Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:05:17 (925623): wrapper (7.7.26015): starting
14:05:17 (925623): wrapper: running run_atlas (--nthreads 8)
[2026-04-21 14:05:17] Arguments: --nthreads 8
[2026-04-21 14:05:17] Threads: 8
[2026-04-21 14:05:17] Checking for CVMFS
[2026-04-21 14:05:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-21 14:05:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-21 14:05:17] Running cvmfs_config stat atlas.cern.ch
[2026-04-21 14:05:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-21 14:05:17] 2.13.3.0 245921 126618 138384 158699 3 165 32899139 40960001 18000 16776704 0 318598000 99.796 169008703 39867 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-21 14:05:17] CVMFS is ok
[2026-04-21 14:05:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 14:05:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 14:05:17] Further information can be found at the LHC@home message board.
[2026-04-21 14:05:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 14:05:17] Checking for apptainer binary...
[2026-04-21 14:05:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-21 14:05:17] Running /usr/bin/apptainer --version
[2026-04-21 14:05:17] apptainer version 1.4.5-2.el9
[2026-04-21 14:05:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 14:05:17] c-212-12.aglt2.org
[2026-04-21 14:05:17] apptainer works
[2026-04-21 14:05:17] Set ATHENA_PROC_NUMBER=8
[2026-04-21 14:05:17] Set ATHENA_CORE_NUMBER=8
[2026-04-21 14:05:17] Starting ATLAS job with PandaID=7105411025
[2026-04-21 14:05:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-21 18:37:10]  *** The last 200 lines of the pilot log: ***
[2026-04-21 18:37:10] 2026-04-21 22:36:05,534 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/4/workernode_map.json
[2026-04-21 18:37:10] 2026-04-21 22:36:05,534 | INFO     | this job has now completed (state=finished)
[2026-04-21 18:37:10] 2026-04-21 22:36:05,534 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-21 18:37:10] 2026-04-21 22:36:05,535 | INFO     | log transfer has been attempted: DONE
[2026-04-21 18:37:10] 2026-04-21 22:36:05,535 | INFO     | job 7105411025 has finished - writing final server update
[2026-04-21 18:37:10] 2026-04-21 22:36:05,535 | INFO     | total number of processed events: 400 (read)
[2026-04-21 18:37:10] 2026-04-21 22:36:05,550 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-7105411025/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 18:37:10] 2026-04-21 22:36:05,551 | INFO     | extracted standard info from prmon json
[2026-04-21 18:37:10] 2026-04-21 22:36:05,551 | INFO     | extracted standard memory fields from prmon json
[2026-04-21 18:37:10] 2026-04-21 22:36:05,552 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-21 18:37:10] 2026-04-21 22:36:05,552 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-21 18:37:10] 2026-04-21 22:36:05,556 | INFO     | fitting pss+swap vs Time
[2026-04-21 18:37:10] 2026-04-21 22:36:05,557 | INFO     | sum of square deviations: 5835979836.3646755
[2026-04-21 18:37:10] 2026-04-21 22:36:05,559 | INFO     | sum of deviations: 41808753116.244354
[2026-04-21 18:37:10] 2026-04-21 22:36:05,559 | INFO     | mean x (centered): 0.0
[2026-04-21 18:37:10] 2026-04-21 22:36:05,559 | INFO     | mean y: 2526318.8759398498
[2026-04-21 18:37:10] 2026-04-21 22:36:05,559 | INFO     | intersect: 2526318.8759398498
[2026-04-21 18:37:10] 2026-04-21 22:36:05,559 | INFO     | chi2: 2.322191007222526
[2026-04-21 18:37:10] 2026-04-21 22:36:05,560 | INFO     | sum of square deviations: 5513026773.862048
