Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:36:34 (3456609): wrapper (7.7.26015): starting
13:36:34 (3456609): wrapper: running run_atlas (--nthreads 9)
[2026-04-21 13:36:34] Arguments: --nthreads 9
[2026-04-21 13:36:34] Threads: 9
[2026-04-21 13:36:34] Checking for CVMFS
[2026-04-21 13:36:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-21 13:36:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-21 13:36:34] Running cvmfs_config stat atlas.cern.ch
[2026-04-21 13:36:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-21 13:36:34] 2.13.3.0 11360 240463 417108 158698 0 704 30314111 32935936 21656 16776704 0 955639597 99.611 1127920353 34982 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-21 13:36:34] CVMFS is ok
[2026-04-21 13:36:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 13:36:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 13:36:34] Further information can be found at the LHC@home message board.
[2026-04-21 13:36:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 13:36:34] Checking for apptainer binary...
[2026-04-21 13:36:34] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-21 13:36:34] Running /usr/bin/apptainer --version
[2026-04-21 13:36:34] apptainer version 1.4.5-2.el9
[2026-04-21 13:36:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 13:36:35] c6-8-25-3.aglt2.org
[2026-04-21 13:36:35] apptainer works
[2026-04-21 13:36:35] Set ATHENA_PROC_NUMBER=9
[2026-04-21 13:36:35] Set ATHENA_CORE_NUMBER=9
[2026-04-21 13:36:35] Starting ATLAS job with PandaID=7105635395
[2026-04-21 13:36:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-21 21:20:06]  *** The last 200 lines of the pilot log: ***
[2026-04-21 21:20:06] 2026-04-22 01:18:57,923 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-21 21:20:06] 2026-04-22 01:18:57,924 | INFO     | log transfer has been attempted: DONE
[2026-04-21 21:20:06] 2026-04-22 01:18:57,924 | INFO     | job 7105635395 has finished - writing final server update
[2026-04-21 21:20:06] 2026-04-22 01:18:57,924 | INFO     | total number of processed events: 400 (read)
[2026-04-21 21:20:06] 2026-04-22 01:18:58,123 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-7105635395/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 21:20:06] 2026-04-22 01:18:58,124 | INFO     | extracted standard info from prmon json
[2026-04-21 21:20:06] 2026-04-22 01:18:58,124 | INFO     | extracted standard memory fields from prmon json
[2026-04-21 21:20:06] 2026-04-22 01:18:58,128 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-21 21:20:06] 2026-04-22 01:18:58,128 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-21 21:20:06] 2026-04-22 01:18:58,159 | INFO     | fitting pss+swap vs Time
[2026-04-21 21:20:06] 2026-04-22 01:18:58,160 | INFO     | sum of square deviations: 29017039791.11227
[2026-04-21 21:20:06] 2026-04-22 01:18:58,175 | INFO     | sum of deviations: -3424468043.585926
[2026-04-21 21:20:06] 2026-04-22 01:18:58,175 | INFO     | mean x (centered): 0.0
[2026-04-21 21:20:06] 2026-04-22 01:18:58,175 | INFO     | mean y: 2605410.7400881057
[2026-04-21 21:20:06] 2026-04-22 01:18:58,176 | INFO     | intersect: 2605410.7400881057
[2026-04-21 21:20:06] 2026-04-22 01:18:58,192 | INFO     | chi2: 3.210140490760252
[2026-04-21 21:20:06] 2026-04-22 01:18:58,193 | INFO     | sum of square deviations: 28068898520.102364
[2026-04-21 21:20:06] 2026-04-22 01:18:58,204 | INFO     | sum of deviations: 58824168762.835175
