Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:46:08 (3369573): wrapper (7.7.26015): starting
16:46:08 (3369573): wrapper: running run_atlas (--nthreads 4)
[2026-04-22 16:46:08] Arguments: --nthreads 4
[2026-04-22 16:46:08] Threads: 4
[2026-04-22 16:46:08] Checking for CVMFS
[2026-04-22 16:46:08] No cvmfs_config command found, will try listing directly
[2026-04-22 16:46:08] CVMFS is ok
[2026-04-22 16:46:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-22 16:46:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-22 16:46:08] Further information can be found at the LHC@home message board.
[2026-04-22 16:46:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-22 16:46:08] Checking for apptainer binary...
[2026-04-22 16:46:08] which: no apptainer in ((null))
[2026-04-22 16:46:08] apptainer is not installed, using version from CVMFS
[2026-04-22 16:46:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-22 16:46:08] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-04-22 16:46:08] apptainer works
[2026-04-22 16:46:08] Set ATHENA_PROC_NUMBER=4
[2026-04-22 16:46:08] Set ATHENA_CORE_NUMBER=4
[2026-04-22 16:46:08] Starting ATLAS job with PandaID=7105309070
[2026-04-22 16:46:08] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-22 19:32:40]  *** The last 200 lines of the pilot log: ***
[2026-04-22 19:32:40] 2026-04-22 17:31:54,407 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-22 19:32:40] 2026-04-22 17:31:54,407 | INFO     | log transfer has been attempted: DONE
[2026-04-22 19:32:40] 2026-04-22 17:31:54,407 | INFO     | job 7105309070 has finished - writing final server update
[2026-04-22 19:32:40] 2026-04-22 17:31:54,408 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_8988/.job.ad'
[2026-04-22 19:32:40] 2026-04-22 17:31:54,408 | INFO     | total number of processed events: 400 (read)
[2026-04-22 19:32:40] 2026-04-22 17:31:54,426 | INFO     | using path: /var/lib/boinc/var/slot64/slots/0/PanDA_Pilot-7105309070/memory_monitor_summary.json (trf name=prmon)
[2026-04-22 19:32:40] 2026-04-22 17:31:54,426 | INFO     | extracted standard info from prmon json
[2026-04-22 19:32:40] 2026-04-22 17:31:54,426 | INFO     | extracted standard memory fields from prmon json
[2026-04-22 19:32:40] 2026-04-22 17:31:54,426 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-22 19:32:40] 2026-04-22 17:31:54,426 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-22 19:32:40] 2026-04-22 17:31:54,428 | INFO     | fitting pss+swap vs Time
[2026-04-22 19:32:40] 2026-04-22 17:31:54,428 | INFO     | sum of square deviations: 1342841922.0
[2026-04-22 19:32:40] 2026-04-22 17:31:54,429 | INFO     | sum of deviations: 3280575913.0
[2026-04-22 19:32:40] 2026-04-22 17:31:54,429 | INFO     | mean x (centered): 0.0
[2026-04-22 19:32:40] 2026-04-22 17:31:54,429 | INFO     | mean y: 2354586.625766871
[2026-04-22 19:32:40] 2026-04-22 17:31:54,429 | INFO     | intersect: 2354586.625766871
[2026-04-22 19:32:40] 2026-04-22 17:31:54,429 | INFO     | chi2: 1.7487355873938735
[2026-04-22 19:32:40] 2026-04-22 17:31:54,429 | INFO     | sum of square deviations: 1223016419.5
[2026-04-22 19:32:40] 2026-04-22 17:31:54,430 | INFO     | sum of deviations: 12419584414.5
[2026-04-22 19:32:40] 2026-04-22 17:31:54,430 | INFO     | mean x (centered): 0.0
[2026-04-22 19:32:40] 2026-04-22 17:31:54,430 | INFO     | mean y: 2365919.094936709