[2026-04-21 18:37:10] 2026-04-21 22:36:05,561 | INFO     | sum of deviations: 57909994619.81605
[2026-04-21 18:37:10] 2026-04-21 22:36:05,562 | INFO     | mean x (centered): 0.0
[2026-04-21 18:37:10] 2026-04-21 22:36:05,562 | INFO     | mean y: 2533799.030651341
[2026-04-21 18:37:10] 2026-04-21 22:36:05,562 | INFO     | intersect: 2533799.030651341
[2026-04-21 18:37:10] 2026-04-21 22:36:05,562 | INFO     | chi2: 1.6244422788433044
[2026-04-21 18:37:10] 2026-04-21 22:36:05,563 | INFO     | current chi2=1.6244422788433044 (change=30.046999846656412 %)
[2026-04-21 18:37:10] 2026-04-21 22:36:05,563 | INFO     | sum of square deviations: 5202213473.859375
[2026-04-21 18:37:10] 2026-04-21 22:36:05,564 | INFO     | sum of deviations: 56683191912.8125
[2026-04-21 18:37:10] 2026-04-21 22:36:05,564 | INFO     | mean x (centered): 0.0
[2026-04-21 18:37:10] 2026-04-21 22:36:05,564 | INFO     | mean y: 2533197.03125
[2026-04-21 18:37:10] 2026-04-21 22:36:05,564 | INFO     | intersect: 2533197.03125
[2026-04-21 18:37:10] 2026-04-21 22:36:05,565 | INFO     | chi2: 1.6245476730008008
[2026-04-21 18:37:10] 2026-04-21 22:36:05,565 | INFO     | current chi2=1.6245476730008008 (change=-0.006488021080779051 %)
[2026-04-21 18:37:10] 2026-04-21 22:36:05,565 | INFO     | right removable region: 255
[2026-04-21 18:37:10] 2026-04-21 22:36:05,565 | INFO     | sum of square deviations: 5513023113.862048
[2026-04-21 18:37:10] 2026-04-21 22:36:05,567 | INFO     | sum of deviations: -1660134910.8850536
[2026-04-21 18:37:10] 2026-04-21 22:36:05,567 | INFO     | mean x (centered): 0.0
[2026-04-21 18:37:10] 2026-04-21 22:36:05,567 | INFO     | mean y: 2546705.6475095786
[2026-04-21 18:37:10] 2026-04-21 22:36:05,567 | INFO     | intersect: 2546705.6475095786
[2026-04-21 18:37:10] 2026-04-21 22:36:05,567 | INFO     | chi2: 0.9367969856430715
[2026-04-21 18:37:10] 2026-04-21 22:36:05,567 | INFO     | current chi2=0.9367969856430715 (change=59.658917688965886 %)
[2026-04-21 18:37:10] 2026-04-21 22:36:05,567 | INFO     | sum of square deviations: 5202206153.859375
[2026-04-21 18:37:10] 2026-04-21 22:36:05,569 | INFO     | sum of deviations: -16056238362.054688
[2026-04-21 18:37:10] 2026-04-21 22:36:05,569 | INFO     | mean x (centered): 0.0
[2026-04-21 18:37:10] 2026-04-21 22:36:05,569 | INFO     | mean y: 2553785.92578125
[2026-04-21 18:37:10] 2026-04-21 22:36:05,569 | INFO     | intersect: 2553785.92578125
[2026-04-21 18:37:10] 2026-04-21 22:36:05,569 | INFO     | chi2: 0.8255897269790847
[2026-04-21 18:37:10] 2026-04-21 22:36:05,569 | INFO     | current chi2=0.8255897269790847 (change=11.871009446902486 %)
[2026-04-21 18:37:10] 2026-04-21 22:36:05,569 | INFO     | left removable region: 10
[2026-04-21 18:37:10] 2026-04-21 22:36:05,570 | INFO     | sum of square deviations: 4560002789.853085
[2026-04-21 18:37:10] 2026-04-21 22:36:05,571 | INFO     | sum of deviations: 407437378.4816341
[2026-04-21 18:37:10] 2026-04-21 22:36:05,571 | INFO     | mean x (centered): 0.0
[2026-04-21 18:37:10] 2026-04-21 22:36:05,571 | INFO     | mean y: 2562050.2530612247
[2026-04-21 18:37:10] 2026-04-21 22:36:05,571 | INFO     | intersect: 2562050.2530612247
[2026-04-21 18:37:10] 2026-04-21 22:36:05,571 | INFO     | chi2: 0.11685575648875618
[2026-04-21 18:37:10] 2026-04-21 22:36:05,571 | INFO     | current memory leak: 0.09 B/s (using 245 data points, chi2=0.12)
[2026-04-21 18:37:10] 2026-04-21 22:36:05,572 | INFO     | could have reported an average CPU frequency of 3162 MHz (12 samples)
[2026-04-21 18:37:10] 2026-04-21 22:36:05,572 | INFO     | ..............................
