Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:22:59 (19950): wrapper (7.7.26015): starting
10:22:59 (19950): wrapper: running run_atlas (--nthreads 8)
[2026-04-21 10:22:59] Arguments: --nthreads 8
[2026-04-21 10:22:59] Threads: 8
[2026-04-21 10:22:59] Checking for CVMFS
[2026-04-21 10:22:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-21 10:22:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-21 10:22:59] Running cvmfs_config stat atlas.cern.ch
[2026-04-21 10:22:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-21 10:22:59] 2.11.2.0 2800 35236 77008 158693 0 1 10229494 20275200 1 130560 0 6967982 99.845 1747647 29354 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-21 10:22:59] CVMFS is ok
[2026-04-21 10:22:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 10:22:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 10:22:59] Further information can be found at the LHC@home message board.
[2026-04-21 10:22:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 10:22:59] Checking for apptainer binary...
[2026-04-21 10:22:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-21 10:22:59] Running /usr/bin/apptainer --version
[2026-04-21 10:22:59] apptainer version 1.3.2-1.el7
[2026-04-21 10:22:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 10:23:01] c-204-3.aglt2.org
[2026-04-21 10:23:01] apptainer works
[2026-04-21 10:23:01] Set ATHENA_PROC_NUMBER=8
[2026-04-21 10:23:01] Set ATHENA_CORE_NUMBER=8
[2026-04-21 10:23:01] Starting ATLAS job with PandaID=7105339441
[2026-04-21 10:23:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-21 14:05:04]  *** The last 200 lines of the pilot log: ***
[2026-04-21 14:05:04] 2026-04-21 18:04:32,373 | INFO     | job 7105339441 has state=finished
[2026-04-21 14:05:04] 2026-04-21 18:04:32,374 | INFO     | preparing for final server update for job 7105339441 in state='finished'
[2026-04-21 14:05:04] 2026-04-21 18:04:32,374 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7105339441/jobReport.json
[2026-04-21 14:05:04] 2026-04-21 18:04:32,377 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-04-21 14:05:04] 2026-04-21 18:04:32,378 | INFO     | this job has now completed (state=finished)
[2026-04-21 14:05:04] 2026-04-21 18:04:32,378 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-21 14:05:04] 2026-04-21 18:04:32,378 | INFO     | log transfer has been attempted: DONE
[2026-04-21 14:05:04] 2026-04-21 18:04:32,378 | INFO     | job 7105339441 has finished - writing final server update
[2026-04-21 14:05:04] 2026-04-21 18:04:32,379 | INFO     | total number of processed events: 400 (read)
[2026-04-21 14:05:04] 2026-04-21 18:04:32,381 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7105339441/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 14:05:04] 2026-04-21 18:04:32,382 | INFO     | extracted standard info from prmon json
[2026-04-21 14:05:04] 2026-04-21 18:04:32,382 | INFO     | extracted standard memory fields from prmon json
[2026-04-21 14:05:04] 2026-04-21 18:04:32,383 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-21 14:05:04] 2026-04-21 18:04:32,383 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-21 14:05:04] 2026-04-21 18:04:32,387 | INFO     | fitting pss+swap vs Time
[2026-04-21 14:05:04] 2026-04-21 18:04:32,387 | INFO     | sum of square deviations: 3168461268.0
[2026-04-21 14:05:04] 2026-04-21 18:04:32,388 | INFO     | sum of deviations: -16047092367.999994
[2026-04-21 14:05:04] 2026-04-21 18:04:32,389 | INFO     | mean x (centered): 0.0
[2026-04-21 14:05:04] 2026-04-21 18:04:32,389 | INFO     | mean y: 2603175.33640553
[2026-04-21 14:05:04] 2026-04-21 18:04:32,389 | INFO     | intersect: 2603175.33640553
[2026-04-21 14:05:04] 2026-04-21 18:04:32,389 | INFO     | chi2: 1.796574484542116
[2026-04-21 14:05:04] 2026-04-21 18:04:32,390 | INFO     | sum of square deviations: 2954447953.0
[2026-04-21 14:05:04] 2026-04-21 18:04:32,391 | INFO     | sum of deviations: -15228553864.0
[2026-04-21 14:05:04] 2026-04-21 18:04:32,391 | INFO     | mean x (centered): 0.0
[2026-04-21 14:05:04] 2026-04-21 18:04:32,391 | INFO     | mean y: 2603758.0
[2026-04-21 14:05:04] 2026-04-21 18:04:32,391 | INFO     | intersect: 2603758.0
[2026-04-21 14:05:04] 2026-04-21 18:04:32,392 | INFO     | chi2: 1.7960261834085185
[2026-04-21 14:05:04] 2026-04-21 18:04:32,392 | INFO     | current chi2=1.7960261834085185 (change=0.03051925418707864 %)
[2026-04-21 14:05:04] 2026-04-21 18:04:32,392 | INFO     | right removable region: 211
[2026-04-21 14:05:04] 2026-04-21 18:04:32,392 | INFO     | sum of square deviations: 2954447953.0
[2026-04-21 14:05:04] 2026-04-21 18:04:32,393 | INFO     | sum of deviations: -52237457573.50003
[2026-04-21 14:05:04] 2026-04-21 18:04:32,394 | INFO     | mean x (centered): 0.0
[2026-04-21 14:05:04] 2026-04-21 18:04:32,394 | INFO     | mean y: 2628704.8349056602
[2026-04-21 14:05:04] 2026-04-21 18:04:32,394 | INFO     | intersect: 2628704.8349056602
[2026-04-21 14:05:04] 2026-04-21 18:04:32,394 | INFO     | chi2: 0.21493334348205478
[2026-04-21 14:05:04] 2026-04-21 18:04:32,394 | INFO     | current chi2=0.21493334348205478 (change=88.03649137114213 %)
[2026-04-21 14:05:04] 2026-04-21 18:04:32,395 | INFO     | sum of square deviations: 2750295288.0
[2026-04-21 14:05:04] 2026-04-21 18:04:32,396 | INFO     | sum of deviations: -52648345308.0
[2026-04-21 14:05:04] 2026-04-21 18:04:32,396 | INFO     | mean x (centered): 0.0
[2026-04-21 14:05:04] 2026-04-21 18:04:32,396 | INFO     | mean y: 2628968.106280193
[2026-04-21 14:05:04] 2026-04-21 18:04:32,396 | INFO     | intersect: 2628968.106280193
[2026-04-21 14:05:04] 2026-04-21 18:04:32,397 | INFO     | chi2: 0.18849589471343592
[2026-04-21 14:05:04] 2026-04-21 18:04:32,397 | INFO     | current chi2=0.18849589471343592 (change=12.300301265646194 %)
[2026-04-21 14:05:04] 2026-04-21 18:04:32,397 | INFO     | left removable region: 10
[2026-04-21 14:05:04] 2026-04-21 18:04:32,398 | INFO     | sum of square deviations: 2518000700.0
[2026-04-21 14:05:04] 2026-04-21 18:04:32,399 | INFO     | sum of deviations: -50744392690.0
[2026-04-21 14:05:04] 2026-04-21 18:04:32,399 | INFO     | mean x (centered): 0.0
[2026-04-21 14:05:04] 2026-04-21 18:04:32,399 | INFO     | mean y: 2630467.472636816
[2026-04-21 14:05:04] 2026-04-21 18:04:32,399 | INFO     | intersect: 2630467.472636816
[2026-04-21 14:05:04] 2026-04-21 18:04:32,399 | INFO     | chi2: 0.18417129327874918
[2026-04-21 14:05:04] 2026-04-21 18:04:32,400 | INFO     | current memory leak: -20.15 B/s (using 201 data points, chi2=0.18)
[2026-04-21 14:05:04] 2026-04-21 18:04:32,400 | INFO     | could have reported an average CPU frequency of 1662 MHz (11 samples)
[2026-04-21 14:05:04] 2026-04-21 18:04:32,400 | INFO     | ..............................
[2026-04-21 14:05:04] 2026-04-21 18:04:32,400 | INFO     | . Timing measurements:
[2026-04-21 14:05:04] 2026-04-21 18:04:32,400 | INFO     | . get job = 0 s
[2026-04-21 14:05:04] 2026-04-21 18:04:32,401 | INFO     | . initial setup = 9 s
[2026-04-21 14:05:04] 2026-04-21 18:04:32,401 | INFO     | . payload setup = 18 s
[2026-04-21 14:05:04] 2026-04-21 18:04:32,401 | INFO     | . stage-in = 0 s
[2026-04-21 14:05:04] 2026-04-21 18:04:32,401 | INFO     | . payload execution = 13225 s
[2026-04-21 14:05:04] 2026-04-21 18:04:32,401 | INFO     | . stage-out = 2 s
[2026-04-21 14:05:04] 2026-04-21 18:04:32,401 | INFO     | . log creation = 0 s
[2026-04-21 14:05:04] 2026-04-21 18:04:32,401 | INFO     | ..............................
[2026-04-21 14:05:04] 2026-04-21 18:04:32,543 | INFO     | 
[2026-04-21 14:05:04] 2026-04-21 18:04:32,543 | INFO     | job summary report
[2026-04-21 14:05:04] 2026-04-21 18:04:32,544 | INFO     | --------------------------------------------------
[2026-04-21 14:05:04] 2026-04-21 18:04:32,544 | INFO     | PanDA job id: 7105339441
[2026-04-21 14:05:04] 2026-04-21 18:04:32,544 | INFO     | task id: 49820244
[2026-04-21 14:05:04] 2026-04-21 18:04:32,544 | INFO     | errors: (none)
[2026-04-21 14:05:04] 2026-04-21 18:04:32,544 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-21 14:05:04] 2026-04-21 18:04:32,544 | INFO     | pilot state: finished 
[2026-04-21 14:05:04] 2026-04-21 18:04:32,545 | INFO     | transexitcode: 0
[2026-04-21 14:05:04] 2026-04-21 18:04:32,545 | INFO     | exeerrorcode: 0
[2026-04-21 14:05:04] 2026-04-21 18:04:32,545 | INFO     | exeerrordiag: 
[2026-04-21 14:05:04] 2026-04-21 18:04:32,545 | INFO     | exitcode: 0
[2026-04-21 14:05:04] 2026-04-21 18:04:32,545 | INFO     | exitmsg: OK
[2026-04-21 14:05:04] 2026-04-21 18:04:32,545 | INFO     | cpuconsumptiontime: 100173 s
[2026-04-21 14:05:04] 2026-04-21 18:04:32,546 | INFO     | nevents: 400
[2026-04-21 14:05:04] 2026-04-21 18:04:32,546 | INFO     | neventsw: 0
[2026-04-21 14:05:04] 2026-04-21 18:04:32,546 | INFO     | pid: 28148
[2026-04-21 14:05:04] 2026-04-21 18:04:32,546 | INFO     | pgrp: 28148
[2026-04-21 14:05:04] 2026-04-21 18:04:32,546 | INFO     | corecount: 8
[2026-04-21 14:05:04] 2026-04-21 18:04:32,546 | INFO     | event service: False
[2026-04-21 14:05:04] 2026-04-21 18:04:32,547 | INFO     | sizes: {0: 2274805, 1: 2276379, 11: 2276407, 13247: 2306687, 13248: 2306686, 13250: 2315740, 13252: 2315924, 13253: 2316118}
[2026-04-21 14:05:04] 2026-04-21 18:04:32,547 | INFO     | --------------------------------------------------
[2026-04-21 14:05:04] 2026-04-21 18:04:32,547 | INFO     | 
[2026-04-21 14:05:04] 2026-04-21 18:04:32,547 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-21 14:05:04] 2026-04-21 18:04:32,575 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-21 14:05:04] 2026-04-21 18:04:32,575 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-21 14:05:04] 2026-04-21 18:04:32,576 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-21 14:05:04] 2026-04-21 18:04:32,576 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-21 14:05:04] 2026-04-21 18:04:32,576 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-21 14:05:04] 2026-04-21 18:04:32,576 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-21 14:05:04] 2026-04-21 18:04:32,576 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-21 14:05:04] 2026-04-21 18:04:32,577 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-21 14:05:04] 2026-04-21 18:04:32,577 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-21 14:05:04] 2026-04-21 18:04:32,577 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-21 14:05:04] 2026-04-21 18:04:32,577 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-21 14:05:04] 2026-04-21 18:04:32,578 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-21 14:05:04] 2026-04-21 18:04:32,578 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-21 14:05:04] 2026-04-21 18:04:32,578 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-21 14:05:04] 2026-04-21 18:04:32,578 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-21 14:05:04] 2026-04-21 18:04:32,578 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-21 14:05:04] 2026-04-21 18:04:32,579 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-21 14:05:04] 2026-04-21 18:04:32,579 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-21 14:05:04] 2026-04-21 18:04:32,579 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-21 14:05:04] 2026-04-21 18:04:32,579 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-21 14:05:04] 2026-04-21 18:04:32,580 | INFO     | job 7105339441 has completed (purged errors)
[2026-04-21 14:05:04] 2026-04-21 18:04:32,580 | INFO     | overall cleanup function is called
[2026-04-21 14:05:04] 2026-04-21 18:04:33,096 | WARNING  | process 28148 can no longer be monitored (due to stat problems) - aborting
[2026-04-21 14:05:04] 2026-04-21 18:04:33,172 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 14:05:04] 2026-04-21 18:04:33,260 | INFO     | number of running child processes to parent process 28148: 1
[2026-04-21 14:05:04] 2026-04-21 18:04:33,261 | INFO     | maximum number of monitored processes: 6
[2026-04-21 14:05:04] 2026-04-21 18:04:33,261 | INFO     | aborting job monitoring since job object (job id=7105339441) has expired
[2026-04-21 14:05:04] 2026-04-21 18:04:33,589 | INFO     | --- collectZombieJob: --- 10, [28148]
[2026-04-21 14:05:04] 2026-04-21 18:04:33,589 | INFO     | zombie collector waiting for pid 28148
[2026-04-21 14:05:04] 2026-04-21 18:04:33,589 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-21 14:05:04] 2026-04-21 18:04:33,590 | INFO     | collected zombie processes
[2026-04-21 14:05:04] 2026-04-21 18:04:33,590 | INFO     | will attempt to kill all subprocesses of pid=28148
[2026-04-21 14:05:04] 2026-04-21 18:04:33,678 | INFO     | process IDs to be killed: [28148] (in reverse order)
[2026-04-21 14:05:04] 2026-04-21 18:04:33,734 | WARNING  | found no corresponding commands to process id(s)
[2026-04-21 14:05:04] 2026-04-21 18:04:33,735 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-21 14:05:04] 2026-04-21 18:04:33,739 | INFO     | did not find any defunct processes belonging to 28148
[2026-04-21 14:05:04] 2026-04-21 18:04:33,743 | INFO     | did not find any defunct processes belonging to 28148
[2026-04-21 14:05:04] 2026-04-21 18:04:33,743 | INFO     | Ready for new job
[2026-04-21 14:05:04] 2026-04-21 18:04:33,745 | INFO     | **************************************
[2026-04-21 14:05:04] 2026-04-21 18:04:33,745 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-21 14:05:04] 2026-04-21 18:04:33,745 | INFO     | **************************************
[2026-04-21 14:05:04] 2026-04-21 18:04:33,746 | INFO     | 
[2026-04-21 14:05:04] 2026-04-21 18:04:33,746 | INFO     | architecture information:
[2026-04-21 14:05:04] 2026-04-21 18:04:33,747 | INFO     | executing command: cat /etc/os-release
[2026-04-21 14:05:04] 2026-04-21 18:04:33,764 | INFO     | cat /etc/os-release:
[2026-04-21 14:05:04] NAME="CentOS Linux"
[2026-04-21 14:05:04] VERSION="7 (Core)"
[2026-04-21 14:05:04] ID="centos"
[2026-04-21 14:05:04] ID_LIKE="rhel fedora"
[2026-04-21 14:05:04] VERSION_ID="7"
[2026-04-21 14:05:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-21 14:05:04] ANSI_COLOR="0;31"
[2026-04-21 14:05:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-21 14:05:04] HOME_URL="https://www.centos.org/"
[2026-04-21 14:05:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-21 14:05:04] 
[2026-04-21 14:05:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-21 14:05:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-21 14:05:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-21 14:05:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-21 14:05:04] 
[2026-04-21 14:05:04] 2026-04-21 18:04:33,765 | INFO     | **************************************
[2026-04-21 14:05:04] 2026-04-21 18:04:34,268 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-21 14:05:04] 2026-04-21 18:04:34,286 | INFO     | sufficient remaining disk space (14458814464 B)
[2026-04-21 14:05:04] 2026-04-21 18:04:34,286 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-21 14:05:04] 2026-04-21 18:04:34,287 | INFO     | current server update state: UPDATING_FINAL
[2026-04-21 14:05:04] 2026-04-21 18:04:34,287 | INFO     | update_server=False
[2026-04-21 14:05:04] 2026-04-21 18:04:34,287 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-21 14:05:04] 2026-04-21 18:04:34,288 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-21 14:05:04] 2026-04-21 18:04:34,288 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-21 14:05:04] 2026-04-21 18:04:34,288 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-21 14:05:04] 2026-04-21 18:04:34,289 | INFO     | aborting loop
[2026-04-21 14:05:04] 2026-04-21 18:04:34,321 | INFO     | all job control threads have been joined
[2026-04-21 14:05:04] 2026-04-21 18:04:34,393 | INFO     | all data control threads have been joined
[2026-04-21 14:05:04] 2026-04-21 18:04:35,291 | INFO     | [job] retrieve thread has finished
[2026-04-21 14:05:04] 2026-04-21 18:04:35,294 | INFO     | [job] queue monitor thread has finished
[2026-04-21 14:05:04] 2026-04-21 18:04:35,295 | INFO     | [job] job monitor thread has finished
[2026-04-21 14:05:04] 2026-04-21 18:04:35,325 | INFO     | [job] control thread has finished
[2026-04-21 14:05:04] 2026-04-21 18:04:35,351 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-21 14:05:04] 2026-04-21 18:04:35,399 | INFO     | [data] control thread has finished
[2026-04-21 14:05:04] 2026-04-21 18:04:35,531 | INFO     | all payload control threads have been joined
[2026-04-21 14:05:04] 2026-04-21 18:04:35,578 | INFO     | [payload] validate_pre thread has finished
[2026-04-21 14:05:04] 2026-04-21 18:04:35,585 | INFO     | [data] copytool_in thread has finished
[2026-04-21 14:05:04] 2026-04-21 18:04:35,856 | INFO     | [payload] execute_payloads thread has finished
[2026-04-21 14:05:04] 2026-04-21 18:04:35,931 | INFO     | [payload] failed_post thread has finished
[2026-04-21 14:05:04] 2026-04-21 18:04:36,041 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-21 14:05:04] 2026-04-21 18:04:36,439 | INFO     | [job] create_data_payload thread has finished
[2026-04-21 14:05:04] 2026-04-21 18:04:36,442 | INFO     | [payload] validate_post thread has finished
[2026-04-21 14:05:04] 2026-04-21 18:04:36,536 | INFO     | [payload] control thread has finished
[2026-04-21 14:05:04] 2026-04-21 18:04:36,735 | INFO     | [job] validate thread has finished
[2026-04-21 14:05:04] 2026-04-21 18:04:37,356 | INFO     | [data] copytool_out thread has finished
[2026-04-21 14:05:04] 2026-04-21 18:04:38,294 | INFO     | [data] queue_monitor thread has finished
[2026-04-21 14:05:04] 2026-04-21 18:04:49,536 | INFO     | [monitor] cgroup control has ended
[2026-04-21 14:05:04] 2026-04-21 18:04:50,749 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140413014517568)>', '<ExcThread(monitor, started 140412144580352)>']
[2026-04-21 14:05:04] 2026-04-21 18:04:55,776 | INFO     | all workflow threads have been joined
[2026-04-21 14:05:04] 2026-04-21 18:04:55,777 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-21 14:05:04] 2026-04-21 18:04:55,779 | INFO     | traces error code: 0
[2026-04-21 14:05:04] 2026-04-21 18:04:55,780 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-21 14:05:04] 2026-04-21 18:05:04,401 | INFO     | PID=23753 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-21 14:05:04] 2026-04-21 18:05:04,401 | INFO     | found 0 job(s) in 20 queues
[2026-04-21 14:05:04] 2026-04-21 18:05:04,401 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-21 14:05:04] 2026-04-21 18:05:04,402 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-21 14:05:04] 2026-04-21 18:05:04,402 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-21 14:05:04] 2026-04-21 18:05:04,402 | INFO     | [monitor] control thread has ended
[2026-04-21 14:05:04] 2026-04-21 18:05:04,525 [wrapper] ==== pilot stdout END ====
[2026-04-21 14:05:04] 2026-04-21 18:05:04,529 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-21 14:05:04] 2026-04-21 18:05:04,533 [wrapper] pilotpid: 23753
[2026-04-21 14:05:04] 2026-04-21 18:05:04,537 [wrapper] Pilot exit status: 0
[2026-04-21 14:05:04] 2026-04-21 18:05:04,551 [wrapper] pandaids: 7105339441
[2026-04-21 14:05:04] 2026-04-21 18:05:04,590 [wrapper] cleanup supervisor_pilot  6574 23754
[2026-04-21 14:05:04] 2026-04-21 18:05:04,594 [wrapper] Test setup, not cleaning
[2026-04-21 14:05:04] 2026-04-21 18:05:04,598 [wrapper] apfmon messages muted
[2026-04-21 14:05:04] 2026-04-21 18:05:04,602 [wrapper] ==== wrapper stdout END ====
[2026-04-21 14:05:04] 2026-04-21 18:05:04,606 [wrapper] ==== wrapper stderr END ====
[2026-04-21 14:05:04]  *** Error codes and diagnostics ***
[2026-04-21 14:05:04]     "exeErrorCode": 0,
[2026-04-21 14:05:04]     "pilotErrorCode": 0,
[2026-04-21 14:05:04]  *** Listing of results directory ***
[2026-04-21 14:05:04] total 2449204
[2026-04-21 14:05:04] -rwx------ 1 boincer umatlas      36322 Apr 21 07:04 runpilot2-wrapper.sh
[2026-04-21 14:05:04] -rw-r--r-- 1 boincer umatlas       5094 Apr 21 07:09 queuedata.json
[2026-04-21 14:05:04] -rw-r--r-- 1 boincer umatlas     644190 Apr 21 07:09 pilot3.tar.gz
[2026-04-21 14:05:04] -rw-r--r-- 1 boincer umatlas        100 Apr 21 10:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-21 14:05:04] -rwxr-xr-x 1 boincer umatlas       7986 Apr 21 10:22 run_atlas
[2026-04-21 14:05:04] -rw-r--r-- 1 boincer umatlas        105 Apr 21 10:22 job.xml
[2026-04-21 14:05:04] -rw-r--r-- 2 boincer umatlas 2218882853 Apr 21 10:22 EVNT.49820242._000037.pool.root.1
[2026-04-21 14:05:04] -rw-r--r-- 2 boincer umatlas      15665 Apr 21 10:22 start_atlas.sh
[2026-04-21 14:05:04] drwxrwx--x 2 boincer umatlas       4096 Apr 21 10:22 shared
[2026-04-21 14:05:04] -rw-r--r-- 2 boincer umatlas     656923 Apr 21 10:22 input.tar.gz
[2026-04-21 14:05:04] -rw-r--r-- 1 boincer umatlas          0 Apr 21 10:22 boinc_lockfile
[2026-04-21 14:05:04] -rw-r--r-- 1 boincer umatlas       2551 Apr 21 10:23 pandaJob.out
[2026-04-21 14:05:04] -rw------- 1 boincer umatlas         57 Apr 21 10:23 setup.sh.local
[2026-04-21 14:05:04] -rw------- 1 boincer umatlas     994513 Apr 21 10:23 agis_schedconf.cvmfs.json
[2026-04-21 14:05:04] -rw------- 1 boincer umatlas        430 Apr 21 10:23 workernode_map.json
[2026-04-21 14:05:04] drwx------ 5 boincer umatlas       4096 Apr 21 10:23 pilot3
[2026-04-21 14:05:04] -rw-r--r-- 1 boincer umatlas       5827 Apr 21 14:01 init_data.xml
[2026-04-21 14:05:04] -rw------- 1 boincer umatlas  281644213 Apr 21 14:03 HITS.49820244._014238.pool.root.1
[2026-04-21 14:05:04] -rw-r--r-- 1 boincer umatlas        490 Apr 21 14:03 boinc_task_state.xml
[2026-04-21 14:05:04] -rw------- 1 boincer umatlas       1050 Apr 21 14:04 memory_monitor_summary.json
[2026-04-21 14:05:04] -rw------- 1 boincer umatlas    1509089 Apr 21 14:04 agis_ddmendpoints.agis.ALL.json
[2026-04-21 14:05:04] -rw------- 1 boincer umatlas     506070 Apr 21 14:04 log.49820244._014238.job.log.tgz.1
[2026-04-21 14:05:04] -rw------- 1 boincer umatlas         95 Apr 21 14:04 pilot_heartbeat.json
[2026-04-21 14:05:04] -rw------- 1 boincer umatlas       6438 Apr 21 14:04 heartbeat_new.json
[2026-04-21 14:05:04] -rw------- 1 boincer umatlas       6329 Apr 21 14:04 heartbeat.json
[2026-04-21 14:05:04] -rw-r--r-- 1 boincer umatlas         29 Apr 21 14:04 wrapper_checkpoint.txt
[2026-04-21 14:05:04] -rw-r--r-- 1 boincer umatlas       8192 Apr 21 14:04 boinc_mmap_file
[2026-04-21 14:05:04] -rw------- 1 boincer umatlas        745 Apr 21 14:05 pilotlog.txt
[2026-04-21 14:05:04] -rw------- 1 boincer umatlas    1198733 Apr 21 14:05 log.49820244._014238.job.log.1
[2026-04-21 14:05:04] -rw------- 1 boincer umatlas        357 Apr 21 14:05 output.list
[2026-04-21 14:05:04] -rw-r--r-- 1 boincer umatlas        410 Apr 21 14:05 runtime_log
[2026-04-21 14:05:04] -rw------- 1 boincer umatlas    1720320 Apr 21 14:05 result.tar.gz
[2026-04-21 14:05:04] -rw-r--r-- 1 boincer umatlas       8959 Apr 21 14:05 runtime_log.err
[2026-04-21 14:05:04] -rw------- 1 boincer umatlas        663 Apr 21 14:05 59c93b44f9fe.diag
[2026-04-21 14:05:04] -rw-r--r-- 1 boincer umatlas      21209 Apr 21 14:05 stderr.txt
[2026-04-21 14:05:04] HITS file was successfully produced:
[2026-04-21 14:05:04] -rw------- 1 boincer umatlas 281644213 Apr 21 14:03 shared/HITS.pool.root.1
[2026-04-21 14:05:04]  *** Contents of shared directory: ***
[2026-04-21 14:05:04] total 2444272
[2026-04-21 14:05:04] -rw-r--r-- 2 boincer umatlas 2218882853 Apr 21 10:22 ATLAS.root_0
[2026-04-21 14:05:04] -rw-r--r-- 2 boincer umatlas      15665 Apr 21 10:22 start_atlas.sh
[2026-04-21 14:05:04] -rw-r--r-- 2 boincer umatlas     656923 Apr 21 10:22 input.tar.gz
[2026-04-21 14:05:04] -rw------- 1 boincer umatlas  281644213 Apr 21 14:03 HITS.pool.root.1
[2026-04-21 14:05:04] -rw------- 1 boincer umatlas    1720320 Apr 21 14:05 result.tar.gz
14:05:05 (19950): run_atlas exited; CPU time 100084.075446
14:05:05 (19950): called boinc_finish(0)

</stderr_txt>
]]>

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