Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:39:58 (400432): wrapper (7.7.26015): starting
13:39:58 (400432): wrapper: running run_atlas (--nthreads 9)
[2026-04-21 13:39:58] Arguments: --nthreads 9
[2026-04-21 13:39:58] Threads: 9
[2026-04-21 13:39:58] Checking for CVMFS
[2026-04-21 13:39:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-21 13:39:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-21 13:39:59] Running cvmfs_config stat atlas.cern.ch
[2026-04-21 13:40:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-21 13:40:00] 2.13.3.0 10955 170102 304028 158698 1 455 38915412 40960000 19885 16776704 0 395982651 99.708 393285912 34447 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-21 13:40:00] CVMFS is ok
[2026-04-21 13:40:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 13:40:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 13:40:00] Further information can be found at the LHC@home message board.
[2026-04-21 13:40:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 13:40:00] Checking for apptainer binary...
[2026-04-21 13:40:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-21 13:40:00] Running /usr/bin/apptainer --version
[2026-04-21 13:40:00] apptainer version 1.4.5-2.el9
[2026-04-21 13:40:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 13:40:01] c-211-33-1.aglt2.org
[2026-04-21 13:40:01] apptainer works
[2026-04-21 13:40:01] Set ATHENA_PROC_NUMBER=9
[2026-04-21 13:40:01] Set ATHENA_CORE_NUMBER=9
[2026-04-21 13:40:02] Starting ATLAS job with PandaID=7105350580
[2026-04-21 13:40:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-21 18:42:00]  *** The last 200 lines of the pilot log: ***
[2026-04-21 18:42:01] 2026-04-21 22:41:26,551 | INFO     | log transfer has been attempted: DONE
[2026-04-21 18:42:01] 2026-04-21 22:41:26,551 | INFO     | job 7105350580 has finished - writing final server update
[2026-04-21 18:42:01] 2026-04-21 22:41:26,551 | INFO     | total number of processed events: 400 (read)
[2026-04-21 18:42:01] 2026-04-21 22:41:26,589 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7105350580/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 18:42:01] 2026-04-21 22:41:26,589 | INFO     | extracted standard info from prmon json
[2026-04-21 18:42:01] 2026-04-21 22:41:26,590 | INFO     | extracted standard memory fields from prmon json
[2026-04-21 18:42:01] 2026-04-21 22:41:26,594 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-21 18:42:01] 2026-04-21 22:41:26,594 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-21 18:42:01] 2026-04-21 22:41:26,603 | INFO     | fitting pss+swap vs Time
[2026-04-21 18:42:01] 2026-04-21 22:41:26,604 | INFO     | sum of square deviations: 7960324608.745745
[2026-04-21 18:42:01] 2026-04-21 22:41:26,614 | INFO     | sum of deviations: 30895264750.220272
[2026-04-21 18:42:01] 2026-04-21 22:41:26,615 | INFO     | mean x (centered): 0.0
[2026-04-21 18:42:01] 2026-04-21 22:41:26,615 | INFO     | mean y: 2488014.1050847457
[2026-04-21 18:42:01] 2026-04-21 22:41:26,615 | INFO     | intersect: 2488014.1050847457
[2026-04-21 18:42:01] 2026-04-21 22:41:26,615 | INFO     | chi2: 4.662274485118016
[2026-04-21 18:42:01] 2026-04-21 22:41:26,616 | INFO     | sum of square deviations: 7562389736.068973
[2026-04-21 18:42:01] 2026-04-21 22:41:26,664 | INFO     | sum of deviations: 85689437905.37933
[2026-04-21 18:42:01] 2026-04-21 22:41:26,664 | INFO     | mean x (centered): 0.0
[2026-04-21 18:42:01] 2026-04-21 22:41:26,664 | INFO     | mean y: 2508863.6931034485
[2026-04-21 18:42:01] 2026-04-21 22:41:26,665 | INFO     | intersect: 2508863.6931034485
[2026-04-21 18:42:01] 2026-04-21 22:41:26,665 | INFO     | chi2: 2.5617692108020016
[2026-04-21 18:42:01] 2026-04-21 22:41:26,665 | INFO     | current chi2=2.5617692108020016 (change=45.05323058564718 %)
[2026-04-21 18:42:01] 2026-04-21 22:41:26,666 | INFO     | sum of square deviations: 7177943488.385994
[2026-04-21 18:42:01] 2026-04-21 22:41:26,706 | INFO     | sum of deviations: 84045572724.92981
[2026-04-21 18:42:01] 2026-04-21 22:41:26,706 | INFO     | mean x (centered): 0.0
[2026-04-21 18:42:01] 2026-04-21 22:41:26,707 | INFO     | mean y: 2508211.5649122805
[2026-04-21 18:42:01] 2026-04-21 22:41:26,707 | INFO     | intersect: 2508211.5649122805
[2026-04-21 18:42:01] 2026-04-21 22:41:26,707 | INFO     | chi2: 2.562726434088203
[2026-04-21 18:42:01] 2026-04-21 22:41:26,707 | INFO     | current chi2=2.562726434088203 (change=-0.037365711250075935 %)
[2026-04-21 18:42:01] 2026-04-21 22:41:26,707 | INFO     | right removable region: 284
[2026-04-21 18:42:01] 2026-04-21 22:41:26,708 | INFO     | sum of square deviations: 7562356186.068978
[2026-04-21 18:42:01] 2026-04-21 22:41:26,777 | INFO     | sum of deviations: -38911181745.344826
[2026-04-21 18:42:01] 2026-04-21 22:41:26,777 | INFO     | mean x (centered): 0.0
[2026-04-21 18:42:01] 2026-04-21 22:41:26,777 | INFO     | mean y: 2514643.751724138
[2026-04-21 18:42:01] 2026-04-21 22:41:26,810 | INFO     | intersect: 2514643.751724138
[2026-04-21 18:42:01] 2026-04-21 22:41:26,810 | INFO     | chi2: 2.234059198882126
[2026-04-21 18:42:01] 2026-04-21 22:41:26,811 | INFO     | current chi2=2.234059198882126 (change=52.08220352505531 %)
[2026-04-21 18:42:01] 2026-04-21 22:41:26,811 | INFO     | sum of square deviations: 7177876388.385996
[2026-04-21 18:42:01] 2026-04-21 22:41:26,813 | INFO     | sum of deviations: -48779850870.24562
[2026-04-21 18:42:01] 2026-04-21 22:41:26,813 | INFO     | mean x (centered): 0.0
[2026-04-21 18:42:01] 2026-04-21 22:41:26,813 | INFO     | mean y: 2518530.0771929827
[2026-04-21 18:42:01] 2026-04-21 22:41:26,813 | INFO     | intersect: 2518530.0771929827
[2026-04-21 18:42:01] 2026-04-21 22:41:26,836 | INFO     | chi2: 2.1691473079993853
[2026-04-21 18:42:01] 2026-04-21 22:41:26,836 | INFO     | current chi2=2.1691473079993853 (change=2.9055582285026884 %)
[2026-04-21 18:42:01] 2026-04-21 22:41:26,836 | INFO     | left removable region: 10
[2026-04-21 18:42:01] 2026-04-21 22:41:26,837 | INFO     | sum of square deviations: 6378428535.459807
[2026-04-21 18:42:01] 2026-04-21 22:41:26,887 | INFO     | sum of deviations: 5221469705.255477
[2026-04-21 18:42:01] 2026-04-21 22:41:26,887 | INFO     | mean x (centered): 0.0
[2026-04-21 18:42:01] 2026-04-21 22:41:26,887 | INFO     | mean y: 2540551.722627737
[2026-04-21 18:42:01] 2026-04-21 22:41:26,887 | INFO     | intersect: 2540551.722627737
[2026-04-21 18:42:01] 2026-04-21 22:41:26,888 | INFO     | chi2: 0.007938853446214623
[2026-04-21 18:42:01] 2026-04-21 22:41:26,888 | INFO     | current memory leak: 0.82 B/s (using 274 data points, chi2=0.01)
[2026-04-21 18:42:01] 2026-04-21 22:41:26,888 | INFO     | could have reported an average CPU frequency of 2668 MHz (13 samples)
[2026-04-21 18:42:01] 2026-04-21 22:41:26,889 | INFO     | ..............................
[2026-04-21 18:42:01] 2026-04-21 22:41:26,889 | INFO     | . Timing measurements:
[2026-04-21 18:42:01] 2026-04-21 22:41:26,889 | INFO     | . get job = 0 s
[2026-04-21 18:42:01] 2026-04-21 22:41:26,889 | INFO     | . initial setup = 29 s
[2026-04-21 18:42:01] 2026-04-21 22:41:26,889 | INFO     | . payload setup = 44 s
[2026-04-21 18:42:01] 2026-04-21 22:41:26,889 | INFO     | . stage-in = 0 s
[2026-04-21 18:42:01] 2026-04-21 22:41:26,889 | INFO     | . payload execution = 17958 s
[2026-04-21 18:42:01] 2026-04-21 22:41:26,889 | INFO     | . stage-out = 3 s
[2026-04-21 18:42:01] 2026-04-21 22:41:26,889 | INFO     | . log creation = 0 s
[2026-04-21 18:42:01] 2026-04-21 22:41:26,889 | INFO     | ..............................
[2026-04-21 18:42:01] 2026-04-21 22:41:27,217 | INFO     | 
[2026-04-21 18:42:01] 2026-04-21 22:41:27,218 | INFO     | job summary report
[2026-04-21 18:42:01] 2026-04-21 22:41:27,218 | INFO     | --------------------------------------------------
[2026-04-21 18:42:01] 2026-04-21 22:41:27,218 | INFO     | PanDA job id: 7105350580
[2026-04-21 18:42:01] 2026-04-21 22:41:27,218 | INFO     | task id: 49514634
[2026-04-21 18:42:01] 2026-04-21 22:41:27,218 | INFO     | errors: (none)
[2026-04-21 18:42:01] 2026-04-21 22:41:27,218 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-21 18:42:01] 2026-04-21 22:41:27,218 | INFO     | pilot state: finished 
[2026-04-21 18:42:01] 2026-04-21 22:41:27,218 | INFO     | transexitcode: 0
[2026-04-21 18:42:01] 2026-04-21 22:41:27,218 | INFO     | exeerrorcode: 0
[2026-04-21 18:42:01] 2026-04-21 22:41:27,218 | INFO     | exeerrordiag: 
[2026-04-21 18:42:01] 2026-04-21 22:41:27,218 | INFO     | exitcode: 0
[2026-04-21 18:42:01] 2026-04-21 22:41:27,218 | INFO     | exitmsg: OK
[2026-04-21 18:42:01] 2026-04-21 22:41:27,218 | INFO     | cpuconsumptiontime: 42579 s
[2026-04-21 18:42:01] 2026-04-21 22:41:27,218 | INFO     | nevents: 400
[2026-04-21 18:42:01] 2026-04-21 22:41:27,218 | INFO     | neventsw: 0
[2026-04-21 18:42:01] 2026-04-21 22:41:27,219 | INFO     | pid: 419329
[2026-04-21 18:42:01] 2026-04-21 22:41:27,219 | INFO     | pgrp: 419329
[2026-04-21 18:42:01] 2026-04-21 22:41:27,219 | INFO     | corecount: 9
[2026-04-21 18:42:01] 2026-04-21 22:41:27,219 | INFO     | event service: False
[2026-04-21 18:42:01] 2026-04-21 22:41:27,219 | INFO     | sizes: {0: 2273865, 1: 2274550, 2: 2274578, 3: 2274951, 4: 2276407, 5: 2276435, 18006: 2309098, 18007: 2309097, 18010: 2318151, 18012: 2318207, 18013: 2318401}
[2026-04-21 18:42:01] 2026-04-21 22:41:27,219 | INFO     | --------------------------------------------------
[2026-04-21 18:42:01] 2026-04-21 22:41:27,219 | INFO     | 
[2026-04-21 18:42:01] 2026-04-21 22:41:27,219 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-04-21 18:42:01] 2026-04-21 22:41:27,319 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-21 18:42:01] 2026-04-21 22:41:27,319 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-21 18:42:01] 2026-04-21 22:41:27,319 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-21 18:42:01] 2026-04-21 22:41:27,319 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-21 18:42:01] 2026-04-21 22:41:27,320 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-21 18:42:01] 2026-04-21 22:41:27,320 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-21 18:42:01] 2026-04-21 22:41:27,320 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-21 18:42:01] 2026-04-21 22:41:27,320 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-21 18:42:01] 2026-04-21 22:41:27,320 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-21 18:42:01] 2026-04-21 22:41:27,320 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-21 18:42:01] 2026-04-21 22:41:27,320 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-21 18:42:01] 2026-04-21 22:41:27,320 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-21 18:42:01] 2026-04-21 22:41:27,320 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-21 18:42:01] 2026-04-21 22:41:27,320 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-21 18:42:01] 2026-04-21 22:41:27,320 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-21 18:42:01] 2026-04-21 22:41:27,320 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-21 18:42:01] 2026-04-21 22:41:27,320 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-21 18:42:01] 2026-04-21 22:41:27,321 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-21 18:42:01] 2026-04-21 22:41:27,321 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-21 18:42:01] 2026-04-21 22:41:27,321 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-21 18:42:01] 2026-04-21 22:41:27,321 | INFO     | job 7105350580 has completed (purged errors)
[2026-04-21 18:42:01] 2026-04-21 22:41:27,321 | INFO     | overall cleanup function is called
[2026-04-21 18:42:01] 2026-04-21 22:41:28,351 | INFO     | --- collectZombieJob: --- 10, [419329]
[2026-04-21 18:42:01] 2026-04-21 22:41:28,351 | INFO     | zombie collector waiting for pid 419329
[2026-04-21 18:42:01] 2026-04-21 22:41:28,351 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-21 18:42:01] 2026-04-21 22:41:28,351 | INFO     | collected zombie processes
[2026-04-21 18:42:01] 2026-04-21 22:41:28,351 | INFO     | will attempt to kill all subprocesses of pid=419329
[2026-04-21 18:42:01] 2026-04-21 22:41:28,709 | INFO     | process IDs to be killed: [419329] (in reverse order)
[2026-04-21 18:42:01] 2026-04-21 22:41:28,883 | WARNING  | found no corresponding commands to process id(s)
[2026-04-21 18:42:01] 2026-04-21 22:41:28,883 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-21 18:42:01] 2026-04-21 22:41:28,911 | INFO     | did not find any defunct processes belonging to 419329
[2026-04-21 18:42:01] 2026-04-21 22:41:28,993 | INFO     | did not find any defunct processes belonging to 419329
[2026-04-21 18:42:01] 2026-04-21 22:41:28,993 | INFO     | Ready for new job
[2026-04-21 18:42:01] 2026-04-21 22:41:29,000 | INFO     | **************************************
[2026-04-21 18:42:01] 2026-04-21 22:41:29,000 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-21 18:42:01] 2026-04-21 22:41:29,001 | INFO     | **************************************
[2026-04-21 18:42:01] 2026-04-21 22:41:29,001 | INFO     | 
[2026-04-21 18:42:01] 2026-04-21 22:41:29,026 | INFO     | architecture information:
[2026-04-21 18:42:01] 2026-04-21 22:41:29,054 | INFO     | executing command: cat /etc/os-release
[2026-04-21 18:42:01] 2026-04-21 22:41:29,108 | INFO     | cat /etc/os-release:
[2026-04-21 18:42:01] NAME="CentOS Linux"
[2026-04-21 18:42:01] VERSION="7 (Core)"
[2026-04-21 18:42:01] ID="centos"
[2026-04-21 18:42:01] ID_LIKE="rhel fedora"
[2026-04-21 18:42:01] VERSION_ID="7"
[2026-04-21 18:42:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-21 18:42:01] ANSI_COLOR="0;31"
[2026-04-21 18:42:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-21 18:42:01] HOME_URL="https://www.centos.org/"
[2026-04-21 18:42:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-21 18:42:01] 
[2026-04-21 18:42:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-21 18:42:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-21 18:42:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-21 18:42:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-21 18:42:01] 
[2026-04-21 18:42:01] 2026-04-21 22:41:29,108 | INFO     | **************************************
[2026-04-21 18:42:01] 2026-04-21 22:41:29,612 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-04-21 18:42:01] 2026-04-21 22:41:29,678 | INFO     | sufficient remaining disk space (115291979776 B)
[2026-04-21 18:42:01] 2026-04-21 22:41:29,679 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-21 18:42:01] 2026-04-21 22:41:29,679 | INFO     | current server update state: UPDATING_FINAL
[2026-04-21 18:42:01] 2026-04-21 22:41:29,679 | INFO     | update_server=False
[2026-04-21 18:42:01] 2026-04-21 22:41:29,679 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-21 18:42:01] 2026-04-21 22:41:30,038 | INFO     | all payload control threads have been joined
[2026-04-21 18:42:01] 2026-04-21 22:41:30,139 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-21 18:42:01] 2026-04-21 22:41:30,139 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-21 18:42:01] 2026-04-21 22:41:30,139 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-21 18:42:01] 2026-04-21 22:41:30,139 | INFO     | will abort loop
[2026-04-21 18:42:01] 2026-04-21 22:41:30,314 | INFO     | all data control threads have been joined
[2026-04-21 18:42:01] 2026-04-21 22:41:30,411 | INFO     | all job control threads have been joined
[2026-04-21 18:42:01] 2026-04-21 22:41:30,423 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-21 18:42:01] 2026-04-21 22:41:30,684 | INFO     | [job] retrieve thread has finished
[2026-04-21 18:42:01] 2026-04-21 22:41:30,726 | INFO     | [payload] execute_payloads thread has finished
[2026-04-21 18:42:01] 2026-04-21 22:41:30,779 | INFO     | [payload] failed_post thread has finished
[2026-04-21 18:42:01] 2026-04-21 22:41:30,935 | INFO     | [data] copytool_in thread has finished
[2026-04-21 18:42:01] 2026-04-21 22:41:31,044 | INFO     | [payload] control thread has finished
[2026-04-21 18:42:01] 2026-04-21 22:41:31,145 | INFO     | [job] job monitor thread has finished
[2026-04-21 18:42:01] 2026-04-21 22:41:31,320 | INFO     | [data] control thread has finished
[2026-04-21 18:42:01] 2026-04-21 22:41:31,417 | INFO     | [job] control thread has finished
[2026-04-21 18:42:01] 2026-04-21 22:41:31,422 | INFO     | [job] create_data_payload thread has finished
[2026-04-21 18:42:01] 2026-04-21 22:41:31,426 | INFO     | [payload] validate_pre thread has finished
[2026-04-21 18:42:01] 2026-04-21 22:41:32,101 | INFO     | [job] validate thread has finished
[2026-04-21 18:42:01] 2026-04-21 22:41:32,232 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-21 18:42:01] 2026-04-21 22:41:32,247 | INFO     | [payload] validate_post thread has finished
[2026-04-21 18:42:01] 2026-04-21 22:41:32,436 | INFO     | [data] copytool_out thread has finished
[2026-04-21 18:42:01] 2026-04-21 22:41:32,557 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-21 18:42:01] 2026-04-21 22:41:33,238 | INFO     | [job] queue monitor thread has finished
[2026-04-21 18:42:01] 2026-04-21 22:41:36,567 | INFO     | [data] queue_monitor thread has finished
[2026-04-21 18:42:01] 2026-04-21 22:41:39,106 | INFO     | [monitor] cgroup control has ended
[2026-04-21 18:42:01] 2026-04-21 22:41:39,846 | INFO     | job.realtimelogging is not enabled
[2026-04-21 18:42:01] 2026-04-21 22:41:40,852 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-21 18:42:01] 2026-04-21 22:41:41,775 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140244780934976)>', '<ExcThread(monitor, started 140244414351104)>']
[2026-04-21 18:42:01] 2026-04-21 22:41:46,801 | INFO     | all workflow threads have been joined
[2026-04-21 18:42:01] 2026-04-21 22:41:46,803 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-21 18:42:01] 2026-04-21 22:41:46,803 | INFO     | traces error code: 0
[2026-04-21 18:42:01] 2026-04-21 22:41:46,803 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-21 18:42:01] 2026-04-21 22:41:59,676 | INFO     | PID=406697 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-21 18:42:01] 2026-04-21 22:41:59,677 | INFO     | .. there are 17 such processes running
[2026-04-21 18:42:01] 2026-04-21 22:41:59,677 | INFO     | found 0 job(s) in 20 queues
[2026-04-21 18:42:01] 2026-04-21 22:41:59,677 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-21 18:42:01] 2026-04-21 22:41:59,677 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-21 18:42:01] 2026-04-21 22:41:59,677 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-21 18:42:01] 2026-04-21 22:41:59,677 | INFO     | [monitor] control thread has ended
[2026-04-21 18:42:01] 2026-04-21 22:42:00,206 [wrapper] ==== pilot stdout END ====
[2026-04-21 18:42:01] 2026-04-21 22:42:00,246 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-21 18:42:01] 2026-04-21 22:42:00,250 [wrapper] pilotpid: 406697
[2026-04-21 18:42:01] 2026-04-21 22:42:00,252 [wrapper] Pilot exit status: 0
[2026-04-21 18:42:01] 2026-04-21 22:42:00,368 [wrapper] pandaids: 7105350580
[2026-04-21 18:42:01] 2026-04-21 22:42:00,565 [wrapper] cleanup supervisor_pilot  940544 406698
[2026-04-21 18:42:01] 2026-04-21 22:42:00,568 [wrapper] Test setup, not cleaning
[2026-04-21 18:42:01] 2026-04-21 22:42:00,572 [wrapper] apfmon messages muted
[2026-04-21 18:42:01] 2026-04-21 22:42:00,582 [wrapper] ==== wrapper stdout END ====
[2026-04-21 18:42:01] 2026-04-21 22:42:00,592 [wrapper] ==== wrapper stderr END ====
[2026-04-21 18:42:01]  *** Error codes and diagnostics ***
[2026-04-21 18:42:01]     "exeErrorCode": 0,
[2026-04-21 18:42:01]     "pilotErrorCode": 0,
[2026-04-21 18:42:01]  *** Listing of results directory ***
[2026-04-21 18:42:01] total 337172
[2026-04-21 18:42:01] -rwx------. 1 boincer umatlas     36322 Apr 21 07:05 runpilot2-wrapper.sh
[2026-04-21 18:42:01] -rw-r--r--. 1 boincer umatlas      5094 Apr 21 08:12 queuedata.json
[2026-04-21 18:42:01] -rw-r--r--. 1 boincer umatlas    644190 Apr 21 08:13 pilot3.tar.gz
[2026-04-21 18:42:01] -rw-r--r--. 1 boincer umatlas       100 Apr 21 13:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-21 18:42:01] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 21 13:39 run_atlas
[2026-04-21 18:42:01] -rw-r--r--. 1 boincer umatlas       105 Apr 21 13:39 job.xml
[2026-04-21 18:42:01] -rw-r--r--. 2 boincer umatlas 188020851 Apr 21 13:39 EVNT.49514628._000035.pool.root.1
[2026-04-21 18:42:01] -rw-r--r--. 2 boincer umatlas    656910 Apr 21 13:39 input.tar.gz
[2026-04-21 18:42:01] -rw-r--r--. 2 boincer umatlas     15665 Apr 21 13:39 start_atlas.sh
[2026-04-21 18:42:01] drwxrwx--x. 2 boincer umatlas      4096 Apr 21 13:39 shared
[2026-04-21 18:42:01] -rw-r--r--. 1 boincer umatlas         0 Apr 21 13:39 boinc_lockfile
[2026-04-21 18:42:01] -rw-r--r--. 1 boincer umatlas      2479 Apr 21 13:40 pandaJob.out
[2026-04-21 18:42:01] -rw-------. 1 boincer umatlas        57 Apr 21 13:40 setup.sh.local
[2026-04-21 18:42:01] -rw-------. 1 boincer umatlas    994998 Apr 21 13:40 agis_schedconf.cvmfs.json
[2026-04-21 18:42:01] -rw-------. 1 boincer umatlas       444 Apr 21 13:41 workernode_map.json
[2026-04-21 18:42:01] drwx------. 5 boincer umatlas      4096 Apr 21 13:41 pilot3
[2026-04-21 18:42:01] -rw-------. 1 boincer umatlas 149232289 Apr 21 18:38 HITS.49514634._001863.pool.root.1
[2026-04-21 18:42:01] -rw-r--r--. 1 boincer umatlas       488 Apr 21 18:38 boinc_task_state.xml
[2026-04-21 18:42:01] -rw-r--r--. 1 boincer umatlas      6775 Apr 21 18:40 init_data.xml
[2026-04-21 18:42:01] -rw-------. 1 boincer umatlas      1056 Apr 21 18:41 memory_monitor_summary.json
[2026-04-21 18:42:01] -rw-------. 1 boincer umatlas        95 Apr 21 18:41 pilot_heartbeat.json
[2026-04-21 18:42:01] -rw-------. 1 boincer umatlas   1509089 Apr 21 18:41 agis_ddmendpoints.agis.ALL.json
[2026-04-21 18:42:01] -rw-------. 1 boincer umatlas    443053 Apr 21 18:41 log.49514634._001863.job.log.tgz.1
[2026-04-21 18:42:01] -rw-------. 1 boincer umatlas      6447 Apr 21 18:41 heartbeat_new.json
[2026-04-21 18:42:01] -rw-------. 1 boincer umatlas      6338 Apr 21 18:41 heartbeat.json
[2026-04-21 18:42:01] -rw-r--r--. 1 boincer umatlas        28 Apr 21 18:41 wrapper_checkpoint.txt
[2026-04-21 18:42:01] -rw-------. 1 boincer umatlas       822 Apr 21 18:41 pilotlog.txt
[2026-04-21 18:42:01] -rw-------. 1 boincer umatlas   1531970 Apr 21 18:42 log.49514634._001863.job.log.1
[2026-04-21 18:42:01] -rw-------. 1 boincer umatlas       357 Apr 21 18:42 output.list
[2026-04-21 18:42:01] -rw-r--r--. 1 boincer umatlas       410 Apr 21 18:42 runtime_log
[2026-04-21 18:42:01] -rw-------. 1 boincer umatlas   1996800 Apr 21 18:42 result.tar.gz
[2026-04-21 18:42:01] -rw-r--r--. 1 boincer umatlas      8974 Apr 21 18:42 runtime_log.err
[2026-04-21 18:42:01] -rw-------. 1 boincer umatlas       662 Apr 21 18:42 5a0d4054ea02.diag
[2026-04-21 18:42:01] -rw-r--r--. 1 boincer umatlas      8192 Apr 21 18:42 boinc_mmap_file
[2026-04-21 18:42:01] -rw-r--r--. 1 boincer umatlas     21040 Apr 21 18:42 stderr.txt
[2026-04-21 18:42:01] HITS file was successfully produced:
[2026-04-21 18:42:01] -rw-------. 1 boincer umatlas 149232289 Apr 21 18:38 shared/HITS.pool.root.1
[2026-04-21 18:42:01]  *** Contents of shared directory: ***
[2026-04-21 18:42:01] total 331972
[2026-04-21 18:42:01] -rw-r--r--. 2 boincer umatlas 188020851 Apr 21 13:39 ATLAS.root_0
[2026-04-21 18:42:01] -rw-r--r--. 2 boincer umatlas    656910 Apr 21 13:39 input.tar.gz
[2026-04-21 18:42:01] -rw-r--r--. 2 boincer umatlas     15665 Apr 21 13:39 start_atlas.sh
[2026-04-21 18:42:01] -rw-------. 1 boincer umatlas 149232289 Apr 21 18:38 HITS.pool.root.1
[2026-04-21 18:42:01] -rw-------. 1 boincer umatlas   1996800 Apr 21 18:42 result.tar.gz
18:42:02 (400432): run_atlas exited; CPU time 43307.410641
18:42:02 (400432): called boinc_finish(0)

</stderr_txt>
]]>

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