Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:51:08 (3826298): wrapper (7.7.26015): starting
13:51:08 (3826298): wrapper: running run_atlas (--nthreads 10)
[2026-04-21 13:51:08] Arguments: --nthreads 10
[2026-04-21 13:51:08] Threads: 10
[2026-04-21 13:51:08] Checking for CVMFS
[2026-04-21 13:51:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-21 13:51:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-21 13:51:09] Running cvmfs_config stat atlas.cern.ch
[2026-04-21 13:51:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-21 13:51:10] 2.13.3.0 9890 240479 223268 158698 3 728 28646894 32935936 15078 16776704 0 1124680949 99.725 806217108 32758 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-21 13:51:10] CVMFS is ok
[2026-04-21 13:51:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 13:51:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 13:51:10] Further information can be found at the LHC@home message board.
[2026-04-21 13:51:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 13:51:10] Checking for apptainer binary...
[2026-04-21 13:51:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-21 13:51:10] Running /usr/bin/apptainer --version
[2026-04-21 13:51:10] apptainer version 1.4.5-2.el9
[2026-04-21 13:51:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 13:51:11] c-8-36.aglt2.org
[2026-04-21 13:51:11] apptainer works
[2026-04-21 13:51:11] Set ATHENA_PROC_NUMBER=10
[2026-04-21 13:51:11] Set ATHENA_CORE_NUMBER=10
[2026-04-21 13:51:11] Starting ATLAS job with PandaID=7105410468
[2026-04-21 13:51:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-22 01:39:28]  *** The last 200 lines of the pilot log: ***
[2026-04-22 01:39:28] 2026-04-22 05:38:27,380 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-22 01:39:28] 2026-04-22 05:38:27,850 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-22 01:39:28] 2026-04-22 05:38:28,345 | INFO     | PID=3831136 has CPU usage=10.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-22 01:39:28] 2026-04-22 05:38:28,346 | INFO     | .. there are 20 such processes running
[2026-04-22 01:39:28] 2026-04-22 05:38:28,944 | INFO     | job 7105410468 has state=finished
[2026-04-22 01:39:28] 2026-04-22 05:38:28,944 | INFO     | preparing for final server update for job 7105410468 in state='finished'
[2026-04-22 01:39:28] 2026-04-22 05:38:28,944 | INFO     | reading metadata from: /tmp/boinchome/slots/1/PanDA_Pilot-7105410468/jobReport.json
[2026-04-22 01:39:28] 2026-04-22 05:38:28,947 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/1/workernode_map.json
[2026-04-22 01:39:28] 2026-04-22 05:38:28,947 | INFO     | this job has now completed (state=finished)
[2026-04-22 01:39:28] 2026-04-22 05:38:28,948 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-22 01:39:28] 2026-04-22 05:38:28,948 | INFO     | log transfer has been attempted: DONE
[2026-04-22 01:39:28] 2026-04-22 05:38:29,056 | INFO     | job 7105410468 has finished - writing final server update
[2026-04-22 01:39:28] 2026-04-22 05:38:29,057 | INFO     | total number of processed events: 400 (read)
[2026-04-22 01:39:28] 2026-04-22 05:38:29,109 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7105410468/memory_monitor_summary.json (trf name=prmon)
[2026-04-22 01:39:28] 2026-04-22 05:38:29,161 | INFO     | extracted standard info from prmon json
[2026-04-22 01:39:28] 2026-04-22 05:38:29,161 | INFO     | extracted standard memory fields from prmon json
[2026-04-22 01:39:28] 2026-04-22 05:38:29,161 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-22 01:39:28] 2026-04-22 05:38:29,161 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-22 01:39:28] 2026-04-22 05:38:29,176 | INFO     | fitting pss+swap vs Time
