Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:02:12 (3922553): wrapper (7.7.26015): starting
15:02:12 (3922553): wrapper: running run_atlas (--nthreads 8)
[2026-04-21 15:02:12] Arguments: --nthreads 8
[2026-04-21 15:02:12] Threads: 8
[2026-04-21 15:02:12] Checking for CVMFS
[2026-04-21 15:02:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-21 15:02:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-21 15:02:13] Running cvmfs_config stat atlas.cern.ch
[2026-04-21 15:02:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-21 15:02:13] 2.13.3.0 7489 240683 346080 158700 1 502 31426828 32935937 13174 16776704 0 1100629589 99.562 1282369549 36627 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-21 15:02:13] CVMFS is ok
[2026-04-21 15:02:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 15:02:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 15:02:13] Further information can be found at the LHC@home message board.
[2026-04-21 15:02:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 15:02:13] Checking for apptainer binary...
[2026-04-21 15:02:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-21 15:02:13] Running /usr/bin/apptainer --version
[2026-04-21 15:02:13] apptainer version 1.4.5-2.el9
[2026-04-21 15:02:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 15:02:14] c7-13-32.aglt2.org
[2026-04-21 15:02:14] apptainer works
[2026-04-21 15:02:14] Set ATHENA_PROC_NUMBER=8
[2026-04-21 15:02:14] Set ATHENA_CORE_NUMBER=8
[2026-04-21 15:02:14] Starting ATLAS job with PandaID=7105364297
[2026-04-21 15:02:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-21 20:01:57]  *** The last 200 lines of the pilot log: ***
[2026-04-21 20:01:57] 2026-04-21 23:36:26,599 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-21 20:01:57] 2026-04-21 23:36:26,600 | INFO     | log transfer has been attempted: DONE
[2026-04-21 20:01:57] 2026-04-21 23:36:26,600 | INFO     | job 7105364297 has finished - writing final server update
[2026-04-21 20:01:57] 2026-04-21 23:36:26,600 | INFO     | total number of processed events: 400 (read)
[2026-04-21 20:01:57] 2026-04-21 23:36:26,618 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-7105364297/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 20:01:57] 2026-04-21 23:36:26,619 | INFO     | extracted standard info from prmon json
[2026-04-21 20:01:57] 2026-04-21 23:36:26,619 | INFO     | extracted standard memory fields from prmon json
[2026-04-21 20:01:57] 2026-04-21 23:36:26,620 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-21 20:01:57] 2026-04-21 23:36:26,620 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-21 20:01:57] 2026-04-21 23:36:26,624 | INFO     | fitting pss+swap vs Time
[2026-04-21 20:01:57] 2026-04-21 23:36:26,624 | INFO     | sum of square deviations: 6036029133.323459
[2026-04-21 20:01:57] 2026-04-21 23:36:26,626 | INFO     | sum of deviations: -98131529.985178
[2026-04-21 20:01:57] 2026-04-21 23:36:26,626 | INFO     | mean x (centered): 0.0
[2026-04-21 20:01:57] 2026-04-21 23:36:26,626 | INFO     | mean y: 2531397.4312267657
[2026-04-21 20:01:57] 2026-04-21 23:36:26,626 | INFO     | intersect: 2531397.4312267657
[2026-04-21 20:01:57] 2026-04-21 23:36:26,627 | INFO     | chi2: 3.808785600458635
[2026-04-21 20:01:57] 2026-04-21 23:36:26,627 | INFO     | sum of square deviations: 5705709862.59091
[2026-04-21 20:01:57] 2026-04-21 23:36:26,628 | INFO     | sum of deviations: 52031566776.04546
[2026-04-21 20:01:57] 2026-04-21 23:36:26,628 | INFO     | mean x (centered): 0.0
[2026-04-21 20:01:57] 2026-04-21 23:36:26,629 | INFO     | mean y: 2555284.234848485
[2026-04-21 20:01:57] 2026-04-21 23:36:26,629 | INFO     | intersect: 2555284.234848485
[2026-04-21 20:01:57] 2026-04-21 23:36:26,629 | INFO     | chi2: 1.6352095564204145
[2026-04-21 20:01:57] 2026-04-21 23:36:26,629 | INFO     | current chi2=1.6352095564204145 (change=57.067429675655404 %)
[2026-04-21 20:01:57] 2026-04-21 23:36:26,629 | INFO     | sum of square deviations: 5387669891.830108
[2026-04-21 20:01:57] 2026-04-21 23:36:26,631 | INFO     | sum of deviations: 50989804097.11193
[2026-04-21 20:01:57] 2026-04-21 23:36:26,631 | INFO     | mean x (centered): 0.0
[2026-04-21 20:01:57] 2026-04-21 23:36:26,631 | INFO     | mean y: 2554784.694980695
[2026-04-21 20:01:57] 2026-04-21 23:36:26,631 | INFO     | intersect: 2554784.694980695
[2026-04-21 20:01:57] 2026-04-21 23:36:26,632 | INFO     | chi2: 1.6356741915150816
[2026-04-21 20:01:57] 2026-04-21 23:36:26,632 | INFO     | current chi2=1.6356741915150816 (change=-0.028414406755560825 %)
[2026-04-21 20:01:57] 2026-04-21 23:36:26,632 | INFO     | right removable region: 258
[2026-04-21 20:01:57] 2026-04-21 23:36:26,632 | INFO     | sum of square deviations: 5705647642.59091
[2026-04-21 20:01:57] 2026-04-21 23:36:26,634 | INFO     | sum of deviations: -44440567401.59091
[2026-04-21 20:01:57] 2026-04-21 23:36:26,634 | INFO     | mean x (centered): 0.0
[2026-04-21 20:01:57] 2026-04-21 23:36:26,634 | INFO     | mean y: 2551695.6136363638
[2026-04-21 20:01:57] 2026-04-21 23:36:26,634 | INFO     | intersect: 2551695.6136363638
[2026-04-21 20:01:57] 2026-04-21 23:36:26,634 | INFO     | chi2: 2.2791816245236296
[2026-04-21 20:01:57] 2026-04-21 23:36:26,634 | INFO     | current chi2=2.2791816245236296 (change=40.15988654627392 %)
[2026-04-21 20:01:57] 2026-04-21 23:36:26,635 | INFO     | sum of square deviations: 5387561311.613915
[2026-04-21 20:01:57] 2026-04-21 23:36:26,636 | INFO     | sum of deviations: -41937039232.328186
[2026-04-21 20:01:57] 2026-04-21 23:36:26,636 | INFO     | mean x (centered): 0.0
[2026-04-21 20:01:57] 2026-04-21 23:36:26,636 | INFO     | mean y: 2550481.1814671815
[2026-04-21 20:01:57] 2026-04-21 23:36:26,636 | INFO     | intersect: 2550481.1814671815
[2026-04-21 20:01:57] 2026-04-21 23:36:26,637 | INFO     | chi2: 2.272800948803393
[2026-04-21 20:01:57] 2026-04-21 23:36:26,637 | INFO     | current chi2=2.272800948803393 (change=0.27995468424199527 %)
[2026-04-21 20:01:57] 2026-04-21 23:36:26,637 | INFO     | left removable region: 10
[2026-04-21 20:01:57] 2026-04-21 23:36:26,637 | INFO     | sum of square deviations: 4729949772.8669615
[2026-04-21 20:01:57] 2026-04-21 23:36:26,639 | INFO     | sum of deviations: 8770163887.334677
[2026-04-21 20:01:57] 2026-04-21 23:36:26,639 | INFO     | mean x (centered): 0.0
[2026-04-21 20:01:57] 2026-04-21 23:36:26,639 | INFO     | mean y: 2575552.5362903224
[2026-04-21 20:01:57] 2026-04-21 23:36:26,639 | INFO     | intersect: 2575552.5362903224
[2026-04-21 20:01:57] 2026-04-21 23:36:26,639 | INFO     | chi2: 0.053680532997429906
[2026-04-21 20:01:57] 2026-04-21 23:36:26,639 | INFO     | current memory leak: 1.85 B/s (using 248 data points, chi2=0.05)
[2026-04-21 20:01:57] 2026-04-21 23:36:26,640 | INFO     | could have reported an average CPU frequency of 3288 MHz (13 samples)
[2026-04-21 20:01:57] 2026-04-21 23:36:26,640 | INFO     | ..............................
[2026-04-21 20:01:57] 2026-04-21 23:36:26,640 | INFO     | . Timing measurements:
[2026-04-21 20:01:57] 2026-04-21 23:36:26,640 | INFO     | . get job = 0 s
[2026-04-21 20:01:57] 2026-04-21 23:36:26,640 | INFO     | . initial setup = 12 s
[2026-04-21 20:01:57] 2026-04-21 23:36:26,640 | INFO     | . payload setup = 19 s
[2026-04-21 20:01:57] 2026-04-21 23:36:26,640 | INFO     | . stage-in = 0 s
[2026-04-21 20:01:57] 2026-04-21 23:36:26,640 | INFO     | . payload execution = 16382 s
[2026-04-21 20:01:57] 2026-04-21 23:36:26,641 | INFO     | . stage-out = 3 s
[2026-04-21 20:01:57] 2026-04-21 23:36:26,641 | INFO     | . log creation = 0 s
[2026-04-21 20:01:57] 2026-04-21 23:36:26,641 | INFO     | ..............................
[2026-04-21 20:01:57] 2026-04-21 23:36:26,788 | INFO     | 
[2026-04-21 20:01:57] 2026-04-21 23:36:26,789 | INFO     | job summary report
[2026-04-21 20:01:57] 2026-04-21 23:36:26,789 | INFO     | --------------------------------------------------
[2026-04-21 20:01:57] 2026-04-21 23:36:26,789 | INFO     | PanDA job id: 7105364297
[2026-04-21 20:01:57] 2026-04-21 23:36:26,789 | INFO     | task id: 49820375
[2026-04-21 20:01:57] 2026-04-21 23:36:26,789 | INFO     | errors: (none)
[2026-04-21 20:01:57] 2026-04-21 23:36:26,789 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-21 20:01:57] 2026-04-21 23:36:26,789 | INFO     | pilot state: finished 
[2026-04-21 20:01:57] 2026-04-21 23:36:26,789 | INFO     | transexitcode: 0
[2026-04-21 20:01:57] 2026-04-21 23:36:26,789 | INFO     | exeerrorcode: 0
[2026-04-21 20:01:57] 2026-04-21 23:36:26,789 | INFO     | exeerrordiag: 
[2026-04-21 20:01:57] 2026-04-21 23:36:26,789 | INFO     | exitcode: 0
[2026-04-21 20:01:57] 2026-04-21 23:36:26,789 | INFO     | exitmsg: OK
[2026-04-21 20:01:57] 2026-04-21 23:36:26,789 | INFO     | cpuconsumptiontime: 60111 s
[2026-04-21 20:01:57] 2026-04-21 23:36:26,789 | INFO     | nevents: 400
[2026-04-21 20:01:57] 2026-04-21 23:36:26,789 | INFO     | neventsw: 0
[2026-04-21 20:01:57] 2026-04-21 23:36:26,790 | INFO     | pid: 3932428
[2026-04-21 20:01:57] 2026-04-21 23:36:26,790 | INFO     | pgrp: 3932428
[2026-04-21 20:01:57] 2026-04-21 23:36:26,790 | INFO     | corecount: 8
[2026-04-21 20:01:57] 2026-04-21 23:36:26,790 | INFO     | event service: False
[2026-04-21 20:01:57] 2026-04-21 23:36:26,790 | INFO     | sizes: {0: 2274840, 1: 2276442, 16406: 2308407, 16411: 2317405, 16412: 2317461, 16414: 2317655}
[2026-04-21 20:01:57] 2026-04-21 23:36:26,790 | INFO     | --------------------------------------------------
[2026-04-21 20:01:57] 2026-04-21 23:36:26,790 | INFO     | 
[2026-04-21 20:01:57] 2026-04-21 23:36:26,790 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-04-21 20:01:57] 2026-04-21 23:36:26,888 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-21 20:01:57] 2026-04-21 23:36:26,889 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-21 20:01:57] 2026-04-21 23:36:26,889 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-21 20:01:57] 2026-04-21 23:36:26,889 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-21 20:01:57] 2026-04-21 23:36:26,889 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-21 20:01:57] 2026-04-21 23:36:26,889 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-21 20:01:57] 2026-04-21 23:36:26,889 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-21 20:01:57] 2026-04-21 23:36:26,889 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-21 20:01:57] 2026-04-21 23:36:26,889 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-21 20:01:57] 2026-04-21 23:36:26,889 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-21 20:01:57] 2026-04-21 23:36:26,890 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-21 20:01:57] 2026-04-21 23:36:26,890 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-21 20:01:57] 2026-04-21 23:36:26,890 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-21 20:01:57] 2026-04-21 23:36:26,890 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-21 20:01:57] 2026-04-21 23:36:26,890 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-21 20:01:57] 2026-04-21 23:36:26,890 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-21 20:01:57] 2026-04-21 23:36:26,890 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-21 20:01:57] 2026-04-21 23:36:26,890 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-21 20:01:57] 2026-04-21 23:36:26,890 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-21 20:01:57] 2026-04-21 23:36:26,890 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-21 20:01:57] 2026-04-21 23:36:26,890 | INFO     | job 7105364297 has completed (purged errors)
[2026-04-21 20:01:57] 2026-04-21 23:36:26,890 | INFO     | overall cleanup function is called
[2026-04-21 20:01:57] 2026-04-21 23:36:27,315 | INFO     | PID=3926464 has CPU usage=11.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-21 20:01:57] 2026-04-21 23:36:27,315 | INFO     | .. there are 12 such processes running
[2026-04-21 20:01:57] 2026-04-21 23:36:27,900 | INFO     | --- collectZombieJob: --- 10, [3932428]
[2026-04-21 20:01:57] 2026-04-21 23:36:27,900 | INFO     | zombie collector waiting for pid 3932428
[2026-04-21 20:01:57] 2026-04-21 23:36:27,900 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-21 20:01:57] 2026-04-21 23:36:27,900 | INFO     | collected zombie processes
[2026-04-21 20:01:57] 2026-04-21 23:36:27,901 | INFO     | will attempt to kill all subprocesses of pid=3932428
[2026-04-21 20:01:57] 2026-04-21 23:36:28,373 | INFO     | process IDs to be killed: [3932428] (in reverse order)
[2026-04-21 20:01:57] 2026-04-21 23:36:28,659 | WARNING  | found no corresponding commands to process id(s)
[2026-04-21 20:01:57] 2026-04-21 23:36:28,659 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-21 20:01:57] 2026-04-21 23:36:28,676 | INFO     | did not find any defunct processes belonging to 3932428
[2026-04-21 20:01:57] 2026-04-21 23:36:28,692 | INFO     | did not find any defunct processes belonging to 3932428
[2026-04-21 20:01:57] 2026-04-21 23:36:28,692 | INFO     | Ready for new job
[2026-04-21 20:01:57] 2026-04-21 23:36:28,696 | INFO     | **************************************
[2026-04-21 20:01:57] 2026-04-21 23:36:28,696 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-21 20:01:57] 2026-04-21 23:36:28,696 | INFO     | **************************************
[2026-04-21 20:01:57] 2026-04-21 23:36:28,696 | INFO     | 
[2026-04-21 20:01:57] 2026-04-21 23:36:28,724 | INFO     | architecture information:
[2026-04-21 20:01:57] 2026-04-21 23:36:28,762 | INFO     | executing command: cat /etc/os-release
[2026-04-21 20:01:57] 2026-04-21 23:36:29,009 | INFO     | cat /etc/os-release:
[2026-04-21 20:01:57] NAME="CentOS Linux"
[2026-04-21 20:01:57] VERSION="7 (Core)"
[2026-04-21 20:01:57] ID="centos"
[2026-04-21 20:01:57] ID_LIKE="rhel fedora"
[2026-04-21 20:01:57] VERSION_ID="7"
[2026-04-21 20:01:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-21 20:01:57] ANSI_COLOR="0;31"
[2026-04-21 20:01:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-21 20:01:57] HOME_URL="https://www.centos.org/"
[2026-04-21 20:01:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-21 20:01:57] 
[2026-04-21 20:01:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-21 20:01:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-21 20:01:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-21 20:01:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-21 20:01:57] 
[2026-04-21 20:01:57] 2026-04-21 23:36:29,010 | INFO     | **************************************
[2026-04-21 20:01:57] 2026-04-21 23:36:29,513 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-04-21 20:01:57] 2026-04-21 23:36:29,600 | INFO     | sufficient remaining disk space (78436630528 B)
[2026-04-21 20:01:57] 2026-04-21 23:36:29,600 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-21 20:01:57] 2026-04-21 23:36:29,600 | INFO     | current server update state: UPDATING_FINAL
[2026-04-21 20:01:57] 2026-04-21 23:36:29,600 | INFO     | update_server=False
[2026-04-21 20:01:57] 2026-04-21 23:36:29,600 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-21 20:01:57] 2026-04-21 23:36:29,656 | INFO     | all data control threads have been joined
[2026-04-21 20:01:57] 2026-04-21 23:36:30,004 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-21 20:01:57] 2026-04-21 23:36:30,390 | INFO     | all payload control threads have been joined
[2026-04-21 20:01:57] 2026-04-21 23:36:30,566 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-21 20:01:57] 2026-04-21 23:36:30,566 | INFO     | aborting loop
[2026-04-21 20:01:57] 2026-04-21 23:36:30,606 | INFO     | [job] retrieve thread has finished
[2026-04-21 20:01:57] 2026-04-21 23:36:30,615 | INFO     | [payload] execute_payloads thread has finished
[2026-04-21 20:01:57] 2026-04-21 23:36:30,618 | INFO     | [job] validate thread has finished
[2026-04-21 20:01:57] 2026-04-21 23:36:30,664 | INFO     | [data] control thread has finished
[2026-04-21 20:01:57] 2026-04-21 23:36:31,043 | INFO     | [job] create_data_payload thread has finished
[2026-04-21 20:01:57] 2026-04-21 23:36:31,046 | INFO     | [payload] validate_pre thread has finished
[2026-04-21 20:01:57] 2026-04-21 23:36:31,155 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-21 20:01:57] 2026-04-21 23:36:31,197 | INFO     | all job control threads have been joined
[2026-04-21 20:01:57] 2026-04-21 23:36:31,396 | INFO     | [payload] control thread has finished
[2026-04-21 20:01:57] 2026-04-21 23:36:31,460 | INFO     | [payload] failed_post thread has finished
[2026-04-21 20:01:57] 2026-04-21 23:36:31,572 | INFO     | [job] job monitor thread has finished
[2026-04-21 20:01:57] 2026-04-21 23:36:31,621 | INFO     | [data] copytool_in thread has finished
[2026-04-21 20:01:57] 2026-04-21 23:36:31,657 | INFO     | [payload] validate_post thread has finished
[2026-04-21 20:01:57] 2026-04-21 23:36:31,810 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-21 20:01:57] 2026-04-21 23:36:32,011 | INFO     | [data] copytool_out thread has finished
[2026-04-21 20:01:57] 2026-04-21 23:36:32,053 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-21 20:01:57] 2026-04-21 23:36:32,203 | INFO     | [job] control thread has finished
[2026-04-21 20:01:57] 2026-04-21 23:36:32,827 | INFO     | [job] queue monitor thread has finished
[2026-04-21 20:01:57] 2026-04-21 23:36:35,164 | INFO     | [data] queue_monitor thread has finished
[2026-04-21 20:01:57] 2026-04-21 23:36:59,786 | INFO     | PID=3926464 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-21 20:01:57] 2026-04-21 23:36:59,788 | INFO     | .. there are 12 such processes running
[2026-04-21 20:01:57] 2026-04-21 23:36:59,789 | INFO     | found 0 job(s) in 20 queues
[2026-04-21 20:01:57] 2026-04-21 23:36:59,789 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-21 20:01:57] 2026-04-21 23:36:59,789 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-21 20:01:57] 2026-04-21 23:37:19,972 | INFO     | [monitor] cgroup control has ended
[2026-04-21 20:01:57] 2026-04-21 23:37:21,760 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140713444857664)>', '<ExcThread(monitor, started 140712590964480)>']
[2026-04-21 20:01:57] 2026-04-21 23:37:21,943 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-21 20:01:57] 2026-04-21 23:37:21,943 | INFO     | [monitor] control thread has ended
[2026-04-21 20:01:57] 2026-04-21 23:37:26,786 | INFO     | all workflow threads have been joined
[2026-04-21 20:01:57] 2026-04-21 23:37:26,786 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-21 20:01:57] 2026-04-21 23:37:26,787 | INFO     | traces error code: 0
[2026-04-21 20:01:57] 2026-04-21 23:37:26,787 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-21 20:01:57] 2026-04-21 23:37:26,989 [wrapper] ==== pilot stdout END ====
[2026-04-21 20:01:57] 2026-04-21 23:37:26,991 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-21 20:01:57] 2026-04-21 23:37:26,996 [wrapper] pilotpid: 3926464
[2026-04-21 20:01:57] 2026-04-21 23:37:26,999 [wrapper] Pilot exit status: 0
[2026-04-21 20:01:57] 2026-04-21 23:37:27,024 [wrapper] pandaids: 7105364297
[2026-04-21 20:01:57] 2026-04-21 23:37:27,132 [wrapper] cleanup supervisor_pilot  347202 3926465
[2026-04-21 20:01:57] 2026-04-21 23:37:27,142 [wrapper] Test setup, not cleaning
[2026-04-21 20:01:57] 2026-04-21 23:37:27,151 [wrapper] apfmon messages muted
[2026-04-21 20:01:57] 2026-04-21 23:37:27,206 [wrapper] ==== wrapper stdout END ====
[2026-04-21 20:01:57] 2026-04-21 23:37:27,210 [wrapper] ==== wrapper stderr END ====
[2026-04-21 20:01:57]  *** Error codes and diagnostics ***
[2026-04-21 20:01:57]     "exeErrorCode": 0,
[2026-04-21 20:01:57]     "pilotErrorCode": 0,
[2026-04-21 20:01:57]  *** Listing of results directory ***
[2026-04-21 20:01:57] total 2454356
[2026-04-21 20:01:57] -rwx------. 1 boincer umatlas      36322 Apr 21 07:05 runpilot2-wrapper.sh
[2026-04-21 20:01:57] -rw-r--r--. 1 boincer umatlas     644190 Apr 21 08:04 pilot3.tar.gz
[2026-04-21 20:01:57] -rw-r--r--. 1 boincer umatlas       5094 Apr 21 08:12 queuedata.json
[2026-04-21 20:01:57] -rw-r--r--. 1 boincer umatlas        100 Apr 21 15:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-21 20:01:57] -rwxr-xr-x. 1 boincer umatlas       7986 Apr 21 15:02 run_atlas
[2026-04-21 20:01:57] -rw-r--r--. 1 boincer umatlas        105 Apr 21 15:02 job.xml
[2026-04-21 20:01:57] -rw-r--r--. 2 boincer umatlas 2228939427 Apr 21 15:02 EVNT.49820373._000040.pool.root.1
[2026-04-21 20:01:57] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 15:02 start_atlas.sh
[2026-04-21 20:01:57] drwxrwx--x. 2 boincer umatlas       4096 Apr 21 15:02 shared
[2026-04-21 20:01:57] -rw-r--r--. 2 boincer umatlas     656931 Apr 21 15:02 input.tar.gz
[2026-04-21 20:01:57] -rw-r--r--. 1 boincer umatlas          0 Apr 21 15:02 boinc_lockfile
[2026-04-21 20:01:57] -rw-r--r--. 1 boincer umatlas       2586 Apr 21 15:02 pandaJob.out
[2026-04-21 20:01:57] -rw-------. 1 boincer umatlas         57 Apr 21 15:02 setup.sh.local
[2026-04-21 20:01:57] -rw-------. 1 boincer umatlas     995017 Apr 21 15:02 agis_schedconf.cvmfs.json
[2026-04-21 20:01:57] -rw-------. 1 boincer umatlas        425 Apr 21 15:02 workernode_map.json
[2026-04-21 20:01:57] drwx------. 5 boincer umatlas       4096 Apr 21 15:02 pilot3
[2026-04-21 20:01:57] -rw-------. 1 boincer umatlas  276427333 Apr 21 19:33 HITS.49820375._011052.pool.root.1
[2026-04-21 20:01:57] -rw-r--r--. 1 boincer umatlas        488 Apr 21 19:33 boinc_task_state.xml
[2026-04-21 20:01:57] -rw-------. 1 boincer umatlas       1056 Apr 21 19:36 memory_monitor_summary.json
[2026-04-21 20:01:57] -rw-------. 1 boincer umatlas    1509089 Apr 21 19:36 agis_ddmendpoints.agis.ALL.json
[2026-04-21 20:01:57] -rw-------. 1 boincer umatlas     477724 Apr 21 19:36 log.49820375._011052.job.log.tgz.1
[2026-04-21 20:01:57] -rw-------. 1 boincer umatlas       6357 Apr 21 19:36 heartbeat_new.json
[2026-04-21 20:01:57] -rw-------. 1 boincer umatlas       6248 Apr 21 19:36 heartbeat.json
[2026-04-21 20:01:57] -rw-------. 1 boincer umatlas         95 Apr 21 19:36 pilot_heartbeat.json
[2026-04-21 20:01:57] -rw-------. 1 boincer umatlas       4819 Apr 21 19:37 pilotlog.txt
[2026-04-21 20:01:57] -rw-------. 1 boincer umatlas    1438088 Apr 21 19:37 log.49820375._011052.job.log.1
[2026-04-21 20:01:57] -rw-------. 1 boincer umatlas        357 Apr 21 19:37 output.list
[2026-04-21 20:01:57] -rw-r--r--. 1 boincer umatlas        410 Apr 21 19:37 runtime_log
[2026-04-21 20:01:57] -rw-------. 1 boincer umatlas    1935360 Apr 21 19:37 result.tar.gz
[2026-04-21 20:01:57] -rw-r--r--. 1 boincer umatlas       8964 Apr 21 19:37 runtime_log.err
[2026-04-21 20:01:57] -rw-------. 1 boincer umatlas        659 Apr 21 19:37 5a036fb04cfb.diag
[2026-04-21 20:01:57] -rw-r--r--. 1 boincer umatlas       6818 Apr 21 19:56 init_data.xml
[2026-04-21 20:01:57] -rw-r--r--. 1 boincer umatlas       8192 Apr 21 20:01 boinc_mmap_file
[2026-04-21 20:01:57] -rw-r--r--. 1 boincer umatlas         27 Apr 21 20:01 wrapper_checkpoint.txt
[2026-04-21 20:01:57] -rw-r--r--. 1 boincer umatlas      21120 Apr 21 20:01 stderr.txt
[2026-04-21 20:01:57] HITS file was successfully produced:
[2026-04-21 20:01:57] -rw-------. 1 boincer umatlas 276427333 Apr 21 19:33 shared/HITS.pool.root.1
[2026-04-21 20:01:57]  *** Contents of shared directory: ***
[2026-04-21 20:01:57] total 2449212
[2026-04-21 20:01:57] -rw-r--r--. 2 boincer umatlas 2228939427 Apr 21 15:02 ATLAS.root_0
[2026-04-21 20:01:57] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 15:02 start_atlas.sh
[2026-04-21 20:01:57] -rw-r--r--. 2 boincer umatlas     656931 Apr 21 15:02 input.tar.gz
[2026-04-21 20:01:57] -rw-------. 1 boincer umatlas  276427333 Apr 21 19:33 HITS.pool.root.1
[2026-04-21 20:01:57] -rw-------. 1 boincer umatlas    1935360 Apr 21 19:37 result.tar.gz
20:01:59 (3922553): run_atlas exited; CPU time 60516.327332
20:01:59 (3922553): called boinc_finish(0)

</stderr_txt>
]]>

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