04-22 00:04:19,588 | INFO     | cat /etc/os-release:
[2026-04-22 02:05:10] NAME="CentOS Linux"
[2026-04-22 02:05:10] VERSION="7 (Core)"
[2026-04-22 02:05:10] ID="centos"
[2026-04-22 02:05:10] ID_LIKE="rhel fedora"
[2026-04-22 02:05:10] VERSION_ID="7"
[2026-04-22 02:05:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-22 02:05:10] ANSI_COLOR="0;31"
[2026-04-22 02:05:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-22 02:05:10] HOME_URL="https://www.centos.org/"
[2026-04-22 02:05:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-22 02:05:10] 
[2026-04-22 02:05:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-22 02:05:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-22 02:05:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-22 02:05:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-22 02:05:10] 
[2026-04-22 02:05:10] 2026-04-22 00:04:19,588 | INFO     | **************************************
[2026-04-22 02:05:10] 2026-04-22 00:04:20,091 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-04-22 02:05:10] 2026-04-22 00:04:20,110 | INFO     | sufficient remaining disk space (489300164608 B)
[2026-04-22 02:05:10] 2026-04-22 00:04:20,110 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-22 02:05:10] 2026-04-22 00:04:20,110 | INFO     | current server update state: UPDATING_FINAL
[2026-04-22 02:05:10] 2026-04-22 00:04:20,110 | INFO     | update_server=False
[2026-04-22 02:05:10] 2026-04-22 00:04:20,110 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-22 02:05:10] 2026-04-22 00:04:20,111 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-22 02:05:10] 2026-04-22 00:04:20,111 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-22 02:05:10] 2026-04-22 00:04:20,154 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-22 02:05:10] 2026-04-22 00:04:20,481 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-22 02:05:10] 2026-04-22 00:04:20,481 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-22 02:05:10] 2026-04-22 00:04:20,481 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-22 02:05:10] 2026-04-22 00:04:20,481 | INFO     | will abort loop
[2026-04-22 02:05:10] 2026-04-22 00:04:20,732 | INFO     | all data control threads have been joined
[2026-04-22 02:05:10] 2026-04-22 00:04:21,081 | INFO     | all payload control threads have been joined
[2026-04-22 02:05:10] 2026-04-22 00:04:21,116 | INFO     | [job] retrieve thread has finished
[2026-04-22 02:05:10] 2026-04-22 00:04:21,118 | INFO     | [job] queue monitor thread has finished
[2026-04-22 02:05:10] 2026-04-22 00:04:21,164 | INFO     | [data] copytool_in thread has finished
[2026-04-22 02:05:10] 2026-04-22 00:04:21,183 | INFO     | [payload] validate_post thread has finished
[2026-04-22 02:05:10] 2026-04-22 00:04:21,486 | INFO     | [job] job monitor thread has finished
[2026-04-22 02:05:10] 2026-04-22 00:04:21,622 | INFO     | all job control threads have been joined
[2026-04-22 02:05:10] 2026-04-22 00:04:21,738 | INFO     | [data] control thread has finished
[2026-04-22 02:05:10] 2026-04-22 00:04:21,821 | INFO     | [job] validate thread has finished
[2026-04-22 02:05:10] 2026-04-22 00:04:21,955 | INFO     | [payload] validate_pre thread has finished
[2026-04-22 02:05:10] 2026-04-22 00:04:22,091 | INFO     | [payload] control thread has finished
[2026-04-22 02:05:10] 2026-04-22 00:04:22,095 | INFO     | [payload] execute_payloads thread has finished
[2026-04-22 02:05:10] 2026-04-22 00:04:22,133 | INFO     | [job] create_data_payload thread has finished
