Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:08:08 (1470030): wrapper (7.7.26015): starting
14:08:08 (1470030): wrapper: running run_atlas (--nthreads 9)
[2026-04-21 14:08:08] Arguments: --nthreads 9
[2026-04-21 14:08:08] Threads: 9
[2026-04-21 14:08:08] Checking for CVMFS
[2026-04-21 14:08:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-21 14:08:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-21 14:08:09] Running cvmfs_config stat atlas.cern.ch
[2026-04-21 14:08:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-21 14:08:10] 2.13.3.0 4389 237536 214280 158699 2 209 26556025 32935937 13706 16776704 0 1084895753 99.711 835659506 32349 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-21 14:08:10] CVMFS is ok
[2026-04-21 14:08:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 14:08:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 14:08:10] Further information can be found at the LHC@home message board.
[2026-04-21 14:08:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 14:08:10] Checking for apptainer binary...
[2026-04-21 14:08:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-21 14:08:10] Running /usr/bin/apptainer --version
[2026-04-21 14:08:10] apptainer version 1.4.5-2.el9
[2026-04-21 14:08:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 14:08:10] c-8-24.aglt2.org
[2026-04-21 14:08:10] apptainer works
[2026-04-21 14:08:10] Set ATHENA_PROC_NUMBER=9
[2026-04-21 14:08:10] Set ATHENA_CORE_NUMBER=9
[2026-04-21 14:08:10] Starting ATLAS job with PandaID=7105419607
[2026-04-21 14:08:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-22 07:15:17]  *** The last 200 lines of the pilot log: ***
[2026-04-22 07:15:17] 2026-04-22 11:14:41,968 | INFO     | sum of deviations: 170928010766.5756
[2026-04-22 07:15:17] 2026-04-22 11:14:41,968 | INFO     | mean x (centered): 0.0
[2026-04-22 07:15:17] 2026-04-22 11:14:41,968 | INFO     | mean y: 2627883.7591674924
[2026-04-22 07:15:17] 2026-04-22 11:14:41,969 | INFO     | intersect: 2627883.7591674924
[2026-04-22 07:15:17] 2026-04-22 11:14:41,970 | INFO     | chi2: 2.883145054060731
[2026-04-22 07:15:17] 2026-04-22 11:14:41,972 | INFO     | sum of square deviations: 313807731134.42615
[2026-04-22 07:15:17] 2026-04-22 11:14:41,997 | INFO     | sum of deviations: 311193006443.84314
[2026-04-22 07:15:17] 2026-04-22 11:14:41,998 | INFO     | mean x (centered): 0.0
[2026-04-22 07:15:17] 2026-04-22 11:14:41,998 | INFO     | mean y: 2632410.152390438
[2026-04-22 07:15:17] 2026-04-22 11:14:41,998 | INFO     | intersect: 2632410.152390438
[2026-04-22 07:15:17] 2026-04-22 11:14:41,999 | INFO     | chi2: 1.3563196729690072
[2026-04-22 07:15:17] 2026-04-22 11:14:42,000 | INFO     | current chi2=1.3563196729690072 (change=52.95693946932308 %)
[2026-04-22 07:15:17] 2026-04-22 11:14:42,001 | INFO     | sum of square deviations: 309142761071.21497
[2026-04-22 07:15:17] 2026-04-22 11:14:42,046 | INFO     | sum of deviations: 308246901638.0829
[2026-04-22 07:15:17] 2026-04-22 11:14:42,046 | INFO     | mean x (centered): 0.0
[2026-04-22 07:15:17] 2026-04-22 11:14:42,046 | INFO     | mean y: 2632313.782782783
[2026-04-22 07:15:17] 2026-04-22 11:14:42,046 | INFO     | intersect: 2632313.782782783
[2026-04-22 07:15:17] 2026-04-22 11:14:42,048 | INFO     | chi2: 1.3563168626485114
[2026-04-22 07:15:17] 2026-04-22 11:14:42,048 | INFO     | current chi2=1.3563168626485114 (change=0.00020720192679355456 %)
[2026-04-22 07:15:17] 2026-04-22 11:14:42,048 | INFO     | right removable region: 998
[2026-04-22 07:15:17] 2026-04-22 11:14:42,056 | INFO     | sum of square deviations: 313807104054.42615
[2026-04-22 07:15:17] 2026-04-22 11:14:42,107 | INFO     | sum of deviations: 23048571687.2948
[2026-04-22 07:15:17] 2026-04-22 11:14:42,114 | INFO     | mean x (centered): 0.0
[2026-04-22 07:15:17] 2026-04-22 11:14:42,114 | INFO     | mean y: 2632657.40438247
[2026-04-22 07:15:17] 2026-04-22 11:14:42,114 | INFO     | intersect: 2632657.40438247
[2026-04-22 07:15:17] 2026-04-22 11:14:42,115 | INFO     | chi2: 1.5777886436082622
[2026-04-22 07:15:17] 2026-04-22 11:14:42,116 | INFO     | current chi2=1.5777886436082622 (change=45.27543311128086 %)
[2026-04-22 07:15:17] 2026-04-22 11:14:42,122 | INFO     | sum of square deviations: 309141568154.1582
[2026-04-22 07:15:17] 2026-04-22 11:14:42,181 | INFO     | sum of deviations: 4032041343.5545044
[2026-04-22 07:15:17] 2026-04-22 11:14:42,181 | INFO     | mean x (centered): 0.0
[2026-04-22 07:15:17] 2026-04-22 11:14:42,181 | INFO     | mean y: 2633277.911911912
[2026-04-22 07:15:17] 2026-04-22 11:14:42,182 | INFO     | intersect: 2633277.911911912
[2026-04-22 07:15:17] 2026-04-22 11:14:42,183 | INFO     | chi2: 1.543699563769929
[2026-04-22 07:15:17] 2026-04-22 11:14:42,183 | INFO     | current chi2=1.543699563769929 (change=2.1605606033755334 %)
[2026-04-22 07:15:17] 2026-04-22 11:14:42,184 | INFO     | left removable region: 10
[2026-04-22 07:15:17] 2026-04-22 11:14:42,193 | INFO     | sum of square deviations: 299041880555.53796
[2026-04-22 07:15:17] 2026-04-22 11:14:42,273 | INFO     | sum of deviations: 141129400058.15372
[2026-04-22 07:15:17] 2026-04-22 11:14:42,274 | INFO     | mean x (centered): 0.0
[2026-04-22 07:15:17] 2026-04-22 11:14:42,274 | INFO     | mean y: 2637789.982793522
[2026-04-22 07:15:17] 2026-04-22 11:14:42,274 | INFO     | intersect: 2637789.982793522
[2026-04-22 07:15:17] 2026-04-22 11:14:42,275 | INFO     | chi2: 0.009367705757857345
[2026-04-22 07:15:17] 2026-04-22 11:14:42,276 | INFO     | current memory leak: 0.47 B/s (using 988 data points, chi2=0.01)
[2026-04-22 07:15:17] 2026-04-22 11:14:42,285 | INFO     | could have reported an average CPU frequency of 2600 MHz (38 samples)
[2026-04-22 07:15:17] 2026-04-22 11:14:42,285 | INFO     | ..............................
[2026-04-22 07:15:17] 2026-04-22 11:14:42,286 | INFO     | . Timing measurements:
[2026-04-22 07:15:17] 2026-04-22 11:14:42,286 | INFO     | . get job = 0 s
[2026-04-22 07:15:17] 2026-04-22 11:14:42,286 | INFO     | . initial setup = 15 s
[2026-04-22 07:15:17] 2026-04-22 11:14:42,286 | INFO     | . payload setup = 21 s
[2026-04-22 07:15:17] 2026-04-22 11:14:42,286 | INFO     | . stage-in = 0 s
[2026-04-22 07:15:17] 2026-04-22 11:14:42,286 | INFO     | . payload execution = 61514 s
[2026-04-22 07:15:17] 2026-04-22 11:14:42,286 | INFO     | . stage-out = 3 s
[2026-04-22 07:15:17] 2026-04-22 11:14:42,286 | INFO     | . log creation = 0 s
[2026-04-22 07:15:17] 2026-04-22 11:14:42,286 | INFO     | ..............................
[2026-04-22 07:15:17] 2026-04-22 11:14:42,787 | INFO     | 
[2026-04-22 07:15:17] 2026-04-22 11:14:42,789 | INFO     | job summary report
[2026-04-22 07:15:17] 2026-04-22 11:14:42,789 | INFO     | --------------------------------------------------
[2026-04-22 07:15:17] 2026-04-22 11:14:42,789 | INFO     | PanDA job id: 7105419607
[2026-04-22 07:15:17] 2026-04-22 11:14:42,789 | INFO     | task id: 49820244
[2026-04-22 07:15:17] 2026-04-22 11:14:42,789 | INFO     | errors: (none)
[2026-04-22 07:15:17] 2026-04-22 11:14:42,789 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-22 07:15:17] 2026-04-22 11:14:42,789 | INFO     | pilot state: finished 
[2026-04-22 07:15:17] 2026-04-22 11:14:42,789 | INFO     | transexitcode: 0
[2026-04-22 07:15:17] 2026-04-22 11:14:42,790 | INFO     | exeerrorcode: 0
[2026-04-22 07:15:17] 2026-04-22 11:14:42,790 | INFO     | exeerrordiag: 
[2026-04-22 07:15:17] 2026-04-22 11:14:42,790 | INFO     | exitcode: 0
[2026-04-22 07:15:17] 2026-04-22 11:14:42,790 | INFO     | exitmsg: OK
[2026-04-22 07:15:17] 2026-04-22 11:14:42,790 | INFO     | cpuconsumptiontime: 88028 s
[2026-04-22 07:15:17] 2026-04-22 11:14:42,790 | INFO     | nevents: 400
[2026-04-22 07:15:17] 2026-04-22 11:14:42,790 | INFO     | neventsw: 0
[2026-04-22 07:15:17] 2026-04-22 11:14:42,790 | INFO     | pid: 1481660
[2026-04-22 07:15:17] 2026-04-22 11:14:42,790 | INFO     | pgrp: 1481660
[2026-04-22 07:15:17] 2026-04-22 11:14:42,790 | INFO     | corecount: 9
[2026-04-22 07:15:17] 2026-04-22 11:14:42,790 | INFO     | event service: False
[2026-04-22 07:15:17] 2026-04-22 11:14:42,791 | INFO     | sizes: {0: 2274522, 1: 2276407, 2: 2276407, 61536: 2327819, 61541: 2336873, 61544: 2337011}
[2026-04-22 07:15:17] 2026-04-22 11:14:42,791 | INFO     | --------------------------------------------------
[2026-04-22 07:15:17] 2026-04-22 11:14:42,791 | INFO     | 
[2026-04-22 07:15:17] 2026-04-22 11:14:42,791 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-04-22 07:15:17] 2026-04-22 11:14:42,898 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-22 07:15:17] 2026-04-22 11:14:42,899 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-22 07:15:17] 2026-04-22 11:14:42,899 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-22 07:15:17] 2026-04-22 11:14:42,899 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-22 07:15:17] 2026-04-22 11:14:42,899 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-22 07:15:17] 2026-04-22 11:14:42,899 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-22 07:15:17] 2026-04-22 11:14:42,900 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-22 07:15:17] 2026-04-22 11:14:42,900 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-22 07:15:17] 2026-04-22 11:14:42,900 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-22 07:15:17] 2026-04-22 11:14:42,900 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-22 07:15:17] 2026-04-22 11:14:42,900 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-22 07:15:17] 2026-04-22 11:14:42,900 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-22 07:15:17] 2026-04-22 11:14:42,900 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-22 07:15:17] 2026-04-22 11:14:42,900 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-22 07:15:17] 2026-04-22 11:14:42,900 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-22 07:15:17] 2026-04-22 11:14:42,901 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-22 07:15:17] 2026-04-22 11:14:42,901 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-22 07:15:17] 2026-04-22 11:14:42,901 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-22 07:15:17] 2026-04-22 11:14:42,901 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-22 07:15:17] 2026-04-22 11:14:42,901 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-22 07:15:17] 2026-04-22 11:14:42,901 | INFO     | job 7105419607 has completed (purged errors)
[2026-04-22 07:15:17] 2026-04-22 11:14:42,902 | INFO     | overall cleanup function is called
[2026-04-22 07:15:17] 2026-04-22 11:14:43,916 | INFO     | --- collectZombieJob: --- 10, [1481660]
[2026-04-22 07:15:17] 2026-04-22 11:14:43,916 | INFO     | zombie collector waiting for pid 1481660
[2026-04-22 07:15:17] 2026-04-22 11:14:43,916 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-22 07:15:17] 2026-04-22 11:14:43,916 | INFO     | collected zombie processes
[2026-04-22 07:15:17] 2026-04-22 11:14:43,916 | INFO     | will attempt to kill all subprocesses of pid=1481660
[2026-04-22 07:15:17] 2026-04-22 11:14:45,298 | INFO     | process IDs to be killed: [1481660] (in reverse order)
[2026-04-22 07:15:17] 2026-04-22 11:14:45,573 | WARNING  | found no corresponding commands to process id(s)
[2026-04-22 07:15:17] 2026-04-22 11:14:45,574 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-22 07:15:17] 2026-04-22 11:14:45,598 | INFO     | did not find any defunct processes belonging to 1481660
[2026-04-22 07:15:17] 2026-04-22 11:14:45,743 | INFO     | did not find any defunct processes belonging to 1481660
[2026-04-22 07:15:17] 2026-04-22 11:14:45,744 | INFO     | Ready for new job
[2026-04-22 07:15:17] 2026-04-22 11:14:45,746 | INFO     | **************************************
[2026-04-22 07:15:17] 2026-04-22 11:14:45,746 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-22 07:15:17] 2026-04-22 11:14:45,773 | INFO     | **************************************
[2026-04-22 07:15:17] 2026-04-22 11:14:45,773 | INFO     | 
[2026-04-22 07:15:17] 2026-04-22 11:14:45,775 | INFO     | architecture information:
[2026-04-22 07:15:17] 2026-04-22 11:14:45,802 | INFO     | executing command: cat /etc/os-release
[2026-04-22 07:15:17] 2026-04-22 11:14:45,895 | INFO     | cat /etc/os-release:
[2026-04-22 07:15:17] NAME="CentOS Linux"
[2026-04-22 07:15:17] VERSION="7 (Core)"
[2026-04-22 07:15:17] ID="centos"
[2026-04-22 07:15:17] ID_LIKE="rhel fedora"
[2026-04-22 07:15:17] VERSION_ID="7"
[2026-04-22 07:15:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-22 07:15:17] ANSI_COLOR="0;31"
[2026-04-22 07:15:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-22 07:15:17] HOME_URL="https://www.centos.org/"
[2026-04-22 07:15:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-22 07:15:17] 
[2026-04-22 07:15:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-22 07:15:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-22 07:15:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-22 07:15:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-22 07:15:17] 
[2026-04-22 07:15:17] 2026-04-22 11:14:45,895 | INFO     | **************************************
[2026-04-22 07:15:17] 2026-04-22 11:14:45,931 | WARNING  | process 1481660 can no longer be monitored (due to stat problems) - aborting
[2026-04-22 07:15:17] 2026-04-22 11:14:46,352 | INFO     | using path: /tmp/boinchome/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-04-22 07:15:17] 2026-04-22 11:14:46,353 | INFO     | using path: /tmp/boinchome/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-04-22 07:15:17] 2026-04-22 11:14:46,357 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-04-22 07:15:17] 2026-04-22 11:14:46,357 | WARNING  | maxPSS not found in memory monitor output
[2026-04-22 07:15:17] 2026-04-22 11:14:46,358 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/1/PanDA_Pilot-7105419607/payload.stdout) since it has not been created yet
[2026-04-22 07:15:17] 2026-04-22 11:14:46,358 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-04-22 07:15:17] 2026-04-22 11:14:46,399 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-04-22 07:15:17] 2026-04-22 11:14:46,420 | INFO     | sufficient remaining disk space (67839721472 B)
[2026-04-22 07:15:17] 2026-04-22 11:14:46,421 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-04-22 07:15:17] 2026-04-22 11:14:46,421 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/1/PanDA_Pilot-7105419607/HITS.49820244._014885.pool.root.1 since it does not exist
[2026-04-22 07:15:17] 2026-04-22 11:14:46,470 | INFO     | sufficient remaining disk space (67839721472 B)
[2026-04-22 07:15:17] 2026-04-22 11:14:46,470 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-22 07:15:17] 2026-04-22 11:14:46,471 | INFO     | current server update state: UPDATING_FINAL
[2026-04-22 07:15:17] 2026-04-22 11:14:46,471 | INFO     | update_server=False
[2026-04-22 07:15:17] 2026-04-22 11:14:46,471 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-22 07:15:17] 2026-04-22 11:14:46,471 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-22 07:15:17] 2026-04-22 11:14:46,474 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-22 07:15:17] 2026-04-22 11:14:46,496 | INFO     | all job control threads have been joined
[2026-04-22 07:15:17] 2026-04-22 11:14:46,797 | INFO     | number of running child processes to parent process 1481660: 1
[2026-04-22 07:15:17] 2026-04-22 11:14:46,797 | INFO     | maximum number of monitored processes: 6
[2026-04-22 07:15:17] 2026-04-22 11:14:46,797 | INFO     | aborting job monitoring since job object (job id=7105419607) has expired
[2026-04-22 07:15:17] 2026-04-22 11:14:46,797 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-22 07:15:17] 2026-04-22 11:14:46,797 | INFO     | will abort loop
[2026-04-22 07:15:17] 2026-04-22 11:14:47,284 | INFO     | all data control threads have been joined
[2026-04-22 07:15:17] 2026-04-22 11:14:47,479 | INFO     | [job] retrieve thread has finished
[2026-04-22 07:15:17] 2026-04-22 11:14:47,503 | INFO     | [job] control thread has finished
[2026-04-22 07:15:17] 2026-04-22 11:14:47,558 | INFO     | all payload control threads have been joined
[2026-04-22 07:15:17] 2026-04-22 11:14:47,803 | INFO     | [job] job monitor thread has finished
[2026-04-22 07:15:17] 2026-04-22 11:14:47,858 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-22 07:15:17] 2026-04-22 11:14:48,003 | INFO     | [payload] failed_post thread has finished
[2026-04-22 07:15:17] 2026-04-22 11:14:48,040 | INFO     | [payload] validate_post thread has finished
[2026-04-22 07:15:17] 2026-04-22 11:14:48,069 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-22 07:15:17] 2026-04-22 11:14:48,290 | INFO     | [data] control thread has finished
[2026-04-22 07:15:17] 2026-04-22 11:14:48,477 | INFO     | [data] copytool_in thread has finished
[2026-04-22 07:15:17] 2026-04-22 11:14:48,480 | INFO     | [data] copytool_out thread has finished
[2026-04-22 07:15:17] 2026-04-22 11:14:48,564 | INFO     | [payload] control thread has finished
[2026-04-22 07:15:17] 2026-04-22 11:14:48,743 | INFO     | [job] validate thread has finished
[2026-04-22 07:15:17] 2026-04-22 11:14:48,743 | INFO     | [job] create_data_payload thread has finished
[2026-04-22 07:15:17] 2026-04-22 11:14:48,773 | INFO     | [payload] validate_pre thread has finished
[2026-04-22 07:15:17] 2026-04-22 11:14:48,804 | INFO     | [payload] execute_payloads thread has finished
[2026-04-22 07:15:17] 2026-04-22 11:14:48,864 | INFO     | [job] queue monitor thread has finished
[2026-04-22 07:15:17] 2026-04-22 11:14:50,487 | INFO     | [data] queue_monitor thread has finished
[2026-04-22 07:15:17] 2026-04-22 11:15:03,151 | INFO     | [monitor] cgroup control has ended
[2026-04-22 07:15:17] 2026-04-22 11:15:04,330 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140142590674752)>', '<ExcThread(monitor, started 140142309553920)>']
[2026-04-22 07:15:17] 2026-04-22 11:15:09,362 | INFO     | all workflow threads have been joined
[2026-04-22 07:15:17] 2026-04-22 11:15:09,368 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-22 07:15:17] 2026-04-22 11:15:09,368 | INFO     | traces error code: 0
[2026-04-22 07:15:17] 2026-04-22 11:15:09,368 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-22 07:15:17] 2026-04-22 11:15:16,019 | INFO     | PID=1475360 has CPU usage=9.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-22 07:15:17] 2026-04-22 11:15:16,020 | INFO     | .. there are 21 such processes running
[2026-04-22 07:15:17] 2026-04-22 11:15:16,021 | INFO     | found 0 job(s) in 20 queues
[2026-04-22 07:15:17] 2026-04-22 11:15:16,021 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-22 07:15:17] 2026-04-22 11:15:16,021 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-22 07:15:17] 2026-04-22 11:15:16,021 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-22 07:15:17] 2026-04-22 11:15:16,021 | INFO     | [monitor] control thread has ended
[2026-04-22 07:15:17] 2026-04-22 11:15:16,387 [wrapper] ==== pilot stdout END ====
[2026-04-22 07:15:17] 2026-04-22 11:15:16,441 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-22 07:15:17] 2026-04-22 11:15:16,474 [wrapper] pilotpid: 1475360
[2026-04-22 07:15:17] 2026-04-22 11:15:16,492 [wrapper] Pilot exit status: 0
[2026-04-22 07:15:17] 2026-04-22 11:15:16,607 [wrapper] pandaids: 7105419607
[2026-04-22 07:15:17] 2026-04-22 11:15:16,925 [wrapper] cleanup supervisor_pilot  969584 1475361
[2026-04-22 07:15:17] 2026-04-22 11:15:16,952 [wrapper] Test setup, not cleaning
[2026-04-22 07:15:17] 2026-04-22 11:15:16,991 [wrapper] apfmon messages muted
[2026-04-22 07:15:17] 2026-04-22 11:15:17,068 [wrapper] ==== wrapper stdout END ====
[2026-04-22 07:15:17] 2026-04-22 11:15:17,095 [wrapper] ==== wrapper stderr END ====
[2026-04-22 07:15:17]  *** Error codes and diagnostics ***
[2026-04-22 07:15:17]     "exeErrorCode": 0,
[2026-04-22 07:15:17]     "pilotErrorCode": 0,
[2026-04-22 07:15:17]  *** Listing of results directory ***
[2026-04-22 07:15:17] total 2471312
[2026-04-22 07:15:17] -rwx------. 1 boincer umatlas      36322 Apr 21 07:06 runpilot2-wrapper.sh
[2026-04-22 07:15:17] -rw-r--r--. 1 boincer umatlas     644190 Apr 21 08:32 pilot3.tar.gz
[2026-04-22 07:15:17] -rw-r--r--. 1 boincer umatlas       5094 Apr 21 08:43 queuedata.json
[2026-04-22 07:15:17] -rw-r--r--. 1 boincer umatlas        100 Apr 21 14:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-22 07:15:17] -rwxr-xr-x. 1 boincer umatlas       7986 Apr 21 14:08 run_atlas
[2026-04-22 07:15:17] -rw-r--r--. 1 boincer umatlas        105 Apr 21 14:08 job.xml
[2026-04-22 07:15:17] -rw-r--r--. 2 boincer umatlas 2241440418 Apr 21 14:08 EVNT.49820242._000032.pool.root.1
[2026-04-22 07:15:17] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 14:08 start_atlas.sh
[2026-04-22 07:15:17] drwxrwx--x. 2 boincer umatlas       4096 Apr 21 14:08 shared
[2026-04-22 07:15:17] -rw-r--r--. 2 boincer umatlas     656926 Apr 21 14:08 input.tar.gz
[2026-04-22 07:15:17] -rw-r--r--. 1 boincer umatlas          0 Apr 21 14:08 boinc_lockfile
[2026-04-22 07:15:17] -rw-r--r--. 1 boincer umatlas       2551 Apr 21 14:08 pandaJob.out
[2026-04-22 07:15:17] -rw-------. 1 boincer umatlas         57 Apr 21 14:08 setup.sh.local
[2026-04-22 07:15:17] -rw-------. 1 boincer umatlas     994998 Apr 21 14:08 agis_schedconf.cvmfs.json
[2026-04-22 07:15:17] -rw-------. 1 boincer umatlas        440 Apr 21 14:08 workernode_map.json
[2026-04-22 07:15:17] drwx------. 5 boincer umatlas       4096 Apr 21 14:08 pilot3
[2026-04-22 07:15:17] -rw-r--r--. 1 boincer umatlas       6576 Apr 22 07:10 init_data.xml
[2026-04-22 07:15:17] -rw-------. 1 boincer umatlas  274679615 Apr 22 07:13 HITS.49820244._014885.pool.root.1
[2026-04-22 07:15:17] -rw-r--r--. 1 boincer umatlas        489 Apr 22 07:13 boinc_task_state.xml
[2026-04-22 07:15:17] -rw-------. 1 boincer umatlas       1057 Apr 22 07:14 memory_monitor_summary.json
[2026-04-22 07:15:17] -rw-------. 1 boincer umatlas    1509089 Apr 22 07:14 agis_ddmendpoints.agis.ALL.json
[2026-04-22 07:15:17] -rw-------. 1 boincer umatlas     903108 Apr 22 07:14 log.49820244._014885.job.log.tgz.1
[2026-04-22 07:15:17] -rw-------. 1 boincer umatlas       6428 Apr 22 07:14 heartbeat_new.json
[2026-04-22 07:15:17] -rw-------. 1 boincer umatlas       6319 Apr 22 07:14 heartbeat.json
[2026-04-22 07:15:17] -rw-r--r--. 1 boincer umatlas       8192 Apr 22 07:15 boinc_mmap_file
[2026-04-22 07:15:17] -rw-r--r--. 1 boincer umatlas         28 Apr 22 07:15 wrapper_checkpoint.txt
[2026-04-22 07:15:17] -rw-------. 1 boincer umatlas        823 Apr 22 07:15 pilotlog.txt
[2026-04-22 07:15:17] -rw-------. 1 boincer umatlas         95 Apr 22 07:15 pilot_heartbeat.json
[2026-04-22 07:15:17] -rw-------. 1 boincer umatlas    4323403 Apr 22 07:15 log.49820244._014885.job.log.1
[2026-04-22 07:15:17] -rw-------. 1 boincer umatlas        357 Apr 22 07:15 output.list
[2026-04-22 07:15:17] -rw-r--r--. 1 boincer umatlas        410 Apr 22 07:15 runtime_log
[2026-04-22 07:15:17] -rw-------. 1 boincer umatlas    5242880 Apr 22 07:15 result.tar.gz
[2026-04-22 07:15:17] -rw-r--r--. 1 boincer umatlas       8954 Apr 22 07:15 runtime_log.err
[2026-04-22 07:15:17] -rw-------. 1 boincer umatlas        661 Apr 22 07:15 5a49aa51720e.diag
[2026-04-22 07:15:17] -rw-r--r--. 1 boincer umatlas      21347 Apr 22 07:15 stderr.txt
[2026-04-22 07:15:17] HITS file was successfully produced:
[2026-04-22 07:15:18] -rw-------. 1 boincer umatlas 274679615 Apr 22 07:13 shared/HITS.pool.root.1
[2026-04-22 07:15:18]  *** Contents of shared directory: ***
[2026-04-22 07:15:18] total 2462940
[2026-04-22 07:15:18] -rw-r--r--. 2 boincer umatlas 2241440418 Apr 21 14:08 ATLAS.root_0
[2026-04-22 07:15:18] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 14:08 start_atlas.sh
[2026-04-22 07:15:18] -rw-r--r--. 2 boincer umatlas     656926 Apr 21 14:08 input.tar.gz
[2026-04-22 07:15:18] -rw-------. 1 boincer umatlas  274679615 Apr 22 07:13 HITS.pool.root.1
[2026-04-22 07:15:18] -rw-------. 1 boincer umatlas    5242880 Apr 22 07:15 result.tar.gz
07:15:19 (1470030): run_atlas exited; CPU time 90553.150881
07:15:19 (1470030): called boinc_finish(0)

</stderr_txt>
]]>

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