[2026-04-22 01:39:28] 2026-04-22 05:38:29,181 | INFO     | sum of square deviations: 102312402083.9333
[2026-04-22 01:39:28] 2026-04-22 05:38:29,200 | INFO     | sum of deviations: 463820303438.36475
[2026-04-22 01:39:28] 2026-04-22 05:38:29,200 | INFO     | mean x (centered): 0.0
[2026-04-22 01:39:28] 2026-04-22 05:38:29,200 | INFO     | mean y: 2622217.518089725
[2026-04-22 01:39:28] 2026-04-22 05:38:29,200 | INFO     | intersect: 2622217.518089725
[2026-04-22 01:39:28] 2026-04-22 05:38:29,202 | INFO     | chi2: 6.387618116542444
[2026-04-22 01:39:28] 2026-04-22 05:38:29,203 | INFO     | sum of square deviations: 100107411133.97815
[2026-04-22 01:39:28] 2026-04-22 05:38:29,220 | INFO     | sum of deviations: 553500178965.2258
[2026-04-22 01:39:28] 2026-04-22 05:38:29,221 | INFO     | mean x (centered): 0.0
[2026-04-22 01:39:28] 2026-04-22 05:38:29,221 | INFO     | mean y: 2628391.998542274
[2026-04-22 01:39:28] 2026-04-22 05:38:29,221 | INFO     | intersect: 2628391.998542274
[2026-04-22 01:39:28] 2026-04-22 05:38:29,222 | INFO     | chi2: 4.985629483355898
[2026-04-22 01:39:28] 2026-04-22 05:38:29,222 | INFO     | current chi2=4.985629483355898 (change=21.94853555123657 %)
[2026-04-22 01:39:28] 2026-04-22 05:38:29,222 | INFO     | right removable region: 685
[2026-04-22 01:39:28] 2026-04-22 05:38:29,223 | INFO     | sum of square deviations: 100107439443.21434
[2026-04-22 01:39:28] 2026-04-22 05:38:29,235 | INFO     | sum of deviations: 236334568468.02036
[2026-04-22 01:39:28] 2026-04-22 05:38:29,236 | INFO     | mean x (centered): 0.0
[2026-04-22 01:39:28] 2026-04-22 05:38:29,236 | INFO     | mean y: 2637939.906705539
[2026-04-22 01:39:28] 2026-04-22 05:38:29,236 | INFO     | intersect: 2637939.906705539
[2026-04-22 01:39:28] 2026-04-22 05:38:29,237 | INFO     | chi2: 2.817468130517561
[2026-04-22 01:39:28] 2026-04-22 05:38:29,237 | INFO     | current chi2=2.817468130517561 (change=55.89172553661318 %)
[2026-04-22 01:39:28] 2026-04-22 05:38:29,238 | INFO     | sum of square deviations: 97934425979.94977
[2026-04-22 01:39:28] 2026-04-22 05:38:29,251 | INFO     | sum of deviations: 135666971882.94716
[2026-04-22 01:39:28] 2026-04-22 05:38:29,251 | INFO     | mean x (centered): 0.0
[2026-04-22 01:39:28] 2026-04-22 05:38:29,251 | INFO     | mean y: 2645000.2511013215
[2026-04-22 01:39:28] 2026-04-22 05:38:29,251 | INFO     | intersect: 2645000.2511013215
[2026-04-22 01:39:28] 2026-04-22 05:38:29,252 | INFO     | chi2: 2.1446774077522672
[2026-04-22 01:39:28] 2026-04-22 05:38:29,252 | INFO     | current chi2=2.1446774077522672 (change=23.879266476093346 %)
[2026-04-22 01:39:28] 2026-04-22 05:38:29,253 | INFO     | left removable region: 10
[2026-04-22 01:39:28] 2026-04-22 05:38:29,254 | INFO     | sum of square deviations: 95368454379.3866
[2026-04-22 01:39:28] 2026-04-22 05:38:29,265 | INFO     | sum of deviations: 225906961410.20462
[2026-04-22 01:39:28] 2026-04-22 05:38:29,266 | INFO     | mean x (centered): 0.0
[2026-04-22 01:39:28] 2026-04-22 05:38:29,266 | INFO     | mean y: 2651397.645925926
[2026-04-22 01:39:28] 2026-04-22 05:38:29,266 | INFO     | intersect: 2651397.645925926
[2026-04-22 01:39:28] 2026-04-22 05:38:29,267 | INFO     | chi2: 0.7161276744857474
[2026-04-22 01:39:28] 2026-04-22 05:38:29,267 | INFO     | current memory leak: 2.37 B/s (using 675 data points, chi2=0.72)
[2026-04-22 01:39:28] 2026-04-22 05:38:29,268 | INFO     | could have reported an average CPU frequency of 2600 MHz (27 samples)
[2026-04-22 01:39:28] 2026-04-22 05:38:29,268 | INFO     | ..............................
