Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:57:16 (1177943): wrapper (7.7.26015): starting
09:57:16 (1177943): wrapper: running run_atlas (--nthreads 8)
[2026-04-21 09:57:16] Arguments: --nthreads 8
[2026-04-21 09:57:16] Threads: 8
[2026-04-21 09:57:16] Checking for CVMFS
[2026-04-21 09:57:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-21 09:57:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-21 09:57:16] Running cvmfs_config stat atlas.cern.ch
[2026-04-21 09:57:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-21 09:57:17] 2.13.3.0 17047 59089 289020 158691 0 812 23416842 32935936 30581 16776704 0 832634778 99.799 587581514 38407 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-21 09:57:17] CVMFS is ok
[2026-04-21 09:57:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 09:57:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 09:57:17] Further information can be found at the LHC@home message board.
[2026-04-21 09:57:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 09:57:17] Checking for apptainer binary...
[2026-04-21 09:57:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-21 09:57:17] Running /usr/bin/apptainer --version
[2026-04-21 09:57:17] apptainer version 1.4.5-2.el9
[2026-04-21 09:57:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 09:57:17] c7-9-15.aglt2.org
[2026-04-21 09:57:17] apptainer works
[2026-04-21 09:57:17] Set ATHENA_PROC_NUMBER=8
[2026-04-21 09:57:17] Set ATHENA_CORE_NUMBER=8
[2026-04-21 09:57:17] Starting ATLAS job with PandaID=7105149939
[2026-04-21 09:57:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-21 11:29:56]  *** The last 200 lines of the pilot log: ***
[2026-04-21 11:29:56]  guid=fc2ce30a-2f7a-4429-9eb6-3da972d5d0ac
[2026-04-21 11:29:56]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-21 11:29:56]  is_altstaged=None
[2026-04-21 11:29:56]  is_tar=False
[2026-04-21 11:29:56]  lfn=log.49820375._010211.job.log.tgz.1
[2026-04-21 11:29:56]  mtime=0
[2026-04-21 11:29:56]  protocol_id=None
[2026-04-21 11:29:56]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-21 11:29:56]  replicas=None
[2026-04-21 11:29:56]  scope=mc23_13p6TeV
[2026-04-21 11:29:56]  status=None
[2026-04-21 11:29:56]  status_code=0
[2026-04-21 11:29:56]  storage_token=
[2026-04-21 11:29:56]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7105149939/log.49820375._010211.job.log.tgz.1
[2026-04-21 11:29:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f6/aa/log.49820375._010211.job.log.tgz.1
[2026-04-21 11:29:56]  workdir=None
[2026-04-21 11:29:56] ]
[2026-04-21 11:29:56] 2026-04-21 15:29:22,209 | INFO     | transferring file log.49820375._010211.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7105149939/log.49820375._010211.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-04-21 11:29:56] 2026-04-21 15:29:22,209 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7105149939/log.49820375._010211.job.log.tgz.1 /tmp/boinchome/slots/0/log.49820375._010211.job
[2026-04-21 11:29:56] 2026-04-21 15:29:22,229 | INFO     | adding to output.list: log.49820375._010211.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f6/aa/log.49820375._010211.job.log.tg
[2026-04-21 11:29:56] 2026-04-21 15:29:22,229 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-21 11:29:56] 2026-04-21 15:29:22,230 | INFO     | summary of transferred files:
[2026-04-21 11:29:56] 2026-04-21 15:29:22,230 | INFO     |  -- lfn=log.49820375._010211.job.log.tgz.1, status_code=0, status=transferred
