Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:03:39 (3214094): wrapper (7.7.26015): starting
17:03:39 (3214094): wrapper: running run_atlas (--nthreads 4)
[2026-04-22 17:03:39] Arguments: --nthreads 4
[2026-04-22 17:03:39] Threads: 4
[2026-04-22 17:03:39] Checking for CVMFS
[2026-04-22 17:03:39] No cvmfs_config command found, will try listing directly
[2026-04-22 17:03:39] CVMFS is ok
[2026-04-22 17:03:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-22 17:03:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-22 17:03:39] Further information can be found at the LHC@home message board.
[2026-04-22 17:03:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-22 17:03:39] Checking for apptainer binary...
[2026-04-22 17:03:39] which: no apptainer in ((null))
[2026-04-22 17:03:39] apptainer is not installed, using version from CVMFS
[2026-04-22 17:03:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-22 17:03:39] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot48/slots/4/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2026-04-22 17:03:39] apptainer works
[2026-04-22 17:03:39] Set ATHENA_PROC_NUMBER=4
[2026-04-22 17:03:39] Set ATHENA_CORE_NUMBER=4
[2026-04-22 17:03:39] Starting ATLAS job with PandaID=7105339493
[2026-04-22 17:03:39] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot48/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-22 19:51:16]  *** The last 200 lines of the pilot log: ***
[2026-04-22 19:51:16] 2026-04-22 17:50:39,814 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-22 19:51:16] 2026-04-22 17:50:39,814 | INFO     | log transfer has been attempted: DONE
[2026-04-22 19:51:16] 2026-04-22 17:50:39,814 | INFO     | job 7105339493 has finished - writing final server update
[2026-04-22 19:51:16] 2026-04-22 17:50:39,815 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2799451/.job.ad'
[2026-04-22 19:51:16] 2026-04-22 17:50:39,815 | INFO     | total number of processed events: 400 (read)
[2026-04-22 19:51:16] 2026-04-22 17:50:39,836 | INFO     | using path: /var/lib/boinc/var/slot48/slots/4/PanDA_Pilot-7105339493/memory_monitor_summary.json (trf name=prmon)
[2026-04-22 19:51:16] 2026-04-22 17:50:39,836 | INFO     | extracted standard info from prmon json
[2026-04-22 19:51:16] 2026-04-22 17:50:39,836 | INFO     | extracted standard memory fields from prmon json
[2026-04-22 19:51:16] 2026-04-22 17:50:39,836 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-22 19:51:16] 2026-04-22 17:50:39,837 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-22 19:51:16] 2026-04-22 17:50:39,839 | INFO     | fitting pss+swap vs Time
[2026-04-22 19:51:16] 2026-04-22 17:50:39,840 | INFO     | sum of square deviations: 1367709365.0
[2026-04-22 19:51:16] 2026-04-22 17:50:39,840 | INFO     | sum of deviations: 4688066733.000002
[2026-04-22 19:51:16] 2026-04-22 17:50:39,840 | INFO     | mean x (centered): 0.0
[2026-04-22 19:51:16] 2026-04-22 17:50:39,841 | INFO     | mean y: 2345553.3048780486
[2026-04-22 19:51:16] 2026-04-22 17:50:39,841 | INFO     | intersect: 2345553.3048780486
[2026-04-22 19:51:16] 2026-04-22 17:50:39,841 | INFO     | chi2: 1.9705963737212708
[2026-04-22 19:51:16] 2026-04-22 17:50:39,841 | INFO     | sum of square deviations: 1246386160.0
[2026-04-22 19:51:16] 2026-04-22 17:50:39,842 | INFO     | sum of deviations: 15165103005.999998
[2026-04-22 19:51:16] 2026-04-22 17:50:39,842 | INFO     | mean x (centered): 0.0
[2026-04-22 19:51:16] 2026-04-22 17:50:39,842 | INFO     | mean y: 2358385.4465408805
[2026-04-22 19:51:16] 2026-04-22 17:50:39,842 | INFO     | intersect: 2358385.4465408805
[2026-04-22 19:51:16] 2026-04-22 17:50:39,842 | INFO     | chi2: 1.102717765067294
[2026-04-22 19:51:16] 2026-04-22 17:50:39,843 | INFO     | current chi2=1.102717765067294 (change=44.0414191473963 %)
[2026-04-22 19:51:16] 2026-04-22 17:50:39,843 | INFO     | sum of square deviations: 1132458442.5
[2026-04-22 19:51:16] 2026-04-22 17:50:39,844 | INFO     | sum of deviations: 14581004765.000002
[2026-04-22 19:51:16] 2026-04-22 17:50:39,844 | INFO     | mean x (centered): 0.0
[2026-04-22 19:51:16] 2026-04-22 17:50:39,844 | INFO     | mean y: 2357603.324675325
[2026-04-22 19:51:16] 2026-04-22 17:50:39,844 | INFO     | intersect: 2357603.324675325
[2026-04-22 19:51:16] 2026-04-22 17:50:39,844 | INFO     | chi2: 1.1036181478241287
[2026-04-22 19:51:16] 2026-04-22 17:50:39,844 | INFO     | current chi2=1.1036181478241287 (change=-0.08165124253528717 %)
[2026-04-22 19:51:16] 2026-04-22 17:50:39,844 | INFO     | right removable region: 153
[2026-04-22 19:51:16] 2026-04-22 17:50:39,845 | INFO     | sum of square deviations: 1246386160.0
[2026-04-22 19:51:16] 2026-04-22 17:50:39,845 | INFO     | sum of deviations: -11094881849.0
[2026-04-22 19:51:16] 2026-04-22 17:50:39,845 | INFO     | mean x (centered): 0.0
[2026-04-22 19:51:16] 2026-04-22 17:50:39,845 | INFO     | mean y: 2364992.754716981
[2026-04-22 19:51:16] 2026-04-22 17:50:39,846 | INFO     | intersect: 2364992.754716981
[2026-04-22 19:51:16] 2026-04-22 17:50:39,846 | INFO     | chi2: 0.8996831737257217
[2026-04-22 19:51:16] 2026-04-22 17:50:39,846 | INFO     | current chi2=0.8996831737257217 (change=54.344624514518834 %)
[2026-04-22 19:51:16] 2026-04-22 17:50:39,846 | INFO     | sum of square deviations: 1132458442.5
[2026-04-22 19:51:16] 2026-04-22 17:50:39,847 | INFO     | sum of deviations: -8788027464.0
[2026-04-22 19:51:16] 2026-04-22 17:50:39,847 | INFO     | mean x (centered): 0.0
[2026-04-22 19:51:16] 2026-04-22 17:50:39,847 | INFO     | mean y: 2361898.064935065
[2026-04-22 19:51:16] 2026-04-22 17:50:39,847 | INFO     | intersect: 2361898.064935065
[2026-04-22 19:51:16] 2026-04-22 17:50:39,847 | INFO     | chi2: 0.8941703957718663
[2026-04-22 19:51:16] 2026-04-22 17:50:39,847 | INFO     | current chi2=0.8941703957718663 (change=0.612746588449151 %)
[2026-04-22 19:51:16] 2026-04-22 17:50:39,848 | INFO     | left removable region: 10
[2026-04-22 19:51:16] 2026-04-22 17:50:39,848 | INFO     | sum of square deviations: 906703512.0
[2026-04-22 19:51:16] 2026-04-22 17:50:39,848 | INFO     | sum of deviations: 1277475785.9999995
[2026-04-22 19:51:16] 2026-04-22 17:50:39,849 | INFO     | mean x (centered): 0.0
[2026-04-22 19:51:16] 2026-04-22 17:50:39,849 | INFO     | mean y: 2375873.5174825173
[2026-04-22 19:51:16] 2026-04-22 17:50:39,849 | INFO     | intersect: 2375873.5174825173
[2026-04-22 19:51:16] 2026-04-22 17:50:39,849 | INFO     | chi2: 0.002438622771854214
[2026-04-22 19:51:16] 2026-04-22 17:50:39,849 | INFO     | current memory leak: 1.41 B/s (using 143 data points, chi2=0.00)
[2026-04-22 19:51:16] 2026-04-22 17:50:39,849 | INFO     | could have reported an average CPU frequency of 2802 MHz (9 samples)
[2026-04-22 19:51:16] 2026-04-22 17:50:39,850 | INFO     | ..............................
[2026-04-22 19:51:16] 2026-04-22 17:50:39,850 | INFO     | . Timing measurements:
[2026-04-22 19:51:16] 2026-04-22 17:50:39,850 | INFO     | . get job = 0 s
[2026-04-22 19:51:16] 2026-04-22 17:50:39,850 | INFO     | . initial setup = 5 s
[2026-04-22 19:51:16] 2026-04-22 17:50:39,850 | INFO     | . payload setup = 10 s
[2026-04-22 19:51:16] 2026-04-22 17:50:39,850 | INFO     | . stage-in = 0 s
[2026-04-22 19:51:16] 2026-04-22 17:50:39,850 | INFO     | . payload execution = 9975 s
[2026-04-22 19:51:16] 2026-04-22 17:50:39,850 | INFO     | . stage-out = 0 s
[2026-04-22 19:51:16] 2026-04-22 17:50:39,850 | INFO     | . log creation = 0 s
[2026-04-22 19:51:16] 2026-04-22 17:50:39,850 | INFO     | ..............................
[2026-04-22 19:51:16] 2026-04-22 17:50:40,289 | INFO     | 
[2026-04-22 19:51:16] 2026-04-22 17:50:40,289 | INFO     | job summary report
[2026-04-22 19:51:16] 2026-04-22 17:50:40,289 | INFO     | --------------------------------------------------
[2026-04-22 19:51:16] 2026-04-22 17:50:40,289 | INFO     | PanDA job id: 7105339493
[2026-04-22 19:51:16] 2026-04-22 17:50:40,289 | INFO     | task id: 49820244
[2026-04-22 19:51:16] 2026-04-22 17:50:40,289 | INFO     | errors: (none)
[2026-04-22 19:51:16] 2026-04-22 17:50:40,289 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-22 19:51:16] 2026-04-22 17:50:40,289 | INFO     | pilot state: finished 
[2026-04-22 19:51:16] 2026-04-22 17:50:40,290 | INFO     | transexitcode: 0
[2026-04-22 19:51:16] 2026-04-22 17:50:40,290 | INFO     | exeerrorcode: 0
[2026-04-22 19:51:16] 2026-04-22 17:50:40,290 | INFO     | exeerrordiag: 
[2026-04-22 19:51:16] 2026-04-22 17:50:40,290 | INFO     | exitcode: 0
[2026-04-22 19:51:16] 2026-04-22 17:50:40,290 | INFO     | exitmsg: OK
[2026-04-22 19:51:16] 2026-04-22 17:50:40,290 | INFO     | cpuconsumptiontime: 38652 s
[2026-04-22 19:51:16] 2026-04-22 17:50:40,290 | INFO     | nevents: 400
[2026-04-22 19:51:16] 2026-04-22 17:50:40,290 | INFO     | neventsw: 0
[2026-04-22 19:51:16] 2026-04-22 17:50:40,290 | INFO     | pid: 3223825
[2026-04-22 19:51:16] 2026-04-22 17:50:40,290 | INFO     | pgrp: 3223825
[2026-04-22 19:51:16] 2026-04-22 17:50:40,290 | INFO     | corecount: 4
[2026-04-22 19:51:16] 2026-04-22 17:50:40,290 | INFO     | event service: False
[2026-04-22 19:51:16] 2026-04-22 17:50:40,290 | INFO     | sizes: {0: 2274760, 1: 2276390, 11: 2276418, 9989: 2304944, 9990: 2314019, 9993: 2314405}
[2026-04-22 19:51:16] 2026-04-22 17:50:40,290 | INFO     | --------------------------------------------------
[2026-04-22 19:51:16] 2026-04-22 17:50:40,290 | INFO     | 
[2026-04-22 19:51:16] 2026-04-22 17:50:40,291 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot48/slots/4
[2026-04-22 19:51:16] 2026-04-22 17:50:40,317 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-22 19:51:16] 2026-04-22 17:50:40,318 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-22 19:51:16] 2026-04-22 17:50:40,318 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-22 19:51:16] 2026-04-22 17:50:40,318 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-22 19:51:16] 2026-04-22 17:50:40,318 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-22 19:51:16] 2026-04-22 17:50:40,318 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-22 19:51:16] 2026-04-22 17:50:40,318 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-22 19:51:16] 2026-04-22 17:50:40,318 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-22 19:51:16] 2026-04-22 17:50:40,319 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-22 19:51:16] 2026-04-22 17:50:40,319 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-22 19:51:16] 2026-04-22 17:50:40,319 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-22 19:51:16] 2026-04-22 17:50:40,319 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-22 19:51:16] 2026-04-22 17:50:40,319 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-22 19:51:16] 2026-04-22 17:50:40,319 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-22 19:51:16] 2026-04-22 17:50:40,319 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-22 19:51:16] 2026-04-22 17:50:40,319 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-22 19:51:16] 2026-04-22 17:50:40,319 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-22 19:51:16] 2026-04-22 17:50:40,319 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-22 19:51:16] 2026-04-22 17:50:40,319 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-22 19:51:16] 2026-04-22 17:50:40,320 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-22 19:51:16] 2026-04-22 17:50:40,320 | INFO     | job 7105339493 has completed (purged errors)
[2026-04-22 19:51:16] 2026-04-22 17:50:40,320 | INFO     | overall cleanup function is called
[2026-04-22 19:51:16] 2026-04-22 17:50:41,330 | INFO     | --- collectZombieJob: --- 10, [3223825]
[2026-04-22 19:51:16] 2026-04-22 17:50:41,331 | INFO     | zombie collector waiting for pid 3223825
[2026-04-22 19:51:16] 2026-04-22 17:50:41,331 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-22 19:51:16] 2026-04-22 17:50:41,331 | INFO     | collected zombie processes
[2026-04-22 19:51:16] 2026-04-22 17:50:41,331 | INFO     | will attempt to kill all subprocesses of pid=3223825
[2026-04-22 19:51:16] 2026-04-22 17:50:41,700 | INFO     | process IDs to be killed: [3223825] (in reverse order)
[2026-04-22 19:51:16] 2026-04-22 17:50:41,845 | WARNING  | found no corresponding commands to process id(s)
[2026-04-22 19:51:16] 2026-04-22 17:50:41,846 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-22 19:51:16] 2026-04-22 17:50:41,868 | INFO     | did not find any defunct processes belonging to 3223825
[2026-04-22 19:51:16] 2026-04-22 17:50:41,880 | INFO     | did not find any defunct processes belonging to 3223825
[2026-04-22 19:51:16] 2026-04-22 17:50:41,880 | INFO     | Ready for new job
[2026-04-22 19:51:16] 2026-04-22 17:50:41,881 | INFO     | **************************************
[2026-04-22 19:51:16] 2026-04-22 17:50:41,881 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-22 19:51:16] 2026-04-22 17:50:41,881 | INFO     | **************************************
[2026-04-22 19:51:16] 2026-04-22 17:50:41,881 | INFO     | 
[2026-04-22 19:51:16] 2026-04-22 17:50:41,887 | INFO     | architecture information:
[2026-04-22 19:51:16] 2026-04-22 17:50:41,887 | INFO     | executing command: cat /etc/os-release
[2026-04-22 19:51:16] 2026-04-22 17:50:41,901 | INFO     | cat /etc/os-release:
[2026-04-22 19:51:16] NAME="CentOS Linux"
[2026-04-22 19:51:16] VERSION="7 (Core)"
[2026-04-22 19:51:16] ID="centos"
[2026-04-22 19:51:16] ID_LIKE="rhel fedora"
[2026-04-22 19:51:16] VERSION_ID="7"
[2026-04-22 19:51:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-22 19:51:16] ANSI_COLOR="0;31"
[2026-04-22 19:51:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-22 19:51:16] HOME_URL="https://www.centos.org/"
[2026-04-22 19:51:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-22 19:51:16] 
[2026-04-22 19:51:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-22 19:51:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-22 19:51:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-22 19:51:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-22 19:51:16] 
[2026-04-22 19:51:16] 2026-04-22 17:50:41,902 | INFO     | **************************************
[2026-04-22 19:51:16] 2026-04-22 17:50:42,404 | INFO     | executing command: df -mP /var/lib/boinc/var/slot48/slots/4
[2026-04-22 19:51:16] 2026-04-22 17:50:42,425 | INFO     | sufficient remaining disk space (229192499200 B)
[2026-04-22 19:51:16] 2026-04-22 17:50:42,426 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-22 19:51:16] 2026-04-22 17:50:42,426 | INFO     | current server update state: UPDATING_FINAL
[2026-04-22 19:51:16] 2026-04-22 17:50:42,426 | INFO     | update_server=False
[2026-04-22 19:51:16] 2026-04-22 17:50:42,426 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-22 19:51:16] 2026-04-22 17:50:42,717 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-22 19:51:16] 2026-04-22 17:50:43,242 | INFO     | all payload control threads have been joined
[2026-04-22 19:51:16] 2026-04-22 17:50:43,256 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-22 19:51:16] 2026-04-22 17:50:43,256 | INFO     | aborting loop
[2026-04-22 19:51:16] 2026-04-22 17:50:43,431 | INFO     | [job] retrieve thread has finished
[2026-04-22 19:51:16] 2026-04-22 17:50:43,439 | INFO     | [job] create_data_payload thread has finished
[2026-04-22 19:51:16] 2026-04-22 17:50:43,445 | INFO     | all job control threads have been joined
[2026-04-22 19:51:16] 2026-04-22 17:50:43,500 | INFO     | all data control threads have been joined
[2026-04-22 19:51:16] 2026-04-22 17:50:43,523 | INFO     | [payload] failed_post thread has finished
[2026-04-22 19:51:16] 2026-04-22 17:50:43,919 | INFO     | [payload] validate_post thread has finished
[2026-04-22 19:51:16] 2026-04-22 17:50:43,922 | INFO     | [data] copytool_in thread has finished
[2026-04-22 19:51:16] 2026-04-22 17:50:44,248 | INFO     | [payload] control thread has finished
[2026-04-22 19:51:16] 2026-04-22 17:50:44,262 | INFO     | [job] job monitor thread has finished
[2026-04-22 19:51:16] 2026-04-22 17:50:44,451 | INFO     | [job] control thread has finished
[2026-04-22 19:51:16] 2026-04-22 17:50:44,506 | INFO     | [data] control thread has finished
[2026-04-22 19:51:16] 2026-04-22 17:50:44,637 | INFO     | [job] validate thread has finished
[2026-04-22 19:51:16] 2026-04-22 17:50:44,723 | INFO     | [data] copytool_out thread has finished
[2026-04-22 19:51:16] 2026-04-22 17:50:44,755 | INFO     | [payload] execute_payloads thread has finished
[2026-04-22 19:51:16] 2026-04-22 17:50:44,822 | INFO     | [payload] validate_pre thread has finished
[2026-04-22 19:51:16] 2026-04-22 17:50:44,943 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-22 19:51:16] 2026-04-22 17:50:45,658 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-22 19:51:16] 2026-04-22 17:50:45,945 | INFO     | [job] queue monitor thread has finished
[2026-04-22 19:51:16] 2026-04-22 17:50:49,665 | INFO     | [data] queue_monitor thread has finished
[2026-04-22 19:51:16] 2026-04-22 17:50:53,233 | INFO     | job.realtimelogging is not enabled
[2026-04-22 19:51:16] 2026-04-22 17:50:54,239 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-22 19:51:16] 2026-04-22 17:51:09,143 | INFO     | [monitor] cgroup control has ended
[2026-04-22 19:51:16] 2026-04-22 17:51:11,045 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22491541452608)>', '<ExcThread(monitor, started 22491287500544)>']
[2026-04-22 19:51:16] 2026-04-22 17:51:12,590 | INFO     | PID=3218604 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-22 19:51:16] 2026-04-22 17:51:12,590 | INFO     | .. there are 7 such processes running
[2026-04-22 19:51:16] 2026-04-22 17:51:12,591 | INFO     | found 0 job(s) in 20 queues
[2026-04-22 19:51:16] 2026-04-22 17:51:12,591 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-22 19:51:16] 2026-04-22 17:51:12,591 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-22 19:51:16] 2026-04-22 17:51:12,591 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-22 19:51:16] 2026-04-22 17:51:12,591 | INFO     | [monitor] control thread has ended
[2026-04-22 19:51:16] 2026-04-22 17:51:16,059 | INFO     | all workflow threads have been joined
[2026-04-22 19:51:16] 2026-04-22 17:51:16,059 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-22 19:51:16] 2026-04-22 17:51:16,059 | INFO     | traces error code: 0
[2026-04-22 19:51:16] 2026-04-22 17:51:16,059 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-22 19:51:16] 2026-04-22 17:51:16,157 [wrapper] ==== pilot stdout END ====
[2026-04-22 19:51:16] 2026-04-22 17:51:16,160 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-22 19:51:16] 2026-04-22 17:51:16,163 [wrapper] pilotpid: 3218604
[2026-04-22 19:51:16] 2026-04-22 17:51:16,166 [wrapper] Pilot exit status: 0
[2026-04-22 19:51:16] 2026-04-22 17:51:16,175 [wrapper] pandaids: 7105339493
[2026-04-22 19:51:16] 2026-04-22 17:51:16,276 [wrapper] cleanup supervisor_pilot 3441313 3218605
[2026-04-22 19:51:16] 2026-04-22 17:51:16,279 [wrapper] Test setup, not cleaning
[2026-04-22 19:51:16] 2026-04-22 17:51:16,283 [wrapper] apfmon messages muted
[2026-04-22 19:51:16] 2026-04-22 17:51:16,286 [wrapper] ==== wrapper stdout END ====
[2026-04-22 19:51:16] 2026-04-22 17:51:16,288 [wrapper] ==== wrapper stderr END ====
[2026-04-22 19:51:16]  *** Error codes and diagnostics ***
[2026-04-22 19:51:16]     "exeErrorCode": 0,
[2026-04-22 19:51:16]     "pilotErrorCode": 0,
[2026-04-22 19:51:16]  *** Listing of results directory ***
[2026-04-22 19:51:16] total 2436828
[2026-04-22 19:51:16] -rwx------. 1 boinc boinc      36322 Apr 21 13:04 runpilot2-wrapper.sh
[2026-04-22 19:51:16] -rw-r--r--. 1 boinc boinc     644190 Apr 21 13:09 pilot3.tar.gz
[2026-04-22 19:51:16] -rw-r--r--. 1 boinc boinc       5094 Apr 21 13:15 queuedata.json
[2026-04-22 19:51:16] -rw-r--r--. 1 boinc boinc        100 Apr 22 17:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-22 19:51:16] -rwxr-xr-x. 1 boinc boinc       7986 Apr 22 17:03 run_atlas
[2026-04-22 19:51:16] -rw-r--r--. 1 boinc boinc        105 Apr 22 17:03 job.xml
[2026-04-22 19:51:16] -rw-r--r--. 2 boinc boinc 2218328661 Apr 22 17:03 EVNT.49820242._000042.pool.root.1
[2026-04-22 19:51:16] -rw-r--r--. 1 boinc boinc       6540 Apr 22 17:03 init_data.xml
[2026-04-22 19:51:16] -rw-r--r--. 2 boinc boinc      15665 Apr 22 17:03 start_atlas.sh
[2026-04-22 19:51:16] drwxrwx--x. 2 boinc boinc       4096 Apr 22 17:03 shared
[2026-04-22 19:51:16] -rw-r--r--. 2 boinc boinc     656926 Apr 22 17:03 input.tar.gz
[2026-04-22 19:51:16] -rw-r--r--. 1 boinc boinc          0 Apr 22 17:03 boinc_lockfile
[2026-04-22 19:51:16] -rw-r--r--. 1 boinc boinc       2551 Apr 22 17:03 pandaJob.out
[2026-04-22 19:51:16] -rw-------. 1 boinc boinc     997131 Apr 22 17:03 agis_schedconf.cvmfs.json
[2026-04-22 19:51:16] -rw-------. 1 boinc boinc    1509089 Apr 22 17:03 agis_ddmendpoints.agis.ALL.json
[2026-04-22 19:51:16] -rw-------. 1 boinc boinc        443 Apr 22 17:03 workernode_map.json
[2026-04-22 19:51:16] drwx------. 5 boinc boinc       4096 Apr 22 17:03 pilot3
[2026-04-22 19:51:16] -rw-------. 1 boinc boinc  270234754 Apr 22 19:50 HITS.49820244._014290.pool.root.1
[2026-04-22 19:51:16] -rw-r--r--. 1 boinc boinc        488 Apr 22 19:50 boinc_task_state.xml
[2026-04-22 19:51:16] -rw-------. 1 boinc boinc       1028 Apr 22 19:50 memory_monitor_summary.json
[2026-04-22 19:51:16] -rw-------. 1 boinc boinc     409379 Apr 22 19:50 log.49820244._014290.job.log.tgz.1
[2026-04-22 19:51:16] -rw-------. 1 boinc boinc       6364 Apr 22 19:50 heartbeat_new.json
[2026-04-22 19:51:16] -rw-------. 1 boinc boinc       6255 Apr 22 19:50 heartbeat.json
[2026-04-22 19:51:16] -rw-r--r--. 1 boinc boinc       8192 Apr 22 19:50 boinc_mmap_file
[2026-04-22 19:51:16] -rw-r--r--. 1 boinc boinc         27 Apr 22 19:50 wrapper_checkpoint.txt
[2026-04-22 19:51:16] -rw-------. 1 boinc boinc         95 Apr 22 19:51 pilot_heartbeat.json
[2026-04-22 19:51:16] -rw-------. 1 boinc boinc       4900 Apr 22 19:51 pilotlog.txt
[2026-04-22 19:51:16] -rw-------. 1 boinc boinc     937795 Apr 22 19:51 log.49820244._014290.job.log.1
[2026-04-22 19:51:16] -rw-------. 1 boinc boinc        357 Apr 22 19:51 output.list
[2026-04-22 19:51:16] -rw-r--r--. 1 boinc boinc        410 Apr 22 19:51 runtime_log
[2026-04-22 19:51:16] -rw-------. 1 boinc boinc    1361920 Apr 22 19:51 result.tar.gz
[2026-04-22 19:51:16] -rw-r--r--. 1 boinc boinc       8827 Apr 22 19:51 runtime_log.err
[2026-04-22 19:51:16] -rw-------. 1 boinc boinc        664 Apr 22 19:51 59d37e6a8aa1.diag
[2026-04-22 19:51:16] -rw-r--r--. 1 boinc boinc      20800 Apr 22 19:51 stderr.txt
[2026-04-22 19:51:16] HITS file was successfully produced:
[2026-04-22 19:51:16] -rw-------. 1 boinc boinc 270234754 Apr 22 19:50 shared/HITS.pool.root.1
[2026-04-22 19:51:16]  *** Contents of shared directory: ***
[2026-04-22 19:51:16] total 2432244
[2026-04-22 19:51:16] -rw-r--r--. 2 boinc boinc 2218328661 Apr 22 17:03 ATLAS.root_0
[2026-04-22 19:51:16] -rw-r--r--. 2 boinc boinc      15665 Apr 22 17:03 start_atlas.sh
[2026-04-22 19:51:16] -rw-r--r--. 2 boinc boinc     656926 Apr 22 17:03 input.tar.gz
[2026-04-22 19:51:16] -rw-------. 1 boinc boinc  270234754 Apr 22 19:50 HITS.pool.root.1
[2026-04-22 19:51:16] -rw-------. 1 boinc boinc    1361920 Apr 22 19:51 result.tar.gz
19:51:17 (3214094): run_atlas exited; CPU time 39062.120562
19:51:17 (3214094): called boinc_finish(0)

</stderr_txt>
]]>

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