[2026-04-22 01:39:28] 2026-04-22 05:38:29,269 | INFO     | . Timing measurements:
[2026-04-22 01:39:28] 2026-04-22 05:38:29,269 | INFO     | . get job = 1 s
[2026-04-22 01:39:28] 2026-04-22 05:38:29,269 | INFO     | . initial setup = 48 s
[2026-04-22 01:39:28] 2026-04-22 05:38:29,269 | INFO     | . payload setup = 76 s
[2026-04-22 01:39:28] 2026-04-22 05:38:29,269 | INFO     | . stage-in = 1 s
[2026-04-22 01:39:28] 2026-04-22 05:38:29,269 | INFO     | . payload execution = 42190 s
[2026-04-22 01:39:28] 2026-04-22 05:38:29,269 | INFO     | . stage-out = 9 s
[2026-04-22 01:39:28] 2026-04-22 05:38:29,269 | INFO     | . log creation = 3 s
[2026-04-22 01:39:28] 2026-04-22 05:38:29,269 | INFO     | ..............................
[2026-04-22 01:39:28] 2026-04-22 05:38:29,832 | INFO     | 
[2026-04-22 01:39:28] 2026-04-22 05:38:29,921 | INFO     | job summary report
[2026-04-22 01:39:28] 2026-04-22 05:38:29,921 | INFO     | --------------------------------------------------
[2026-04-22 01:39:28] 2026-04-22 05:38:29,921 | INFO     | PanDA job id: 7105410468
[2026-04-22 01:39:28] 2026-04-22 05:38:29,921 | INFO     | task id: 49820244
[2026-04-22 01:39:28] 2026-04-22 05:38:29,922 | INFO     | errors: (none)
[2026-04-22 01:39:28] 2026-04-22 05:38:29,922 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-22 01:39:28] 2026-04-22 05:38:29,922 | INFO     | pilot state: finished 
[2026-04-22 01:39:28] 2026-04-22 05:38:29,922 | INFO     | transexitcode: 0
[2026-04-22 01:39:28] 2026-04-22 05:38:29,922 | INFO     | exeerrorcode: 0
[2026-04-22 01:39:28] 2026-04-22 05:38:29,922 | INFO     | exeerrordiag: 
[2026-04-22 01:39:28] 2026-04-22 05:38:29,922 | INFO     | exitcode: 0
[2026-04-22 01:39:28] 2026-04-22 05:38:29,922 | INFO     | exitmsg: OK
[2026-04-22 01:39:28] 2026-04-22 05:38:29,922 | INFO     | cpuconsumptiontime: 85432 s
[2026-04-22 01:39:28] 2026-04-22 05:38:29,944 | INFO     | nevents: 400
[2026-04-22 01:39:28] 2026-04-22 05:38:29,944 | INFO     | neventsw: 0
[2026-04-22 01:39:28] 2026-04-22 05:38:29,944 | INFO     | pid: 3840630
[2026-04-22 01:39:28] 2026-04-22 05:38:29,945 | INFO     | pgrp: 3840630
[2026-04-22 01:39:28] 2026-04-22 05:38:29,945 | INFO     | corecount: 10
[2026-04-22 01:39:28] 2026-04-22 05:38:29,969 | INFO     | event service: False
[2026-04-22 01:39:28] 2026-04-22 05:38:29,969 | INFO     | sizes: {0: 2274520, 1: 2274576, 2: 2274632, 3: 2274632, 4: 2252665, 6: 2276617, 18: 2276617, 42273: 2320055, 42274: 2320054, 42285: 2329108, 42286: 2329164, 42288:
[2026-04-22 01:39:28] 2026-04-22 05:38:29,969 | INFO     | --------------------------------------------------
[2026-04-22 01:39:28] 2026-04-22 05:38:29,969 | INFO     | 
[2026-04-22 01:39:28] 2026-04-22 05:38:29,970 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-04-22 01:39:28] 2026-04-22 05:38:30,214 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-22 01:39:28] 2026-04-22 05:38:30,215 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-22 01:39:28] 2026-04-22 05:38:30,215 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-22 01:39:28] 2026-04-22 05:38:30,215 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-22 01:39:28] 2026-04-22 05:38:30,215 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-22 01:39:28] 2026-04-22 05:38:30,215 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-22 01:39:28] 2026-04-22 05:38:30,215 