[2026-04-21 18:37:10] 2026-04-21 22:36:05,572 | INFO     | . Timing measurements:
[2026-04-21 18:37:10] 2026-04-21 22:36:05,572 | INFO     | . get job = 0 s
[2026-04-21 18:37:10] 2026-04-21 22:36:05,572 | INFO     | . initial setup = 7 s
[2026-04-21 18:37:10] 2026-04-21 22:36:05,573 | INFO     | . payload setup = 10 s
[2026-04-21 18:37:10] 2026-04-21 22:36:05,573 | INFO     | . stage-in = 0 s
[2026-04-21 18:37:10] 2026-04-21 22:36:05,573 | INFO     | . payload execution = 16196 s
[2026-04-21 18:37:10] 2026-04-21 22:36:05,573 | INFO     | . stage-out = 4 s
[2026-04-21 18:37:10] 2026-04-21 22:36:05,573 | INFO     | . log creation = 0 s
[2026-04-21 18:37:10] 2026-04-21 22:36:05,573 | INFO     | ..............................
[2026-04-21 18:37:10] 2026-04-21 22:36:05,644 | INFO     | 
[2026-04-21 18:37:10] 2026-04-21 22:36:05,668 | INFO     | job summary report
[2026-04-21 18:37:10] 2026-04-21 22:36:05,668 | INFO     | --------------------------------------------------
[2026-04-21 18:37:10] 2026-04-21 22:36:05,669 | INFO     | PanDA job id: 7105411025
[2026-04-21 18:37:10] 2026-04-21 22:36:05,669 | INFO     | task id: 49820244
[2026-04-21 18:37:10] 2026-04-21 22:36:05,669 | INFO     | errors: (none)
[2026-04-21 18:37:10] 2026-04-21 22:36:05,669 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-21 18:37:10] 2026-04-21 22:36:05,669 | INFO     | pilot state: finished 
[2026-04-21 18:37:10] 2026-04-21 22:36:05,669 | INFO     | transexitcode: 0
[2026-04-21 18:37:10] 2026-04-21 22:36:05,669 | INFO     | exeerrorcode: 0
[2026-04-21 18:37:10] 2026-04-21 22:36:05,669 | INFO     | exeerrordiag: 
[2026-04-21 18:37:10] 2026-04-21 22:36:05,669 | INFO     | exitcode: 0
[2026-04-21 18:37:10] 2026-04-21 22:36:05,669 | INFO     | exitmsg: OK
[2026-04-21 18:37:10] 2026-04-21 22:36:05,669 | INFO     | cpuconsumptiontime: 58557 s
[2026-04-21 18:37:10] 2026-04-21 22:36:05,669 | INFO     | nevents: 400
[2026-04-21 18:37:10] 2026-04-21 22:36:05,670 | INFO     | neventsw: 0
[2026-04-21 18:37:10] 2026-04-21 22:36:05,670 | INFO     | pid: 933854
[2026-04-21 18:37:10] 2026-04-21 22:36:05,670 | INFO     | pgrp: 933854
[2026-04-21 18:37:10] 2026-04-21 22:36:05,670 | INFO     | corecount: 8
[2026-04-21 18:37:10] 2026-04-21 22:36:05,670 | INFO     | event service: False
[2026-04-21 18:37:10] 2026-04-21 22:36:05,670 | INFO     | sizes: {0: 2276379, 11: 2276379, 16211: 2308186, 16217: 2317184, 16218: 2317240, 16219: 2317434}
[2026-04-21 18:37:10] 2026-04-21 22:36:05,670 | INFO     | --------------------------------------------------
[2026-04-21 18:37:10] 2026-04-21 22:36:05,670 | INFO     | 
[2026-04-21 18:37:10] 2026-04-21 22:36:05,670 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-04-21 18:37:10] 2026-04-21 22:36:05,725 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-21 18:37:10] 2026-04-21 22:36:05,725 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-21 18:37:10] 2026-04-21 22:36:05,725 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-21 18:37:10] 2026-04-21 22:36:05,725 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-21 18:37:10] 2026-04-21 22:36:05,726 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-21 18:37:10] 2026-04-21 22:36:05,726 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-21 18:37:10] 2026-04-21 22:36:05,726 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-21 