Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:11:59 (481211): wrapper (7.7.26015): starting
14:11:59 (481211): wrapper: running run_atlas (--nthreads 8)
[2026-04-21 14:11:59] Arguments: --nthreads 8
[2026-04-21 14:11:59] Threads: 8
[2026-04-21 14:11:59] Checking for CVMFS
[2026-04-21 14:12:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-21 14:12:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-21 14:12:00] Running cvmfs_config stat atlas.cern.ch
[2026-04-21 14:12:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-21 14:12:01] 2.13.3.0 10955 170134 294668 158699 1 24 39002798 40960000 22732 16776704 0 396147700 99.708 393287199 34447 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-21 14:12:01] CVMFS is ok
[2026-04-21 14:12:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 14:12:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 14:12:01] Further information can be found at the LHC@home message board.
[2026-04-21 14:12:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 14:12:01] Checking for apptainer binary...
[2026-04-21 14:12:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-21 14:12:01] Running /usr/bin/apptainer --version
[2026-04-21 14:12:01] apptainer version 1.4.5-2.el9
[2026-04-21 14:12:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 14:12:02] c-211-33-1.aglt2.org
[2026-04-21 14:12:02] apptainer works
[2026-04-21 14:12:03] Set ATHENA_PROC_NUMBER=8
[2026-04-21 14:12:03] Set ATHENA_CORE_NUMBER=8
[2026-04-21 14:12:03] Starting ATLAS job with PandaID=7105411225
[2026-04-21 14:12:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-21 21:29:43]  *** The last 200 lines of the pilot log: ***
[2026-04-21 21:29:43] 2026-04-22 01:29:10,284 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/4/workernode_map.json
[2026-04-21 21:29:43] 2026-04-22 01:29:10,285 | INFO     | this job has now completed (state=finished)
[2026-04-21 21:29:43] 2026-04-22 01:29:10,285 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-21 21:29:43] 2026-04-22 01:29:10,285 | INFO     | log transfer has been attempted: DONE
[2026-04-21 21:29:43] 2026-04-22 01:29:10,285 | INFO     | job 7105411225 has finished - writing final server update
[2026-04-21 21:29:43] 2026-04-22 01:29:10,286 | INFO     | total number of processed events: 400 (read)
[2026-04-21 21:29:43] 2026-04-22 01:29:10,303 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-7105411225/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 21:29:43] 2026-04-22 01:29:10,304 | INFO     | extracted standard info from prmon json
[2026-04-21 21:29:43] 2026-04-22 01:29:10,304 | INFO     | extracted standard memory fields from prmon json
[2026-04-21 21:29:43] 2026-04-22 01:29:10,305 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-21 21:29:43] 2026-04-22 01:29:10,305 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-21 21:29:43] 2026-04-22 01:29:10,313 | INFO     | fitting pss+swap vs Time
[2026-04-21 21:29:43] 2026-04-22 01:29:10,313 | INFO     | sum of square deviations: 24139766164.112446
[2026-04-21 21:29:43] 2026-04-22 01:29:10,318 | INFO     | sum of deviations: 49772387654.824356
[2026-04-21 21:29:43] 2026-04-22 01:29:10,318 | INFO     | mean x (centered): 0.0