[2026-04-21 21:20:06] 2026-04-22 01:18:58,204 | INFO     | mean x (centered): 0.0
[2026-04-21 21:20:06] 2026-04-22 01:18:58,204 | INFO     | mean y: 2615354.4320712695
[2026-04-21 21:20:06] 2026-04-22 01:18:58,204 | INFO     | intersect: 2615354.4320712695
[2026-04-21 21:20:06] 2026-04-22 01:18:58,211 | INFO     | chi2: 1.6774801843719123
[2026-04-21 21:20:06] 2026-04-22 01:18:58,211 | INFO     | current chi2=1.6774801843719123 (change=47.7443373833574 %)
[2026-04-21 21:20:06] 2026-04-22 01:18:58,212 | INFO     | sum of square deviations: 27141559071.484123
[2026-04-21 21:20:06] 2026-04-22 01:18:58,232 | INFO     | sum of deviations: 57522198894.91664
[2026-04-21 21:20:06] 2026-04-22 01:18:58,232 | INFO     | mean x (centered): 0.0
[2026-04-21 21:20:06] 2026-04-22 01:18:58,233 | INFO     | mean y: 2615140.4166666665
[2026-04-21 21:20:06] 2026-04-22 01:18:58,233 | INFO     | intersect: 2615140.4166666665
[2026-04-21 21:20:06] 2026-04-22 01:18:58,233 | INFO     | chi2: 1.6776805545901483
[2026-04-21 21:20:06] 2026-04-22 01:18:58,234 | INFO     | current chi2=1.6776805545901483 (change=-0.01194471446534964 %)
[2026-04-21 21:20:06] 2026-04-22 01:18:58,234 | INFO     | right removable region: 443
[2026-04-21 21:20:06] 2026-04-22 01:18:58,234 | INFO     | sum of square deviations: 28068774201.492092
[2026-04-21 21:20:06] 2026-04-22 01:18:58,313 | INFO     | sum of deviations: -81852478751.2205
[2026-04-21 21:20:06] 2026-04-22 01:18:58,317 | INFO     | mean x (centered): 0.0
[2026-04-21 21:20:06] 2026-04-22 01:18:58,317 | INFO     | mean y: 2617967.521158129
[2026-04-21 21:20:06] 2026-04-22 01:18:58,317 | INFO     | intersect: 2617967.521158129
[2026-04-21 21:20:06] 2026-04-22 01:18:58,318 | INFO     | chi2: 1.7006499795562262
[2026-04-21 21:20:06] 2026-04-22 01:18:58,319 | INFO     | current chi2=1.7006499795562262 (change=47.022568499690045 %)
[2026-04-21 21:20:06] 2026-04-22 01:18:58,319 | INFO     | sum of square deviations: 27141419991.64636
[2026-04-21 21:20:06] 2026-04-22 01:18:58,335 | INFO     | sum of deviations: -75443216809.6171
[2026-04-21 21:20:06] 2026-04-22 01:18:58,336 | INFO     | mean x (centered): 0.0
[2026-04-21 21:20:06] 2026-04-22 01:18:58,346 | INFO     | mean y: 2616902.572072072
[2026-04-21 21:20:06] 2026-04-22 01:18:58,346 | INFO     | intersect: 2616902.572072072
[2026-04-21 21:20:06] 2026-04-22 01:18:58,347 | INFO     | chi2: 1.6785595692023598
[2026-04-21 21:20:06] 2026-04-22 01:18:58,351 | INFO     | current chi2=1.6785595692023598 (change=1.2989392655407397 %)
[2026-04-21 21:20:06] 2026-04-22 01:18:58,351 | INFO     | left removable region: 10
[2026-04-21 21:20:06] 2026-04-22 01:18:58,352 | INFO     | sum of square deviations: 25173725663.41337
[2026-04-21 21:20:06] 2026-04-22 01:18:58,385 | INFO     | sum of deviations: -14297836375.351067
[2026-04-21 21:20:06] 2026-04-22 01:18:58,385 | INFO     | mean x (centered): 0.0
[2026-04-21 21:20:06] 2026-04-22 01:18:58,385 | INFO     | mean y: 2627114.2678983836
[2026-04-21 21:20:06] 2026-04-22 01:18:58,385 | INFO     | intersect: 2627114.2678983836
[2026-04-21 21:20:06] 2026-04-22 01:18:58,386 | INFO     | chi2: 0.12509932701999263
[2026-04-21 21:20:06] 2026-04-22 01:18:58,387 | INFO     | current memory leak: -0.57 B/s (using 433 data points, chi2=0.13)
[2026-04-21 21:20:06] 2026-04-22 01:18:58,388 | INFO     | could have reported an average CPU frequency of 2605 MHz (19 samples)
[2026-04-21 21:20:06] 2026-04-22 01:18:58,403 | INFO     | ..............................
[2026-04-21 21:20:06] 2026-04-22 01:18:58,403 | INFO     | . Timing measurements:
[2026-04-21 21:20:06] 2026-04-22 01:18:58,403 | INFO     | . get job = 0 s
[2026-04-21 21:20:06] 2026-04-22 01:18:58,403 | INFO     | . initial setup = 12 s
[2026-04-21 21:20:06] 2026-04-22 01:18:58,403 | INFO     | . payload setup = 24 s
[2026-04-21 21:20:06] 2026-04-22 01:18:58,403 | INFO     | . stage-in = 0 s
[2026-04-21 21:20:06] 2026-04-22 01:18:58,404 | INFO     | . payload execution = 27672 s
[2026-04-21 21:20:06] 2026-04-22 01:18:58,404 | INFO     | . stage-out = 6 s
[2026-04-21 21:20:06] 2026-04-22 01:18:58,404 | INFO     | . log creation = 1 s
[2026-04-21 21:20:06] 2026-04-22 01:18:58,404 | INFO     | ..............................
[2026-04-21 21:20:06] 2026-04-22 01:18:58,913 | INFO     | 
[2026-04-21 21:20:06] 2026-04-22 01:18:58,913 | INFO     | job summary report
[2026-04-21 21:20:06] 2026-04-22 01:18:58,914 | INFO     | --------------------------------------------------
[2026-04-21 21:20:06] 2026-04-22 01:18:58,914 | INFO     | PanDA job id: 7105635395
[2026-04-21 21:20:06] 2026-04-22 01:18:58,914 | INFO     | task id: 49820375
[2026-04-21 21:20:06] 2026-04-22 01:18:58,914 | INFO     | errors: (none)
[2026-04-21 21:20:06] 2026-04-22 01:18:58,914 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-21 21:20:06] 2026-04-22 01:18:58,914 | INFO     | pilot state: finished 
[2026-04-21 21:20:06] 2026-04-22 01:18:58,914 | INFO     | transexitcode: 0
[2026-04-21 21:20:06] 2026-04-22 01:18:58,914 | INFO     | exeerrorcode: 0
[2026-04-21 21:20:06] 2026-04-22 01:18:58,914 | INFO     | exeerrordiag: 
[2026-04-21 21:20:06] 2026-04-22 01:18:58,914 | INFO     | exitcode: 0
[2026-04-21 21:20:06] 2026-04-22 01:18:58,915 | INFO     | exitmsg: OK
[2026-04-21 21:20:06] 2026-04-22 01:18:58,915 | INFO     | cpuconsumptiontime: 86725 s
[2026-04-21 21:20:06] 2026-04-22 01:18:58,915 | INFO     | nevents: 400
[2026-04-21 21:20:06] 2026-04-22 01:18:58,915 | INFO     | neventsw: 0
[2026-04-21 21:20:06] 2026-04-22 01:18:58,915 | INFO     | pid: 3465594
[2026-04-21 21:20:06] 2026-04-22 01:18:58,915 | INFO     | pgrp: 3465594
[2026-04-21 21:20:06] 2026-04-22 01:18:58,915 | INFO     | corecount: 9
[2026-04-21 21:20:06] 2026-04-22 01:18:58,915 | INFO     | event service: False
[2026-04-21 21:20:06] 2026-04-22 01:18:58,915 | INFO     | sizes: {0: 2273956, 1: 2276442, 2: 2276442, 27701: 2312977, 27708: 2321975, 27709: 2322031, 27710: 2322353}
[2026-04-21 21:20:06] 2026-04-22 01:18:58,916 | INFO     | --------------------------------------------------
[2026-04-21 21:20:06] 2026-04-22 01:18:58,916 | INFO     | 
[2026-04-21 21:20:06] 2026-04-22 01:18:58,916 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-04-21 21:20:06] 2026-04-22 01:18:58,995 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-21 21:20:06] 2026-04-22 01:18:58,996 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-21 21:20:06] 2026-04-22 01:18:58,996 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-21 21:20:06] 2026-04-22 01:18:58,996 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-21 21:20:06] 2026-04-22 01:18:58,996 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-21 21:20:06] 2026-04-22 01:18:58,996 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-21 21:20:06] 2026-04-22 01:18:58,996 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-21 21:20:06] 2026-04-22 01:18:58,996 