Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:49:48 (2596997): wrapper (7.7.26015): starting
13:49:48 (2596997): wrapper: running run_atlas (--nthreads 9)
[2026-04-21 13:49:48] Arguments: --nthreads 9
[2026-04-21 13:49:48] Threads: 9
[2026-04-21 13:49:48] Checking for CVMFS
[2026-04-21 13:49:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-21 13:49:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-21 13:49:49] Running cvmfs_config stat atlas.cern.ch
[2026-04-21 13:49:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-21 13:49:49] 2.13.3.0 1513861 109279 360040 158698 3 707 31078975 32935937 17438 16776704 0 434894021 99.605 523336743 31178 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-21 13:49:49] CVMFS is ok
[2026-04-21 13:49:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 13:49:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 13:49:49] Further information can be found at the LHC@home message board.
[2026-04-21 13:49:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 13:49:49] Checking for apptainer binary...
[2026-04-21 13:49:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-21 13:49:49] Running /usr/bin/apptainer --version
[2026-04-21 13:49:49] apptainer version 1.4.5-2.el9
[2026-04-21 13:49:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 13:49:50] c6-12-29-4.aglt2.org
[2026-04-21 13:49:50] apptainer works
[2026-04-21 13:49:50] Set ATHENA_PROC_NUMBER=9
[2026-04-21 13:49:50] Set ATHENA_CORE_NUMBER=9
[2026-04-21 13:49:50] Starting ATLAS job with PandaID=7105404780
[2026-04-21 13:49:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-21 20:46:14]  *** The last 200 lines of the pilot log: ***
[2026-04-21 20:46:14] 2026-04-22 00:45:13,963 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-7105404780/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 20:46:14] 2026-04-22 00:45:13,964 | INFO     | extracted standard info from prmon json
[2026-04-21 20:46:14] 2026-04-22 00:45:13,964 | INFO     | extracted standard memory fields from prmon json
[2026-04-21 20:46:14] 2026-04-22 00:45:13,964 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-21 20:46:14] 2026-04-22 00:45:13,964 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-21 20:46:14] 2026-04-22 00:45:13,992 | INFO     | fitting pss+swap vs Time
[2026-04-21 20:46:14] 2026-04-22 00:45:13,992 | INFO     | sum of square deviations: 21060026116.58584
[2026-04-21 20:46:14] 2026-04-22 00:45:13,997 | INFO     | sum of deviations: 108726175102.81369
[2026-04-21 20:46:14] 2026-04-22 00:45:13,997 | INFO     | mean x (centered): 0.0
[2026-04-21 20:46:14] 2026-04-22 00:45:13,997 | INFO     | mean y: 2606476.4215686275
[2026-04-21 20:46:14] 2026-04-22 00:45:13,997 | INFO     | intersect: 2606476.4215686275
[2026-04-21 20:46:14] 2026-04-22 00:45:13,998 | INFO     | chi2: 2.331699250734885
[2026-04-21 20:46:14] 2026-04-22 00:45:13,998 | INFO     | sum of square deviations: 20295228551.493683
[2026-04-21 20:46:14] 2026-04-22 00:45:14,002 | INFO     | sum of deviations: 133739746013.3548
[2026-04-21 20:46:14] 2026-04-22 00:45:14,002 | INFO     | mean x (centered): 0.0
[2026-04-21 20:46:14] 2026-04-22 00:45:14,002 | INFO     | mean y: 2611410.193548387
[2026-04-21 20:46:14] 2026-04-22 00:45:14,002 | INFO     | intersect: 2611410.193548387
[2026-04-21 20:46:14] 2026-04-22 00:45:14,041 | INFO     | chi2: 1.6138882482553876
[2026-04-21 20:46:14] 2026-04-22 00:45:14,041 | INFO     | current chi2=1.6138882482553876 (change=30.784887984728897 %)
[2026-04-21 20:46:14] 2026-04-22 00:45:14,042 | INFO     | sum of square deviations: 19549175523.899536
[2026-04-21 20:46:14] 2026-04-22 00:45:14,070 | INFO     | sum of deviations: 131431881430.06044
[2026-04-21 20:46:14] 2026-04-22 00:45:14,070 | INFO     | mean x (centered): 0.0
[2026-04-21 20:46:14] 2026-04-22 00:45:14,070 | INFO     | mean y: 2610938.4170854273
[2026-04-21 20:46:14] 2026-04-22 00:45:14,070 | INFO     | intersect: 2610938.4170854273
[2026-04-21 20:46:14] 2026-04-22 00:45:14,071 | INFO     | chi2: 1.613692752082534
[2026-04-21 20:46:14] 2026-04-22 00:45:14,071 | INFO     | current chi2=1.613692752082534 (change=0.012113364916373163 %)
[2026-04-21 20:46:14] 2026-04-22 00:45:14,071 | INFO     | right removable region: 397
[2026-04-21 20:46:14] 2026-04-22 00:45:14,072 | INFO     | sum of square deviations: 20295195001.493683
[2026-04-21 20:46:14] 2026-04-22 00:45:14,076 | INFO     | sum of deviations: 34423915467.65268
[2026-04-21 20:46:14] 2026-04-22 00:45:14,076 | INFO     | mean x (centered): 0.0
[2026-04-21 20:46:14] 2026-04-22 00:45:14,076 | INFO     | mean y: 2621229.642679901
[2026-04-21 20:46:14] 2026-04-22 00:45:14,076 | INFO     | intersect: 2621229.642679901
[2026-04-21 20:46:14] 2026-04-22 00:45:14,077 | INFO     | chi2: 0.8383533798551532
[2026-04-21 20:46:14] 2026-04-22 00:45:14,077 | INFO     | current chi2=0.8383533798551532 (change=64.04538966202745 %)
[2026-04-21 20:46:14] 2026-04-22 00:45:14,077 | INFO     | sum of square deviations: 19549108423.899536
[2026-04-21 20:46:14] 2026-04-22 00:45:14,081 | INFO     | sum of deviations: 12488964805.989887
[2026-04-21 20:46:14] 2026-04-22 00:45:14,081 | INFO     | mean x (centered): 0.0
[2026-04-21 20:46:14] 2026-04-22 00:45:14,082 | INFO     | mean y: 2625713.2638190957
[2026-04-21 20:46:14] 2026-04-22 00:45:14,082 | INFO     | intersect: 2625713.2638190957
[2026-04-21 20:46:14] 2026-04-22 00:45:14,082 | INFO     | chi2: 0.7549204422856254
[2026-04-21 20:46:14] 2026-04-22 00:45:14,082 | INFO     | current chi2=0.7549204422856254 (change=9.952001098145868 %)
[2026-04-21 20:46:14] 2026-04-22 00:45:14,083 | INFO     | left removable region: 10
[2026-04-21 20:46:14] 2026-04-22 00:45:14,083 | INFO     | sum of square deviations: 17972626467.183365
[2026-04-21 20:46:14] 2026-04-22 00:45:14,087 | INFO     | sum of deviations: 36772342758.83723
[2026-04-21 20:46:14] 2026-04-22 00:45:14,087 | INFO     | mean x (centered): 0.0
[2026-04-21 20:46:14] 2026-04-22 00:45:14,087 | INFO     | mean y: 2630738.930232558
[2026-04-21 20:46:14] 2026-04-22 00:45:14,087 | INFO     | intersect: 2630738.930232558
[2026-04-21 20:46:14] 2026-04-22 00:45:14,088 | INFO     | chi2: 0.028975050672321898
[2026-04-21 20:46:14] 2026-04-22 00:45:14,088 | INFO     | current memory leak: 2.05 B/s (using 387 data points, chi2=0.03)
[2026-04-21 20:46:14] 2026-04-22 00:45:14,090 | INFO     | could have reported an average CPU frequency of 2634 MHz (17 samples)
[2026-04-21 20:46:14] 2026-04-22 00:45:14,090 | INFO     | ..............................
[2026-04-21 20:46:14] 2026-04-22 00:45:14,090 | INFO     | . Timing measurements:
[2026-04-21 20:46:14] 2026-04-22 00:45:14,090 | INFO     | . get job = 0 s
[2026-04-21 20:46:14] 2026-04-22 00:45:14,090 | INFO     | . initial setup = 11 s
[2026-04-21 20:46:14] 2026-04-22 00:45:14,090 | INFO     | . payload setup = 15 s
[2026-04-21 20:46:14] 2026-04-22 00:45:14,090 | INFO     | . stage-in = 0 s
[2026-04-21 20:46:14] 2026-04-22 00:45:14,090 | INFO     | . payload execution = 24850 s
[2026-04-21 20:46:14] 2026-04-22 00:45:14,091 | INFO     | . stage-out = 4 s
[2026-04-21 20:46:14] 2026-04-22 00:45:14,091 | INFO     | . log creation = 0 s
[2026-04-21 20:46:14] 2026-04-22 00:45:14,091 | INFO     | ..............................
[2026-04-21 20:46:14] 2026-04-22 00:45:14,339 | INFO     | 
[2026-04-21 20:46:14] 2026-04-22 00:45:14,339 | INFO     | job summary report
[2026-04-21 20:46:14] 2026-04-22 00:45:14,340 | INFO     | --------------------------------------------------
[2026-04-21 20:46:14] 2026-04-22 00:45:14,340 | INFO     | PanDA job id: 7105404780
[2026-04-21 20:46:14] 2026-04-22 00:45:14,340 | INFO     | task id: 49820244
[2026-04-21 20:46:14] 2026-04-22 00:45:14,340 | INFO     | errors: (none)
[2026-04-21 20:46:14] 2026-04-22 00:45:14,340 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-21 20:46:14] 2026-04-22 00:45:14,340 | INFO     | pilot state: finished 
[2026-04-21 20:46:14] 2026-04-22 00:45:14,340 | INFO     | transexitcode: 0
[2026-04-21 20:46:14] 2026-04-22 00:45:14,340 | INFO     | exeerrorcode: 0
[2026-04-21 20:46:14] 2026-04-22 00:45:14,340 | INFO     | exeerrordiag: 
[2026-04-21 20:46:14] 2026-04-22 00:45:14,340 | INFO     | exitcode: 0
[2026-04-21 20:46:14] 2026-04-22 00:45:14,340 | INFO     | exitmsg: OK
[2026-04-21 20:46:14] 2026-04-22 00:45:14,340 | INFO     | cpuconsumptiontime: 74188 s
[2026-04-21 20:46:14] 2026-04-22 00:45:14,340 | INFO     | nevents: 400
[2026-04-21 20:46:14] 2026-04-22 00:45:14,341 | INFO     | neventsw: 0
[2026-04-21 20:46:14] 2026-04-22 00:45:14,341 | INFO     | pid: 2607886
[2026-04-21 20:46:14] 2026-04-22 00:45:14,341 | INFO     | pgrp: 2607886
[2026-04-21 20:46:14] 2026-04-22 00:45:14,341 | INFO     | corecount: 9
[2026-04-21 20:46:14] 2026-04-22 00:45:14,341 | INFO     | event service: False
[2026-04-21 20:46:14] 2026-04-22 00:45:14,341 | INFO     | sizes: {0: 2273921, 1: 2274606, 2: 2276435, 12: 2276435, 24871: 2311795, 24876: 2320793, 24878: 2320977, 24879: 2321235}
[2026-04-21 20:46:14] 2026-04-22 00:45:14,341 | INFO     | --------------------------------------------------
[2026-04-21 20:46:14] 2026-04-22 00:45:14,341 | INFO     | 
[2026-04-21 20:46:14] 2026-04-22 00:45:14,341 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-04-21 20:46:14] 2026-04-22 00:45:14,423 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-21 20:46:14] 2026-04-22 00:45:14,423 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-21 20:46:14] 2026-04-22 00:45:14,423 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-21 20:46:14] 2026-04-22 00:45:14,423 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-21 20:46:14] 2026-04-22 00:45:14,423 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-21 20:46:14] 2026-04-22 00:45:14,423 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-21 20:46:14] 2026-04-22 00:45:14,423 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-21 20:46:14] 2026-04-22 00:45:14,423 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-21 20:46:14] 2026-04-22 00:45:14,424 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-21 20:46:14] 2026-04-22 00:45:14,424 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-21 20:46:14] 2026-04-22 00:45:14,424 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-21 20:46:14] 2026-04-22 00:45:14,424 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-21 20:46:14] 2026-04-22 00:45:14,424 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-21 20:46:14] 2026-04-22 00:45:14,424 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-21 20:46:14] 2026-04-22 00:45:14,424 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-21 20:46:14] 2026-04-22 00:45:14,424 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-21 20:46:14] 2026-04-22 00:45:14,424 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-21 20:46:14] 2026-04-22 00:45:14,424 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-21 20:46:14] 2026-04-22 00:45:14,424 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-21 20:46:14] 2026-04-22 00:45:14,424 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-21 20:46:14] 2026-04-22 00:45:14,425 | INFO     | job 7105404780 has completed (purged errors)
[2026-04-21 20:46:14] 2026-04-22 00:45:14,425 | INFO     | overall cleanup function is called
[2026-04-21 20:46:14] 2026-04-22 00:45:15,470 | INFO     | --- collectZombieJob: --- 10, [2607886]
[2026-04-21 20:46:14] 2026-04-22 00:45:15,471 | INFO     | zombie collector waiting for pid 2607886
[2026-04-21 20:46:14] 2026-04-22 00:45:15,471 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-21 20:46:14] 2026-04-22 00:45:15,471 | INFO     | collected zombie processes
[2026-04-21 20:46:14] 2026-04-22 00:45:15,471 | INFO     | will attempt to kill all subprocesses of pid=2607886
[2026-04-21 20:46:14] 2026-04-22 00:45:15,574 | INFO     | PID=2602645 has CPU usage=16.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-21 20:46:14] 2026-04-22 00:45:15,594 | INFO     | .. there are 23 such processes running
[2026-04-21 20:46:14] 2026-04-22 00:45:15,851 | INFO     | number of running child processes to parent process 2607886: 1
[2026-04-21 20:46:14] 2026-04-22 00:45:15,851 | INFO     | maximum number of monitored processes: 6
[2026-04-21 20:46:14] 2026-04-22 00:45:15,851 | INFO     | aborting job monitoring since job object (job id=7105404780) has expired
[2026-04-21 20:46:14] 2026-04-22 00:45:17,585 | INFO     | process IDs to be killed: [2607886] (in reverse order)
[2026-04-21 20:46:14] 2026-04-22 00:45:17,741 | WARNING  | found no corresponding commands to process id(s)
[2026-04-21 20:46:14] 2026-04-22 00:45:17,741 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-21 20:46:14] 2026-04-22 00:45:17,787 | INFO     | did not find any defunct processes belonging to 2607886
[2026-04-21 20:46:14] 2026-04-22 00:45:17,805 | INFO     | did not find any defunct processes belonging to 2607886
[2026-04-21 20:46:14] 2026-04-22 00:45:17,805 | INFO     | Ready for new job
[2026-04-21 20:46:14] 2026-04-22 00:45:17,808 | INFO     | **************************************
[2026-04-21 20:46:14] 2026-04-22 00:45:17,808 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-21 20:46:14] 2026-04-22 00:45:17,808 | INFO     | **************************************
[2026-04-21 20:46:14] 2026-04-22 00:45:17,808 | INFO     | 
[2026-04-21 20:46:14] 2026-04-22 00:45:17,814 | INFO     | architecture information:
[2026-04-21 20:46:14] 2026-04-22 00:45:17,814 | INFO     | executing command: cat /etc/os-release
[2026-04-21 20:46:14] 2026-04-22 00:45:17,837 | INFO     | cat /etc/os-release:
[2026-04-21 20:46:14] NAME="CentOS Linux"
[2026-04-21 20:46:14] VERSION="7 (Core)"
[2026-04-21 20:46:14] ID="centos"
[2026-04-21 20:46:14] ID_LIKE="rhel fedora"
[2026-04-21 20:46:14] VERSION_ID="7"
[2026-04-21 20:46:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-21 20:46:14] ANSI_COLOR="0;31"
[2026-04-21 20:46:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-21 20:46:14] HOME_URL="https://www.centos.org/"
[2026-04-21 20:46:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-21 20:46:14] 
[2026-04-21 20:46:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-21 20:46:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-21 20:46:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-21 20:46:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-21 20:46:14] 
[2026-04-21 20:46:14] 2026-04-22 00:45:17,837 | INFO     | **************************************
[2026-04-21 20:46:14] 2026-04-22 00:45:18,341 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-04-21 20:46:14] 2026-04-22 00:45:18,366 | INFO     | sufficient remaining disk space (73450651648 B)
[2026-04-21 20:46:14] 2026-04-22 00:45:18,366 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-21 20:46:14] 2026-04-22 00:45:18,366 | INFO     | current server update state: UPDATING_FINAL
[2026-04-21 20:46:14] 2026-04-22 00:45:18,366 | INFO     | update_server=False
[2026-04-21 20:46:14] 2026-04-22 00:45:18,366 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-21 20:46:14] 2026-04-22 00:45:18,683 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-21 20:46:14] 2026-04-22 00:45:18,768 | INFO     | all data control threads have been joined
[2026-04-21 20:46:14] 2026-04-22 00:45:19,113 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-21 20:46:14] 2026-04-22 00:45:19,281 | INFO     | all job control threads have been joined
[2026-04-21 20:46:14] 2026-04-22 00:45:19,283 | INFO     | all payload control threads have been joined
[2026-04-21 20:46:14] 2026-04-22 00:45:19,364 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-21 20:46:14] 2026-04-22 00:45:19,365 | INFO     | aborting loop
[2026-04-21 20:46:14] 2026-04-22 00:45:19,372 | INFO     | [job] retrieve thread has finished
[2026-04-21 20:46:14] 2026-04-22 00:45:19,378 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-21 20:46:14] 2026-04-22 00:45:19,379 | INFO     | [data] copytool_in thread has finished
[2026-04-21 20:46:14] 2026-04-22 00:45:19,774 | INFO     | [data] control thread has finished
[2026-04-21 20:46:14] 2026-04-22 00:45:19,972 | INFO     | [job] validate thread has finished
[2026-04-21 20:46:14] 2026-04-22 00:45:20,129 | INFO     | [payload] validate_post thread has finished
[2026-04-21 20:46:14] 2026-04-22 00:45:20,174 | INFO     | [payload] failed_post thread has finished
[2026-04-21 20:46:14] 2026-04-22 00:45:20,287 | INFO     | [job] control thread has finished
[2026-04-21 20:46:14] 2026-04-22 00:45:20,289 | INFO     | [payload] control thread has finished
[2026-04-21 20:46:14] 2026-04-22 00:45:20,370 | INFO     | [job] job monitor thread has finished
[2026-04-21 20:46:14] 2026-04-22 00:45:20,384 | INFO     | [job] queue monitor thread has finished
[2026-04-21 20:46:14] 2026-04-22 00:45:20,431 | INFO     | [payload] validate_pre thread has finished
[2026-04-21 20:46:14] 2026-04-22 00:45:20,614 | INFO     | [job] create_data_payload thread has finished
[2026-04-21 20:46:14] 2026-04-22 00:45:20,868 | INFO     | [payload] execute_payloads thread has finished
[2026-04-21 20:46:14] 2026-04-22 00:45:21,120 | INFO     | [data] copytool_out thread has finished
[2026-04-21 20:46:14] 2026-04-22 00:45:22,694 | INFO     | [data] queue_monitor thread has finished
[2026-04-21 20:46:14] 2026-04-22 00:45:28,578 | INFO     | job.realtimelogging is not enabled
[2026-04-21 20:46:14] 2026-04-22 00:45:29,584 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-21 20:46:14] 2026-04-22 00:45:48,809 | INFO     | PID=2602645 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-21 20:46:14] 2026-04-22 00:45:48,809 | INFO     | .. there are 23 such processes running
[2026-04-21 20:46:14] 2026-04-22 00:45:48,809 | INFO     | found 0 job(s) in 20 queues
[2026-04-21 20:46:14] 2026-04-22 00:45:48,809 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-21 20:46:14] 2026-04-22 00:45:48,809 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-21 20:46:14] 2026-04-22 00:46:07,366 | INFO     | [monitor] cgroup control has ended
[2026-04-21 20:46:14] 2026-04-22 00:46:08,489 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140678902241088)>', '<ExcThread(monitor, started 140678415767296)>']
[2026-04-21 20:46:14] 2026-04-22 00:46:08,962 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-21 20:46:14] 2026-04-22 00:46:08,963 | INFO     | [monitor] control thread has ended
[2026-04-21 20:46:14] 2026-04-22 00:46:13,515 | INFO     | all workflow threads have been joined
[2026-04-21 20:46:14] 2026-04-22 00:46:13,516 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-21 20:46:14] 2026-04-22 00:46:13,516 | INFO     | traces error code: 0
[2026-04-21 20:46:14] 2026-04-22 00:46:13,516 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-21 20:46:14] 2026-04-22 00:46:13,756 [wrapper] ==== pilot stdout END ====
[2026-04-21 20:46:14] 2026-04-22 00:46:13,759 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-21 20:46:14] 2026-04-22 00:46:13,761 [wrapper] pilotpid: 2602645
[2026-04-21 20:46:14] 2026-04-22 00:46:13,764 [wrapper] Pilot exit status: 0
[2026-04-21 20:46:14] 2026-04-22 00:46:13,843 [wrapper] pandaids: 7105404780
[2026-04-21 20:46:14] 2026-04-22 00:46:14,305 [wrapper] cleanup supervisor_pilot 3884410 2602646
[2026-04-21 20:46:14] 2026-04-22 00:46:14,323 [wrapper] Test setup, not cleaning
[2026-04-21 20:46:14] 2026-04-22 00:46:14,346 [wrapper] apfmon messages muted
[2026-04-21 20:46:14] 2026-04-22 00:46:14,370 [wrapper] ==== wrapper stdout END ====
[2026-04-21 20:46:14] 2026-04-22 00:46:14,413 [wrapper] ==== wrapper stderr END ====
[2026-04-21 20:46:14]  *** Error codes and diagnostics ***
[2026-04-21 20:46:14]     "exeErrorCode": 0,
[2026-04-21 20:46:14]     "pilotErrorCode": 0,
[2026-04-21 20:46:14]  *** Listing of results directory ***
[2026-04-21 20:46:14] total 2473300
[2026-04-21 20:46:14] -rwx------. 1 boincer umatlas      36322 Apr 21 07:06 runpilot2-wrapper.sh
[2026-04-21 20:46:14] -rw-r--r--. 1 boincer umatlas     644190 Apr 21 08:13 pilot3.tar.gz
[2026-04-21 20:46:14] -rw-r--r--. 1 boincer umatlas       5094 Apr 21 08:29 queuedata.json
[2026-04-21 20:46:14] -rw-r--r--. 1 boincer umatlas        100 Apr 21 13:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-21 20:46:14] -rwxr-xr-x. 1 boincer umatlas       7986 Apr 21 13:49 run_atlas
[2026-04-21 20:46:14] -rw-r--r--. 1 boincer umatlas        105 Apr 21 13:49 job.xml
[2026-04-21 20:46:14] -rw-r--r--. 2 boincer umatlas 2251800021 Apr 21 13:49 EVNT.49820242._000028.pool.root.1
[2026-04-21 20:46:14] drwxrwx--x. 2 boincer umatlas       4096 Apr 21 13:49 shared
[2026-04-21 20:46:14] -rw-r--r--. 2 boincer umatlas     656924 Apr 21 13:49 input.tar.gz
[2026-04-21 20:46:14] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 13:49 start_atlas.sh
[2026-04-21 20:46:14] -rw-r--r--. 1 boincer umatlas          0 Apr 21 13:49 boinc_lockfile
[2026-04-21 20:46:14] -rw-r--r--. 1 boincer umatlas       2551 Apr 21 13:49 pandaJob.out
[2026-04-21 20:46:14] -rw-------. 1 boincer umatlas         57 Apr 21 13:49 setup.sh.local
[2026-04-21 20:46:14] -rw-------. 1 boincer umatlas     994998 Apr 21 13:50 agis_schedconf.cvmfs.json
[2026-04-21 20:46:14] -rw-------. 1 boincer umatlas        443 Apr 21 13:50 workernode_map.json
[2026-04-21 20:46:14] drwx------. 5 boincer umatlas       4096 Apr 21 13:50 pilot3
[2026-04-21 20:46:14] -rw-r--r--. 1 boincer umatlas       6794 Apr 21 20:37 init_data.xml
[2026-04-21 20:46:14] -rw-------. 1 boincer umatlas  271595768 Apr 21 20:43 HITS.49820244._014598.pool.root.1
[2026-04-21 20:46:14] -rw-r--r--. 1 boincer umatlas        489 Apr 21 20:43 boinc_task_state.xml
[2026-04-21 20:46:14] -rw-------. 1 boincer umatlas       1055 Apr 21 20:45 memory_monitor_summary.json
[2026-04-21 20:46:14] -rw-------. 1 boincer umatlas    1509089 Apr 21 20:45 agis_ddmendpoints.agis.ALL.json
[2026-04-21 20:46:14] -rw-------. 1 boincer umatlas     567543 Apr 21 20:45 log.49820244._014598.job.log.tgz.1
[2026-04-21 20:46:14] -rw-------. 1 boincer umatlas       6437 Apr 21 20:45 heartbeat_new.json
[2026-04-21 20:46:14] -rw-------. 1 boincer umatlas       6328 Apr 21 20:45 heartbeat.json
[2026-04-21 20:46:14] -rw-------. 1 boincer umatlas         95 Apr 21 20:45 pilot_heartbeat.json
[2026-04-21 20:46:14] -rw-r--r--. 1 boincer umatlas       8192 Apr 21 20:46 boinc_mmap_file
[2026-04-21 20:46:14] -rw-------. 1 boincer umatlas       4891 Apr 21 20:46 pilotlog.txt
[2026-04-21 20:46:14] -rw-------. 1 boincer umatlas    2038628 Apr 21 20:46 log.49820244._014598.job.log.1
[2026-04-21 20:46:14] -rw-r--r--. 1 boincer umatlas         28 Apr 21 20:46 wrapper_checkpoint.txt
[2026-04-21 20:46:14] -rw-------. 1 boincer umatlas        357 Apr 21 20:46 output.list
[2026-04-21 20:46:14] -rw-r--r--. 1 boincer umatlas        410 Apr 21 20:46 runtime_log
[2026-04-21 20:46:14] -rw-------. 1 boincer umatlas    2621440 Apr 21 20:46 result.tar.gz
[2026-04-21 20:46:14] -rw-r--r--. 1 boincer umatlas       8974 Apr 21 20:46 runtime_log.err
[2026-04-21 20:46:14] -rw-------. 1 boincer umatlas        661 Apr 21 20:46 5a1a9f8b35fd.diag
[2026-04-21 20:46:14] -rw-r--r--. 1 boincer umatlas      21144 Apr 21 20:46 stderr.txt
[2026-04-21 20:46:15] HITS file was successfully produced:
[2026-04-21 20:46:15] -rw-------. 1 boincer umatlas 271595768 Apr 21 20:43 shared/HITS.pool.root.1
[2026-04-21 20:46:15]  *** Contents of shared directory: ***
[2026-04-21 20:46:15] total 2467484
[2026-04-21 20:46:15] -rw-r--r--. 2 boincer umatlas 2251800021 Apr 21 13:49 ATLAS.root_0
[2026-04-21 20:46:15] -rw-r--r--. 2 boincer umatlas     656924 Apr 21 13:49 input.tar.gz
[2026-04-21 20:46:15] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 13:49 start_atlas.sh
[2026-04-21 20:46:15] -rw-------. 1 boincer umatlas  271595768 Apr 21 20:43 HITS.pool.root.1
[2026-04-21 20:46:15] -rw-------. 1 boincer umatlas    2621440 Apr 21 20:46 result.tar.gz
20:46:16 (2596997): run_atlas exited; CPU time 75444.635004
20:46:16 (2596997): called boinc_finish(0)

</stderr_txt>
]]>

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