[2026-04-21 21:29:43] 2026-04-22 01:29:10,318 | INFO     | mean y: 2547286.430913349
[2026-04-21 21:29:43] 2026-04-22 01:29:10,318 | INFO     | intersect: 2547286.430913349
[2026-04-21 21:29:43] 2026-04-22 01:29:10,319 | INFO     | chi2: 4.419338921420723
[2026-04-21 21:29:43] 2026-04-22 01:29:10,319 | INFO     | sum of square deviations: 23301680299.76532
[2026-04-21 21:29:43] 2026-04-22 01:29:10,324 | INFO     | sum of deviations: 74986303831.52379
[2026-04-21 21:29:43] 2026-04-22 01:29:10,324 | INFO     | mean x (centered): 0.0
[2026-04-21 21:29:43] 2026-04-22 01:29:10,324 | INFO     | mean y: 2551826.286729858
[2026-04-21 21:29:43] 2026-04-22 01:29:10,324 | INFO     | intersect: 2551826.286729858
[2026-04-21 21:29:43] 2026-04-22 01:29:10,325 | INFO     | chi2: 3.74641037028183
[2026-04-21 21:29:43] 2026-04-22 01:29:10,325 | INFO     | current chi2=3.74641037028183 (change=15.226905270314964 %)
[2026-04-21 21:29:43] 2026-04-22 01:29:10,325 | INFO     | right removable region: 421
[2026-04-21 21:29:43] 2026-04-22 01:29:10,326 | INFO     | sum of square deviations: 23301548844.9858
[2026-04-21 21:29:43] 2026-04-22 01:29:10,330 | INFO     | sum of deviations: -71896134321.92416
[2026-04-21 21:29:43] 2026-04-22 01:29:10,330 | INFO     | mean x (centered): 0.0
[2026-04-21 21:29:43] 2026-04-22 01:29:10,330 | INFO     | mean y: 2569392.085308057
[2026-04-21 21:29:43] 2026-04-22 01:29:10,331 | INFO     | intersect: 2569392.085308057
[2026-04-21 21:29:43] 2026-04-22 01:29:10,331 | INFO     | chi2: 1.4674927573700018
[2026-04-21 21:29:43] 2026-04-22 01:29:10,331 | INFO     | current chi2=1.4674927573700018 (change=66.79383990539847 %)
[2026-04-21 21:29:43] 2026-04-22 01:29:10,332 | INFO     | sum of square deviations: 22482959922.83947
[2026-04-21 21:29:43] 2026-04-22 01:29:10,336 | INFO     | sum of deviations: -106691567015.93286
[2026-04-21 21:29:43] 2026-04-22 01:29:10,336 | INFO     | mean x (centered): 0.0
[2026-04-21 21:29:43] 2026-04-22 01:29:10,336 | INFO     | mean y: 2575857.6091127098
[2026-04-21 21:29:43] 2026-04-22 01:29:10,336 | INFO     | intersect: 2575857.6091127098
[2026-04-21 21:29:43] 2026-04-22 01:29:10,337 | INFO     | chi2: 1.16123108379488
[2026-04-21 21:29:43] 2026-04-22 01:29:10,337 | INFO     | current chi2=1.16123108379488 (change=20.869723004561543 %)
[2026-04-21 21:29:43] 2026-04-22 01:29:10,337 | INFO     | left removable region: 10
[2026-04-21 21:29:43] 2026-04-22 01:29:10,338 | INFO     | sum of square deviations: 21526391958.544933
[2026-04-21 21:29:43] 2026-04-22 01:29:10,342 | INFO     | sum of deviations: -80452457011.40129
[2026-04-21 21:29:43] 2026-04-22 01:29:10,342 | INFO     | mean x (centered): 0.0
[2026-04-21 21:29:43] 2026-04-22 01:29:10,342 | INFO     | mean y: 2580814.2554744524
[2026-04-21 21:29:43] 2026-04-22 01:29:10,342 | INFO     | intersect: 2580814.2554744524
[2026-04-21 21:29:43] 2026-04-22 01:29:10,343 | INFO     | chi2: 0.4655180360238335
[2026-04-21 21:29:43] 2026-04-22 01:29:10,343 | INFO     | current memory leak: -3.74 B/s (using 411 data points, chi2=0.47)
[2026-04-21 21:29:43] 2026-04-22 01:29:10,344 | INFO     | could have reported an average CPU frequency of 2619 MHz (18 samples)
[2026-04-21 21:29:43] 2026-04-22 01:29:10,344 | INFO     | ..............................