[2026-04-22 19:32:40] 2026-04-22 17:31:54,430 | INFO     | intersect: 2365919.094936709
[2026-04-22 19:32:40] 2026-04-22 17:31:54,430 | INFO     | chi2: 1.090414691782476
[2026-04-22 19:32:40] 2026-04-22 17:31:54,430 | INFO     | current chi2=1.090414691782476 (change=37.645536601247294 %)
[2026-04-22 19:32:40] 2026-04-22 17:31:54,430 | INFO     | sum of square deviations: 1110539892.0
[2026-04-22 19:32:40] 2026-04-22 17:31:54,431 | INFO     | sum of deviations: 11969771909.000004
[2026-04-22 19:32:40] 2026-04-22 17:31:54,431 | INFO     | mean x (centered): 0.0
[2026-04-22 19:32:40] 2026-04-22 17:31:54,431 | INFO     | mean y: 2365309.0588235296
[2026-04-22 19:32:40] 2026-04-22 17:31:54,431 | INFO     | intersect: 2365309.0588235296
[2026-04-22 19:32:40] 2026-04-22 17:31:54,431 | INFO     | chi2: 1.0913169996526724
[2026-04-22 19:32:40] 2026-04-22 17:31:54,431 | INFO     | current chi2=1.0913169996526724 (change=-0.08274905657419418 %)
[2026-04-22 19:32:40] 2026-04-22 17:31:54,431 | INFO     | right removable region: 152
[2026-04-22 19:32:40] 2026-04-22 17:31:54,431 | INFO     | sum of square deviations: 1223016419.5
[2026-04-22 19:32:40] 2026-04-22 17:31:54,432 | INFO     | sum of deviations: -12906739656.0
[2026-04-22 19:32:40] 2026-04-22 17:31:54,432 | INFO     | mean x (centered): 0.0
[2026-04-22 19:32:40] 2026-04-22 17:31:54,432 | INFO     | mean y: 2374797.164556962
[2026-04-22 19:32:40] 2026-04-22 17:31:54,432 | INFO     | intersect: 2374797.164556962
[2026-04-22 19:32:40] 2026-04-22 17:31:54,432 | INFO     | chi2: 0.6846930895074682
[2026-04-22 19:32:40] 2026-04-22 17:31:54,432 | INFO     | current chi2=0.6846930895074682 (change=60.846391275889744 %)
[2026-04-22 19:32:40] 2026-04-22 17:31:54,432 | INFO     | sum of square deviations: 1110539892.0
[2026-04-22 19:32:40] 2026-04-22 17:31:54,433 | INFO     | sum of deviations: -12196768585.999998
[2026-04-22 19:32:40] 2026-04-22 17:31:54,433 | INFO     | mean x (centered): 0.0
[2026-04-22 19:32:40] 2026-04-22 17:31:54,433 | INFO     | mean y: 2373822.901960784
[2026-04-22 19:32:40] 2026-04-22 17:31:54,433 | INFO     | intersect: 2373822.901960784
[2026-04-22 19:32:40] 2026-04-22 17:31:54,433 | INFO     | chi2: 0.6846994297629178
[2026-04-22 19:32:40] 2026-04-22 17:31:54,433 | INFO     | current chi2=0.6846994297629178 (change=-0.0009259996262127922 %)
[2026-04-22 19:32:40] 2026-04-22 17:31:54,433 | INFO     | left removable region: 10
[2026-04-22 19:32:40] 2026-04-22 17:31:54,433 | INFO     | sum of square deviations: 887813855.5
[2026-04-22 19:32:40] 2026-04-22 17:31:54,433 | INFO     | sum of deviations: -3101405645.4999995
[2026-04-22 19:32:40] 2026-04-22 17:31:54,434 | INFO     | mean x (centered): 0.0
[2026-04-22 19:32:40] 2026-04-22 17:31:54,434 | INFO     | mean y: 2386654.6690140846
[2026-04-22 19:32:40] 2026-04-22 17:31:54,434 | INFO     | intersect: 2386654.6690140846
[2026-04-22 19:32:40] 2026-04-22 17:31:54,434 | INFO     | chi2: 0.009191835383217726
[2026-04-22 19:32:40] 2026-04-22 17:31:54,434 | INFO     | current memory leak: -3.49 B/s (using 142 data points, chi2=0.01)
[2026-04-22 19:32:40] 2026-04-22 17:31:54,434 | INFO     | could have reported an average CPU frequency of 2917 MHz (9 samples)
[2026-04-22 19:32:40] 2026-04-22 17:31:54,434 | INFO     | ..............................
[2026-04-22 19:32:40] 2026-04-22 17:31:54,434 | INFO     | . Timing measurements:
[2026-04-22 19:32:40] 2026-04-22 17:31:54,434 | INFO     | . get job = 0 s
[2026-04-22 19:32:40] 2026-04-22 17:31:54,434 | INFO     | . initial setup = 5 s
[2026-04-22 19:32:40] 2026-04-22 17:31:54,434 | INFO     | . payload setup = 9 s
[2026-04-22 19:32:40] 2026-04-22 17:31:54,434 | INFO     | . stage-in = 0 s
[2026-04-22 19:32:40] 2026-04-22 17:31:54,434 | INFO     | . payload execution = 9904 s
[2026-04-22 19:32:40] 2026-04-22 17:31:54,435 | INFO     | . stage-out = 0 s
[2026-04-22 19:32:40] 2026-04-22 17:31:54,435 | INFO     | . log creation = 0 s
[2026-04-22 19:32:40] 2026-04-22 17:31:54,435 | INFO     | ..............................
[2026-04-22 19:32:40] 2026-04-22 17:31:54,486 | INFO     | 
[2026-04-22 19:32:40] 2026-04-22 17:31:54,486 | INFO     | job summary report
[2026-04-22 19:32:40] 2026-04-22 17:31:54,486 | INFO     | --------------------------------------------------
[2026-04-22 19:32:40] 2026-04-22 17:31:54,486 | INFO     | PanDA job id: 7105309070
[2026-04-22 19:32:40] 2026-04-22 17:31:54,486 | INFO     | task id: 49820244
[2026-04-22 19:32:40] 2026-04-22 17:31:54,486 | INFO     | errors: (none)
[2026-04-22 19:32:40] 2026-04-22 17:31:54,486 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-22 19:32:40] 2026-04-22 17:31:54,487 | INFO     | pilot state: finished 
[2026-04-22 19:32:40] 2026-04-22 17:31:54,487 | INFO     | transexitcode: 0
[2026-04-22 19:32:40] 2026-04-22 17:31:54,487 | INFO     | exeerrorcode: 0
[2026-04-22 19:32:40] 2026-04-22 17:31:54,487 | INFO     | exeerrordiag: 
[2026-04-22 19:32:40] 2026-04-22 17:31:54,487 | INFO     | exitcode: 0
[2026-04-22 19:32:40] 2026-04-22 17:31:54,487 | INFO     | exitmsg: OK
[2026-04-22 19:32:40] 2026-04-22 17:31:54,487 | INFO     | cpuconsumptiontime: 38218 s
[2026-04-22 19:32:40] 2026-04-22 17:31:54,487 | INFO     | nevents: 400
[2026-04-22 19:32:40] 2026-04-22 17:31:54,487 | INFO     | neventsw: 0
[2026-04-22 19:32:40] 2026-04-22 17:31:54,487 | INFO     | pid: 3392980
[2026-04-22 19:32:40] 2026-04-22 17:31:54,487 | INFO     | pgrp: 3392980
[2026-04-22 19:32:40] 2026-04-22 17:31:54,487 | INFO     | corecount: 4
[2026-04-22 19:32:40] 2026-04-22 17:31:54,487 | INFO     | event service: False
[2026-04-22 19:32:40] 2026-04-22 17:31:54,487 | INFO     | sizes: {0: 2276388, 11: 2276388, 9916: 2304885, 9917: 2313960, 9920: 2314218}
[2026-04-22 19:32:40] 2026-04-22 17:31:54,487 | INFO     | --------------------------------------------------
[2026-04-22 19:32:40] 2026-04-22 17:31:54,487 | INFO     | 
[2026-04-22 19:32:40] 2026-04-22 17:31:54,488 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot64/slots/0
[2026-04-22 19:32:40] 2026-04-22 17:31:54,511 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-22 19:32:40] 2026-04-22 17:31:54,511 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-22 19:32:40] 2026-04-22 17:31:54,512 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-22 19:32:40] 2026-04-22 17:31:54,512 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-22 19:32:40] 2026-04-22 17:31:54,512 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-22 19:32:40] 2026-04-22 17:31:54,512 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-22 19:32:40] 2026-04-22 17:31:54,512 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-22 19:32:40] 2026-04-22 17:31:54,512 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-22 19:32:40] 2026-04-22 17:31:54,512 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-22 19:32:40] 2026-04-22 17:31:54,512 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-22 19:32:40] 2026-04-22 17:31:54,512 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-22 19:32:40] 2026-04-22 17:31:54,512 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-22 19:32:40] 2026-04-22 17:31:54,512 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-22 19:32:40] 2026-04-22 17:31:54,512 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-22 19:32:40] 2026-04-22 17:31:54,513 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-22 19:32:40] 2026-04-22 17:31:54,513 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-22 19:32:40] 2026-04-22 17:31:54,513 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-22 19:32:40] 2026-04-22 17:31:54,513 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-22 19:32:40] 2026-04-22 17:31:54,513 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-22 19:32:40] 2026-04-22 17:31:54,513 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-22 19:32:40] 2026-04-22 17:31:54,513 | INFO     | job 7105309070 has completed (purged errors)
[2026-04-22 19:32:40] 2026-04-22 17:31:54,513 | INFO     | overall cleanup function is called
[2026-04-22 19:32:40] 2026-04-22 17:31:55,522 | INFO     | --- collectZombieJob: --- 10, [3392980]
[2026-04-22 19:32:40] 2026-04-22 17:31:55,523 | INFO     | zombie collector waiting for pid 3392980
[2026-04-22 19:32:40] 2026-04-22 17:31:55,523 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-22 19:32:40] 2026-04-22 17:31:55,523 | INFO     | collected zombie processes
[2026-04-22 19:32:40] 2026-04-22 17:31:55,523 | INFO     | will attempt to kill all subprocesses of pid=3392980
[2026-04-22 19:32:40] 2026-04-22 17:31:55,869 | INFO     | process IDs to be killed: [3392980] (in reverse order)
[2026-04-22 19:32:40] 2026-04-22 17:31:56,005 | WARNING  | found no corresponding commands to process id(s)
[2026-04-22 19:32:40] 2026-04-22 17:31:56,007 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-22 19:32:40] 2026-04-22 17:31:56,023 | INFO     | did not find any defunct processes belonging to 3392980
[2026-04-22 19:32:40] 2026-04-22 17:31:56,034 | INFO     | did not find any defunct processes belonging to 3392980
[2026-04-22 19:32:40] 2026-04-22 17:31:56,035 | INFO     | Ready for new job
[2026-04-22 19:32:40] 2026-04-22 17:31:56,036 | INFO     | **************************************
[2026-04-22 19:32:40] 2026-04-22 17:31:56,036 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-22 19:32:40] 2026-04-22 17:31:56,036 | INFO     | **************************************
[2026-04-22 19:32:40] 2026-04-22 17:31:56,036 | INFO     | 
[2026-04-22 19:32:40] 2026-04-22 17:31:56,041 | INFO     | architecture information:
[2026-04-22 19:32:40] 2026-04-22 17:31:56,041 | INFO     | executing command: cat /etc/os-release
[2026-04-22 19:32:40] 2026-04-22 17:31:56,054 | INFO     | cat /etc/os-release:
[2026-04-22 19:32:40] NAME="CentOS Linux"
[2026-04-22 19:32:40] VERSION="7 (Core)"
[2026-04-22 19:32:40] ID="centos"
[2026-04-22 19:32:40] ID_LIKE="rhel fedora"
[2026-04-22 19:32:40] VERSION_ID="7"
[2026-04-22 19:32:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-22 19:32:40] ANSI_COLOR="0;31"
[2026-04-22 19:32:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-22 19:32:40] HOME_URL="https://www.centos.org/"
[2026-04-22 19:32:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-22 19:32:40] 
[2026-04-22 19:32:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-22 19:32:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-22 19:32:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-22 19:32:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-22 19:32:40] 
[2026-04-22 19:32:40] 2026-04-22 17:31:56,054 | INFO     | **************************************
[2026-04-22 19:32:40] 2026-04-22 17:31:56,557 | INFO     | executing command: df -mP /var/lib/boinc/var/slot64/slots/0
[2026-04-22 19:32:40] 2026-04-22 17:31:56,572 | INFO     | sufficient remaining disk space (285553459200 B)
[2026-04-22 19:32:40] 2026-04-22 17:31:56,572 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-22 19:32:40] 2026-04-22 17:31:56,573 | INFO     | current server update state: UPDATING_FINAL
[2026-04-22 19:32:40] 2026-04-22 17:31:56,573 | INFO     | update_server=False
[2026-04-22 19:32:40] 2026-04-22 17:31:56,573 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-22 19:32:40] 2026-04-22 17:31:56,573 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-22 19:32:40] 2026-04-22 17:31:56,604 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-22 19:32:40] 2026-04-22 17:31:56,604 | INFO     | aborting loop
[2026-04-22 19:32:40] 2026-04-22 17:31:56,739 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-22 19:32:40] 2026-04-22 17:31:57,482 | INFO     | all job control threads have been joined
[2026-04-22 19:32:40] 2026-04-22 17:31:57,548 | INFO     | all data control threads have been joined
[2026-04-22 19:32:40] 2026-04-22 17:31:57,578 | INFO     | [job] retrieve thread has finished
[2026-04-22 19:32:40] 2026-04-22 17:31:57,610 | INFO     | [job] job monitor thread has finished
[2026-04-22 19:32:40] 2026-04-22 17:31:57,636 | INFO     | all payload control threads have been joined
[2026-04-22 19:32:40] 2026-04-22 17:31:57,826 | INFO     | [job] validate thread has finished
[2026-04-22 19:32:40] 2026-04-22 17:31:58,027 | INFO     | [payload] validate_post thread has finished
[2026-04-22 19:32:40] 2026-04-22 17:31:58,123 | INFO     | [job] create_data_payload thread has finished
[2026-04-22 19:32:40] 2026-04-22 17:31:58,372 | INFO     | [data] copytool_in thread has finished
[2026-04-22 19:32:40] 2026-04-22 17:31:58,453 | INFO     | [payload] failed_post thread has finished
[2026-04-22 19:32:40] 2026-04-22 17:31:58,488 | INFO     | [job] control thread has finished
[2026-04-22 19:32:40] 2026-04-22 17:31:58,555 | INFO     | [data] control thread has finished
[2026-04-22 19:32:40] 2026-04-22 17:31:58,568 | INFO     | [payload] validate_pre thread has finished
[2026-04-22 19:32:40] 2026-04-22 17:31:58,642 | INFO     | [payload] control thread has finished
[2026-04-22 19:32:40] 2026-04-22 17:31:58,745 | INFO     | [data] copytool_out thread has finished
[2026-04-22 19:32:40] 2026-04-22 17:31:59,021 | INFO     | [payload] execute_payloads thread has finished
[2026-04-22 19:32:40] 2026-04-22 17:31:59,497 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-22 19:32:40] 2026-04-22 17:32:00,502 | INFO     | [job] queue monitor thread has finished
[2026-04-22 19:32:40] 2026-04-22 17:32:00,578 | INFO     | [data] queue_monitor thread has finished
[2026-04-22 19:32:40] 2026-04-22 17:32:07,073 | INFO     | job.realtimelogging is not enabled
[2026-04-22 19:32:40] 2026-04-22 17:32:08,079 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-22 19:32:40] 2026-04-22 17:32:27,676 | INFO     | PID=3373700 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-22 19:32:40] 2026-04-22 17:32:27,678 | INFO     | .. there are 4 such processes running
[2026-04-22 19:32:40] 2026-04-22 17:32:27,678 | INFO     | found 0 job(s) in 20 queues
[2026-04-22 19:32:40] 2026-04-22 17:32:27,678 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-22 19:32:40] 2026-04-22 17:32:27,678 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-22 19:32:40] 2026-04-22 17:32:34,851 | INFO     | [monitor] cgroup control has ended
[2026-04-22 19:32:40] 2026-04-22 17:32:35,300 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22669616744256)>', '<ExcThread(monitor, started 22669379778304)>']
[2026-04-22 19:32:40] 2026-04-22 17:32:35,718 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-22 19:32:40] 2026-04-22 17:32:35,719 | INFO     | [monitor] control thread has ended
[2026-04-22 19:32:40] 2026-04-22 17:32:40,325 | INFO     | all workflow threads have been joined
[2026-04-22 19:32:40] 2026-04-22 17:32:40,326 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-22 19:32:40] 2026-04-22 17:32:40,326 | INFO     | traces error code: 0
[2026-04-22 19:32:40] 2026-04-22 17:32:40,326 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-22 19:32:40] 2026-04-22 17:32:40,409 [wrapper] ==== pilot stdout END ====
[2026-04-22 19:32:40] 2026-04-22 17:32:40,412 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-22 19:32:40] 2026-04-22 17:32:40,414 [wrapper] pilotpid: 3373700
[2026-04-22 19:32:40] 2026-04-22 17:32:40,416 [wrapper] Pilot exit status: 0
[2026-04-22 19:32:40] 2026-04-22 17:32:40,424 [wrapper] pandaids: 7105309070
[2026-04-22 19:32:40] 2026-04-22 17:32:40,525 [wrapper] cleanup supervisor_pilot 3562172 3373701
[2026-04-22 19:32:40] 2026-04-22 17:32:40,528 [wrapper] Test setup, not cleaning
[2026-04-22 19:32:40] 2026-04-22 17:32:40,530 [wrapper] apfmon messages muted
[2026-04-22 19:32:40] 2026-04-22 17:32:40,533 [wrapper] ==== wrapper stdout END ====
[2026-04-22 19:32:40] 2026-04-22 17:32:40,535 [wrapper] ==== wrapper stderr END ====
[2026-04-22 19:32:40]  *** Error codes and diagnostics ***
[2026-04-22 19:32:40]     "exeErrorCode": 0,
[2026-04-22 19:32:40]     "pilotErrorCode": 0,
[2026-04-22 19:32:40]  *** Listing of results directory ***
[2026-04-22 19:32:40] total 2451872
[2026-04-22 19:32:40] -rwx------. 1 boinc boinc      36322 Apr 21 13:07 runpilot2-wrapper.sh
[2026-04-22 19:32:40] -rw-r--r--. 1 boinc boinc     644190 Apr 21 14:32 pilot3.tar.gz
[2026-04-22 19:32:40] -rw-r--r--. 1 boinc boinc       5094 Apr 21 15:04 queuedata.json
[2026-04-22 19:32:40] -rw-r--r--. 1 boinc boinc        100 Apr 22 16:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-22 19:32:40] -rwxr-xr-x. 1 boinc boinc       7986 Apr 22 16:46 run_atlas
[2026-04-22 19:32:40] -rw-r--r--. 1 boinc boinc        105 Apr 22 16:46 job.xml
[2026-04-22 19:32:40] -rw-r--r--. 2 boinc boinc 2230728725 Apr 22 16:46 EVNT.49820242._000038.pool.root.1