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-22 01:39:28] 2026-04-22 05:38:30,215 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-22 01:39:28] 2026-04-22 05:38:30,216 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-22 01:39:28] 2026-04-22 05:38:30,216 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-22 01:39:28] 2026-04-22 05:38:30,216 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-22 01:39:28] 2026-04-22 05:38:30,216 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-22 01:39:28] 2026-04-22 05:38:30,216 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-22 01:39:28] 2026-04-22 05:38:30,216 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-22 01:39:28] 2026-04-22 05:38:30,216 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-22 01:39:28] 2026-04-22 05:38:30,217 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-22 01:39:28] 2026-04-22 05:38:30,217 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-22 01:39:28] 2026-04-22 05:38:30,217 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-22 01:39:28] 2026-04-22 05:38:30,217 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-22 01:39:28] 2026-04-22 05:38:30,217 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-22 01:39:28] 2026-04-22 05:38:30,217 | INFO     | job 7105410468 has completed (purged errors)
[2026-04-22 01:39:28] 2026-04-22 05:38:30,217 | INFO     | overall cleanup function is called
[2026-04-22 01:39:28] 2026-04-22 05:38:31,301 | INFO     | --- collectZombieJob: --- 10, [3840630]
[2026-04-22 01:39:28] 2026-04-22 05:38:31,301 | INFO     | zombie collector waiting for pid 3840630
[2026-04-22 01:39:28] 2026-04-22 05:38:31,301 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-22 01:39:28] 2026-04-22 05:38:31,301 | INFO     | collected zombie processes
[2026-04-22 01:39:28] 2026-04-22 05:38:31,302 | INFO     | will attempt to kill all subprocesses of pid=3840630
[2026-04-22 01:39:28] 2026-04-22 05:38:33,208 | INFO     | process IDs to be killed: [3840630] (in reverse order)
[2026-04-22 01:39:28] 2026-04-22 05:38:34,134 | WARNING  | found no corresponding commands to process id(s)
[2026-04-22 01:39:28] 2026-04-22 05:38:34,134 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-22 01:39:28] 2026-04-22 05:38:34,232 | INFO     | did not find any defunct processes belonging to 3840630
[2026-04-22 01:39:28] 2026-04-22 05:38:34,351 | INFO     | did not find any defunct processes belonging to 3840630
[2026-04-22 01:39:28] 2026-04-22 05:38:34,351 | INFO     | Ready for new job
[2026-04-22 01:39:28] 2026-04-22 05:38:34,354 | INFO     | **************************************
[2026-04-22 01:39:28] 2026-04-22 05:38:34,354 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-22 01:39:28] 2026-04-22 05:38:34,354 | INFO     | **************************************
[2026-04-22 01:39:28] 2026-04-22 05:38:34,355 | INFO     | 
[2026-04-22 01:39:28] 2026-04-22 05:38:34,402 | INFO     | architecture information:
[2026-04-22 01:39:28] 2026-04-22 05:38:34,425 | INFO     | executing command: cat /etc/os-release
[2026-04-22 01:39:28] 2026-04-22 05:38:34,597 | INFO     | cat /etc/os-release:
[2026-04-22 01:39:28] NAME="CentOS Linux"
[2026-04-22 01:39:28] VERSION="7 (Core)"
[2026-04-22 01:39:28] ID="centos"
[2026-04-22 01:39:28] ID_LIKE="rhel fedora"
[2026-04-22 01:39:28] VERSION_ID="7"
