Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:46:58 (1623987): wrapper (7.7.26015): starting
22:46:58 (1623987): wrapper: running run_atlas (--nthreads 4)
[2026-04-21 22:46:58] Arguments: --nthreads 4
[2026-04-21 22:46:58] Threads: 4
[2026-04-21 22:46:58] Checking for CVMFS
[2026-04-21 22:46:58] No cvmfs_config command found, will try listing directly
[2026-04-21 22:46:58] CVMFS is ok
[2026-04-21 22:46:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 22:46:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 22:46:58] Further information can be found at the LHC@home message board.
[2026-04-21 22:46:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 22:46:58] Checking for apptainer binary...
[2026-04-21 22:46:58] which: no apptainer in ((null))
[2026-04-21 22:46:58] apptainer is not installed, using version from CVMFS
[2026-04-21 22:46:58] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 22:46:58] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot32/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2026-04-21 22:46:58] apptainer works
[2026-04-21 22:46:58] Set ATHENA_PROC_NUMBER=4
[2026-04-21 22:46:58] Set ATHENA_CORE_NUMBER=4
[2026-04-21 22:46:58] Starting ATLAS job with PandaID=7105411037
[2026-04-21 22:46:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot32/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-22 03:20:18]  *** The last 200 lines of the pilot log: ***
[2026-04-22 03:20:18] 2026-04-22 01:17:53,610 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-22 03:20:18] 2026-04-22 01:17:55,044 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-22 03:20:18] 2026-04-22 01:17:55,130 | INFO     | job 7105411037 has state=finished
[2026-04-22 03:20:18] 2026-04-22 01:17:55,131 | INFO     | preparing for final server update for job 7105411037 in state='finished'
[2026-04-22 03:20:18] 2026-04-22 01:17:55,131 | INFO     | reading metadata from: /var/lib/boinc/var/slot32/slots/1/PanDA_Pilot-7105411037/jobReport.json
[2026-04-22 03:20:18] 2026-04-22 01:17:55,133 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot32/slots/1/workernode_map.json
[2026-04-22 03:20:18] 2026-04-22 01:17:55,134 | INFO     | this job has now completed (state=finished)
[2026-04-22 03:20:18] 2026-04-22 01:17:55,134 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-22 03:20:18] 2026-04-22 01:17:55,134 | INFO     | log transfer has been attempted: DONE
[2026-04-22 03:20:18] 2026-04-22 01:17:55,134 | INFO     | job 7105411037 has finished - writing final server update
[2026-04-22 03:20:18] 2026-04-22 01:17:55,135 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_4189/.job.ad'
[2026-04-22 03:20:18] 2026-04-22 01:17:55,135 | INFO     | total number of processed events: 400 (read)
[2026-04-22 03:20:18] 2026-04-22 01:17:55,147 | INFO     | using path: /var/lib/boinc/var/slot32/slots/1/PanDA_Pilot-7105411037/memory_monitor_summary.json (trf name=prmon)
[2026-04-22 03:20:18] 2026-04-22 01:17:55,148 | INFO     | extracted standard info from prmon json
[2026-04-22 03:20:18] 2026-04-22 01:17:55,148 | INFO     | extracted standard memory fields from prmon json
[2026-04-22 03:20:18] 2026-04-22 01:17:55,148 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-22 03:20:18] 2026-04-22 01:17:55,148 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-22 03:20:18] 2026-04-22 01:17:55,153 | INFO     | fitting pss+swap vs Time
[2026-04-22 03:20:18] 2026-04-22 01:17:55,154 | INFO     | sum of square deviations: 5836025702.5