[2026-04-22 02:05:10] 2026-04-22 00:04:22,159 | INFO     | [data] copytool_out thread has finished
[2026-04-22 02:05:10] 2026-04-22 00:04:22,165 | INFO     | [payload] failed_post thread has finished
[2026-04-22 02:05:10] 2026-04-22 00:04:22,627 | INFO     | [job] control thread has finished
[2026-04-22 02:05:10] 2026-04-22 00:04:24,117 | INFO     | [data] queue_monitor thread has finished
[2026-04-22 02:05:10] 2026-04-22 00:04:30,194 | INFO     | job.realtimelogging is not enabled
[2026-04-22 02:05:10] 2026-04-22 00:04:31,200 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-22 02:05:10] 2026-04-22 00:04:49,632 | INFO     | PID=25133 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-22 02:05:10] 2026-04-22 00:04:49,633 | INFO     | .. there are 2 such processes running
[2026-04-22 02:05:10] 2026-04-22 00:04:49,633 | INFO     | found 0 job(s) in 20 queues
[2026-04-22 02:05:10] 2026-04-22 00:04:49,633 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-22 02:05:10] 2026-04-22 00:04:49,633 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-22 02:05:10] 2026-04-22 00:05:02,885 | INFO     | [monitor] cgroup control has ended
[2026-04-22 02:05:10] 2026-04-22 00:05:04,819 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140674069260096)>', '<ExcThread(monitor, started 140673189668608)>']
[2026-04-22 02:05:10] 2026-04-22 00:05:05,714 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-22 02:05:10] 2026-04-22 00:05:05,715 | INFO     | [monitor] control thread has ended
[2026-04-22 02:05:10] 2026-04-22 00:05:09,844 | INFO     | all workflow threads have been joined
[2026-04-22 02:05:10] 2026-04-22 00:05:09,844 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-22 02:05:10] 2026-04-22 00:05:09,845 | INFO     | traces error code: 0
[2026-04-22 02:05:10] 2026-04-22 00:05:09,845 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-22 02:05:10] 2026-04-22 00:05:09,964 [wrapper] ==== pilot stdout END ====
[2026-04-22 02:05:10] 2026-04-22 00:05:09,967 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-22 02:05:10] 2026-04-22 00:05:09,971 [wrapper] pilotpid: 25133
[2026-04-22 02:05:10] 2026-04-22 00:05:09,974 [wrapper] Pilot exit status: 0
[2026-04-22 02:05:10] 2026-04-22 00:05:09,986 [wrapper] pandaids: 7105308573
[2026-04-22 02:05:10] 2026-04-22 00:05:10,015 [wrapper] cleanup supervisor_pilot  5101 25134
[2026-04-22 02:05:10] 2026-04-22 00:05:10,019 [wrapper] Test setup, not cleaning
[2026-04-22 02:05:10] 2026-04-22 00:05:10,025 [wrapper] apfmon messages muted
[2026-04-22 02:05:10] 2026-04-22 00:05:10,028 [wrapper] ==== wrapper stdout END ====
[2026-04-22 02:05:10] 2026-04-22 00:05:10,031 [wrapper] ==== wrapper stderr END ====
[2026-04-22 02:05:10]  *** Error codes and diagnostics ***
[2026-04-22 02:05:10]     "exeErrorCode": 0,
[2026-04-22 02:05:10]     "pilotErrorCode": 0,
[2026-04-22 02:05:10]  *** Listing of results directory ***
[2026-04-22 02:05:10] total 2451452
[2026-04-22 02:05:10] -rwx------. 1 boinc boinc      36322 Apr 21 13:07 runpilot2-wrapper.sh
[2026-04-22 02:05:10] -rw-r--r--. 1 boinc boinc     644190 Apr 21 14:32 pilot3.tar.gz
[2026-04-22 02:05:10] -rw-r--r--. 1 boinc boinc       5094 Apr 21 15:04 queuedata.json
[2026-04-22 02:05:10] -rw-r--r--. 1 boinc boinc        100 Apr 21 20:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-22 02:05:10] -rwxr-xr-x. 1 boinc boinc       7986 Apr 21 20:29 run_atlas
[2026-04-22 02:05:10] -rw-r--r--. 1 boinc boinc        105 Apr 21 20:29 job.xml
[2026-04-22 02:05:10] -rw-r--r--. 1 boinc boinc       6305 Apr 21 20:30 init_data.xml
[2026-04-22 02:05:10] -rw-r--r--. 2 boinc boinc 2230728725 Apr 21 20:30 EVNT.49820242._000038.pool.root.1
[2026-04-22 02:05:10] -rw-r--r--. 2 boinc boinc      15665 Apr 21 20:30 start_atlas.sh
[2026-04-22 02:05:10] drwxrwx--x. 2 boinc boinc         68 Apr 21 20:30 shared
[2026-04-22 02:05:10] -rw-r--r--. 2 boinc boinc     656917 Apr 21 20:30 input.tar.gz
[2026-04-22 02:05:10] -rw-r--r--. 1 boinc boinc          0 Apr 21 20:30 boinc_lockfile
[2026-04-22 02:05:10] -rw-r--r--. 1 boinc boinc       2550 Apr 21 20:31 pandaJob.out
[2026-04-22 02:05:10] -rw-------. 1 boinc boinc        415 Apr 21 20:41 workernode_map.json
[2026-04-22 02:05:10] -rw-------. 1 boinc boinc     995017 Apr 21 20:41 agis_schedconf.cvmfs.json
[2026-04-22 02:05:10] drwx------. 5 boinc boinc       4096 Apr 21 20:41 pilot3
[2026-04-22 02:05:10] -rw-------. 1 boinc boinc  271095109 Apr 22 02:03 HITS.49820244._013856.pool.root.1
[2026-04-22 02:05:10] -rw-r--r--. 1 boinc boinc        490 Apr 22 02:03 boinc_task_state.xml
[2026-04-22 02:05:10] -rw-------. 1 boinc boinc       1011 Apr 22 02:04 memory_monitor_summary.json
[2026-04-22 02:05:10] -rw-------. 1 boinc boinc    1509089 Apr 22 02:04 agis_ddmendpoints.agis.ALL.json
[2026-04-22 02:05:10] -rw-------. 1 boinc boinc     428834 Apr 22 02:04 log.49820244._013856.job.log.tgz.1
[2026-04-22 02:05:10] -rw-------. 1 boinc boinc         95 Apr 22 02:04 pilot_heartbeat.json
[2026-04-22 02:05:10] -rw-------. 1 boinc boinc       6335 Apr 22 02:04 heartbeat_new.json
[2026-04-22 02:05:10] -rw-------. 1 boinc boinc       6226 Apr 22 02:04 heartbeat.json
[2026-04-22 02:05:10] -rw-r--r--. 1 boinc boinc       8192 Apr 22 02:04 boinc_mmap_file
[2026-04-22 02:05:10] -rw-r--r--. 1 boinc boinc         28 Apr 22 02:04 wrapper_checkpoint.txt
[2026-04-22 02:05:10] -rw-------. 1 boinc boinc       5137 Apr 22 02:05 pilotlog.txt
[2026-04-22 02:05:10] -rw-------. 1 boinc boinc    1781374 Apr 22 02:05 log.49820244._013856.job.log.1
[2026-04-22 02:05:10] -rw-------. 1 boinc boinc        357 Apr 22 02:05 output.list
[2026-04-22 02:05:10] -rw-r--r--. 1 boinc boinc        410 Apr 22 02:05 runtime_log
[2026-04-22 02:05:10] -rw-------. 1 boinc boinc    2232320 Apr 22 02:05 result.tar.gz
[2026-04-22 02:05:10] -rw-r--r--. 1 boinc boinc       8438 Apr 22 02:05 runtime_log.err
[2026-04-22 02:05:10] -rw-------. 1 boinc boinc        656 Apr 22 02:05 5a64c04f76ae.diag
[2026-04-22 02:05:10] -rw-r--r--. 1 boinc boinc      20610 Apr 22 02:05 stderr.txt
[2026-04-22 02:05:10] HITS file was successfully produced:
[2026-04-22 02:05:10] -rw-------. 1 boinc boinc 271095109 Apr 22 02:03 shared/HITS.pool.root.1
[2026-04-22 02:05:10]  *** Contents of shared directory: ***
[2026-04-22 02:05:10] total 2446032
[2026-04-22 02:05:10] -rw-r--r--. 2 boinc boinc 2230728725 Apr 21 20:30 ATLAS.root_0
[2026-04-22 02:05:10] -rw-r--r--. 2 boinc boinc      15665 Apr 21 20:30 start_atlas.sh
[2026-04-22 02:05:10] -rw-r--r--. 2 boinc boinc     656917 Apr 21 20:30 input.tar.gz
[2026-04-22 02:05:10] -rw-------. 1 boinc boinc  271095109 Apr 22 02:03 HITS.pool.root.1
[2026-04-22 02:05:10] -rw-------. 1 boinc boinc    2232320 Apr 22 02:05 result.tar.gz
02:05:12 (21058): run_atlas exited; CPU time 86346.224034
02:05:12 (21058): called boinc_finish(0)

</stderr_txt>
]]>

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