[2026-04-22 01:39:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-22 01:39:28] ANSI_COLOR="0;31"
[2026-04-22 01:39:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-22 01:39:28] HOME_URL="https://www.centos.org/"
[2026-04-22 01:39:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-22 01:39:28] 
[2026-04-22 01:39:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-22 01:39:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-22 01:39:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-22 01:39:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-22 01:39:28] 
[2026-04-22 01:39:28] 2026-04-22 05:38:34,598 | INFO     | **************************************
[2026-04-22 01:39:28] 2026-04-22 05:38:35,101 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-04-22 01:39:28] 2026-04-22 05:38:35,197 | INFO     | sufficient remaining disk space (67856498688 B)
[2026-04-22 01:39:28] 2026-04-22 05:38:35,198 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-22 01:39:28] 2026-04-22 05:38:35,198 | INFO     | current server update state: UPDATING_FINAL
[2026-04-22 01:39:28] 2026-04-22 05:38:35,198 | INFO     | update_server=False
[2026-04-22 01:39:28] 2026-04-22 05:38:35,198 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-22 01:39:28] 2026-04-22 05:38:35,198 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-22 01:39:28] 2026-04-22 05:38:35,198 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-22 01:39:28] 2026-04-22 05:38:35,228 | INFO     | all data control threads have been joined
[2026-04-22 01:39:28] 2026-04-22 05:38:35,664 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-22 01:39:28] 2026-04-22 05:38:35,996 | INFO     | all payload control threads have been joined
[2026-04-22 01:39:28] 2026-04-22 05:38:36,184 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-22 01:39:28] 2026-04-22 05:38:36,184 | INFO     | aborting loop
[2026-04-22 01:39:28] 2026-04-22 05:38:36,206 | INFO     | [job] retrieve thread has finished
[2026-04-22 01:39:28] 2026-04-22 05:38:36,218 | INFO     | [job] queue monitor thread has finished
[2026-04-22 01:39:28] 2026-04-22 05:38:36,299 | INFO     | [data] control thread has finished
[2026-04-22 01:39:28] 2026-04-22 05:38:36,307 | INFO     | [payload] failed_post thread has finished
[2026-04-22 01:39:28] 2026-04-22 05:38:36,611 | INFO     | [payload] execute_payloads thread has finished
[2026-04-22 01:39:28] 2026-04-22 05:38:36,709 | INFO     | all job control threads have been joined
[2026-04-22 01:39:28] 2026-04-22 05:38:36,950 | INFO     | [data] copytool_in thread has finished
[2026-04-22 01:39:28] 2026-04-22 05:38:37,002 | INFO     | [payload] control thread has finished
[2026-04-22 01:39:28] 2026-04-22 05:38:37,168 | INFO     | [payload] validate_pre thread has finished
[2026-04-22 01:39:28] 2026-04-22 05:38:37,190 | INFO     | [job] job monitor thread has finished
[2026-04-22 01:39:28] 2026-04-22 05:38:37,199 | INFO     | [job] create_data_payload thread has finished
[2026-04-22 01:39:28] 2026-04-22 05:38:37,439 | INFO     | [job] validate thread has finished
[2026-04-22 01:39:28] 2026-04-22 05:38:37,444 | INFO     | [payload] validate_post thread has finished
[2026-04-22 01:39:28] 2026-04-22 05:38:37,449 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-22 01:39:28] 2026-04-22 05:38:37,671 | INFO     | [data] copytool_out thread has finished