[2026-04-22 03:20:18] 2026-04-22 01:17:55,156 | INFO     | sum of deviations: 24267135137.500004
[2026-04-22 03:20:18] 2026-04-22 01:17:55,156 | INFO     | mean x (centered): 0.0
[2026-04-22 03:20:18] 2026-04-22 01:17:55,156 | INFO     | mean y: 2379570.387218045
[2026-04-22 03:20:18] 2026-04-22 01:17:55,156 | INFO     | intersect: 2379570.387218045
[2026-04-22 03:20:18] 2026-04-22 01:17:55,156 | INFO     | chi2: 1.3972329903227088
[2026-04-22 03:20:18] 2026-04-22 01:17:55,157 | INFO     | sum of square deviations: 5513070810.0
[2026-04-22 03:20:18] 2026-04-22 01:17:55,159 | INFO     | sum of deviations: 23524191158.000004
[2026-04-22 03:20:18] 2026-04-22 01:17:55,159 | INFO     | mean x (centered): 0.0
[2026-04-22 03:20:18] 2026-04-22 01:17:55,159 | INFO     | mean y: 2379219.796934866
[2026-04-22 03:20:18] 2026-04-22 01:17:55,159 | INFO     | intersect: 2379219.796934866
[2026-04-22 03:20:18] 2026-04-22 01:17:55,160 | INFO     | chi2: 1.3976847468174434
[2026-04-22 03:20:18] 2026-04-22 01:17:55,160 | INFO     | current chi2=1.3976847468174434 (change=-0.03233222360647762 %)
[2026-04-22 03:20:18] 2026-04-22 01:17:55,160 | INFO     | right removable region: 260
[2026-04-22 03:20:18] 2026-04-22 01:17:55,160 | INFO     | sum of square deviations: 5513070810.0
[2026-04-22 03:20:18] 2026-04-22 01:17:55,162 | INFO     | sum of deviations: -10416921870.999994
[2026-04-22 03:20:18] 2026-04-22 01:17:55,162 | INFO     | mean x (centered): 0.0
[2026-04-22 03:20:18] 2026-04-22 01:17:55,162 | INFO     | mean y: 2395787.6781609193
[2026-04-22 03:20:18] 2026-04-22 01:17:55,162 | INFO     | intersect: 2395787.6781609193
[2026-04-22 03:20:18] 2026-04-22 01:17:55,163 | INFO     | chi2: 0.08064754438788951
[2026-04-22 03:20:18] 2026-04-22 01:17:55,163 | INFO     | current chi2=0.08064754438788951 (change=94.22805323475343 %)
[2026-04-22 03:20:18] 2026-04-22 01:17:55,163 | INFO     | sum of square deviations: 5202255680.0
[2026-04-22 03:20:18] 2026-04-22 01:17:55,165 | INFO     | sum of deviations: -8167476568.5
[2026-04-22 03:20:18] 2026-04-22 01:17:55,165 | INFO     | mean x (centered): 0.0
[2026-04-22 03:20:18] 2026-04-22 01:17:55,165 | INFO     | mean y: 2394669.13671875
[2026-04-22 03:20:18] 2026-04-22 01:17:55,165 | INFO     | intersect: 2394669.13671875
[2026-04-22 03:20:18] 2026-04-22 01:17:55,166 | INFO     | chi2: 0.07418365945728671
[2026-04-22 03:20:18] 2026-04-22 01:17:55,166 | INFO     | current chi2=0.07418365945728671 (change=8.01498046798987 %)
[2026-04-22 03:20:18] 2026-04-22 01:17:55,166 | INFO     | left removable region: 10
[2026-04-22 03:20:18] 2026-04-22 01:17:55,167 | INFO     | sum of square deviations: 4844974562.5
[2026-04-22 03:20:18] 2026-04-22 01:17:55,168 | INFO     | sum of deviations: -8323484556.5
[2026-04-22 03:20:18] 2026-04-22 01:17:55,168 | INFO     | mean x (centered): 0.0
[2026-04-22 03:20:18] 2026-04-22 01:17:55,168 | INFO     | mean y: 2394589.452
[2026-04-22 03:20:18] 2026-04-22 01:17:55,169 | INFO     | intersect: 2394589.452
[2026-04-22 03:20:18] 2026-04-22 01:17:55,169 | INFO     | chi2: 0.07387479156128375
[2026-04-22 03:20:18] 2026-04-22 01:17:55,169 | INFO     | current memory leak: -1.72 B/s (using 250 data points, chi2=0.07)
[2026-04-22 03:20:18] 2026-04-22 01:17:55,170 | INFO     | could have reported an average CPU frequency of 2861 MHz (12 samples)
[2026-04-22 03:20:18] 2026-04-22 01:17:55,170 | INFO     | ..............................