[2026-04-21 21:29:43] 2026-04-22 01:29:10,344 | INFO     | . Timing measurements:
[2026-04-21 21:29:43] 2026-04-22 01:29:10,344 | INFO     | . get job = 0 s
[2026-04-21 21:29:43] 2026-04-22 01:29:10,344 | INFO     | . initial setup = 40 s
[2026-04-21 21:29:43] 2026-04-22 01:29:10,344 | INFO     | . payload setup = 47 s
[2026-04-21 21:29:43] 2026-04-22 01:29:10,344 | INFO     | . stage-in = 0 s
[2026-04-21 21:29:43] 2026-04-22 01:29:10,345 | INFO     | . payload execution = 26051 s
[2026-04-21 21:29:43] 2026-04-22 01:29:10,345 | INFO     | . stage-out = 2 s
[2026-04-21 21:29:43] 2026-04-22 01:29:10,345 | INFO     | . log creation = 0 s
[2026-04-21 21:29:43] 2026-04-22 01:29:10,345 | INFO     | ..............................
[2026-04-21 21:29:43] 2026-04-22 01:29:10,681 | INFO     | 
[2026-04-21 21:29:43] 2026-04-22 01:29:10,683 | INFO     | job summary report
[2026-04-21 21:29:43] 2026-04-22 01:29:10,683 | INFO     | --------------------------------------------------
[2026-04-21 21:29:43] 2026-04-22 01:29:10,683 | INFO     | PanDA job id: 7105411225
[2026-04-21 21:29:43] 2026-04-22 01:29:10,683 | INFO     | task id: 49820244
[2026-04-21 21:29:43] 2026-04-22 01:29:10,683 | INFO     | errors: (none)
[2026-04-21 21:29:43] 2026-04-22 01:29:10,683 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-21 21:29:43] 2026-04-22 01:29:10,683 | INFO     | pilot state: finished 
[2026-04-21 21:29:43] 2026-04-22 01:29:10,683 | INFO     | transexitcode: 0
[2026-04-21 21:29:43] 2026-04-22 01:29:10,683 | INFO     | exeerrorcode: 0
[2026-04-21 21:29:43] 2026-04-22 01:29:10,683 | INFO     | exeerrordiag: 
[2026-04-21 21:29:43] 2026-04-22 01:29:10,684 | INFO     | exitcode: 0
[2026-04-21 21:29:43] 2026-04-22 01:29:10,684 | INFO     | exitmsg: OK
[2026-04-21 21:29:43] 2026-04-22 01:29:10,684 | INFO     | cpuconsumptiontime: 76121 s
[2026-04-21 21:29:43] 2026-04-22 01:29:10,684 | INFO     | nevents: 400
[2026-04-21 21:29:43] 2026-04-22 01:29:10,684 | INFO     | neventsw: 0
[2026-04-21 21:29:43] 2026-04-22 01:29:10,684 | INFO     | pid: 492584
[2026-04-21 21:29:43] 2026-04-22 01:29:10,684 | INFO     | pgrp: 492584
[2026-04-21 21:29:43] 2026-04-22 01:29:10,684 | INFO     | corecount: 8
[2026-04-21 21:29:43] 2026-04-22 01:29:10,684 | INFO     | event service: False
[2026-04-21 21:29:43] 2026-04-22 01:29:10,684 | INFO     | sizes: {0: 2273921, 1: 2274606, 2: 2274606, 3: 2276463, 14: 2276463, 26102: 2312623, 26103: 2312750, 26106: 2321804, 26107: 2322054}
[2026-04-21 21:29:43] 2026-04-22 01:29:10,684 | INFO     | --------------------------------------------------
[2026-04-21 21:29:43] 2026-04-22 01:29:10,684 | INFO     | 
[2026-04-21 21:29:43] 2026-04-22 01:29:10,685 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-04-21 21:29:43] 2026-04-22 01:29:10,711 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-21 21:29:43] 2026-04-22 01:29:10,711 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-21 21:29:43] 2026-04-22 01:29:10,711 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-21 21:29:43] 2026-04-22 01:29:10,711 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-21 21:29:43] 2026-04-22 01:29:10,712 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-21 21:29:43] 2026-04-22 01:29:10,712 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-21 21:29:43] 2026-04-22 01:29:10,712 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-21 21:29:43] 2026-04-22 01:29:10,712 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-21 21:29:43] 2026-04-22 01:29:10,712 