18:37:10] 2026-04-21 22:36:05,726 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-21 18:37:10] 2026-04-21 22:36:05,726 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-21 18:37:10] 2026-04-21 22:36:05,726 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-21 18:37:10] 2026-04-21 22:36:05,726 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-21 18:37:10] 2026-04-21 22:36:05,726 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-21 18:37:10] 2026-04-21 22:36:05,726 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-21 18:37:10] 2026-04-21 22:36:05,726 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-21 18:37:10] 2026-04-21 22:36:05,726 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-21 18:37:10] 2026-04-21 22:36:05,726 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-21 18:37:10] 2026-04-21 22:36:05,726 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-21 18:37:10] 2026-04-21 22:36:05,727 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-21 18:37:10] 2026-04-21 22:36:05,727 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-21 18:37:10] 2026-04-21 22:36:05,727 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-21 18:37:10] 2026-04-21 22:36:05,727 | INFO     | job 7105411025 has completed (purged errors)
[2026-04-21 18:37:10] 2026-04-21 22:36:05,727 | INFO     | overall cleanup function is called
[2026-04-21 18:37:10] 2026-04-21 22:36:06,739 | INFO     | --- collectZombieJob: --- 10, [933854]
[2026-04-21 18:37:10] 2026-04-21 22:36:06,739 | INFO     | zombie collector waiting for pid 933854
[2026-04-21 18:37:10] 2026-04-21 22:36:06,739 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-21 18:37:10] 2026-04-21 22:36:06,739 | INFO     | collected zombie processes
[2026-04-21 18:37:10] 2026-04-21 22:36:06,740 | INFO     | will attempt to kill all subprocesses of pid=933854
[2026-04-21 18:37:10] 2026-04-21 22:36:07,615 | INFO     | process IDs to be killed: [933854] (in reverse order)
[2026-04-21 18:37:10] 2026-04-21 22:36:07,750 | WARNING  | found no corresponding commands to process id(s)
[2026-04-21 18:37:10] 2026-04-21 22:36:07,750 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-21 18:37:10] 2026-04-21 22:36:07,765 | INFO     | did not find any defunct processes belonging to 933854
[2026-04-21 18:37:10] 2026-04-21 22:36:07,779 | INFO     | did not find any defunct processes belonging to 933854
[2026-04-21 18:37:10] 2026-04-21 22:36:07,779 | INFO     | Ready for new job
[2026-04-21 18:37:10] 2026-04-21 22:36:07,782 | INFO     | **************************************
[2026-04-21 18:37:10] 2026-04-21 22:36:07,782 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-21 18:37:10] 2026-04-21 22:36:07,782 | INFO     | **************************************
[2026-04-21 18:37:10] 2026-04-21 22:36:07,782 | INFO     | 
[2026-04-21 18:37:10] 2026-04-21 22:36:07,817 | INFO     | architecture information:
[2026-04-21 18:37:10] 2026-04-21 22:36:07,827 | INFO     | executing command: cat /etc/os-release
[2026-04-21 18:37:10] 2026-04-21 22:36:07,900 | INFO     | cat /etc/os-release:
[2026-04-21 18:37:10] NAME="CentOS Linux"
[2026-04-21 18:37:10] VERSION="7 (Core)"
[2026-04-21 18:37:10] ID="centos"
[2026-04-21 18:37:10] ID_LIKE="rhel fedora"
[2026-04-21 18:37:10] VERSION_ID="7"
[2026-04-21 18:37:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-21 18:37:10] ANSI_COLOR="0;31"
[2026-04-21 18:37:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-21 18:37:10] HOME_URL="https://www.centos.org/"
[2026-04-21 18:37:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-21 18:37:10] 
[2026-04-21 18:37:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-21 18:37:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-21 18:37:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-21 18:37:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-21 18:37:10] 
[2026-04-21 18:37:10] 2026-04-21 22:36:07,900 | INFO     | **************************************
[2026-04-21 18:37:10] 2026-04-21 22:36:08,404 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-04-21 18:37:10] 2026-04-21 22:36:08,487 | INFO     | sufficient remaining disk space (107093164032 B)
[2026-04-21 18:37:10] 2026-04-21 22:36:08,488 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-21 18:37:10] 2026-04-21 22:36:08,488 | INFO     | current server update state: UPDATING_FINAL
[2026-04-21 18:37:10] 2026-04-21 22:36:08,488 | INFO     | update_server=False
[2026-04-21 18:37:10] 2026-04-21 22:36:08,488 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-21 18:37:10] 2026-04-21 22:36:08,716 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-21 18:37:10] 2026-04-21 22:36:08,716 | INFO     | aborting loop
[2026-04-21 18:37:10] 2026-04-21 22:36:08,857 | INFO     | all job control threads have been joined
[2026-04-21 18:37:10] 2026-04-21 22:36:08,894 | INFO     | all payload control threads have been joined
[2026-04-21 18:37:10] 2026-04-21 22:36:09,204 | INFO     | all data control threads have been joined
[2026-04-21 18:37:10] 2026-04-21 22:36:09,493 | INFO     | [job] retrieve thread has finished
[2026-04-21 18:37:10] 2026-04-21 22:36:09,500 | INFO     | [payload] validate_post thread has finished
[2026-04-21 18:37:10] 2026-04-21 22:36:09,586 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-21 18:37:10] 2026-04-21 22:36:09,718 | INFO     | [payload] failed_post thread has finished
[2026-04-21 18:37:10] 2026-04-21 22:36:09,722 | INFO     | [job] job monitor thread has finished
[2026-04-21 18:37:10] 2026-04-21 22:36:09,863 | INFO     | [job] control thread has finished
[2026-04-21 18:37:10] 2026-04-21 22:36:09,908 | INFO     | [payload] control thread has finished
[2026-04-21 18:37:10] 2026-04-21 22:36:10,076 | INFO     | [job] create_data_payload thread has finished
[2026-04-21 18:37:10] 2026-04-21 22:36:10,078 | INFO     | [payload] execute_payloads thread has finished
[2026-04-21 18:37:10] 2026-04-21 22:36:10,210 | INFO     | [data] control thread has finished
[2026-04-21 18:37:10] 2026-04-21 22:36:10,580 | INFO     | [payload] validate_pre thread has finished
[2026-04-21 18:37:10] 2026-04-21 22:36:10,592 | INFO     | [job] validate thread has finished
[2026-04-21 18:37:10] 2026-04-21 22:36:10,594 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-21 18:37:10] 2026-04-21 22:36:10,658 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-21 18:37:10] 2026-04-21 22:36:10,724 | INFO     | [data] copytool_in thread has finished
[2026-04-21 18:37:10] 2026-04-21 22:36:10,991 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-21 18:37:10] 2026-04-21 22:36:11,593 | INFO     | [data] copytool_out thread has finished
[2026-04-21 18:37:10] 2026-04-21 22:36:11,664 | INFO     | [job] queue monitor thread has finished
[2026-04-21 18:37:10] 2026-04-21 22:36:14,999 | INFO     | [data] queue_monitor thread has finished
[2026-04-21 18:37:10] 2026-04-21 22:36:41,731 | INFO     | PID=929388 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-21 18:37:10] 2026-04-21 22:36:41,731 | INFO     | .. there are 17 such processes running
[2026-04-21 18:37:10] 2026-04-21 22:36:41,731 | INFO     | found 0 job(s) in 20 queues
[2026-04-21 18:37:10] 2026-04-21 22:36:41,732 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-21 18:37:10] 2026-04-21 22:36:41,744 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-21 18:37:10] 2026-04-21 22:37:02,847 | INFO     | [monitor] cgroup control has ended
[2026-04-21 18:37:10] 2026-04-21 22:37:04,583 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140118493079360)>', '<ExcThread(monitor, started 140118115469056)>']
[2026-04-21 18:37:10] 2026-04-21 22:37:04,882 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-21 18:37:10] 2026-04-21 22:37:04,882 | INFO     | [monitor] control thread has ended
[2026-04-21 18:37:10] 2026-04-21 22:37:09,609 | INFO     | all workflow threads have been joined
[2026-04-21 18:37:10] 2026-04-21 22:37:09,609 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-21 18:37:10] 2026-04-21 22:37:09,609 | INFO     | traces error code: 0
[2026-04-21 18:37:10] 2026-04-21 22:37:09,610 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-21 18:37:10] 2026-04-21 22:37:10,291 [wrapper] ==== pilot stdout END ====
[2026-04-21 18:37:10] 2026-04-21 22:37:10,313 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-21 18:37:10] 2026-04-21 22:37:10,343 [wrapper] pilotpid: 929388
[2026-04-21 18:37:10] 2026-04-21 22:37:10,353 [wrapper] Pilot exit status: 0
[2026-04-21 18:37:10] 2026-04-21 22:37:10,394 [wrapper] pandaids: 7105411025
[2026-04-21 18:37:10] 2026-04-21 22:37:10,542 [wrapper] cleanup supervisor_pilot 1546131 929389
[2026-04-21 18:37:10] 2026-04-21 22:37:10,565 [wrapper] Test setup, not cleaning
[2026-04-21 18:37:10] 2026-04-21 22:37:10,581 [wrapper] apfmon messages muted
[2026-04-21 18:37:10] 2026-04-21 22:37:10,607 [wrapper] ==== wrapper stdout END ====
[2026-04-21 18:37:10] 2026-04-21 22:37:10,626 [wrapper] ==== wrapper stderr END ====
[2026-04-21 18:37:10]  *** Error codes and diagnostics ***
[2026-04-21 18:37:10]     "exeErrorCode": 0,
[2026-04-21 18:37:10]     "pilotErrorCode": 0,
[2026-04-21 18:37:10]  *** Listing of results directory ***
[2026-04-21 18:37:11] total 2466444
[2026-04-21 18:37:11] -rwx------. 1 boincer umatlas      36322 Apr 21 07:06 runpilot2-wrapper.sh
[2026-04-21 18:37:11] -rw-r--r--. 1 boincer umatlas     644190 Apr 21 08:32 pilot3.tar.gz
[2026-04-21 18:37:11] -rw-r--r--. 1 boincer umatlas       5094 Apr 21 08:43 queuedata.json
[2026-04-21 18:37:11] -rw-r--r--. 1 boincer umatlas        100 Apr 21 14:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-21 18:37:11] -rwxr-xr-x. 1 boincer umatlas       7986 Apr 21 14:05 run_atlas
[2026-04-21 18:37:11] -rw-r--r--. 1 boincer umatlas        105 Apr 21 14:05 job.xml
[2026-04-21 18:37:11] -rw-r--r--. 2 boincer umatlas 2240811311 Apr 21 14:05 EVNT.49820242._000034.pool.root.1
[2026-04-21 18:37:11] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 14:05 start_atlas.sh
[2026-04-21 18:37:11] drwxrwx--x. 2 boincer umatlas       4096 Apr 21 14:05 shared
[2026-04-21 18:37:11] -rw-r--r--. 2 boincer umatlas     656924 Apr 21 14:05 input.tar.gz
[2026-04-21 18:37:11] -rw-r--r--. 1 boincer umatlas          0 Apr 21 14:05 boinc_lockfile
[2026-04-21 18:37:11] -rw-r--r--. 1 boincer umatlas       2551 Apr 21 14:05 pandaJob.out
[2026-04-21 18:37:11] -rw-------. 1 boincer umatlas         57 Apr 21 14:05 setup.sh.local
[2026-04-21 18:37:11] -rw-------. 1 boincer umatlas     994998 Apr 21 14:05 agis_schedconf.cvmfs.json
[2026-04-21 18:37:11] -rw-------. 1 boincer umatlas        429 Apr 21 14:05 workernode_map.json
[2026-04-21 18:37:11] drwx------. 5 boincer umatlas       4096 Apr 21 14:05 pilot3
[2026-04-21 18:37:11] -rw-r--r--. 1 boincer umatlas       6874 Apr 21 18:30 init_data.xml
[2026-04-21 18:37:11] -rw-r--r--. 1 boincer umatlas        489 Apr 21 18:35 boinc_task_state.xml
[2026-04-21 18:37:11] -rw-------. 1 boincer umatlas  277122675 Apr 21 18:35 HITS.49820244._014794.pool.root.1
[2026-04-21 18:37:11] -rw-------. 1 boincer umatlas       1048 Apr 21 18:35 memory_monitor_summary.json
[2026-04-21 18:37:11] -rw-------. 1 boincer umatlas         95 Apr 21 18:35 pilot_heartbeat.json
[2026-04-21 18:37:11] -rw-------. 1 boincer umatlas    1509089 Apr 21 18:36 agis_ddmendpoints.agis.ALL.json
[2026-04-21 18:37:11] -rw-------. 1 boincer umatlas     438806 Apr 21 18:36 log.49820244._014794.job.log.tgz.1
[2026-04-21 18:37:11] -rw-------. 1 boincer umatlas       6375 Apr 21 18:36 heartbeat_new.json
[2026-04-21 18:37:11] -rw-------. 1 boincer umatlas       6266 Apr 21 18:36 heartbeat.json
[2026-04-21 18:37:11] -rw-------. 1 boincer umatlas       4819 Apr 21 18:37 pilotlog.txt
[2026-04-21 18:37:11] -rw-r--r--. 1 boincer umatlas       8192 Apr 21 18:37 boinc_mmap_file
[2026-04-21 18:37:11] -rw-------. 1 boincer umatlas    1381668 Apr 21 18:37 log.49820244._014794.job.log.1
[2026-04-21 18:37:11] -rw-r--r--. 1 boincer umatlas         28 Apr 21 18:37 wrapper_checkpoint.txt
[2026-04-21 18:37:11] -rw-------. 1 boincer umatlas        357 Apr 21 18:37 output.list
[2026-04-21 18:37:11] -rw-r--r--. 1 boincer umatlas        410 Apr 21 18:37 runtime_log
[2026-04-21 18:37:11] -rw-------. 1 boincer umatlas    1843200 Apr 21 18:37 result.tar.gz
[2026-04-21 18:37:11] -rw-r--r--. 1 boincer umatlas       8964 Apr 21 18:37 runtime_log.err
[2026-04-21 18:37:11] -rw-------. 1 boincer umatlas        660 Apr 21 18:37 5a3d70973708.diag
[2026-04-21 18:37:11] -rw-r--r--. 1 boincer umatlas      21021 Apr 21 18:37 stderr.txt
[2026-04-21 18:37:11] HITS file was successfully produced:
[2026-04-21 18:37:11] -rw-------. 1 boincer umatlas 277122675 Apr 21 18:35 shared/HITS.pool.root.1
[2026-04-21 18:37:11]  *** Contents of shared directory: ***
[2026-04-21 18:37:11] total 2461392
[2026-04-21 18:37:11] -rw-r--r--. 2 boincer umatlas 2240811311 Apr 21 14:05 ATLAS.root_0
[2026-04-21 18:37:11] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 14:05 start_atlas.sh
[2026-04-21 18:37:11] -rw-r--r--. 2 boincer umatlas     656924 Apr 21 14:05 input.tar.gz
[2026-04-21 18:37:11] -rw-------. 1 boincer umatlas  277122675 Apr 21 18:35 HITS.pool.root.1
[2026-04-21 18:37:11] -rw-------. 1 boincer umatlas    1843200 Apr 21 18:37 result.tar.gz
18:37:12 (925623): run_atlas exited; CPU time 59026.188805
18:37:12 (925623): called boinc_finish(0)

</stderr_txt>
]]>

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