Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:58:50 (405633): wrapper (7.7.26015): starting
13:58:50 (405633): wrapper: running run_atlas (--nthreads 8)
[2026-04-21 13:58:50] Arguments: --nthreads 8
[2026-04-21 13:58:50] Threads: 8
[2026-04-21 13:58:50] Checking for CVMFS
[2026-04-21 13:58:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-21 13:58:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-21 13:58:51] Running cvmfs_config stat atlas.cern.ch
[2026-04-21 13:58:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-21 13:58:52] 2.13.3.0 12563 170120 265968 158698 3 886 28590417 40960000 22149 16776704 0 355781227 99.654 315626055 34934 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-21 13:58:52] CVMFS is ok
[2026-04-21 13:58:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 13:58:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 13:58:52] Further information can be found at the LHC@home message board.
[2026-04-21 13:58:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 13:58:52] Checking for apptainer binary...
[2026-04-21 13:58:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-21 13:58:52] Running /usr/bin/apptainer --version
[2026-04-21 13:58:52] apptainer version 1.4.5-2.el9
[2026-04-21 13:58:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 13:58:53] c-211-33-3.aglt2.org
[2026-04-21 13:58:53] apptainer works
[2026-04-21 13:58:53] Set ATHENA_PROC_NUMBER=8
[2026-04-21 13:58:53] Set ATHENA_CORE_NUMBER=8
[2026-04-21 13:58:53] Starting ATLAS job with PandaID=7105410962
[2026-04-21 13:58:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-21 19:35:52]  *** The last 200 lines of the pilot log: ***
[2026-04-21 19:35:52] 2026-04-21 23:35:14,412 | INFO     | job 7105410962 has finished - writing final server update
[2026-04-21 19:35:52] 2026-04-21 23:35:14,412 | INFO     | total number of processed events: 400 (read)
[2026-04-21 19:35:52] 2026-04-21 23:35:14,531 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-7105410962/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 19:35:52] 2026-04-21 23:35:14,533 | INFO     | extracted standard info from prmon json
[2026-04-21 19:35:52] 2026-04-21 23:35:14,566 | INFO     | extracted standard memory fields from prmon json
[2026-04-21 19:35:52] 2026-04-21 23:35:14,566 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-21 19:35:52] 2026-04-21 23:35:14,571 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-21 19:35:52] 2026-04-21 23:35:14,603 | INFO     | fitting pss+swap vs Time
[2026-04-21 19:35:52] 2026-04-21 23:35:14,614 | INFO     | sum of square deviations: 11043420485.775042
[2026-04-21 19:35:52] 2026-04-21 23:35:14,617 | INFO     | sum of deviations: 103499182006.06076
[2026-04-21 19:35:52] 2026-04-21 23:35:14,663 | INFO     | mean x (centered): 0.0
[2026-04-21 19:35:52] 2026-04-21 23:35:14,663 | INFO     | mean y: 2502091.3951367782
[2026-04-21 19:35:52] 2026-04-21 23:35:14,663 | INFO     | intersect: 2502091.3951367782
[2026-04-21 19:35:52] 2026-04-21 23:35:14,664 | INFO     | chi2: 4.5001467350734625
[2026-04-21 19:35:52] 2026-04-21 23:35:14,664 | INFO     | sum of square deviations: 10547552454.626572
[2026-04-21 19:35:52] 2026-04-21 23:35:14,671 | INFO     | sum of deviations: 143105873536.72214
[2026-04-21 19:35:52] 2026-04-21 23:35:14,671 | INFO     | mean x (centered): 0.0
[2026-04-21 19:35:52] 2026-04-21 23:35:14,672 | INFO     | mean y: 2514154.388888889
[2026-04-21 19:35:52] 2026-04-21 23:35:14,672 | INFO     | intersect: 2514154.388888889
[2026-04-21 19:35:52] 2026-04-21 23:35:14,672 | INFO     | chi2: 3.123655575174397
[2026-04-21 19:35:52] 2026-04-21 23:35:14,673 | INFO     | current chi2=3.123655575174397 (change=30.587695044939355 %)
[2026-04-21 19:35:52] 2026-04-21 23:35:14,673 | INFO     | sum of square deviations: 10066793885.335361
[2026-04-21 19:35:52] 2026-04-21 23:35:14,680 | INFO     | sum of deviations: 140731009853.31976
[2026-04-21 19:35:52] 2026-04-21 23:35:14,680 | INFO     | mean x (centered): 0.0
[2026-04-21 19:35:52] 2026-04-21 23:35:14,680 | INFO     | mean y: 2513401.015673981
[2026-04-21 19:35:52] 2026-04-21 23:35:14,680 | INFO     | intersect: 2513401.015673981
[2026-04-21 19:35:52] 2026-04-21 23:35:14,681 | INFO     | chi2: 3.123403954751599
[2026-04-21 19:35:52] 2026-04-21 23:35:14,681 | INFO     | current chi2=3.123403954751599 (change=0.008055319056230408 %)
[2026-04-21 19:35:52] 2026-04-21 23:35:14,681 | INFO     | right removable region: 318
[2026-04-21 19:35:52] 2026-04-21 23:35:14,682 | INFO     | sum of square deviations: 10547544713.39506
[2026-04-21 19:35:52] 2026-04-21 23:35:14,697 | INFO     | sum of deviations: 19423729679.129704
[2026-04-21 19:35:52] 2026-04-21 23:35:14,698 | INFO     | mean x (centered): 0.0
[2026-04-21 19:35:52] 2026-04-21 23:35:14,698 | INFO     | mean y: 2527869.4907407407
[2026-04-21 19:35:52] 2026-04-21 23:35:14,698 | INFO     | intersect: 2527869.4907407407
[2026-04-21 19:35:52] 2026-04-21 23:35:14,699 | INFO     | chi2: 1.9223733326209884
[2026-04-21 19:35:52] 2026-04-21 23:35:14,699 | INFO     | current chi2=1.9223733326209884 (change=57.28198554864219 %)
[2026-04-21 19:35:52] 2026-04-21 23:35:14,699 | INFO     | sum of square deviations: 10066739112.996845
[2026-04-21 19:35:52] 2026-04-21 23:35:14,702 | INFO     | sum of deviations: -17305613942.579937
[2026-04-21 19:35:52] 2026-04-21 23:35:14,702 | INFO     | mean x (centered): 0.0
[2026-04-21 19:35:52] 2026-04-21 23:35:14,702 | INFO     | mean y: 2539507.489028213
[2026-04-21 19:35:52] 2026-04-21 23:35:14,702 | INFO     | intersect: 2539507.489028213
[2026-04-21 19:35:52] 2026-04-21 23:35:14,703 | INFO     | chi2: 1.493811808896559
[2026-04-21 19:35:52] 2026-04-21 23:35:14,703 | INFO     | current chi2=1.493811808896559 (change=22.293355637644176 %)
[2026-04-21 19:35:52] 2026-04-21 23:35:14,703 | INFO     | left removable region: 10
[2026-04-21 19:35:52] 2026-04-21 23:35:14,704 | INFO     | sum of square deviations: 9060941458.269478
[2026-04-21 19:35:52] 2026-04-21 23:35:14,706 | INFO     | sum of deviations: 22373181119.92535
[2026-04-21 19:35:52] 2026-04-21 23:35:14,706 | INFO     | mean x (centered): 0.0
[2026-04-21 19:35:52] 2026-04-21 23:35:14,706 | INFO     | mean y: 2552361.938311688
[2026-04-21 19:35:52] 2026-04-21 23:35:14,707 | INFO     | intersect: 2552361.938311688
[2026-04-21 19:35:52] 2026-04-21 23:35:14,707 | INFO     | chi2: 0.08185961240193698
[2026-04-21 19:35:52] 2026-04-21 23:35:14,707 | INFO     | current memory leak: 2.47 B/s (using 308 data points, chi2=0.08)
[2026-04-21 19:35:52] 2026-04-21 23:35:14,708 | INFO     | could have reported an average CPU frequency of 2624 MHz (15 samples)
[2026-04-21 19:35:52] 2026-04-21 23:35:14,708 | INFO     | ..............................
[2026-04-21 19:35:52] 2026-04-21 23:35:14,708 | INFO     | . Timing measurements:
[2026-04-21 19:35:52] 2026-04-21 23:35:14,709 | INFO     | . get job = 0 s
[2026-04-21 19:35:52] 2026-04-21 23:35:14,709 | INFO     | . initial setup = 22 s
[2026-04-21 19:35:52] 2026-04-21 23:35:14,709 | INFO     | . payload setup = 43 s
[2026-04-21 19:35:52] 2026-04-21 23:35:14,709 | INFO     | . stage-in = 0 s
[2026-04-21 19:35:52] 2026-04-21 23:35:14,709 | INFO     | . payload execution = 20045 s
[2026-04-21 19:35:52] 2026-04-21 23:35:14,709 | INFO     | . stage-out = 6 s
[2026-04-21 19:35:52] 2026-04-21 23:35:14,709 | INFO     | . log creation = 0 s
[2026-04-21 19:35:52] 2026-04-21 23:35:14,709 | INFO     | ..............................
[2026-04-21 19:35:52] 2026-04-21 23:35:14,974 | INFO     | 
[2026-04-21 19:35:52] 2026-04-21 23:35:14,975 | INFO     | job summary report
[2026-04-21 19:35:52] 2026-04-21 23:35:14,975 | INFO     | --------------------------------------------------
[2026-04-21 19:35:52] 2026-04-21 23:35:14,975 | INFO     | PanDA job id: 7105410962
[2026-04-21 19:35:52] 2026-04-21 23:35:14,975 | INFO     | task id: 49820244
[2026-04-21 19:35:52] 2026-04-21 23:35:14,975 | INFO     | errors: (none)
[2026-04-21 19:35:52] 2026-04-21 23:35:14,975 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-21 19:35:52] 2026-04-21 23:35:14,976 | INFO     | pilot state: finished 
[2026-04-21 19:35:52] 2026-04-21 23:35:14,976 | INFO     | transexitcode: 0
[2026-04-21 19:35:52] 2026-04-21 23:35:14,976 | INFO     | exeerrorcode: 0
[2026-04-21 19:35:52] 2026-04-21 23:35:14,976 | INFO     | exeerrordiag: 
[2026-04-21 19:35:52] 2026-04-21 23:35:14,976 | INFO     | exitcode: 0
[2026-04-21 19:35:52] 2026-04-21 23:35:14,976 | INFO     | exitmsg: OK
[2026-04-21 19:35:52] 2026-04-21 23:35:14,976 | INFO     | cpuconsumptiontime: 79770 s
[2026-04-21 19:35:52] 2026-04-21 23:35:14,976 | INFO     | nevents: 400
[2026-04-21 19:35:52] 2026-04-21 23:35:14,976 | INFO     | neventsw: 0
[2026-04-21 19:35:52] 2026-04-21 23:35:14,977 | INFO     | pid: 423431
[2026-04-21 19:35:52] 2026-04-21 23:35:14,977 | INFO     | pgrp: 423431
[2026-04-21 19:35:52] 2026-04-21 23:35:14,977 | INFO     | corecount: 8
[2026-04-21 19:35:52] 2026-04-21 23:35:14,977 | INFO     | event service: False
[2026-04-21 19:35:52] 2026-04-21 23:35:14,977 | INFO     | sizes: {0: 2274522, 1: 2274606, 2: 2246451, 3: 2276435, 14: 2276463, 20093: 2309759, 20094: 2309886, 20101: 2318996, 20102: 2319134}
[2026-04-21 19:35:52] 2026-04-21 23:35:14,977 | INFO     | --------------------------------------------------
[2026-04-21 19:35:52] 2026-04-21 23:35:14,977 | INFO     | 
[2026-04-21 19:35:52] 2026-04-21 23:35:14,977 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-04-21 19:35:52] 2026-04-21 23:35:15,205 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-21 19:35:52] 2026-04-21 23:35:15,205 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-21 19:35:52] 2026-04-21 23:35:15,205 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-21 19:35:52] 2026-04-21 23:35:15,205 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-21 19:35:52] 2026-04-21 23:35:15,205 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-21 19:35:52] 2026-04-21 23:35:15,205 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-21 19:35:52] 2026-04-21 23:35:15,206 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-21 19:35:52] 2026-04-21 23:35:15,206 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-21 19:35:52] 2026-04-21 23:35:15,206 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-21 19:35:52] 2026-04-21 23:35:15,206 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-21 19:35:52] 2026-04-21 23:35:15,206 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-21 19:35:52] 2026-04-21 23:35:15,206 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-21 19:35:52] 2026-04-21 23:35:15,206 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-21 19:35:52] 2026-04-21 23:35:15,206 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-21 19:35:52] 2026-04-21 23:35:15,206 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-21 19:35:52] 2026-04-21 23:35:15,206 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-21 19:35:52] 2026-04-21 23:35:15,206 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-21 19:35:52] 2026-04-21 23:35:15,207 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-21 19:35:52] 2026-04-21 23:35:15,207 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-21 19:35:52] 2026-04-21 23:35:15,207 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-21 19:35:52] 2026-04-21 23:35:15,207 | INFO     | job 7105410962 has completed (purged errors)
[2026-04-21 19:35:52] 2026-04-21 23:35:15,207 | INFO     | overall cleanup function is called
[2026-04-21 19:35:52] 2026-04-21 23:35:16,240 | INFO     | --- collectZombieJob: --- 10, [423431]
[2026-04-21 19:35:52] 2026-04-21 23:35:16,242 | INFO     | zombie collector waiting for pid 423431
[2026-04-21 19:35:52] 2026-04-21 23:35:16,242 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-21 19:35:52] 2026-04-21 23:35:16,242 | INFO     | collected zombie processes
[2026-04-21 19:35:52] 2026-04-21 23:35:16,242 | INFO     | will attempt to kill all subprocesses of pid=423431
[2026-04-21 19:35:52] 2026-04-21 23:35:16,417 | INFO     | PID=409519 has CPU usage=12.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-21 19:35:52] 2026-04-21 23:35:16,417 | INFO     | .. there are 17 such processes running
[2026-04-21 19:35:52] 2026-04-21 23:35:17,875 | INFO     | process IDs to be killed: [423431] (in reverse order)
[2026-04-21 19:35:52] 2026-04-21 23:35:18,119 | WARNING  | found no corresponding commands to process id(s)
[2026-04-21 19:35:52] 2026-04-21 23:35:18,119 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-21 19:35:52] 2026-04-21 23:35:18,168 | INFO     | did not find any defunct processes belonging to 423431
[2026-04-21 19:35:52] 2026-04-21 23:35:18,195 | INFO     | did not find any defunct processes belonging to 423431
[2026-04-21 19:35:52] 2026-04-21 23:35:18,195 | INFO     | Ready for new job
[2026-04-21 19:35:52] 2026-04-21 23:35:18,202 | INFO     | **************************************
[2026-04-21 19:35:52] 2026-04-21 23:35:18,203 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-21 19:35:52] 2026-04-21 23:35:18,203 | INFO     | **************************************
[2026-04-21 19:35:52] 2026-04-21 23:35:18,203 | INFO     | 
[2026-04-21 19:35:52] 2026-04-21 23:35:18,228 | INFO     | architecture information:
[2026-04-21 19:35:52] 2026-04-21 23:35:18,249 | INFO     | executing command: cat /etc/os-release
[2026-04-21 19:35:52] 2026-04-21 23:35:18,359 | INFO     | cat /etc/os-release:
[2026-04-21 19:35:52] NAME="CentOS Linux"
[2026-04-21 19:35:52] VERSION="7 (Core)"
[2026-04-21 19:35:52] ID="centos"
[2026-04-21 19:35:52] ID_LIKE="rhel fedora"
[2026-04-21 19:35:52] VERSION_ID="7"
[2026-04-21 19:35:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-21 19:35:52] ANSI_COLOR="0;31"
[2026-04-21 19:35:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-21 19:35:52] HOME_URL="https://www.centos.org/"
[2026-04-21 19:35:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-21 19:35:52] 
[2026-04-21 19:35:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-21 19:35:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-21 19:35:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-21 19:35:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-21 19:35:52] 
[2026-04-21 19:35:52] 2026-04-21 23:35:18,359 | INFO     | **************************************
[2026-04-21 19:35:52] 2026-04-21 23:35:18,863 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-04-21 19:35:52] 2026-04-21 23:35:18,944 | INFO     | sufficient remaining disk space (104737013760 B)
[2026-04-21 19:35:52] 2026-04-21 23:35:18,944 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-21 19:35:52] 2026-04-21 23:35:18,944 | INFO     | current server update state: UPDATING_FINAL
[2026-04-21 19:35:52] 2026-04-21 23:35:18,945 | INFO     | update_server=False
[2026-04-21 19:35:52] 2026-04-21 23:35:18,945 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-21 19:35:52] 2026-04-21 23:35:19,044 | INFO     | all payload control threads have been joined
[2026-04-21 19:35:52] 2026-04-21 23:35:19,246 | INFO     | all job control threads have been joined
[2026-04-21 19:35:52] 2026-04-21 23:35:19,305 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-21 19:35:52] 2026-04-21 23:35:19,437 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-21 19:35:52] 2026-04-21 23:35:19,438 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-21 19:35:52] 2026-04-21 23:35:19,438 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-21 19:35:52] 2026-04-21 23:35:19,438 | INFO     | will abort loop
[2026-04-21 19:35:52] 2026-04-21 23:35:19,483 | INFO     | all data control threads have been joined
[2026-04-21 19:35:52] 2026-04-21 23:35:19,951 | INFO     | [job] retrieve thread has finished
[2026-04-21 19:35:52] 2026-04-21 23:35:20,051 | INFO     | [payload] control thread has finished
[2026-04-21 19:35:52] 2026-04-21 23:35:20,099 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-21 19:35:52] 2026-04-21 23:35:20,166 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-21 19:35:52] 2026-04-21 23:35:20,254 | INFO     | [job] control thread has finished
[2026-04-21 19:35:52] 2026-04-21 23:35:20,458 | INFO     | [job] job monitor thread has finished
[2026-04-21 19:35:52] 2026-04-21 23:35:20,491 | INFO     | [data] control thread has finished
[2026-04-21 19:35:52] 2026-04-21 23:35:20,567 | INFO     | [payload] failed_post thread has finished
[2026-04-21 19:35:52] 2026-04-21 23:35:20,595 | INFO     | [payload] execute_payloads thread has finished
[2026-04-21 19:35:52] 2026-04-21 23:35:20,616 | INFO     | [data] copytool_in thread has finished
[2026-04-21 19:35:52] 2026-04-21 23:35:20,625 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-21 19:35:52] 2026-04-21 23:35:21,105 | INFO     | [job] queue monitor thread has finished
[2026-04-21 19:35:52] 2026-04-21 23:35:21,116 | INFO     | [job] validate thread has finished
[2026-04-21 19:35:52] 2026-04-21 23:35:21,133 | INFO     | [payload] validate_post thread has finished
[2026-04-21 19:35:52] 2026-04-21 23:35:21,313 | INFO     | [data] copytool_out thread has finished
[2026-04-21 19:35:52] 2026-04-21 23:35:21,363 | INFO     | [job] create_data_payload thread has finished
[2026-04-21 19:35:52] 2026-04-21 23:35:21,367 | INFO     | [payload] validate_pre thread has finished
[2026-04-21 19:35:52] 2026-04-21 23:35:24,178 | INFO     | [data] queue_monitor thread has finished
[2026-04-21 19:35:52] 2026-04-21 23:35:32,739 | INFO     | [monitor] cgroup control has ended
[2026-04-21 19:35:52] 2026-04-21 23:35:33,518 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139857214625600)>', '<ExcThread(monitor, started 139856650942208)>']
[2026-04-21 19:35:52] 2026-04-21 23:35:38,545 | INFO     | all workflow threads have been joined
[2026-04-21 19:35:52] 2026-04-21 23:35:38,545 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-21 19:35:52] 2026-04-21 23:35:38,545 | INFO     | traces error code: 0
[2026-04-21 19:35:52] 2026-04-21 23:35:38,545 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-21 19:35:52] 2026-04-21 23:35:49,698 | INFO     | PID=409519 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-21 19:35:52] 2026-04-21 23:35:49,699 | INFO     | .. there are 17 such processes running
[2026-04-21 19:35:52] 2026-04-21 23:35:49,706 | INFO     | found 0 job(s) in 20 queues
[2026-04-21 19:35:52] 2026-04-21 23:35:49,706 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-21 19:35:52] 2026-04-21 23:35:49,706 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-21 19:35:52] 2026-04-21 23:35:49,706 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-21 19:35:52] 2026-04-21 23:35:49,706 | INFO     | [monitor] control thread has ended
[2026-04-21 19:35:52] 2026-04-21 23:35:50,890 [wrapper] ==== pilot stdout END ====
[2026-04-21 19:35:52] 2026-04-21 23:35:50,950 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-21 19:35:52] 2026-04-21 23:35:51,014 [wrapper] pilotpid: 409519
[2026-04-21 19:35:52] 2026-04-21 23:35:51,059 [wrapper] Pilot exit status: 0
[2026-04-21 19:35:52] 2026-04-21 23:35:51,221 [wrapper] pandaids: 7105410962
[2026-04-21 19:35:52] 2026-04-21 23:35:51,388 [wrapper] cleanup supervisor_pilot  993779 409520
[2026-04-21 19:35:52] 2026-04-21 23:35:51,411 [wrapper] Test setup, not cleaning
[2026-04-21 19:35:52] 2026-04-21 23:35:51,431 [wrapper] apfmon messages muted
[2026-04-21 19:35:52] 2026-04-21 23:35:51,447 [wrapper] ==== wrapper stdout END ====
[2026-04-21 19:35:52] 2026-04-21 23:35:51,481 [wrapper] ==== wrapper stderr END ====
[2026-04-21 19:35:52]  *** Error codes and diagnostics ***
[2026-04-21 19:35:52]     "exeErrorCode": 0,
[2026-04-21 19:35:52]     "pilotErrorCode": 0,
[2026-04-21 19:35:52]  *** Listing of results directory ***
[2026-04-21 19:35:52] total 2451420
[2026-04-21 19:35:52] -rwx------. 1 boincer umatlas      36322 Apr 21 07:06 runpilot2-wrapper.sh
[2026-04-21 19:35:52] -rw-r--r--. 1 boincer umatlas     644190 Apr 21 08:32 pilot3.tar.gz
[2026-04-21 19:35:52] -rw-r--r--. 1 boincer umatlas       5094 Apr 21 08:36 queuedata.json
[2026-04-21 19:35:52] -rw-r--r--. 1 boincer umatlas        100 Apr 21 13:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-21 19:35:52] -rwxr-xr-x. 1 boincer umatlas       7986 Apr 21 13:58 run_atlas
[2026-04-21 19:35:52] -rw-r--r--. 1 boincer umatlas        105 Apr 21 13:58 job.xml
[2026-04-21 19:35:52] -rw-r--r--. 2 boincer umatlas 2235290498 Apr 21 13:58 EVNT.49820242._000031.pool.root.1
[2026-04-21 19:35:52] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 13:58 start_atlas.sh
[2026-04-21 19:35:52] drwxrwx--x. 2 boincer umatlas       4096 Apr 21 13:58 shared
[2026-04-21 19:35:52] -rw-r--r--. 2 boincer umatlas     656925 Apr 21 13:58 input.tar.gz
[2026-04-21 19:35:52] -rw-r--r--. 1 boincer umatlas          0 Apr 21 13:58 boinc_lockfile
[2026-04-21 19:35:52] -rw-r--r--. 1 boincer umatlas       2551 Apr 21 13:58 pandaJob.out
[2026-04-21 19:35:52] -rw-------. 1 boincer umatlas         57 Apr 21 13:58 setup.sh.local
[2026-04-21 19:35:52] -rw-------. 1 boincer umatlas     994998 Apr 21 13:59 agis_schedconf.cvmfs.json
[2026-04-21 19:35:52] -rw-------. 1 boincer umatlas        444 Apr 21 13:59 workernode_map.json
[2026-04-21 19:35:52] drwx------. 5 boincer umatlas       4096 Apr 21 13:59 pilot3
[2026-04-21 19:35:52] -rw-r--r--. 1 boincer umatlas       6776 Apr 21 19:29 init_data.xml
[2026-04-21 19:35:52] -rw-------. 1 boincer umatlas  266518514 Apr 21 19:32 HITS.49820244._014731.pool.root.1
[2026-04-21 19:35:52] -rw-r--r--. 1 boincer umatlas        489 Apr 21 19:33 boinc_task_state.xml
[2026-04-21 19:35:52] -rw-------. 1 boincer umatlas       1044 Apr 21 19:35 memory_monitor_summary.json
[2026-04-21 19:35:52] -rw-------. 1 boincer umatlas    1509089 Apr 21 19:35 agis_ddmendpoints.agis.ALL.json
[2026-04-21 19:35:52] -rw-------. 1 boincer umatlas     536851 Apr 21 19:35 log.49820244._014731.job.log.tgz.1
[2026-04-21 19:35:52] -rw-------. 1 boincer umatlas       6417 Apr 21 19:35 heartbeat_new.json
[2026-04-21 19:35:52] -rw-------. 1 boincer umatlas       6308 Apr 21 19:35 heartbeat.json
[2026-04-21 19:35:52] -rw-r--r--. 1 boincer umatlas       8192 Apr 21 19:35 boinc_mmap_file
[2026-04-21 19:35:52] -rw-r--r--. 1 boincer umatlas         28 Apr 21 19:35 wrapper_checkpoint.txt
[2026-04-21 19:35:52] -rw-------. 1 boincer umatlas         95 Apr 21 19:35 pilot_heartbeat.json
[2026-04-21 19:35:52] -rw-------. 1 boincer umatlas        822 Apr 21 19:35 pilotlog.txt
[2026-04-21 19:35:52] -rw-------. 1 boincer umatlas    1661326 Apr 21 19:35 log.49820244._014731.job.log.1
[2026-04-21 19:35:52] -rw-------. 1 boincer umatlas        357 Apr 21 19:35 output.list
[2026-04-21 19:35:52] -rw-r--r--. 1 boincer umatlas        410 Apr 21 19:35 runtime_log
[2026-04-21 19:35:52] -rw-------. 1 boincer umatlas    2211840 Apr 21 19:35 result.tar.gz
[2026-04-21 19:35:52] -rw-r--r--. 1 boincer umatlas       8974 Apr 21 19:35 runtime_log.err
[2026-04-21 19:35:52] -rw-------. 1 boincer umatlas        657 Apr 21 19:35 5a3b974a4b34.diag
[2026-04-21 19:35:52] -rw-r--r--. 1 boincer umatlas      21143 Apr 21 19:35 stderr.txt
[2026-04-21 19:35:52] HITS file was successfully produced:
[2026-04-21 19:35:52] -rw-------. 1 boincer umatlas 266518514 Apr 21 19:32 shared/HITS.pool.root.1
[2026-04-21 19:35:52]  *** Contents of shared directory: ***
[2026-04-21 19:35:52] total 2446004
[2026-04-21 19:35:52] -rw-r--r--. 2 boincer umatlas 2235290498 Apr 21 13:58 ATLAS.root_0
[2026-04-21 19:35:52] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 13:58 start_atlas.sh
[2026-04-21 19:35:52] -rw-r--r--. 2 boincer umatlas     656925 Apr 21 13:58 input.tar.gz
[2026-04-21 19:35:52] -rw-------. 1 boincer umatlas  266518514 Apr 21 19:32 HITS.pool.root.1
[2026-04-21 19:35:52] -rw-------. 1 boincer umatlas    2211840 Apr 21 19:35 result.tar.gz
19:35:53 (405633): run_atlas exited; CPU time 80572.869130
19:35:53 (405633): called boinc_finish(0)

</stderr_txt>
]]>

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