[2026-04-22 01:39:28] 2026-04-22 05:38:37,715 | INFO     | [job] control thread has finished
[2026-04-22 01:39:28] 2026-04-22 05:38:39,015 | INFO     | [monitor] cgroup control has ended
[2026-04-22 01:39:28] 2026-04-22 05:38:39,239 | INFO     | [data] queue_monitor thread has finished
[2026-04-22 01:39:28] 2026-04-22 05:38:40,512 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140510384953152)>', '<ExcThread(monitor, started 140509897017088)>']
[2026-04-22 01:39:28] 2026-04-22 05:38:45,538 | INFO     | all workflow threads have been joined
[2026-04-22 01:39:28] 2026-04-22 05:38:45,538 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-22 01:39:28] 2026-04-22 05:38:45,591 | INFO     | traces error code: 0
[2026-04-22 01:39:28] 2026-04-22 05:38:45,591 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-22 01:39:28] 2026-04-22 05:39:04,696 | INFO     | PID=3831136 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-22 01:39:28] 2026-04-22 05:39:04,719 | INFO     | .. there are 20 such processes running
[2026-04-22 01:39:28] 2026-04-22 05:39:04,720 | INFO     | found 0 job(s) in 20 queues
[2026-04-22 01:39:28] 2026-04-22 05:39:04,720 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-22 01:39:28] 2026-04-22 05:39:04,720 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-22 01:39:28] 2026-04-22 05:39:04,721 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-22 01:39:28] 2026-04-22 05:39:04,721 | INFO     | [monitor] control thread has ended
[2026-04-22 01:39:28] 2026-04-22 05:39:06,662 [wrapper] ==== pilot stdout END ====
[2026-04-22 01:39:28] 2026-04-22 05:39:06,717 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-22 01:39:28] 2026-04-22 05:39:06,777 [wrapper] pilotpid: 3831136
[2026-04-22 01:39:28] 2026-04-22 05:39:06,805 [wrapper] Pilot exit status: 0
[2026-04-22 01:39:28] 2026-04-22 05:39:06,962 [wrapper] pandaids: 7105410468
[2026-04-22 01:39:28] 2026-04-22 05:39:07,520 [wrapper] cleanup supervisor_pilot 2013624 3831137
[2026-04-22 01:39:28] 2026-04-22 05:39:07,541 [wrapper] Test setup, not cleaning
[2026-04-22 01:39:28] 2026-04-22 05:39:07,557 [wrapper] apfmon messages muted
[2026-04-22 01:39:28] 2026-04-22 05:39:07,572 [wrapper] ==== wrapper stdout END ====
[2026-04-22 01:39:28] 2026-04-22 05:39:07,598 [wrapper] ==== wrapper stderr END ====
[2026-04-22 01:39:28]  *** Error codes and diagnostics ***
[2026-04-22 01:39:28]     "exeErrorCode": 0,
[2026-04-22 01:39:28]     "pilotErrorCode": 0,
[2026-04-22 01:39:28]  *** Listing of results directory ***
[2026-04-22 01:39:28] total 2460292
[2026-04-22 01:39:28] -rwx------. 1 boincer umatlas      36322 Apr 21 07:06 runpilot2-wrapper.sh
[2026-04-22 01:39:28] -rw-r--r--. 1 boincer umatlas     644190 Apr 21 08:13 pilot3.tar.gz
[2026-04-22 01:39:28] -rw-r--r--. 1 boincer umatlas       5094 Apr 21 08:29 queuedata.json
[2026-04-22 01:39:28] -rw-r--r--. 1 boincer umatlas        100 Apr 21 13:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-22 01:39:28] -rwxr-xr-x. 1 boincer umatlas       7986 Apr 21 13:51 run_atlas
[2026-04-22 01:39:28] -rw-r--r--. 1 boincer umatlas        105 Apr 21 13:51 job.xml
[2026-04-22 01:39:28] -rw-r--r--. 2 boincer umatlas 2235290498 Apr 21 13:51 EVNT.49820242._000031.pool.root.1
[2026-04-22 01:39:28] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 13:51 start_atlas.sh