[2026-04-21 11:29:56] 2026-04-21 15:29:22,230 | INFO     | stage-out finished correctly
[2026-04-21 11:29:56] 2026-04-21 15:29:22,283 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-21 11:29:56] 2026-04-21 15:29:22,839 | INFO     | job 7105149939 has state=finished
[2026-04-21 11:29:56] 2026-04-21 15:29:22,839 | INFO     | preparing for final server update for job 7105149939 in state='finished'
[2026-04-21 11:29:56] 2026-04-21 15:29:22,840 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7105149939/jobReport.json
[2026-04-21 11:29:56] 2026-04-21 15:29:22,841 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-04-21 11:29:56] 2026-04-21 15:29:22,841 | INFO     | this job has now completed (state=finished)
[2026-04-21 11:29:56] 2026-04-21 15:29:22,841 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-21 11:29:56] 2026-04-21 15:29:22,841 | INFO     | log transfer has been attempted: DONE
[2026-04-21 11:29:56] 2026-04-21 15:29:22,841 | INFO     | job 7105149939 has finished - writing final server update
[2026-04-21 11:29:56] 2026-04-21 15:29:22,842 | INFO     | total number of processed events: 400 (read)
[2026-04-21 11:29:56] 2026-04-21 15:29:22,854 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7105149939/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 11:29:56] 2026-04-21 15:29:22,854 | INFO     | extracted standard info from prmon json
[2026-04-21 11:29:56] 2026-04-21 15:29:22,854 | INFO     | extracted standard memory fields from prmon json
[2026-04-21 11:29:56] 2026-04-21 15:29:22,854 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-21 11:29:56] 2026-04-21 15:29:22,854 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-21 11:29:56] 2026-04-21 15:29:22,855 | INFO     | fitting pss+swap vs Time
[2026-04-21 11:29:56] 2026-04-21 15:29:22,856 | INFO     | sum of square deviations: 177275882.0
[2026-04-21 11:29:56] 2026-04-21 15:29:22,856 | INFO     | sum of deviations: -1523143465.0
[2026-04-21 11:29:56] 2026-04-21 15:29:22,856 | INFO     | mean x (centered): 0.0
[2026-04-21 11:29:56] 2026-04-21 15:29:22,856 | INFO     | mean y: 2614185.3975903615
[2026-04-21 11:29:56] 2026-04-21 15:29:22,856 | INFO     | intersect: 2614185.3975903615
[2026-04-21 11:29:56] 2026-04-21 15:29:22,856 | INFO     | chi2: 0.0562776454718022
[2026-04-21 11:29:56] 2026-04-21 15:29:22,856 | INFO     | current memory leak: -8.59 B/s (using 83 data points, chi2=0.06)
[2026-04-21 11:29:56] 2026-04-21 15:29:22,856 | INFO     | could have reported an average CPU frequency of 3771 MHz (7 samples)
[2026-04-21 11:29:56] 2026-04-21 15:29:22,856 | INFO     | ..............................
[2026-04-21 11:29:56] 2026-04-21 15:29:22,856 | INFO     | . Timing measurements:
[2026-04-21 11:29:56] 2026-04-21 15:29:22,856 | INFO     | . get job = 0 s
[2026-04-21 11:29:56] 2026-04-21 15:29:22,856 | INFO     | . initial setup = 5 s
[2026-04-21 11:29:56] 2026-04-21 15:29:22,857 | INFO     | . payload setup = 7 s
[2026-04-21 11:29:56] 2026-04-21 15:29:22,857 | INFO     | . stage-in = 0 s
[2026-04-21 11:29:56] 2026-04-21 15:29:22,857 | INFO     | . payload execution = 5488 s
[2026-04-21 11:29:56] 2026-04-21 15:29:22,857 | INFO     | . stage-out = 0 s
[2026-04-21 11:29:56] 2026-04-21 15:29:22,857 | INFO     | . log creation = 0 s
[2026-04-21 11:29:56] 2026-04-21 15:29:22,857 | INFO     | ..............................
[2026-04-21 11:29:56] 2026-04-21 15:29:23,255 | INFO     | 
[2026-04-21 11:29:56] 2026-04-21 15:29:23,256 | INFO     | job summary report
[2026-04-21 11:29:56] 2026-04-21 15:29:23,256 | INFO     | --------------------------------------------------
[2026-04-21 11:29:56] 2026-04-21 15:29:23,256 | INFO     | PanDA job id: 7105149939
[2026-04-21 11:29:56] 2026-04-21 15:29:23,256 | INFO     | task id: 49820375
[2026-04-21 11:29:56] 2026-04-21 15:29:23,256 | INFO     | errors: (none)
[2026-04-21 11:29:56] 2026-04-21 15:29:23,256 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-21 11:29:56] 2026-04-21 15:29:23,256 | INFO     | pilot state: finished 
[2026-04-21 11:29:56] 2026-04-21 15:29:23,256 | INFO     | transexitcode: 0
[2026-04-21 11:29:56] 2026-04-21 15:29:23,256 | INFO     | exeerrorcode: 0
[2026-04-21 11:29:56] 2026-04-21 15:29:23,256 | INFO     | exeerrordiag: 
[2026-04-21 11:29:56] 2026-04-21 15:29:23,256 | INFO     | exitcode: 0
[2026-04-21 11:29:56] 2026-04-21 15:29:23,256 | INFO     | exitmsg: OK
[2026-04-21 11:29:56] 2026-04-21 15:29:23,256 | INFO     | cpuconsumptiontime: 39706 s
[2026-04-21 11:29:56] 2026-04-21 15:29:23,256 | INFO     | nevents: 400
[2026-04-21 11:29:56] 2026-04-21 15:29:23,256 | INFO     | neventsw: 0
[2026-04-21 11:29:56] 2026-04-21 15:29:23,256 | INFO     | pid: 1188598
[2026-04-21 11:29:56] 2026-04-21 15:29:23,257 | INFO     | pgrp: 1188598
[2026-04-21 11:29:56] 2026-04-21 15:29:23,257 | INFO     | corecount: 8
[2026-04-21 11:29:56] 2026-04-21 15:29:23,257 | INFO     | event service: False
[2026-04-21 11:29:56] 2026-04-21 15:29:23,257 | INFO     | sizes: {0: 2278292, 1: 2280177, 11: 2280177, 5499: 2306905, 5501: 2316097}
[2026-04-21 11:29:56] 2026-04-21 15:29:23,257 | INFO     | --------------------------------------------------
[2026-04-21 11:29:56] 2026-04-21 15:29:23,257 | INFO     | 
[2026-04-21 11:29:56] 2026-04-21 15:29:23,257 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-21 11:29:56] 2026-04-21 15:29:23,274 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-21 11:29:56] 2026-04-21 15:29:23,274 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-21 11:29:56] 2026-04-21 15:29:23,274 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-21 11:29:56] 2026-04-21 15:29:23,274 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-21 11:29:56] 2026-04-21 15:29:23,274 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-21 11:29:56] 2026-04-21 15:29:23,274 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-21 11:29:56] 2026-04-21 15:29:23,274 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-21 11:29:56] 2026-04-21 15:29:23,274 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-21 11:29:56] 2026-04-21 15:29:23,274 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-21 11:29:56] 2026-04-21 15:29:23,274 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-21 11:29:56] 2026-04-21 15:29:23,275 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-21 11:29:56] 2026-04-21 15:29:23,275 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-21 11:29:56] 2026-04-21 15:29:23,275 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-21 11:29:56] 2026-04-21 15:29:23,275 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-21 11:29:56] 2026-04-21 15:29:23,275 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-21 11:29:56] 2026-04-21 15:29:23,275 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-21 11:29:56] 2026-04-21 15:29:23,275 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-21 11:29:56] 2026-04-21 15:29:23,275 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-21 11:29:56] 2026-04-21 15:29:23,275 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-21 11:29:56] 2026-04-21 15:29:23,276 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-21 11:29:56] 2026-04-21 15:29:23,276 | INFO     | job 7105149939 has completed (purged errors)