[2026-04-22 03:20:18] 2026-04-22 01:17:55,170 | INFO     | . Timing measurements:
[2026-04-22 03:20:18] 2026-04-22 01:17:55,170 | INFO     | . get job = 0 s
[2026-04-22 03:20:18] 2026-04-22 01:17:55,170 | INFO     | . initial setup = 6 s
[2026-04-22 03:20:18] 2026-04-22 01:17:55,170 | INFO     | . payload setup = 10 s
[2026-04-22 03:20:18] 2026-04-22 01:17:55,170 | INFO     | . stage-in = 0 s
[2026-04-22 03:20:18] 2026-04-22 01:17:55,170 | INFO     | . payload execution = 16209 s
[2026-04-22 03:20:18] 2026-04-22 01:17:55,170 | INFO     | . stage-out = 0 s
[2026-04-22 03:20:18] 2026-04-22 01:17:55,171 | INFO     | . log creation = 0 s
[2026-04-22 03:20:18] 2026-04-22 01:17:55,171 | INFO     | ..............................
[2026-04-22 03:20:18] 2026-04-22 01:17:55,691 | INFO     | 
[2026-04-22 03:20:18] 2026-04-22 01:17:55,691 | INFO     | job summary report
[2026-04-22 03:20:18] 2026-04-22 01:17:55,692 | INFO     | --------------------------------------------------
[2026-04-22 03:20:18] 2026-04-22 01:17:55,692 | INFO     | PanDA job id: 7105411037
[2026-04-22 03:20:18] 2026-04-22 01:17:55,692 | INFO     | task id: 49820244
[2026-04-22 03:20:18] 2026-04-22 01:17:55,692 | INFO     | errors: (none)
[2026-04-22 03:20:18] 2026-04-22 01:17:55,692 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-22 03:20:18] 2026-04-22 01:17:55,692 | INFO     | pilot state: finished 
[2026-04-22 03:20:18] 2026-04-22 01:17:55,692 | INFO     | transexitcode: 0
[2026-04-22 03:20:18] 2026-04-22 01:17:55,692 | INFO     | exeerrorcode: 0
[2026-04-22 03:20:18] 2026-04-22 01:17:55,692 | INFO     | exeerrordiag: 
[2026-04-22 03:20:18] 2026-04-22 01:17:55,692 | INFO     | exitcode: 0
[2026-04-22 03:20:18] 2026-04-22 01:17:55,692 | INFO     | exitmsg: OK
[2026-04-22 03:20:18] 2026-04-22 01:17:55,692 | INFO     | cpuconsumptiontime: 62931 s
[2026-04-22 03:20:18] 2026-04-22 01:17:55,693 | INFO     | nevents: 400
[2026-04-22 03:20:18] 2026-04-22 01:17:55,693 | INFO     | neventsw: 0
[2026-04-22 03:20:18] 2026-04-22 01:17:55,693 | INFO     | pid: 1632735
[2026-04-22 03:20:18] 2026-04-22 01:17:55,693 | INFO     | pgrp: 1632735
[2026-04-22 03:20:18] 2026-04-22 01:17:55,693 | INFO     | corecount: 4
[2026-04-22 03:20:18] 2026-04-22 01:17:55,693 | INFO     | event service: False
[2026-04-22 03:20:18] 2026-04-22 01:17:55,693 | INFO     | sizes: {0: 2274589, 1: 2276418, 12: 2276418, 16223: 2307750, 16225: 2316770, 16228: 2317148}
[2026-04-22 03:20:18] 2026-04-22 01:17:55,693 | INFO     | --------------------------------------------------
[2026-04-22 03:20:18] 2026-04-22 01:17:55,693 | INFO     | 
[2026-04-22 03:20:18] 2026-04-22 01:17:55,693 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot32/slots/1
[2026-04-22 03:20:18] 2026-04-22 01:17:55,711 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-22 03:20:18] 2026-04-22 01:17:55,711 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-22 03:20:18] 2026-04-22 01:17:55,711 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-22 03:20:18] 2026-04-22 01:17:55,711 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-22 03:20:18] 2026-04-22 01:17:55,711 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-22 03:20:18] 2026-04-22 01:17:55,711 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-22 03:20:18] 2026-04-22 01:17:55,711 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-22 03:20:18] 2026-04-22 01:17:55,712 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-22 03:20:18] 2026-04-22 01:17:55,712 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-22 03:20:18] 2026-04-22 01:17:55,712 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-22 03:20:18] 2026-04-22 01:17:55,712 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-22 03:20:18] 2026-04-22 01:17:55,712 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-22 03:20:18] 2026-04-22 01:17:55,712 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-22 03:20:18] 2026-04-22 01:17:55,712 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-22 03:20:18] 2026-04-22 01:17:55,712 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-22 03:20:18] 2026-04-22 01:17:55,712 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-22 03:20:18] 2026-04-22 01:17:55,712 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-22 03:20:18] 2026-04-22 01:17:55,712 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-22 03:20:18] 2026-04-22 01:17:55,713 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-22 03:20:18] 2026-04-22 01:17:55,713 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-22 03:20:18] 2026-04-22 01:17:55,713 | INFO     | job 7105411037 has completed (purged errors)
[2026-04-22 03:20:18] 2026-04-22 01:17:55,713 | INFO     | overall cleanup function is called
[2026-04-22 03:20:18] 2026-04-22 01:17:56,722 | INFO     | --- collectZombieJob: --- 10, [1632735]
[2026-04-22 03:20:18] 2026-04-22 01:17:56,722 | INFO     | zombie collector waiting for pid 1632735
[2026-04-22 03:20:18] 2026-04-22 01:17:56,722 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-22 03:20:18] 2026-04-22 01:17:56,722 | INFO     | collected zombie processes
[2026-04-22 03:20:18] 2026-04-22 01:17:56,722 | INFO     | will attempt to kill all subprocesses of pid=1632735
[2026-04-22 03:20:18] 2026-04-22 01:17:56,917 | INFO     | process IDs to be killed: [1632735] (in reverse order)
[2026-04-22 03:20:18] 2026-04-22 01:17:56,992 | WARNING  | found no corresponding commands to process id(s)
[2026-04-22 03:20:18] 2026-04-22 01:17:56,992 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-22 03:20:18] 2026-04-22 01:17:57,000 | INFO     | did not find any defunct processes belonging to 1632735
[2026-04-22 03:20:18] 2026-04-22 01:17:57,007 | INFO     | did not find any defunct processes belonging to 1632735
[2026-04-22 03:20:18] 2026-04-22 01:17:57,007 | INFO     | Ready for new job
[2026-04-22 03:20:18] 2026-04-22 01:17:57,009 | INFO     | **************************************
[2026-04-22 03:20:18] 2026-04-22 01:17:57,009 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-22 03:20:18] 2026-04-22 01:17:57,009 | INFO     | **************************************
[2026-04-22 03:20:18] 2026-04-22 01:17:57,009 | INFO     | 
[2026-04-22 03:20:18] 2026-04-22 01:17:57,012 | INFO     | architecture information:
[2026-04-22 03:20:18] 2026-04-22 01:17:57,012 | INFO     | executing command: cat /etc/os-release
[2026-04-22 03:20:18] 2026-04-22 01:17:57,022 | INFO     | cat /etc/os-release:
[2026-04-22 03:20:18] NAME="CentOS Linux"
[2026-04-22 03:20:18] VERSION="7 (Core)"
[2026-04-22 03:20:18] ID="centos"
[2026-04-22 03:20:18] ID_LIKE="rhel fedora"
[2026-04-22 03:20:18] VERSION_ID="7"
[2026-04-22 03:20:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-22 03:20:18] ANSI_COLOR="0;31"
[2026-04-22 03:20:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-22 03:20:18] HOME_URL="https://www.centos.org/"
[2026-04-22 03:20:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-22 03:20:18] 
[2026-04-22 03:20:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-22 03:20:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-22 03:20:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-22 03:20:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-22 03:20:18] 
[2026-04-22 03:20:18] 2026-04-22 01:17:57,022 | INFO     | **************************************
[2026-04-22 03:20:18] 2026-04-22 01:17:57,525 | INFO     | executing command: df -mP /var/lib/boinc/var/slot32/slots/1
[2026-04-22 03:20:18] 2026-04-22 01:17:57,537 | INFO     | sufficient remaining disk space (52042924032 B)
[2026-04-22 03:20:18] 2026-04-22 01:17:57,537 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-22 03:20:18] 2026-04-22 01:17:57,538 | INFO     | current server update state: UPDATING_FINAL
[2026-04-22 03:20:18] 2026-04-22 01:17:57,538 | INFO     | update_server=False
[2026-04-22 03:20:18] 2026-04-22 01:17:57,538 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-22 03:20:18] 2026-04-22 01:17:57,538 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-22 03:20:18] 2026-04-22 01:17:57,538 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-22 03:20:18] 2026-04-22 01:17:57,539 | INFO     | aborting loop
[2026-04-22 03:20:18] 2026-04-22 01:17:57,620 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-22 03:20:18] 2026-04-22 01:17:57,653 | INFO     | all job control threads have been joined
[2026-04-22 03:20:18] 2026-04-22 01:17:57,825 | INFO     | all payload control threads have been joined
[2026-04-22 03:20:18] 2026-04-22 01:17:58,436 | INFO     | all data control threads have been joined
[2026-04-22 03:20:18] 2026-04-22 01:17:58,542 | INFO     | [job] job monitor thread has finished
[2026-04-22 03:20:18] 2026-04-22 01:17:58,543 | INFO     | [job] retrieve thread has finished
[2026-04-22 03:20:18] 2026-04-22 01:17:58,657 | INFO     | [job] control thread has finished
[2026-04-22 03:20:18] 2026-04-22 01:17:58,831 | INFO     | [payload] control thread has finished
[2026-04-22 03:20:18] 2026-04-22 01:17:58,918 | INFO     | [payload] validate_pre thread has finished
[2026-04-22 03:20:18] 2026-04-22 01:17:59,062 | INFO     | [payload] validate_post thread has finished
[2026-04-22 03:20:18] 2026-04-22 01:17:59,177 | INFO     | [job] create_data_payload thread has finished
[2026-04-22 03:20:18] 2026-04-22 01:17:59,441 | INFO     | [data] control thread has finished
[2026-04-22 03:20:18] 2026-04-22 01:17:59,548 | INFO     | [payload] failed_post thread has finished
[2026-04-22 03:20:18] 2026-04-22 01:17:59,610 | INFO     | [data] copytool_in thread has finished
[2026-04-22 03:20:18] 2026-04-22 01:17:59,626 | INFO     | [data] copytool_out thread has finished
[2026-04-22 03:20:18] 2026-04-22 01:18:00,002 | INFO     | [payload] execute_payloads thread has finished
[2026-04-22 03:20:18] 2026-04-22 01:18:00,003 | INFO     | [job] validate thread has finished
[2026-04-22 03:20:18] 2026-04-22 01:18:00,276 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-22 03:20:18] 2026-04-22 01:18:01,282 | INFO     | [job] queue monitor thread has finished
[2026-04-22 03:20:18] 2026-04-22 01:18:01,544 | INFO     | [data] queue_monitor thread has finished
[2026-04-22 03:20:18] 2026-04-22 01:18:07,838 | INFO     | job.realtimelogging is not enabled
[2026-04-22 03:20:18] 2026-04-22 01:18:08,844 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-22 03:20:18] 2026-04-22 01:18:27,193 | INFO     | PID=1627876 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-22 03:20:18] 2026-04-22 01:18:27,193 | INFO     | .. there are 4 such processes running
[2026-04-22 03:20:18] 2026-04-22 01:18:27,193 | INFO     | found 0 job(s) in 20 queues
[2026-04-22 03:20:18] 2026-04-22 01:18:27,193 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-22 03:20:18] 2026-04-22 01:18:27,194 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-22 03:20:18] 2026-04-22 01:18:39,076 | INFO     | [monitor] cgroup control has ended
[2026-04-22 03:20:18] 2026-04-22 01:18:39,308 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22597537224512)>', '<ExcThread(monitor, started 22597228025600)>']
[2026-04-22 03:20:18] 2026-04-22 01:18:40,248 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-22 03:20:18] 2026-04-22 01:18:40,249 | INFO     | [monitor] control thread has ended
[2026-04-22 03:20:18] 2026-04-22 01:18:44,333 | INFO     | all workflow threads have been joined
[2026-04-22 03:20:18] 2026-04-22 01:18:44,334 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-22 03:20:18] 2026-04-22 01:18:44,334 | INFO     | traces error code: 0
[2026-04-22 03:20:18] 2026-04-22 01:18:44,334 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-22 03:20:18] 2026-04-22 01:18:44,471 [wrapper] ==== pilot stdout END ====
[2026-04-22 03:20:18] 2026-04-22 01:18:44,473 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-22 03:20:18] 2026-04-22 01:18:44,475 [wrapper] pilotpid: 1627876
[2026-04-22 03:20:18] 2026-04-22 01:18:44,477 [wrapper] Pilot exit status: 0
[2026-04-22 03:20:18] 2026-04-22 01:18:44,484 [wrapper] pandaids: 7105411037
[2026-04-22 03:20:18] 2026-04-22 01:18:44,534 [wrapper] cleanup supervisor_pilot 1840105 1627877
[2026-04-22 03:20:18] 2026-04-22 01:18:44,537 [wrapper] Test setup, not cleaning
[2026-04-22 03:20:18] 2026-04-22 01:18:44,539 [wrapper] apfmon messages muted
[2026-04-22 03:20:18] 2026-04-22 01:18:44,541 [wrapper] ==== wrapper stdout END ====
[2026-04-22 03:20:18] 2026-04-22 01:18:44,543 [wrapper] ==== wrapper stderr END ====
[2026-04-22 03:20:18]  *** Error codes and diagnostics ***
[2026-04-22 03:20:18]     "exeErrorCode": 0,
[2026-04-22 03:20:18]     "pilotErrorCode": 0,
[2026-04-22 03:20:18]  *** Listing of results directory ***
[2026-04-22 03:20:18] total 2461788
[2026-04-22 03:20:18] -rwx------. 1 boinc boinc      36322 Apr 21 13:06 runpilot2-wrapper.sh
[2026-04-22 03:20:18] -rw-r--r--. 1 boinc boinc     644190 Apr 21 14:32 pilot3.tar.gz
[2026-04-22 03:20:18] -rw-r--r--. 1 boinc boinc       5094 Apr 21 14:43 queuedata.json
[2026-04-22 03:20:18] -rw-r--r--. 1 boinc boinc        100 Apr 21 21:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-22 03:20:18] -rwxr-xr-x. 1 boinc boinc       7986 Apr 21 21:50 run_atlas
[2026-04-22 03:20:18] -rw-r--r--. 1 boinc boinc        105 Apr 21 21:50 job.xml
[2026-04-22 03:20:18] -rw-r--r--. 2 boinc boinc 2240811311 Apr 21 22:46 EVNT.49820242._000034.pool.root.1