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-21 21:29:43] 2026-04-22 01:29:10,712 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-21 21:29:43] 2026-04-22 01:29:10,712 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-21 21:29:43] 2026-04-22 01:29:10,712 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-21 21:29:43] 2026-04-22 01:29:10,712 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-21 21:29:43] 2026-04-22 01:29:10,712 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-21 21:29:43] 2026-04-22 01:29:10,712 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-21 21:29:43] 2026-04-22 01:29:10,712 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-21 21:29:43] 2026-04-22 01:29:10,712 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-21 21:29:43] 2026-04-22 01:29:10,713 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-21 21:29:43] 2026-04-22 01:29:10,713 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-21 21:29:43] 2026-04-22 01:29:10,713 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-21 21:29:43] 2026-04-22 01:29:10,713 | INFO     | job 7105411225 has completed (purged errors)
[2026-04-21 21:29:43] 2026-04-22 01:29:10,714 | INFO     | overall cleanup function is called
[2026-04-21 21:29:43] 2026-04-22 01:29:11,004 | INFO     | PID=485655 has CPU usage=12.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-21 21:29:43] 2026-04-22 01:29:11,004 | INFO     | .. there are 13 such processes running
[2026-04-21 21:29:43] 2026-04-22 01:29:11,725 | INFO     | --- collectZombieJob: --- 10, [492584]
[2026-04-21 21:29:43] 2026-04-22 01:29:11,725 | INFO     | zombie collector waiting for pid 492584
[2026-04-21 21:29:43] 2026-04-22 01:29:11,725 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-21 21:29:43] 2026-04-22 01:29:11,725 | INFO     | collected zombie processes
[2026-04-21 21:29:43] 2026-04-22 01:29:11,725 | INFO     | will attempt to kill all subprocesses of pid=492584
[2026-04-21 21:29:43] 2026-04-22 01:29:12,083 | INFO     | process IDs to be killed: [492584] (in reverse order)
[2026-04-21 21:29:43] 2026-04-22 01:29:12,195 | WARNING  | found no corresponding commands to process id(s)
[2026-04-21 21:29:43] 2026-04-22 01:29:12,196 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-21 21:29:43] 2026-04-22 01:29:12,237 | INFO     | did not find any defunct processes belonging to 492584
[2026-04-21 21:29:43] 2026-04-22 01:29:12,276 | INFO     | did not find any defunct processes belonging to 492584
[2026-04-21 21:29:43] 2026-04-22 01:29:12,276 | INFO     | Ready for new job
[2026-04-21 21:29:43] 2026-04-22 01:29:12,279 | INFO     | **************************************
[2026-04-21 21:29:43] 2026-04-22 01:29:12,279 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-21 21:29:43] 2026-04-22 01:29:12,279 | INFO     | **************************************
[2026-04-21 21:29:43] 2026-04-22 01:29:12,279 | INFO     | 
[2026-04-21 21:29:43] 2026-04-22 01:29:12,286 | INFO     | architecture information:
[2026-04-21 21:29:43] 2026-04-22 01:29:12,287 | INFO     | executing command: cat /etc/os-release
[2026-04-21 21:29:43] 2026-04-22 01:29:12,305 | INFO     | cat /etc/os-release:
[2026-04-21 21:29:43] NAME="CentOS Linux"
[2026-04-21 21:29:43] VERSION="7 (Core)"
[2026-04-21 21:29:43] ID="centos"
[2026-04-21 21:29:43] ID_LIKE="rhel fedora"
[2026-04-21 21:29:43] VERSION_ID="7"
[2026-04-21 21:29:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-21 21:29:43] ANSI_COLOR="0;31"
[2026-04-21 21:29:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-21 21:29:43] HOME_URL="https://www.centos.org/"
[2026-04-21 21:29:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-21 21:29:43] 
[2026-04-21 21:29:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-21 21:29:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-21 21:29:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-21 21:29:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-21 21:29:43] 
[2026-04-21 21:29:43] 2026-04-22 01:29:12,306 | INFO     | **************************************
[2026-04-21 21:29:43] 2026-04-22 01:29:12,587 | WARNING  | process 492584 can no longer be monitored (due to stat problems) - aborting
[2026-04-21 21:29:43] 2026-04-22 01:29:12,809 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-04-21 21:29:43] 2026-04-22 01:29:12,829 | INFO     | sufficient remaining disk space (125681270784 B)
[2026-04-21 21:29:43] 2026-04-22 01:29:12,829 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-21 21:29:43] 2026-04-22 01:29:12,830 | INFO     | current server update state: UPDATING_FINAL
[2026-04-21 21:29:43] 2026-04-22 01:29:12,830 | INFO     | update_server=False
[2026-04-21 21:29:43] 2026-04-22 01:29:12,830 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-21 21:29:43] 2026-04-22 01:29:12,884 | INFO     | using path: /tmp/boinchome/slots/4/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 21:29:43] 2026-04-22 01:29:12,940 | INFO     | all job control threads have been joined
[2026-04-21 21:29:43] 2026-04-22 01:29:13,055 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-21 21:29:43] 2026-04-22 01:29:13,212 | INFO     | number of running child processes to parent process 492584: 1
[2026-04-21 21:29:43] 2026-04-22 01:29:13,212 | INFO     | maximum number of monitored processes: 6
[2026-04-21 21:29:43] 2026-04-22 01:29:13,212 | INFO     | aborting job monitoring since job object (job id=7105411225) has expired
[2026-04-21 21:29:43] 2026-04-22 01:29:13,212 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-21 21:29:43] 2026-04-22 01:29:13,212 | INFO     | will abort loop
[2026-04-21 21:29:43] 2026-04-22 01:29:13,834 | INFO     | all data control threads have been joined
[2026-04-21 21:29:43] 2026-04-22 01:29:13,835 | INFO     | [job] retrieve thread has finished
[2026-04-21 21:29:43] 2026-04-22 01:29:13,931 | INFO     | [payload] validate_post thread has finished
[2026-04-21 21:29:43] 2026-04-22 01:29:13,941 | INFO     | [payload] failed_post thread has finished
[2026-04-21 21:29:43] 2026-04-22 01:29:13,945 | INFO     | [job] control thread has finished
[2026-04-21 21:29:43] 2026-04-22 01:29:14,011 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-21 21:29:43] 2026-04-22 01:29:14,095 | INFO     | [data] copytool_in thread has finished
[2026-04-21 21:29:43] 2026-04-22 01:29:14,217 | INFO     | [job] job monitor thread has finished
[2026-04-21 21:29:43] 2026-04-22 01:29:14,250 | INFO     | all payload control threads have been joined
[2026-04-21 21:29:43] 2026-04-22 01:29:14,300 | INFO     | [payload] validate_pre thread has finished
[2026-04-21 21:29:43] 2026-04-22 01:29:14,409 | INFO     | [payload] execute_payloads thread has finished
[2026-04-21 21:29:43] 2026-04-22 01:29:14,418 | INFO     | [job] validate thread has finished
[2026-04-21 21:29:43] 2026-04-22 01:29:14,659 | INFO     | [job] create_data_payload thread has finished
[2026-04-21 21:29:43] 2026-04-22 01:29:14,839 | INFO     | [data] control thread has finished
[2026-04-21 21:29:43] 2026-04-22 01:29:15,061 | INFO     | [data] copytool_out thread has finished
[2026-04-21 21:29:43] 2026-04-22 01:29:15,255 | INFO     | [payload] control thread has finished
[2026-04-21 21:29:43] 2026-04-22 01:29:15,455 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-21 21:29:43] 2026-04-22 01:29:16,288 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-21 21:29:43] 2026-04-22 01:29:16,461 | INFO     | [job] queue monitor thread has finished
[2026-04-21 21:29:43] 2026-04-22 01:29:20,294 | INFO     | [data] queue_monitor thread has finished
[2026-04-21 21:29:43] 2026-04-22 01:29:34,877 | INFO     | [monitor] cgroup control has ended
[2026-04-21 21:29:43] 2026-04-22 01:29:35,516 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140259809212224)>', '<ExcThread(monitor, started 140259455129344)>']
[2026-04-21 21:29:43] 2026-04-22 01:29:40,542 | INFO     | all workflow threads have been joined
[2026-04-21 21:29:43] 2026-04-22 01:29:40,542 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-21 21:29:43] 2026-04-22 01:29:40,543 | INFO     | traces error code: 0
[2026-04-21 21:29:43] 2026-04-22 01:29:40,543 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-21 21:29:43] 2026-04-22 01:29:43,545 | INFO     | PID=485655 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-21 21:29:43] 2026-04-22 01:29:43,546 | INFO     | .. there are 13 such processes running
[2026-04-21 21:29:43] 2026-04-22 01:29:43,548 | INFO     | found 0 job(s) in 20 queues
[2026-04-21 21:29:43] 2026-04-22 01:29:43,548 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-21 21:29:43] 2026-04-22 01:29:43,548 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-21 21:29:43] 2026-04-22 01:29:43,548 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-21 21:29:43] 2026-04-22 01:29:43,549 | INFO     | [monitor] control thread has ended
[2026-04-21 21:29:43] 2026-04-22 01:29:43,754 [wrapper] ==== pilot stdout END ====
[2026-04-21 21:29:43] 2026-04-22 01:29:43,757 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-21 21:29:43] 2026-04-22 01:29:43,761 [wrapper] pilotpid: 485655
[2026-04-21 21:29:43] 2026-04-22 01:29:43,764 [wrapper] Pilot exit status: 0
[2026-04-21 21:29:43] 2026-04-22 01:29:43,777 [wrapper] pandaids: 7105411225
[2026-04-21 21:29:43] 2026-04-22 01:29:43,854 [wrapper] cleanup supervisor_pilot 1246660 485656
[2026-04-21 21:29:43] 2026-04-22 01:29:43,858 [wrapper] Test setup, not cleaning
[2026-04-21 21:29:43] 2026-04-22 01:29:43,862 [wrapper] apfmon messages muted
[2026-04-21 21:29:43] 2026-04-22 01:29:43,865 [wrapper] ==== wrapper stdout END ====
[2026-04-21 21:29:43] 2026-04-22 01:29:43,869 [wrapper] ==== wrapper stderr END ====
[2026-04-21 21:29:43]  *** Error codes and diagnostics ***
[2026-04-21 21:29:43]     "exeErrorCode": 0,
[2026-04-21 21:29:43]     "pilotErrorCode": 0,
[2026-04-21 21:29:43]  *** Listing of results directory ***
[2026-04-21 21:29:43] total 2458336
[2026-04-21 21:29:43] -rwx------. 1 boincer umatlas      36322 Apr 21 07:06 runpilot2-wrapper.sh
[2026-04-21 21:29:43] -rw-r--r--. 1 boincer umatlas     644190 Apr 21 08:32 pilot3.tar.gz
[2026-04-21 21:29:43] -rw-r--r--. 1 boincer umatlas       5094 Apr 21 08:43 queuedata.json
[2026-04-21 21:29:43] -rw-r--r--. 1 boincer umatlas        100 Apr 21 14:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-21 21:29:43] -rwxr-xr-x. 1 boincer umatlas       7986 Apr 21 14:11 run_atlas
[2026-04-21 21:29:43] -rw-r--r--. 1 boincer umatlas        105 Apr 21 14:11 job.xml
[2026-04-21 21:29:43] -rw-r--r--. 2 boincer umatlas 2235290498 Apr 21 14:11 EVNT.49820242._000031.pool.root.1
[2026-04-21 21:29:43] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 14:11 start_atlas.sh
[2026-04-21 21:29:43] drwxrwx--x. 2 boincer umatlas       4096 Apr 21 14:11 shared
[2026-04-21 21:29:43] -rw-r--r--. 2 boincer umatlas     656916 Apr 21 14:11 input.tar.gz
[2026-04-21 21:29:43] -rw-r--r--. 1 boincer umatlas          0 Apr 21 14:11 boinc_lockfile
[2026-04-21 21:29:43] -rw-r--r--. 1 boincer umatlas       2551 Apr 21 14:12 pandaJob.out
[2026-04-21 21:29:43] -rw-------. 1 boincer umatlas         57 Apr 21 14:12 setup.sh.local
[2026-04-21 21:29:43] -rw-------. 1 boincer umatlas     994998 Apr 21 14:13 agis_schedconf.cvmfs.json
[2026-04-21 21:29:43] -rw-------. 1 boincer umatlas        436 Apr 21 14:13 workernode_map.json
[2026-04-21 21:29:43] drwx------. 5 boincer umatlas       4096 Apr 21 14:13 pilot3
[2026-04-21 21:29:43] -rw-r--r--. 1 boincer umatlas       6775 Apr 21 21:22 init_data.xml
[2026-04-21 21:29:43] -rw-------. 1 boincer umatlas  272561368 Apr 21 21:28 HITS.49820244._014822.pool.root.1
[2026-04-21 21:29:43] -rw-r--r--. 1 boincer umatlas        490 Apr 21 21:28 boinc_task_state.xml
[2026-04-21 21:29:43] -rw-------. 1 boincer umatlas       1059 Apr 21 21:29 memory_monitor_summary.json
[2026-04-21 21:29:43] -rw-------. 1 boincer umatlas    1509089 Apr 21 21:29 agis_ddmendpoints.agis.ALL.json
[2026-04-21 21:29:43] -rw-------. 1 boincer umatlas     559850 Apr 21 21:29 log.49820244._014822.job.log.tgz.1
[2026-04-21 21:29:43] -rw-------. 1 boincer umatlas       6441 Apr 21 21:29 heartbeat_new.json
[2026-04-21 21:29:43] -rw-------. 1 boincer umatlas       6332 Apr 21 21:29 heartbeat.json
[2026-04-21 21:29:43] -rw-r--r--. 1 boincer umatlas       8192 Apr 21 21:29 boinc_mmap_file
[2026-04-21 21:29:43] -rw-r--r--. 1 boincer umatlas         28 Apr 21 21:29 wrapper_checkpoint.txt
[2026-04-21 21:29:43] -rw-------. 1 boincer umatlas         95 Apr 21 21:29 pilot_heartbeat.json
[2026-04-21 21:29:43] -rw-------. 1 boincer umatlas        822 Apr 21 21:29 pilotlog.txt
[2026-04-21 21:29:43] -rw-------. 1 boincer umatlas    2152043 Apr 21 21:29 log.49820244._014822.job.log.1
[2026-04-21 21:29:43] -rw-------. 1 boincer umatlas        357 Apr 21 21:29 output.list
[2026-04-21 21:29:43] -rw-r--r--. 1 boincer umatlas        410 Apr 21 21:29 runtime_log
[2026-04-21 21:29:43] -rw-------. 1 boincer umatlas    2734080 Apr 21 21:29 result.tar.gz
[2026-04-21 21:29:43] -rw-r--r--. 1 boincer umatlas       8974 Apr 21 21:29 runtime_log.err
[2026-04-21 21:29:43] -rw-------. 1 boincer umatlas        665 Apr 21 21:29 5a3d6c67dce6.diag
[2026-04-21 21:29:43] -rw-r--r--. 1 boincer umatlas      21346 Apr 21 21:29 stderr.txt
[2026-04-21 21:29:43] HITS file was successfully produced:
[2026-04-21 21:29:43] -rw-------. 1 boincer umatlas 272561368 Apr 21 21:28 shared/HITS.pool.root.1
[2026-04-21 21:29:43]  *** Contents of shared directory: ***
[2026-04-21 21:29:43] total 2452420
[2026-04-21 21:29:43] -rw-r--r--. 2 boincer umatlas 2235290498 Apr 21 14:11 ATLAS.root_0
[2026-04-21 21:29:43] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 14:11 start_atlas.sh
[2026-04-21 21:29:43] -rw-r--r--. 2 boincer umatlas     656916 Apr 21 14:11 input.tar.gz
[2026-04-21 21:29:43] -rw-------. 1 boincer umatlas  272561368 Apr 21 21:28 HITS.pool.root.1
[2026-04-21 21:29:43] -rw-------. 1 boincer umatlas    2734080 Apr 21 21:29 result.tar.gz
21:29:45 (481211): run_atlas exited; CPU time 77092.737594
21:29:45 (481211): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN