Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:21:58 (1948137): wrapper (7.7.26015): starting
09:21:58 (1948137): wrapper: running run_atlas (--nthreads 4)
[2026-04-22 09:21:58] Arguments: --nthreads 4
[2026-04-22 09:21:58] Threads: 4
[2026-04-22 09:21:58] Checking for CVMFS
[2026-04-22 09:21:58] No cvmfs_config command found, will try listing directly
[2026-04-22 09:21:58] CVMFS is ok
[2026-04-22 09:21:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-22 09:21:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-22 09:21:58] Further information can be found at the LHC@home message board.
[2026-04-22 09:21:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-22 09:21:58] Checking for apptainer binary...
[2026-04-22 09:21:58] which: no apptainer in ((null))
[2026-04-22 09:21:58] apptainer is not installed, using version from CVMFS
[2026-04-22 09:21:58] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-22 09:21:58] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot88/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2026-04-22 09:21:58] apptainer works
[2026-04-22 09:21:58] Set ATHENA_PROC_NUMBER=4
[2026-04-22 09:21:58] Set ATHENA_CORE_NUMBER=4
[2026-04-22 09:21:58] Starting ATLAS job with PandaID=7105411039
[2026-04-22 09:21:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot88/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-22 12:20:19]  *** The last 200 lines of the pilot log: ***
[2026-04-22 12:20:19] 2026-04-22 10:18:39,466 | INFO     | preparing for final server update for job 7105411039 in state='finished'
[2026-04-22 12:20:19] 2026-04-22 10:18:40,144 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-04-22 12:20:19] 2026-04-22 10:18:40,145 | INFO     | reading metadata from: /var/lib/boinc/var/slot88/slots/0/PanDA_Pilot-7105411039/jobReport.json
[2026-04-22 12:20:19] 2026-04-22 10:18:40,147 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot88/slots/0/workernode_map.json
[2026-04-22 12:20:19] 2026-04-22 10:18:40,148 | INFO     | this job has now completed (state=finished)
[2026-04-22 12:20:19] 2026-04-22 10:18:40,148 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-22 12:20:19] 2026-04-22 10:18:40,148 | INFO     | log transfer has been attempted: DONE
[2026-04-22 12:20:19] 2026-04-22 10:18:40,148 | INFO     | job 7105411039 has finished - writing final server update
[2026-04-22 12:20:19] 2026-04-22 10:18:40,148 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_9550/.job.ad'
[2026-04-22 12:20:19] 2026-04-22 10:18:40,148 | INFO     | total number of processed events: 400 (read)
[2026-04-22 12:20:19] 2026-04-22 10:18:40,170 | INFO     | using path: /var/lib/boinc/var/slot88/slots/0/PanDA_Pilot-7105411039/memory_monitor_summary.json (trf name=prmon)
[2026-04-22 12:20:19] 2026-04-22 10:18:40,171 | INFO     | extracted standard info from prmon json
[2026-04-22 12:20:19] 2026-04-22 10:18:40,171 | INFO     | extracted standard memory fields from prmon json
[2026-04-22 12:20:19] 2026-04-22 10:18:40,171 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-22 12:20:19] 2026-04-22 10:18:40,171 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-22 12:20:19] 2026-04-22 10:18:40,174 | INFO     | fitting pss+swap vs Time
[2026-04-22 12:20:19] 2026-04-22 10:18:40,174 | INFO     | sum of square deviations: 1605470102.0
[2026-04-22 12:20:19] 2026-04-22 10:18:40,175 | INFO     | sum of deviations: -53875378973.99999
[2026-04-22 12:20:19] 2026-04-22 10:18:40,175 | INFO     | mean x (centered): 0.0
[2026-04-22 12:20:19] 2026-04-22 10:18:40,175 | INFO     | mean y: 2471624.098265896
[2026-04-22 12:20:19] 2026-04-22 10:18:40,175 | INFO     | intersect: 2471624.098265896
[2026-04-22 12:20:19] 2026-04-22 10:18:40,176 | INFO     | chi2: 1.4207418756380803
[2026-04-22 12:20:19] 2026-04-22 10:18:40,176 | INFO     | sum of square deviations: 1470248962.0
[2026-04-22 12:20:19] 2026-04-22 10:18:40,177 | INFO     | sum of deviations: -51406136610.99999
[2026-04-22 12:20:19] 2026-04-22 10:18:40,177 | INFO     | mean x (centered): 0.0
[2026-04-22 12:20:19] 2026-04-22 10:18:40,177 | INFO     | mean y: 2474409.630952381
[2026-04-22 12:20:19] 2026-04-22 10:18:40,177 | INFO     | intersect: 2474409.630952381
[2026-04-22 12:20:19] 2026-04-22 10:18:40,177 | INFO     | chi2: 1.410669542978991
[2026-04-22 12:20:19] 2026-04-22 10:18:40,177 | INFO     | current chi2=1.410669542978991 (change=0.7089488127155809 %)
[2026-04-22 12:20:19] 2026-04-22 10:18:40,177 | INFO     | right removable region: 167
[2026-04-22 12:20:19] 2026-04-22 10:18:40,178 | INFO     | sum of square deviations: 1470248962.0
[2026-04-22 12:20:19] 2026-04-22 10:18:40,179 | INFO     | sum of deviations: -67571330926.5
[2026-04-22 12:20:19] 2026-04-22 10:18:40,179 | INFO     | mean x (centered): 0.0
[2026-04-22 12:20:19] 2026-04-22 10:18:40,179 | INFO     | mean y: 2486670.5178571427
[2026-04-22 12:20:19] 2026-04-22 10:18:40,179 | INFO     | intersect: 2486670.5178571427
[2026-04-22 12:20:19] 2026-04-22 10:18:40,179 | INFO     | chi2: 0.3296900073139337
[2026-04-22 12:20:19] 2026-04-22 10:18:40,179 | INFO     | current chi2=0.3296900073139337 (change=76.79451750052316 %)
[2026-04-22 12:20:19] 2026-04-22 10:18:40,180 | INFO     | sum of square deviations: 1342841922.0
[2026-04-22 12:20:19] 2026-04-22 10:18:40,180 | INFO     | sum of deviations: -61146270436.0
[2026-04-22 12:20:19] 2026-04-22 10:18:40,181 | INFO     | mean x (centered): 0.0
[2026-04-22 12:20:19] 2026-04-22 10:18:40,181 | INFO     | mean y: 2478974.288343558
[2026-04-22 12:20:19] 2026-04-22 10:18:40,181 | INFO     | intersect: 2478974.288343558
[2026-04-22 12:20:19] 2026-04-22 10:18:40,181 | INFO     | chi2: 0.32903672009348073
[2026-04-22 12:20:19] 2026-04-22 10:18:40,181 | INFO     | current chi2=0.32903672009348073 (change=0.19815196274084393 %)
[2026-04-22 12:20:19] 2026-04-22 10:18:40,181 | INFO     | left removable region: 10
[2026-04-22 12:20:19] 2026-04-22 10:18:40,181 | INFO     | sum of square deviations: 1199940638.0
[2026-04-22 12:20:19] 2026-04-22 10:18:40,182 | INFO     | sum of deviations: -58140517457.0
[2026-04-22 12:20:19] 2026-04-22 10:18:40,182 | INFO     | mean x (centered): 0.0
[2026-04-22 12:20:19] 2026-04-22 10:18:40,182 | INFO     | mean y: 2482825.006369427
[2026-04-22 12:20:19] 2026-04-22 10:18:40,183 | INFO     | intersect: 2482825.006369427
[2026-04-22 12:20:19] 2026-04-22 10:18:40,183 | INFO     | chi2: 0.31400917808405376
[2026-04-22 12:20:19] 2026-04-22 10:18:40,183 | INFO     | current memory leak: -48.45 B/s (using 157 data points, chi2=0.31)
[2026-04-22 12:20:19] 2026-04-22 10:18:40,183 | INFO     | could have reported an average CPU frequency of 2797 MHz (9 samples)
[2026-04-22 12:20:19] 2026-04-22 10:18:40,183 | INFO     | ..............................
[2026-04-22 12:20:19] 2026-04-22 10:18:40,184 | INFO     | . Timing measurements:
[2026-04-22 12:20:19] 2026-04-22 10:18:40,184 | INFO     | . get job = 0 s
[2026-04-22 12:20:19] 2026-04-22 10:18:40,184 | INFO     | . initial setup = 5 s
[2026-04-22 12:20:19] 2026-04-22 10:18:40,184 | INFO     | . payload setup = 10 s
[2026-04-22 12:20:19] 2026-04-22 10:18:40,184 | INFO     | . stage-in = 0 s
[2026-04-22 12:20:19] 2026-04-22 10:18:40,184 | INFO     | . payload execution = 10557 s
[2026-04-22 12:20:19] 2026-04-22 10:18:40,184 | INFO     | . stage-out = 0 s
[2026-04-22 12:20:19] 2026-04-22 10:18:40,184 | INFO     | . log creation = 0 s
[2026-04-22 12:20:19] 2026-04-22 10:18:40,184 | INFO     | ..............................
[2026-04-22 12:20:19] 2026-04-22 10:18:40,628 | INFO     | 
[2026-04-22 12:20:19] 2026-04-22 10:18:40,628 | INFO     | job summary report
[2026-04-22 12:20:19] 2026-04-22 10:18:40,628 | INFO     | --------------------------------------------------
[2026-04-22 12:20:19] 2026-04-22 10:18:40,628 | INFO     | PanDA job id: 7105411039
[2026-04-22 12:20:19] 2026-04-22 10:18:40,628 | INFO     | task id: 49820244
[2026-04-22 12:20:19] 2026-04-22 10:18:40,628 | INFO     | errors: (none)
[2026-04-22 12:20:19] 2026-04-22 10:18:40,628 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-22 12:20:19] 2026-04-22 10:18:40,628 | INFO     | pilot state: finished 
[2026-04-22 12:20:19] 2026-04-22 10:18:40,628 | INFO     | transexitcode: 0
[2026-04-22 12:20:19] 2026-04-22 10:18:40,628 | INFO     | exeerrorcode: 0
[2026-04-22 12:20:19] 2026-04-22 10:18:40,629 | INFO     | exeerrordiag: 
[2026-04-22 12:20:19] 2026-04-22 10:18:40,629 | INFO     | exitcode: 0
[2026-04-22 12:20:19] 2026-04-22 10:18:40,629 | INFO     | exitmsg: OK
[2026-04-22 12:20:19] 2026-04-22 10:18:40,629 | INFO     | cpuconsumptiontime: 41084 s
[2026-04-22 12:20:19] 2026-04-22 10:18:40,629 | INFO     | nevents: 400
[2026-04-22 12:20:19] 2026-04-22 10:18:40,629 | INFO     | neventsw: 0
[2026-04-22 12:20:19] 2026-04-22 10:18:40,629 | INFO     | pid: 1957927
[2026-04-22 12:20:19] 2026-04-22 10:18:40,629 | INFO     | pgrp: 1957927
[2026-04-22 12:20:19] 2026-04-22 10:18:40,629 | INFO     | corecount: 4
[2026-04-22 12:20:19] 2026-04-22 10:18:40,629 | INFO     | event service: False
[2026-04-22 12:20:19] 2026-04-22 10:18:40,629 | INFO     | sizes: {0: 2276390, 11: 2276390, 10570: 2305551, 10573: 2314627, 10574: 2314829}
[2026-04-22 12:20:19] 2026-04-22 10:18:40,629 | INFO     | --------------------------------------------------
[2026-04-22 12:20:19] 2026-04-22 10:18:40,629 | INFO     | 
[2026-04-22 12:20:19] 2026-04-22 10:18:40,630 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot88/slots/0
[2026-04-22 12:20:19] 2026-04-22 10:18:40,657 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-22 12:20:19] 2026-04-22 10:18:40,658 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-22 12:20:19] 2026-04-22 10:18:40,658 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-22 12:20:19] 2026-04-22 10:18:40,658 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-22 12:20:19] 2026-04-22 10:18:40,658 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-22 12:20:19] 2026-04-22 10:18:40,658 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-22 12:20:19] 2026-04-22 10:18:40,658 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-22 12:20:19] 2026-04-22 10:18:40,658 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-22 12:20:19] 2026-04-22 10:18:40,659 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-22 12:20:19] 2026-04-22 10:18:40,659 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-22 12:20:19] 2026-04-22 10:18:40,659 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-22 12:20:19] 2026-04-22 10:18:40,659 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-22 12:20:19] 2026-04-22 10:18:40,659 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-22 12:20:19] 2026-04-22 10:18:40,659 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-22 12:20:19] 2026-04-22 10:18:40,659 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-22 12:20:19] 2026-04-22 10:18:40,659 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-22 12:20:19] 2026-04-22 10:18:40,659 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-22 12:20:19] 2026-04-22 10:18:40,659 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-22 12:20:19] 2026-04-22 10:18:40,659 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-22 12:20:19] 2026-04-22 10:18:40,660 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-22 12:20:19] 2026-04-22 10:18:40,660 | INFO     | job 7105411039 has completed (purged errors)
[2026-04-22 12:20:19] 2026-04-22 10:18:40,660 | INFO     | overall cleanup function is called
[2026-04-22 12:20:19] 2026-04-22 10:18:41,669 | INFO     | --- collectZombieJob: --- 10, [1957927]
[2026-04-22 12:20:19] 2026-04-22 10:18:41,669 | INFO     | zombie collector waiting for pid 1957927
[2026-04-22 12:20:19] 2026-04-22 10:18:41,669 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-22 12:20:19] 2026-04-22 10:18:41,669 | INFO     | collected zombie processes
[2026-04-22 12:20:19] 2026-04-22 10:18:41,669 | INFO     | will attempt to kill all subprocesses of pid=1957927
[2026-04-22 12:20:19] 2026-04-22 10:18:42,361 | INFO     | process IDs to be killed: [1957927] (in reverse order)
[2026-04-22 12:20:19] 2026-04-22 10:18:42,545 | WARNING  | found no corresponding commands to process id(s)
[2026-04-22 12:20:19] 2026-04-22 10:18:42,546 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-22 12:20:19] 2026-04-22 10:18:42,572 | INFO     | did not find any defunct processes belonging to 1957927
[2026-04-22 12:20:19] 2026-04-22 10:18:42,598 | INFO     | did not find any defunct processes belonging to 1957927
[2026-04-22 12:20:19] 2026-04-22 10:18:42,599 | INFO     | Ready for new job
[2026-04-22 12:20:19] 2026-04-22 10:18:42,600 | INFO     | **************************************
[2026-04-22 12:20:19] 2026-04-22 10:18:42,601 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-22 12:20:19] 2026-04-22 10:18:42,601 | INFO     | **************************************
[2026-04-22 12:20:19] 2026-04-22 10:18:42,601 | INFO     | 
[2026-04-22 12:20:19] 2026-04-22 10:18:42,608 | INFO     | architecture information:
[2026-04-22 12:20:19] 2026-04-22 10:18:42,609 | INFO     | executing command: cat /etc/os-release
[2026-04-22 12:20:19] 2026-04-22 10:18:42,627 | INFO     | cat /etc/os-release:
[2026-04-22 12:20:19] NAME="CentOS Linux"
[2026-04-22 12:20:19] VERSION="7 (Core)"
[2026-04-22 12:20:19] ID="centos"
[2026-04-22 12:20:19] ID_LIKE="rhel fedora"
[2026-04-22 12:20:19] VERSION_ID="7"
[2026-04-22 12:20:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-22 12:20:19] ANSI_COLOR="0;31"
[2026-04-22 12:20:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-22 12:20:19] HOME_URL="https://www.centos.org/"
[2026-04-22 12:20:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-22 12:20:19] 
[2026-04-22 12:20:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-22 12:20:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-22 12:20:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-22 12:20:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-22 12:20:19] 
[2026-04-22 12:20:19] 2026-04-22 10:18:42,627 | INFO     | **************************************
[2026-04-22 12:20:19] 2026-04-22 10:18:43,130 | INFO     | executing command: df -mP /var/lib/boinc/var/slot88/slots/0
[2026-04-22 12:20:19] 2026-04-22 10:18:43,150 | INFO     | sufficient remaining disk space (240043163648 B)
[2026-04-22 12:20:19] 2026-04-22 10:18:43,150 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-22 12:20:19] 2026-04-22 10:18:43,150 | INFO     | current server update state: UPDATING_FINAL
[2026-04-22 12:20:19] 2026-04-22 10:18:43,150 | INFO     | update_server=False
[2026-04-22 12:20:19] 2026-04-22 10:18:43,150 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-22 12:20:19] 2026-04-22 10:18:43,208 | INFO     | all job control threads have been joined
[2026-04-22 12:20:19] 2026-04-22 10:18:43,553 | INFO     | all data control threads have been joined
[2026-04-22 12:20:19] 2026-04-22 10:18:43,561 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-22 12:20:19] 2026-04-22 10:18:43,561 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-22 12:20:19] 2026-04-22 10:18:43,561 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-22 12:20:19] 2026-04-22 10:18:43,561 | INFO     | will abort loop
[2026-04-22 12:20:19] 2026-04-22 10:18:44,009 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-22 12:20:19] 2026-04-22 10:18:44,055 | INFO     | all payload control threads have been joined
[2026-04-22 12:20:19] 2026-04-22 10:18:44,156 | INFO     | [job] retrieve thread has finished
[2026-04-22 12:20:19] 2026-04-22 10:18:44,213 | INFO     | [job] control thread has finished
[2026-04-22 12:20:19] 2026-04-22 10:18:44,554 | INFO     | [data] control thread has finished
[2026-04-22 12:20:19] 2026-04-22 10:18:44,566 | INFO     | [job] job monitor thread has finished
[2026-04-22 12:20:19] 2026-04-22 10:18:44,582 | INFO     | [job] validate thread has finished
[2026-04-22 12:20:19] 2026-04-22 10:18:44,835 | INFO     | [job] create_data_payload thread has finished
[2026-04-22 12:20:19] 2026-04-22 10:18:44,835 | INFO     | [payload] execute_payloads thread has finished
[2026-04-22 12:20:19] 2026-04-22 10:18:44,863 | INFO     | [payload] validate_pre thread has finished
[2026-04-22 12:20:19] 2026-04-22 10:18:45,060 | INFO     | [payload] control thread has finished
[2026-04-22 12:20:19] 2026-04-22 10:18:45,207 | INFO     | [data] copytool_in thread has finished
[2026-04-22 12:20:19] 2026-04-22 10:18:45,283 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-22 12:20:19] 2026-04-22 10:18:45,403 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-22 12:20:19] 2026-04-22 10:18:45,421 | INFO     | [payload] validate_post thread has finished
[2026-04-22 12:20:19] 2026-04-22 10:18:45,711 | INFO     | [payload] failed_post thread has finished
[2026-04-22 12:20:19] 2026-04-22 10:18:46,014 | INFO     | [data] copytool_out thread has finished
[2026-04-22 12:20:19] 2026-04-22 10:18:46,288 | INFO     | [job] queue monitor thread has finished
[2026-04-22 12:20:19] 2026-04-22 10:18:49,409 | INFO     | [data] queue_monitor thread has finished
[2026-04-22 12:20:19] 2026-04-22 10:18:53,247 | INFO     | job.realtimelogging is not enabled
[2026-04-22 12:20:19] 2026-04-22 10:18:54,248 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-22 12:20:19] 2026-04-22 10:19:13,314 | INFO     | PID=1952677 has CPU usage=9.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-22 12:20:19] 2026-04-22 10:19:13,314 | INFO     | .. there are 7 such processes running
[2026-04-22 12:20:19] 2026-04-22 10:19:13,315 | INFO     | found 0 job(s) in 20 queues
[2026-04-22 12:20:19] 2026-04-22 10:19:13,315 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-22 12:20:19] 2026-04-22 10:19:13,315 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-22 12:20:19] 2026-04-22 10:19:28,799 | INFO     | [monitor] cgroup control has ended
[2026-04-22 12:20:19] 2026-04-22 10:19:29,804 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22743620388672)>', '<ExcThread(monitor, started 22743369373440)>']
[2026-04-22 12:20:19] 2026-04-22 10:19:30,400 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-22 12:20:19] 2026-04-22 10:19:30,400 | INFO     | [monitor] control thread has ended
[2026-04-22 12:20:19] 2026-04-22 10:19:34,830 | INFO     | all workflow threads have been joined
[2026-04-22 12:20:19] 2026-04-22 10:19:34,830 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-22 12:20:19] 2026-04-22 10:19:34,830 | INFO     | traces error code: 0
[2026-04-22 12:20:19] 2026-04-22 10:19:34,830 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-22 12:20:19] 2026-04-22 10:19:34,993 [wrapper] ==== pilot stdout END ====
[2026-04-22 12:20:19] 2026-04-22 10:19:34,995 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-22 12:20:19] 2026-04-22 10:19:34,997 [wrapper] pilotpid: 1952677
[2026-04-22 12:20:19] 2026-04-22 10:19:35,000 [wrapper] Pilot exit status: 0
[2026-04-22 12:20:19] 2026-04-22 10:19:35,012 [wrapper] pandaids: 7105411039
[2026-04-22 12:20:19] 2026-04-22 10:19:35,140 [wrapper] cleanup supervisor_pilot 2179660 1952678
[2026-04-22 12:20:19] 2026-04-22 10:19:35,144 [wrapper] Test setup, not cleaning
[2026-04-22 12:20:19] 2026-04-22 10:19:35,146 [wrapper] apfmon messages muted
[2026-04-22 12:20:19] 2026-04-22 10:19:35,148 [wrapper] ==== wrapper stdout END ====
[2026-04-22 12:20:19] 2026-04-22 10:19:35,150 [wrapper] ==== wrapper stderr END ====
[2026-04-22 12:20:19]  *** Error codes and diagnostics ***
[2026-04-22 12:20:19]     "exeErrorCode": 0,
[2026-04-22 12:20:19]     "pilotErrorCode": 0,
[2026-04-22 12:20:19]  *** Listing of results directory ***
[2026-04-22 12:20:19] total 2457360
[2026-04-22 12:20:19] -rwx------. 1 boinc boinc      36322 Apr 21 13:06 runpilot2-wrapper.sh
[2026-04-22 12:20:19] -rw-r--r--. 1 boinc boinc     644190 Apr 21 14:32 pilot3.tar.gz
[2026-04-22 12:20:19] -rw-r--r--. 1 boinc boinc       5094 Apr 21 14:43 queuedata.json
[2026-04-22 12:20:19] -rw-r--r--. 1 boinc boinc        100 Apr 22 09:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-22 12:20:19] -rwxr-xr-x. 1 boinc boinc       7986 Apr 22 09:21 run_atlas
[2026-04-22 12:20:19] -rw-r--r--. 1 boinc boinc        105 Apr 22 09:21 job.xml
[2026-04-22 12:20:19] -rw-r--r--. 2 boinc boinc 2240811311 Apr 22 09:21 EVNT.49820242._000034.pool.root.1
[2026-04-22 12:20:19] -rw-r--r--. 1 boinc boinc       6538 Apr 22 09:21 init_data.xml
[2026-04-22 12:20:19] -rw-r--r--. 2 boinc boinc      15665 Apr 22 09:21 start_atlas.sh
[2026-04-22 12:20:19] drwxrwx--x. 2 boinc boinc       4096 Apr 22 09:21 shared
[2026-04-22 12:20:19] -rw-r--r--. 2 boinc boinc     656925 Apr 22 09:21 input.tar.gz
[2026-04-22 12:20:19] -rw-r--r--. 1 boinc boinc          0 Apr 22 09:21 boinc_lockfile
[2026-04-22 12:20:19] -rw-r--r--. 1 boinc boinc       2551 Apr 22 09:21 pandaJob.out
[2026-04-22 12:20:19] -rw-------. 1 boinc boinc     997132 Apr 22 09:22 agis_schedconf.cvmfs.json
[2026-04-22 12:20:19] -rw-------. 1 boinc boinc    1509089 Apr 22 09:22 agis_ddmendpoints.agis.ALL.json
[2026-04-22 12:20:19] -rw-------. 1 boinc boinc        440 Apr 22 09:22 workernode_map.json
[2026-04-22 12:20:19] drwx------. 5 boinc boinc       4096 Apr 22 09:22 pilot3
[2026-04-22 12:20:19] -rw-------. 1 boinc boinc  268773470 Apr 22 12:18 HITS.49820244._014808.pool.root.1
[2026-04-22 12:20:19] -rw-r--r--. 1 boinc boinc        488 Apr 22 12:18 boinc_task_state.xml
[2026-04-22 12:20:19] -rw-------. 1 boinc boinc       1027 Apr 22 12:18 memory_monitor_summary.json
[2026-04-22 12:20:19] -rw-------. 1 boinc boinc     364154 Apr 22 12:18 log.49820244._014808.job.log.tgz.1
[2026-04-22 12:20:19] -rw-------. 1 boinc boinc       6372 Apr 22 12:18 heartbeat_new.json
[2026-04-22 12:20:19] -rw-------. 1 boinc boinc       6263 Apr 22 12:18 heartbeat.json
[2026-04-22 12:20:19] -rw-------. 1 boinc boinc         95 Apr 22 12:19 pilot_heartbeat.json
[2026-04-22 12:20:19] -rw-------. 1 boinc boinc       5086 Apr 22 12:19 pilotlog.txt
[2026-04-22 12:20:19] -rw-------. 1 boinc boinc     983331 Apr 22 12:19 log.49820244._014808.job.log.1
[2026-04-22 12:20:19] -rw-------. 1 boinc boinc        357 Apr 22 12:19 output.list
[2026-04-22 12:20:19] -rw-r--r--. 1 boinc boinc        410 Apr 22 12:19 runtime_log
[2026-04-22 12:20:19] -rw-------. 1 boinc boinc    1361920 Apr 22 12:19 result.tar.gz
[2026-04-22 12:20:19] -rw-r--r--. 1 boinc boinc       8827 Apr 22 12:19 runtime_log.err
[2026-04-22 12:20:19] -rw-------. 1 boinc boinc        665 Apr 22 12:19 5a3d42acaba9.diag
[2026-04-22 12:20:19] -rw-r--r--. 1 boinc boinc         27 Apr 22 12:20 wrapper_checkpoint.txt
[2026-04-22 12:20:19] -rw-r--r--. 1 boinc boinc       8192 Apr 22 12:20 boinc_mmap_file
[2026-04-22 12:20:19] -rw-r--r--. 1 boinc boinc      21021 Apr 22 12:20 stderr.txt
[2026-04-22 12:20:19] HITS file was successfully produced:
[2026-04-22 12:20:19] -rw-------. 1 boinc boinc 268773470 Apr 22 12:18 shared/HITS.pool.root.1
[2026-04-22 12:20:19]  *** Contents of shared directory: ***
[2026-04-22 12:20:19] total 2452772
[2026-04-22 12:20:19] -rw-r--r--. 2 boinc boinc 2240811311 Apr 22 09:21 ATLAS.root_0
[2026-04-22 12:20:19] -rw-r--r--. 2 boinc boinc      15665 Apr 22 09:21 start_atlas.sh
[2026-04-22 12:20:19] -rw-r--r--. 2 boinc boinc     656925 Apr 22 09:21 input.tar.gz
[2026-04-22 12:20:19] -rw-------. 1 boinc boinc  268773470 Apr 22 12:18 HITS.pool.root.1
[2026-04-22 12:20:19] -rw-------. 1 boinc boinc    1361920 Apr 22 12:19 result.tar.gz
12:20:20 (1948137): run_atlas exited; CPU time 41680.276804
12:20:20 (1948137): called boinc_finish(0)

</stderr_txt>
]]>

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