[2026-04-22 03:20:18] -rw-r--r--. 1 boinc boinc       6480 Apr 21 22:46 init_data.xml
[2026-04-22 03:20:18] -rw-r--r--. 2 boinc boinc      15665 Apr 21 22:46 start_atlas.sh
[2026-04-22 03:20:18] drwxrwx--x. 2 boinc boinc       4096 Apr 21 22:46 shared
[2026-04-22 03:20:18] -rw-r--r--. 2 boinc boinc     656923 Apr 21 22:46 input.tar.gz
[2026-04-22 03:20:18] -rw-r--r--. 1 boinc boinc          0 Apr 21 22:46 boinc_lockfile
[2026-04-22 03:20:18] -rw-r--r--. 1 boinc boinc       2551 Apr 21 22:46 pandaJob.out
[2026-04-22 03:20:18] -rw-------. 1 boinc boinc     997082 Apr 21 22:47 agis_schedconf.cvmfs.json
[2026-04-22 03:20:18] -rw-------. 1 boinc boinc        452 Apr 21 22:47 workernode_map.json
[2026-04-22 03:20:18] drwx------. 5 boinc boinc       4096 Apr 21 22:47 pilot3
[2026-04-22 03:20:18] -rw-------. 1 boinc boinc  272185283 Apr 22 03:17 HITS.49820244._014806.pool.root.1
[2026-04-22 03:20:18] -rw-r--r--. 1 boinc boinc        487 Apr 22 03:17 boinc_task_state.xml
[2026-04-22 03:20:18] -rw-------. 1 boinc boinc       1034 Apr 22 03:17 memory_monitor_summary.json
[2026-04-22 03:20:18] -rw-------. 1 boinc boinc    1509089 Apr 22 03:17 agis_ddmendpoints.agis.ALL.json
[2026-04-22 03:20:18] -rw-------. 1 boinc boinc     409225 Apr 22 03:17 log.49820244._014806.job.log.tgz.1
[2026-04-22 03:20:18] -rw-------. 1 boinc boinc       6424 Apr 22 03:17 heartbeat_new.json
[2026-04-22 03:20:18] -rw-------. 1 boinc boinc       6315 Apr 22 03:17 heartbeat.json
[2026-04-22 03:20:18] -rw-------. 1 boinc boinc         95 Apr 22 03:18 pilot_heartbeat.json
[2026-04-22 03:20:18] -rw-------. 1 boinc boinc       4899 Apr 22 03:18 pilotlog.txt
[2026-04-22 03:20:18] -rw-------. 1 boinc boinc    1501932 Apr 22 03:18 log.49820244._014806.job.log.1
[2026-04-22 03:20:18] -rw-------. 1 boinc boinc        357 Apr 22 03:18 output.list
[2026-04-22 03:20:18] -rw-r--r--. 1 boinc boinc        410 Apr 22 03:18 runtime_log
[2026-04-22 03:20:18] -rw-------. 1 boinc boinc    1925120 Apr 22 03:18 result.tar.gz
[2026-04-22 03:20:18] -rw-r--r--. 1 boinc boinc       8827 Apr 22 03:18 runtime_log.err
[2026-04-22 03:20:18] -rw-------. 1 boinc boinc        664 Apr 22 03:18 5a3db4528b4a.diag
[2026-04-22 03:20:18] -rw-r--r--. 1 boinc boinc         26 Apr 22 03:20 wrapper_checkpoint.txt
[2026-04-22 03:20:18] -rw-r--r--. 1 boinc boinc       8192 Apr 22 03:20 boinc_mmap_file
[2026-04-22 03:20:18] -rw-r--r--. 1 boinc boinc      21039 Apr 22 03:20 stderr.txt
[2026-04-22 03:20:18] HITS file was successfully produced:
[2026-04-22 03:20:18] -rw-------. 1 boinc boinc 272185283 Apr 22 03:17 shared/HITS.pool.root.1
[2026-04-22 03:20:18]  *** Contents of shared directory: ***
[2026-04-22 03:20:18] total 2456652
[2026-04-22 03:20:18] -rw-r--r--. 2 boinc boinc 2240811311 Apr 21 22:46 ATLAS.root_0
[2026-04-22 03:20:18] -rw-r--r--. 2 boinc boinc      15665 Apr 21 22:46 start_atlas.sh
[2026-04-22 03:20:18] -rw-r--r--. 2 boinc boinc     656923 Apr 21 22:46 input.tar.gz
[2026-04-22 03:20:18] -rw-------. 1 boinc boinc  272185283 Apr 22 03:17 HITS.pool.root.1
[2026-04-22 03:20:18] -rw-------. 1 boinc boinc    1925120 Apr 22 03:18 result.tar.gz
03:20:20 (1623987): run_atlas exited; CPU time 63654.369752
03:20:20 (1623987): called boinc_finish(0)

</stderr_txt>
]]>

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