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-21 21:20:06] 2026-04-22 01:18:58,996 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-21 21:20:06] 2026-04-22 01:18:58,997 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-21 21:20:06] 2026-04-22 01:18:58,997 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-21 21:20:06] 2026-04-22 01:18:58,997 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-21 21:20:06] 2026-04-22 01:18:58,997 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-21 21:20:06] 2026-04-22 01:18:58,997 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-21 21:20:06] 2026-04-22 01:18:58,997 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-21 21:20:06] 2026-04-22 01:18:58,997 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-21 21:20:06] 2026-04-22 01:18:58,997 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-21 21:20:06] 2026-04-22 01:18:58,997 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-21 21:20:06] 2026-04-22 01:18:58,997 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-21 21:20:06] 2026-04-22 01:18:58,997 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-21 21:20:06] 2026-04-22 01:18:58,997 | INFO     | job 7105635395 has completed (purged errors)
[2026-04-21 21:20:06] 2026-04-22 01:18:58,998 | INFO     | overall cleanup function is called
[2026-04-21 21:20:06] 2026-04-22 01:19:00,067 | INFO     | --- collectZombieJob: --- 10, [3465594]
[2026-04-21 21:20:06] 2026-04-22 01:19:00,067 | INFO     | zombie collector waiting for pid 3465594
[2026-04-21 21:20:06] 2026-04-22 01:19:00,067 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-21 21:20:06] 2026-04-22 01:19:00,067 | INFO     | collected zombie processes
[2026-04-21 21:20:06] 2026-04-22 01:19:00,067 | INFO     | will attempt to kill all subprocesses of pid=3465594
[2026-04-21 21:20:06] 2026-04-22 01:19:00,200 | INFO     | PID=3460465 has CPU usage=12.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-21 21:20:06] 2026-04-22 01:19:00,201 | INFO     | .. there are 21 such processes running
[2026-04-21 21:20:06] 2026-04-22 01:19:01,943 | INFO     | process IDs to be killed: [3465594] (in reverse order)
[2026-04-21 21:20:06] 2026-04-22 01:19:02,297 | WARNING  | found no corresponding commands to process id(s)
[2026-04-21 21:20:06] 2026-04-22 01:19:02,297 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-21 21:20:06] 2026-04-22 01:19:02,342 | INFO     | did not find any defunct processes belonging to 3465594
[2026-04-21 21:20:06] 2026-04-22 01:19:02,361 | INFO     | did not find any defunct processes belonging to 3465594
[2026-04-21 21:20:06] 2026-04-22 01:19:02,361 | INFO     | Ready for new job
[2026-04-21 21:20:06] 2026-04-22 01:19:02,368 | INFO     | **************************************
[2026-04-21 21:20:06] 2026-04-22 01:19:02,368 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-21 21:20:06] 2026-04-22 01:19:02,369 | INFO     | **************************************
[2026-04-21 21:20:06] 2026-04-22 01:19:02,369 | INFO     | 
[2026-04-21 21:20:06] 2026-04-22 01:19:02,375 | INFO     | architecture information:
[2026-04-21 21:20:06] 2026-04-22 01:19:02,375 | INFO     | executing command: cat /etc/os-release
[2026-04-21 21:20:06] 2026-04-22 01:19:02,432 | INFO     | cat /etc/os-release:
[2026-04-21 21:20:06] NAME="CentOS Linux"
[2026-04-21 21:20:06] VERSION="7 (Core)"
[2026-04-21 21:20:06] ID="centos"
[2026-04-21 21:20:06] ID_LIKE="rhel fedora"
[2026-04-21 21:20:06] VERSION_ID="7"
[2026-04-21 21:20:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-21 21:20:06] ANSI_COLOR="0;31"
[2026-04-21 21:20:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-21 21:20:06] HOME_URL="https://www.centos.org/"
[2026-04-21 21:20:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-21 21:20:06] 
[2026-04-21 21:20:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-21 21:20:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-21 21:20:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-21 21:20:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-21 21:20:06] 
[2026-04-21 21:20:06] 2026-04-22 01:19:02,432 | INFO     | **************************************
[2026-04-21 21:20:06] 2026-04-22 01:19:02,936 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-04-21 21:20:06] 2026-04-22 01:19:03,004 | INFO     | sufficient remaining disk space (62878908416 B)
[2026-04-21 21:20:06] 2026-04-22 01:19:03,005 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-21 21:20:06] 2026-04-22 01:19:03,005 | INFO     | current server update state: UPDATING_FINAL
[2026-04-21 21:20:06] 2026-04-22 01:19:03,005 | INFO     | update_server=False
[2026-04-21 21:20:06] 2026-04-22 01:19:03,005 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-21 21:20:06] 2026-04-22 01:19:03,006 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-21 21:20:06] 2026-04-22 01:19:03,006 | INFO     | aborting loop
[2026-04-21 21:20:06] 2026-04-22 01:19:03,006 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-21 21:20:06] 2026-04-22 01:19:03,118 | INFO     | all data control threads have been joined
[2026-04-21 21:20:06] 2026-04-22 01:19:03,475 | INFO     | all job control threads have been joined
[2026-04-21 21:20:06] 2026-04-22 01:19:03,969 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-21 21:20:06] 2026-04-22 01:19:03,999 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-21 21:20:06] 2026-04-22 01:19:04,012 | INFO     | [job] retrieve thread has finished
[2026-04-21 21:20:06] 2026-04-22 01:19:04,033 | INFO     | [job] job monitor thread has finished
[2026-04-21 21:20:06] 2026-04-22 01:19:04,066 | INFO     | [job] create_data_payload thread has finished
[2026-04-21 21:20:06] 2026-04-22 01:19:04,075 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-21 21:20:06] 2026-04-22 01:19:04,124 | INFO     | [data] control thread has finished
[2026-04-21 21:20:06] 2026-04-22 01:19:04,130 | INFO     | [payload] validate_pre thread has finished
[2026-04-21 21:20:06] 2026-04-22 01:19:04,196 | INFO     | all payload control threads have been joined
[2026-04-21 21:20:06] 2026-04-22 01:19:04,482 | INFO     | [job] control thread has finished
[2026-04-21 21:20:06] 2026-04-22 01:19:04,497 | INFO     | [payload] execute_payloads thread has finished
[2026-04-21 21:20:06] 2026-04-22 01:19:04,521 | INFO     | [data] copytool_in thread has finished
[2026-04-21 21:20:06] 2026-04-22 01:19:04,687 | INFO     | [payload] validate_post thread has finished
[2026-04-21 21:20:06] 2026-04-22 01:19:05,020 | INFO     | [job] queue monitor thread has finished
[2026-04-21 21:20:06] 2026-04-22 01:19:05,026 | INFO     | [job] validate thread has finished
[2026-04-21 21:20:06] 2026-04-22 01:19:05,036 | INFO     | [data] copytool_out thread has finished
[2026-04-21 21:20:06] 2026-04-22 01:19:05,202 | INFO     | [payload] control thread has finished
[2026-04-21 21:20:06] 2026-04-22 01:19:05,231 | INFO     | [payload] failed_post thread has finished
[2026-04-21 21:20:06] 2026-04-22 01:19:07,978 | INFO     | [data] queue_monitor thread has finished
[2026-04-21 21:20:06] 2026-04-22 01:19:33,575 | INFO     | PID=3460465 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-21 21:20:06] 2026-04-22 01:19:33,578 | INFO     | .. there are 22 such processes running
[2026-04-21 21:20:06] 2026-04-22 01:19:33,580 | INFO     | found 0 job(s) in 20 queues
[2026-04-21 21:20:06] 2026-04-22 01:19:33,584 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-21 21:20:06] 2026-04-22 01:19:33,584 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-21 21:20:06] 2026-04-22 01:19:56,567 | INFO     | [monitor] cgroup control has ended
[2026-04-21 21:20:06] 2026-04-22 01:19:58,584 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139926674466624)>', '<ExcThread(monitor, started 139926175725312)>']
[2026-04-21 21:20:06] 2026-04-22 01:19:58,743 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-21 21:20:06] 2026-04-22 01:19:58,743 | INFO     | [monitor] control thread has ended
[2026-04-21 21:20:06] 2026-04-22 01:20:03,611 | INFO     | all workflow threads have been joined
[2026-04-21 21:20:06] 2026-04-22 01:20:03,611 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-21 21:20:06] 2026-04-22 01:20:03,612 | INFO     | traces error code: 0
[2026-04-21 21:20:06] 2026-04-22 01:20:03,612 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-21 21:20:06] 2026-04-22 01:20:04,765 [wrapper] ==== pilot stdout END ====
[2026-04-21 21:20:06] 2026-04-22 01:20:04,785 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-21 21:20:06] 2026-04-22 01:20:04,793 [wrapper] pilotpid: 3460465
[2026-04-21 21:20:06] 2026-04-22 01:20:04,797 [wrapper] Pilot exit status: 0
[2026-04-21 21:20:06] 2026-04-22 01:20:04,834 [wrapper] pandaids: 7105635395
[2026-04-21 21:20:06] 2026-04-22 01:20:05,591 [wrapper] cleanup supervisor_pilot  464605 3460466
[2026-04-21 21:20:06] 2026-04-22 01:20:05,623 [wrapper] Test setup, not cleaning
[2026-04-21 21:20:06] 2026-04-22 01:20:05,636 [wrapper] apfmon messages muted
[2026-04-21 21:20:06] 2026-04-22 01:20:05,651 [wrapper] ==== wrapper stdout END ====
[2026-04-21 21:20:06] 2026-04-22 01:20:05,676 [wrapper] ==== wrapper stderr END ====
[2026-04-21 21:20:06]  *** Error codes and diagnostics ***
[2026-04-21 21:20:06]     "exeErrorCode": 0,
[2026-04-21 21:20:06]     "pilotErrorCode": 0,
[2026-04-21 21:20:06]  *** Listing of results directory ***
[2026-04-21 21:20:06] total 2474536
[2026-04-21 21:20:06] -rwx------. 1 boincer umatlas      36322 Apr 21 07:23 runpilot2-wrapper.sh
[2026-04-21 21:20:06] -rw-r--r--. 1 boincer umatlas     644190 Apr 21 12:01 pilot3.tar.gz
[2026-04-21 21:20:06] -rw-r--r--. 1 boincer umatlas       5094 Apr 21 13:00 queuedata.json
[2026-04-21 21:20:06] -rw-r--r--. 1 boincer umatlas        100 Apr 21 13:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-21 21:20:06] -rwxr-xr-x. 1 boincer umatlas       7986 Apr 21 13:36 run_atlas
[2026-04-21 21:20:06] -rw-r--r--. 1 boincer umatlas        105 Apr 21 13:36 job.xml
[2026-04-21 21:20:06] -rw-r--r--. 2 boincer umatlas 2247878637 Apr 21 13:36 EVNT.49820373._000049.pool.root.1
[2026-04-21 21:20:06] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 13:36 start_atlas.sh
[2026-04-21 21:20:06] drwxrwx--x. 2 boincer umatlas       4096 Apr 21 13:36 shared
[2026-04-21 21:20:06] -rw-r--r--. 2 boincer umatlas     656941 Apr 21 13:36 input.tar.gz
[2026-04-21 21:20:06] -rw-r--r--. 1 boincer umatlas          0 Apr 21 13:36 boinc_lockfile
[2026-04-21 21:20:06] -rw-r--r--. 1 boincer umatlas       2586 Apr 21 13:36 pandaJob.out
[2026-04-21 21:20:06] -rw-------. 1 boincer umatlas         57 Apr 21 13:36 setup.sh.local
[2026-04-21 21:20:06] -rw-------. 1 boincer umatlas     994998 Apr 21 13:36 agis_schedconf.cvmfs.json
[2026-04-21 21:20:06] -rw-------. 1 boincer umatlas        442 Apr 21 13:37 workernode_map.json
[2026-04-21 21:20:06] drwx------. 5 boincer umatlas       4096 Apr 21 13:37 pilot3
[2026-04-21 21:20:06] -rw-r--r--. 1 boincer umatlas       6792 Apr 21 21:11 init_data.xml
[2026-04-21 21:20:06] -rw-------. 1 boincer umatlas  276594681 Apr 21 21:16 HITS.49820375._011758.pool.root.1
[2026-04-21 21:20:06] -rw-r--r--. 1 boincer umatlas        489 Apr 21 21:16 boinc_task_state.xml
[2026-04-21 21:20:06] -rw-------. 1 boincer umatlas       1069 Apr 21 21:18 memory_monitor_summary.json
[2026-04-21 21:20:06] -rw-------. 1 boincer umatlas    1509089 Apr 21 21:18 agis_ddmendpoints.agis.ALL.json
[2026-04-21 21:20:06] -rw-------. 1 boincer umatlas     568744 Apr 21 21:18 log.49820375._011758.job.log.tgz.1
[2026-04-21 21:20:06] -rw-------. 1 boincer umatlas       6440 Apr 21 21:18 heartbeat_new.json
[2026-04-21 21:20:06] -rw-------. 1 boincer umatlas       6331 Apr 21 21:18 heartbeat.json
[2026-04-21 21:20:06] -rw-------. 1 boincer umatlas         95 Apr 21 21:19 pilot_heartbeat.json
[2026-04-21 21:20:06] -rw-r--r--. 1 boincer umatlas       8192 Apr 21 21:19 boinc_mmap_file
[2026-04-21 21:20:06] -rw-r--r--. 1 boincer umatlas         28 Apr 21 21:19 wrapper_checkpoint.txt
[2026-04-21 21:20:06] -rw-------. 1 boincer umatlas       4819 Apr 21 21:20 pilotlog.txt
[2026-04-21 21:20:06] -rw-------. 1 boincer umatlas    2131657 Apr 21 21:20 log.49820375._011758.job.log.1
[2026-04-21 21:20:06] -rw-------. 1 boincer umatlas        357 Apr 21 21:20 output.list
[2026-04-21 21:20:06] -rw-r--r--. 1 boincer umatlas        410 Apr 21 21:20 runtime_log
[2026-04-21 21:20:06] -rw-------. 1 boincer umatlas    2713600 Apr 21 21:20 result.tar.gz
[2026-04-21 21:20:06] -rw-r--r--. 1 boincer umatlas       8969 Apr 21 21:20 runtime_log.err
[2026-04-21 21:20:06] -rw-------. 1 boincer umatlas        664 Apr 21 21:20 5e479ae61892.diag
[2026-04-21 21:20:06] -rw-r--r--. 1 boincer umatlas      21138 Apr 21 21:20 stderr.txt
[2026-04-21 21:20:06] HITS file was successfully produced:
[2026-04-21 21:20:06] -rw-------. 1 boincer umatlas 276594681 Apr 21 21:16 shared/HITS.pool.root.1
[2026-04-21 21:20:06]  *** Contents of shared directory: ***
[2026-04-21 21:20:06] total 2468628
[2026-04-21 21:20:06] -rw-r--r--. 2 boincer umatlas 2247878637 Apr 21 13:36 ATLAS.root_0
[2026-04-21 21:20:06] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 13:36 start_atlas.sh
[2026-04-21 21:20:06] -rw-r--r--. 2 boincer umatlas     656941 Apr 21 13:36 input.tar.gz
[2026-04-21 21:20:06] -rw-------. 1 boincer umatlas  276594681 Apr 21 21:16 HITS.pool.root.1
[2026-04-21 21:20:06] -rw-------. 1 boincer umatlas    2713600 Apr 21 21:20 result.tar.gz
21:20:08 (3456609): run_atlas exited; CPU time 88106.531176
21:20:08 (3456609): called boinc_finish(0)

</stderr_txt>
]]>

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