[2026-04-22 19:32:40] -rw-r--r--. 1 boinc boinc       6538 Apr 22 16:46 init_data.xml
[2026-04-22 19:32:40] -rw-r--r--. 2 boinc boinc      15665 Apr 22 16:46 start_atlas.sh
[2026-04-22 19:32:40] drwxrwx--x. 2 boinc boinc       4096 Apr 22 16:46 shared
[2026-04-22 19:32:40] -rw-r--r--. 2 boinc boinc     656916 Apr 22 16:46 input.tar.gz
[2026-04-22 19:32:40] -rw-r--r--. 1 boinc boinc          0 Apr 22 16:46 boinc_lockfile
[2026-04-22 19:32:40] -rw-r--r--. 1 boinc boinc       2550 Apr 22 16:46 pandaJob.out
[2026-04-22 19:32:40] -rw-------. 1 boinc boinc     997131 Apr 22 16:46 agis_schedconf.cvmfs.json
[2026-04-22 19:32:40] -rw-------. 1 boinc boinc    1509089 Apr 22 16:46 agis_ddmendpoints.agis.ALL.json
[2026-04-22 19:32:40] -rw-------. 1 boinc boinc        442 Apr 22 16:46 workernode_map.json
[2026-04-22 19:32:40] drwx------. 5 boinc boinc       4096 Apr 22 16:46 pilot3
[2026-04-22 19:32:40] -rw-r--r--. 1 boinc boinc        488 Apr 22 19:31 boinc_task_state.xml
[2026-04-22 19:32:40] -rw-------. 1 boinc boinc  273484865 Apr 22 19:31 HITS.49820244._013892.pool.root.1
[2026-04-22 19:32:40] -rw-------. 1 boinc boinc       1026 Apr 22 19:31 memory_monitor_summary.json
[2026-04-22 19:32:40] -rw-------. 1 boinc boinc     294027 Apr 22 19:31 log.49820244._013892.job.log.tgz.1
[2026-04-22 19:32:40] -rw-------. 1 boinc boinc         95 Apr 22 19:31 pilot_heartbeat.json
[2026-04-22 19:32:40] -rw-------. 1 boinc boinc       6361 Apr 22 19:31 heartbeat_new.json
[2026-04-22 19:32:40] -rw-------. 1 boinc boinc       6252 Apr 22 19:31 heartbeat.json
[2026-04-22 19:32:40] -rw-r--r--. 1 boinc boinc       8192 Apr 22 19:32 boinc_mmap_file
[2026-04-22 19:32:40] -rw-r--r--. 1 boinc boinc         27 Apr 22 19:32 wrapper_checkpoint.txt
[2026-04-22 19:32:40] -rw-------. 1 boinc boinc       4900 Apr 22 19:32 pilotlog.txt
[2026-04-22 19:32:40] -rw-------. 1 boinc boinc     931549 Apr 22 19:32 log.49820244._013892.job.log.1
[2026-04-22 19:32:40] -rw-------. 1 boinc boinc        357 Apr 22 19:32 output.list
[2026-04-22 19:32:40] -rw-r--r--. 1 boinc boinc        410 Apr 22 19:32 runtime_log
[2026-04-22 19:32:40] -rw-------. 1 boinc boinc    1239040 Apr 22 19:32 result.tar.gz
[2026-04-22 19:32:40] -rw-r--r--. 1 boinc boinc       8826 Apr 22 19:32 runtime_log.err
[2026-04-22 19:32:40] -rw-------. 1 boinc boinc        662 Apr 22 19:32 5a642d6efde1.diag
[2026-04-22 19:32:40] -rw-r--r--. 1 boinc boinc      20787 Apr 22 19:32 stderr.txt
[2026-04-22 19:32:40] HITS file was successfully produced:
[2026-04-22 19:32:40] -rw-------. 1 boinc boinc 273484865 Apr 22 19:31 shared/HITS.pool.root.1
[2026-04-22 19:32:40]  *** Contents of shared directory: ***
[2026-04-22 19:32:40] total 2447404
[2026-04-22 19:32:40] -rw-r--r--. 2 boinc boinc 2230728725 Apr 22 16:46 ATLAS.root_0
[2026-04-22 19:32:40] -rw-r--r--. 2 boinc boinc      15665 Apr 22 16:46 start_atlas.sh
[2026-04-22 19:32:40] -rw-r--r--. 2 boinc boinc     656916 Apr 22 16:46 input.tar.gz
[2026-04-22 19:32:40] -rw-------. 1 boinc boinc  273484865 Apr 22 19:31 HITS.pool.root.1
[2026-04-22 19:32:40] -rw-------. 1 boinc boinc    1239040 Apr 22 19:32 result.tar.gz
19:32:42 (3369573): run_atlas exited; CPU time 38588.626319
19:32:42 (3369573): called boinc_finish(0)

</stderr_txt>
]]>

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