[2026-04-21 11:29:56] 2026-04-21 15:29:23,276 | INFO     | overall cleanup function is called
[2026-04-21 11:29:56] 2026-04-21 15:29:23,295 | WARNING  | process 1188598 can no longer be monitored (due to stat problems) - aborting
[2026-04-21 11:29:56] 2026-04-21 15:29:23,582 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 11:29:56] 2026-04-21 15:29:23,583 | INFO     | reaping zombies for max 20 seconds
[2026-04-21 11:29:56] 2026-04-21 15:29:23,599 | INFO     | checking for looping job (in state=finished)
[2026-04-21 11:29:56] 2026-04-21 15:29:23,599 | INFO     | using looping job limit: 7200 s
[2026-04-21 11:29:56] 2026-04-21 15:29:23,999 | INFO     | number of running child processes to parent process 1188598: 1
[2026-04-21 11:29:56] 2026-04-21 15:29:24,000 | INFO     | maximum number of monitored processes: 6
[2026-04-21 11:29:56] 2026-04-21 15:29:24,000 | INFO     | aborting job monitoring since job object (job id=7105149939) has expired
[2026-04-21 11:29:56] 2026-04-21 15:29:24,283 | INFO     | --- collectZombieJob: --- 10, [1188598]
[2026-04-21 11:29:56] 2026-04-21 15:29:24,284 | INFO     | zombie collector waiting for pid 1188598
[2026-04-21 11:29:56] 2026-04-21 15:29:24,284 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-21 11:29:56] 2026-04-21 15:29:24,284 | INFO     | collected zombie processes
[2026-04-21 11:29:56] 2026-04-21 15:29:24,284 | INFO     | will attempt to kill all subprocesses of pid=1188598
[2026-04-21 11:29:56] 2026-04-21 15:29:24,649 | INFO     | process IDs to be killed: [1188598] (in reverse order)
[2026-04-21 11:29:56] 2026-04-21 15:29:24,803 | WARNING  | found no corresponding commands to process id(s)
[2026-04-21 11:29:56] 2026-04-21 15:29:24,803 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-21 11:29:56] 2026-04-21 15:29:24,822 | INFO     | did not find any defunct processes belonging to 1188598
[2026-04-21 11:29:56] 2026-04-21 15:29:24,842 | INFO     | did not find any defunct processes belonging to 1188598
[2026-04-21 11:29:56] 2026-04-21 15:29:24,843 | INFO     | Ready for new job
[2026-04-21 11:29:56] 2026-04-21 15:29:24,844 | INFO     | **************************************
[2026-04-21 11:29:56] 2026-04-21 15:29:24,844 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-21 11:29:56] 2026-04-21 15:29:24,844 | INFO     | **************************************
[2026-04-21 11:29:56] 2026-04-21 15:29:24,844 | INFO     | 
[2026-04-21 11:29:56] 2026-04-21 15:29:24,849 | INFO     | architecture information:
[2026-04-21 11:29:56] 2026-04-21 15:29:24,849 | INFO     | executing command: cat /etc/os-release
[2026-04-21 11:29:56] 2026-04-21 15:29:24,865 | INFO     | cat /etc/os-release:
[2026-04-21 11:29:56] NAME="CentOS Linux"
[2026-04-21 11:29:56] VERSION="7 (Core)"
[2026-04-21 11:29:56] ID="centos"
[2026-04-21 11:29:56] ID_LIKE="rhel fedora"
[2026-04-21 11:29:56] VERSION_ID="7"
[2026-04-21 11:29:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-21 11:29:56] ANSI_COLOR="0;31"
[2026-04-21 11:29:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-21 11:29:56] HOME_URL="https://www.centos.org/"
[2026-04-21 11:29:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-21 11:29:56] 
[2026-04-21 11:29:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-21 11:29:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-21 11:29:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-21 11:29:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-21 11:29:56] 
[2026-04-21 11:29:56] 2026-04-21 15:29:24,865 | INFO     | **************************************
[2026-04-21 11:29:56] 2026-04-21 15:29:25,370 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-21 11:29:56] 2026-04-21 15:29:25,385 | INFO     | sufficient remaining disk space (72468135936 B)
[2026-04-21 11:29:56] 2026-04-21 15:29:25,385 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-21 11:29:56] 2026-04-21 15:29:25,385 | INFO     | current server update state: UPDATING_FINAL
[2026-04-21 11:29:56] 2026-04-21 15:29:25,386 | INFO     | update_server=False
[2026-04-21 11:29:56] 2026-04-21 15:29:25,386 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-21 11:29:56] 2026-04-21 15:29:25,386 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-21 11:29:56] 2026-04-21 15:29:25,386 | INFO     | aborting loop
[2026-04-21 11:29:56] 2026-04-21 15:29:25,386 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-21 11:29:56] 2026-04-21 15:29:25,758 | INFO     | all job control threads have been joined
[2026-04-21 11:29:56] 2026-04-21 15:29:25,943 | INFO     | all data control threads have been joined
[2026-04-21 11:29:56] 2026-04-21 15:29:26,149 | INFO     | all payload control threads have been joined
[2026-04-21 11:29:56] 2026-04-21 15:29:26,387 | INFO     | [job] retrieve thread has finished
[2026-04-21 11:29:56] 2026-04-21 15:29:26,387 | INFO     | [job] job monitor thread has finished
[2026-04-21 11:29:56] 2026-04-21 15:29:26,581 | INFO     | [payload] execute_payloads thread has finished
[2026-04-21 11:29:56] 2026-04-21 15:29:26,699 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-21 11:29:56] 2026-04-21 15:29:26,764 | INFO     | [job] control thread has finished
[2026-04-21 11:29:56] 2026-04-21 15:29:26,929 | INFO     | [payload] validate_post thread has finished
[2026-04-21 11:29:56] 2026-04-21 15:29:26,949 | INFO     | [data] control thread has finished
[2026-04-21 11:29:56] 2026-04-21 15:29:27,154 | INFO     | [payload] control thread has finished
[2026-04-21 11:29:56] 2026-04-21 15:29:27,341 | INFO     | [job] validate thread has finished
[2026-04-21 11:29:56] 2026-04-21 15:29:27,392 | INFO     | [data] copytool_out thread has finished
[2026-04-21 11:29:56] 2026-04-21 15:29:27,449 | INFO     | [data] copytool_in thread has finished
[2026-04-21 11:29:56] 2026-04-21 15:29:27,524 | INFO     | [payload] failed_post thread has finished
[2026-04-21 11:29:56] 2026-04-21 15:29:27,649 | INFO     | [payload] validate_pre thread has finished
[2026-04-21 11:29:56] 2026-04-21 15:29:27,649 | INFO     | [job] create_data_payload thread has finished
[2026-04-21 11:29:56] 2026-04-21 15:29:27,917 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-21 11:29:56] 2026-04-21 15:29:28,337 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-21 11:29:56] 2026-04-21 15:29:28,922 | INFO     | [job] queue monitor thread has finished
[2026-04-21 11:29:56] 2026-04-21 15:29:32,343 | INFO     | [data] queue_monitor thread has finished
[2026-04-21 11:29:56] 2026-04-21 15:29:39,655 | INFO     | [monitor] cgroup control has ended
[2026-04-21 11:29:56] 2026-04-21 15:29:40,562 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140072973735744)>', '<ExcThread(monitor, started 140072615659264)>']
[2026-04-21 11:29:56] 2026-04-21 15:29:45,587 | INFO     | all workflow threads have been joined
[2026-04-21 11:29:56] 2026-04-21 15:29:45,588 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-21 11:29:56] 2026-04-21 15:29:45,588 | INFO     | traces error code: 0
[2026-04-21 11:29:56] 2026-04-21 15:29:45,588 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-21 11:29:56] 2026-04-21 15:29:56,549 | INFO     | PID=1182210 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-21 11:29:56] 2026-04-21 15:29:56,550 | INFO     | .. there are 37 such processes running
[2026-04-21 11:29:56] 2026-04-21 15:29:56,550 | INFO     | found 0 job(s) in 20 queues
[2026-04-21 11:29:56] 2026-04-21 15:29:56,550 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-21 11:29:56] 2026-04-21 15:29:56,550 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-21 11:29:56] 2026-04-21 15:29:56,550 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-21 11:29:56] 2026-04-21 15:29:56,550 | INFO     | [monitor] control thread has ended
[2026-04-21 11:29:56] 2026-04-21 15:29:56,688 [wrapper] ==== pilot stdout END ====
[2026-04-21 11:29:56] 2026-04-21 15:29:56,691 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-21 11:29:56] 2026-04-21 15:29:56,694 [wrapper] pilotpid: 1182210
[2026-04-21 11:29:56] 2026-04-21 15:29:56,696 [wrapper] Pilot exit status: 0
[2026-04-21 11:29:56] 2026-04-21 15:29:56,707 [wrapper] pandaids: 7105149939
[2026-04-21 11:29:56] 2026-04-21 15:29:56,820 [wrapper] cleanup supervisor_pilot 2074096 1182212
[2026-04-21 11:29:56] 2026-04-21 15:29:56,823 [wrapper] Test setup, not cleaning
[2026-04-21 11:29:56] 2026-04-21 15:29:56,826 [wrapper] apfmon messages muted
[2026-04-21 11:29:56] 2026-04-21 15:29:56,829 [wrapper] ==== wrapper stdout END ====
[2026-04-21 11:29:56] 2026-04-21 15:29:56,831 [wrapper] ==== wrapper stderr END ====
[2026-04-21 11:29:56]  *** Error codes and diagnostics ***
[2026-04-21 11:29:56]     "exeErrorCode": 0,
[2026-04-21 11:29:56]     "pilotErrorCode": 0,
[2026-04-21 11:29:56]  *** Listing of results directory ***
[2026-04-21 11:29:56] total 2440840
[2026-04-21 11:29:56] -rwx------. 1 boincer umatlas      36322 Apr 21 03:50 runpilot2-wrapper.sh
[2026-04-21 11:29:56] -rw-r--r--. 1 boincer umatlas     644190 Apr 21 05:10 pilot3.tar.gz
[2026-04-21 11:29:56] -rw-r--r--. 1 boincer umatlas       5094 Apr 21 05:22 queuedata.json
[2026-04-21 11:29:56] -rw-r--r--. 1 boincer umatlas        100 Apr 21 09:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-21 11:29:56] -rwxr-xr-x. 1 boincer umatlas       7986 Apr 21 09:57 run_atlas
[2026-04-21 11:29:56] -rw-r--r--. 1 boincer umatlas        105 Apr 21 09:57 job.xml
[2026-04-21 11:29:56] -rw-r--r--. 2 boincer umatlas 2222467795 Apr 21 09:57 EVNT.49820373._000041.pool.root.1
[2026-04-21 11:29:56] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 09:57 start_atlas.sh
[2026-04-21 11:29:56] drwxrwx--x. 2 boincer umatlas       4096 Apr 21 09:57 shared
[2026-04-21 11:29:56] -rw-r--r--. 2 boincer umatlas     656936 Apr 21 09:57 input.tar.gz
[2026-04-21 11:29:56] -rw-r--r--. 1 boincer umatlas          0 Apr 21 09:57 boinc_lockfile
[2026-04-21 11:29:56] -rw-r--r--. 1 boincer umatlas       2586 Apr 21 09:57 pandaJob.out
[2026-04-21 11:29:56] -rw-------. 1 boincer umatlas         57 Apr 21 09:57 setup.sh.local
[2026-04-21 11:29:56] -rw-------. 1 boincer umatlas     994521 Apr 21 09:57 agis_schedconf.cvmfs.json
[2026-04-21 11:29:56] -rw-------. 1 boincer umatlas    1510145 Apr 21 09:57 agis_ddmendpoints.agis.ALL.json
[2026-04-21 11:29:56] -rw-------. 1 boincer umatlas        431 Apr 21 09:57 workernode_map.json
[2026-04-21 11:29:56] drwx------. 5 boincer umatlas       4096 Apr 21 09:57 pilot3
[2026-04-21 11:29:56] -rw-r--r--. 1 boincer umatlas       7097 Apr 21 11:21 init_data.xml
[2026-04-21 11:29:56] -rw-------. 1 boincer umatlas  271140097 Apr 21 11:28 HITS.49820375._010211.pool.root.1
[2026-04-21 11:29:56] -rw-------. 1 boincer umatlas         95 Apr 21 11:28 pilot_heartbeat.json
[2026-04-21 11:29:56] -rw-r--r--. 1 boincer umatlas        488 Apr 21 11:28 boinc_task_state.xml
[2026-04-21 11:29:56] -rw-------. 1 boincer umatlas       1039 Apr 21 11:29 memory_monitor_summary.json
[2026-04-21 11:29:56] -rw-------. 1 boincer umatlas     343547 Apr 21 11:29 log.49820375._010211.job.log.tgz.1
[2026-04-21 11:29:56] -rw-------. 1 boincer umatlas       6346 Apr 21 11:29 heartbeat_new.json
[2026-04-21 11:29:56] -rw-------. 1 boincer umatlas       6237 Apr 21 11:29 heartbeat.json
[2026-04-21 11:29:56] -rw-r--r--. 1 boincer umatlas       8192 Apr 21 11:29 boinc_mmap_file
[2026-04-21 11:29:56] -rw-r--r--. 1 boincer umatlas         27 Apr 21 11:29 wrapper_checkpoint.txt
[2026-04-21 11:29:56] -rw-------. 1 boincer umatlas        823 Apr 21 11:29 pilotlog.txt
[2026-04-21 11:29:56] -rw-------. 1 boincer umatlas     536081 Apr 21 11:29 log.49820375._010211.job.log.1
[2026-04-21 11:29:56] -rw-------. 1 boincer umatlas        357 Apr 21 11:29 output.list
[2026-04-21 11:29:56] -rw-r--r--. 1 boincer umatlas        410 Apr 21 11:29 runtime_log
[2026-04-21 11:29:56] -rw-------. 1 boincer umatlas     901120 Apr 21 11:29 result.tar.gz
[2026-04-21 11:29:56] -rw-r--r--. 1 boincer umatlas       8958 Apr 21 11:29 runtime_log.err
[2026-04-21 11:29:56] -rw-------. 1 boincer umatlas        653 Apr 21 11:29 2c319c0f95e4.diag
[2026-04-21 11:29:56] -rw-r--r--. 1 boincer umatlas      21227 Apr 21 11:29 stderr.txt
[2026-04-21 11:29:56] HITS file was successfully produced:
[2026-04-21 11:29:56] -rw-------. 1 boincer umatlas 271140097 Apr 21 11:28 shared/HITS.pool.root.1
[2026-04-21 11:29:56]  *** Contents of shared directory: ***
[2026-04-21 11:29:56] total 2436716
[2026-04-21 11:29:56] -rw-r--r--. 2 boincer umatlas 2222467795 Apr 21 09:57 ATLAS.root_0
[2026-04-21 11:29:56] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 09:57 start_atlas.sh
[2026-04-21 11:29:56] -rw-r--r--. 2 boincer umatlas     656936 Apr 21 09:57 input.tar.gz
[2026-04-21 11:29:56] -rw-------. 1 boincer umatlas  271140097 Apr 21 11:28 HITS.pool.root.1
[2026-04-21 11:29:56] -rw-------. 1 boincer umatlas     901120 Apr 21 11:29 result.tar.gz
11:29:58 (1177943): run_atlas exited; CPU time 39791.125407
11:29:58 (1177943): called boinc_finish(0)

</stderr_txt>
]]>

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