[2026-04-22 01:39:28] drwxrwx--x. 2 boincer umatlas       4096 Apr 21 13:51 shared
[2026-04-22 01:39:28] -rw-r--r--. 2 boincer umatlas     656921 Apr 21 13:51 input.tar.gz
[2026-04-22 01:39:28] -rw-r--r--. 1 boincer umatlas          0 Apr 21 13:51 boinc_lockfile
[2026-04-22 01:39:28] -rw-r--r--. 1 boincer umatlas       2550 Apr 21 13:51 pandaJob.out
[2026-04-22 01:39:28] -rw-------. 1 boincer umatlas         57 Apr 21 13:51 setup.sh.local
[2026-04-22 01:39:28] -rw-------. 1 boincer umatlas     994998 Apr 21 13:52 agis_schedconf.cvmfs.json
[2026-04-22 01:39:28] -rw-------. 1 boincer umatlas        439 Apr 21 13:53 workernode_map.json
[2026-04-22 01:39:28] drwx------. 5 boincer umatlas       4096 Apr 21 13:53 pilot3
[2026-04-22 01:39:28] -rw-------. 1 boincer umatlas  271881563 Apr 22 01:35 HITS.49820244._014678.pool.root.1
[2026-04-22 01:39:28] -rw-r--r--. 1 boincer umatlas        490 Apr 22 01:35 boinc_task_state.xml
[2026-04-22 01:39:28] -rw-r--r--. 1 boincer umatlas       6575 Apr 22 01:36 init_data.xml
[2026-04-22 01:39:28] -rw-------. 1 boincer umatlas       1057 Apr 22 01:38 memory_monitor_summary.json
[2026-04-22 01:39:28] -rw-------. 1 boincer umatlas    1509089 Apr 22 01:38 agis_ddmendpoints.agis.ALL.json
[2026-04-22 01:39:28] -rw-------. 1 boincer umatlas     667573 Apr 22 01:38 log.49820244._014678.job.log.tgz.1
[2026-04-22 01:39:28] -rw-------. 1 boincer umatlas       6429 Apr 22 01:38 heartbeat_new.json
[2026-04-22 01:39:28] -rw-------. 1 boincer umatlas       6320 Apr 22 01:38 heartbeat.json
[2026-04-22 01:39:28] -rw-------. 1 boincer umatlas        823 Apr 22 01:39 pilotlog.txt
[2026-04-22 01:39:28] -rw-------. 1 boincer umatlas         95 Apr 22 01:39 pilot_heartbeat.json
[2026-04-22 01:39:28] -rw-------. 1 boincer umatlas    3387793 Apr 22 01:39 log.49820244._014678.job.log.1
[2026-04-22 01:39:28] -rw-------. 1 boincer umatlas        357 Apr 22 01:39 output.list
[2026-04-22 01:39:28] -rw-r--r--. 1 boincer umatlas        410 Apr 22 01:39 runtime_log
[2026-04-22 01:39:28] -rw-------. 1 boincer umatlas    4075520 Apr 22 01:39 result.tar.gz
[2026-04-22 01:39:28] -rw-r--r--. 1 boincer umatlas       8956 Apr 22 01:39 runtime_log.err
[2026-04-22 01:39:28] -rw-------. 1 boincer umatlas        662 Apr 22 01:39 5a248a02ed49.diag
[2026-04-22 01:39:28] -rw-r--r--. 1 boincer umatlas       8192 Apr 22 01:39 boinc_mmap_file
[2026-04-22 01:39:28] -rw-r--r--. 1 boincer umatlas         28 Apr 22 01:39 wrapper_checkpoint.txt
[2026-04-22 01:39:28] -rw-r--r--. 1 boincer umatlas      21342 Apr 22 01:39 stderr.txt
[2026-04-22 01:39:28] HITS file was successfully produced:
[2026-04-22 01:39:28] -rw-------. 1 boincer umatlas 271881563 Apr 22 01:35 shared/HITS.pool.root.1
[2026-04-22 01:39:28]  *** Contents of shared directory: ***
[2026-04-22 01:39:28] total 2453064
[2026-04-22 01:39:28] -rw-r--r--. 2 boincer umatlas 2235290498 Apr 21 13:51 ATLAS.root_0
[2026-04-22 01:39:28] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 13:51 start_atlas.sh
[2026-04-22 01:39:28] -rw-r--r--. 2 boincer umatlas     656921 Apr 21 13:51 input.tar.gz
[2026-04-22 01:39:28] -rw-------. 1 boincer umatlas  271881563 Apr 22 01:35 HITS.pool.root.1
[2026-04-22 01:39:28] -rw-------. 1 boincer umatlas    4075520 Apr 22 01:39 result.tar.gz
01:39:30 (3826298): run_atlas exited; CPU time 86781.436073
01:39:30 (3826298): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN