Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:35:22 (178180): wrapper (7.7.26015): starting
08:35:22 (178180): wrapper: running run_atlas (--nthreads 12)
[2026-04-21 08:35:22] Arguments: --nthreads 12
[2026-04-21 08:35:22] Threads: 12
[2026-04-21 08:35:22] Checking for CVMFS
[2026-04-21 08:35:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-21 08:35:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-21 08:35:23] Running cvmfs_config stat atlas.cern.ch
[2026-04-21 08:35:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-21 08:35:24] 2.13.3.0 14106 240248 264736 158690 3 257 39607258 40960001 31973 16776704 0 3106490223 99.784 1886141583 43410 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-21 08:35:24] CVMFS is ok
[2026-04-21 08:35:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 08:35:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 08:35:24] Further information can be found at the LHC@home message board.
[2026-04-21 08:35:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 08:35:24] Checking for apptainer binary...
[2026-04-21 08:35:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-21 08:35:24] Running /usr/bin/apptainer --version
[2026-04-21 08:35:25] apptainer version 1.4.5-2.el9
[2026-04-21 08:35:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 08:35:26] c8-7-5.aglt2.org
[2026-04-21 08:35:26] apptainer works
[2026-04-21 08:35:26] Set ATHENA_PROC_NUMBER=12
[2026-04-21 08:35:26] Set ATHENA_CORE_NUMBER=12
[2026-04-21 08:35:27] Starting ATLAS job with PandaID=7105310057
[2026-04-21 08:35:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-21 10:19:28]  *** The last 200 lines of the pilot log: ***
[2026-04-21 10:19:28]  guid=6f67961f-b039-4c21-b237-2846fef1c9e6
[2026-04-21 10:19:28]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-21 10:19:28]  is_altstaged=None
[2026-04-21 10:19:28]  is_tar=False
[2026-04-21 10:19:28]  lfn=log.49820244._014017.job.log.tgz.1
[2026-04-21 10:19:28]  mtime=0
[2026-04-21 10:19:28]  protocol_id=None
[2026-04-21 10:19:28]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-21 10:19:28]  replicas=None
[2026-04-21 10:19:28]  scope=mc23_13p6TeV
[2026-04-21 10:19:28]  status=None
[2026-04-21 10:19:28]  status_code=0
[2026-04-21 10:19:28]  storage_token=
[2026-04-21 10:19:28]  surl=/tmp/boinchome/slots/4/PanDA_Pilot-7105310057/log.49820244._014017.job.log.tgz.1
[2026-04-21 10:19:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cf/66/log.49820244._014017.job.log.tgz.1
[2026-04-21 10:19:28]  workdir=None
[2026-04-21 10:19:28] ]
[2026-04-21 10:19:28] 2026-04-21 14:18:51,578 | INFO     | transferring file log.49820244._014017.job.log.tgz.1 from /tmp/boinchome/slots/4/PanDA_Pilot-7105310057/log.49820244._014017.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-04-21 10:19:28] 2026-04-21 14:18:51,578 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/4/PanDA_Pilot-7105310057/log.49820244._014017.job.log.tgz.1 /tmp/boinchome/slots/4/log.49820244._014017.job
[2026-04-21 10:19:28] 2026-04-21 14:18:51,595 | INFO     | adding to output.list: log.49820244._014017.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cf/66/log.49820244._014017.job.log.tg
[2026-04-21 10:19:28] 2026-04-21 14:18:51,596 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-21 10:19:28] 2026-04-21 14:18:51,596 | INFO     | summary of transferred files:
[2026-04-21 10:19:28] 2026-04-21 14:18:51,596 | INFO     |  -- lfn=log.49820244._014017.job.log.tgz.1, status_code=0, status=transferred
[2026-04-21 10:19:28] 2026-04-21 14:18:51,596 | INFO     | stage-out finished correctly
[2026-04-21 10:19:28] 2026-04-21 14:18:54,050 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-21 10:19:28] 2026-04-21 14:18:54,237 | INFO     | job 7105310057 has state=finished
[2026-04-21 10:19:28] 2026-04-21 14:18:54,240 | INFO     | preparing for final server update for job 7105310057 in state='finished'
[2026-04-21 10:19:28] 2026-04-21 14:18:54,374 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-04-21 10:19:28] 2026-04-21 14:18:54,374 | INFO     | reading metadata from: /tmp/boinchome/slots/4/PanDA_Pilot-7105310057/jobReport.json
[2026-04-21 10:19:28] 2026-04-21 14:18:54,379 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/4/workernode_map.json
[2026-04-21 10:19:28] 2026-04-21 14:18:54,380 | INFO     | this job has now completed (state=finished)
[2026-04-21 10:19:28] 2026-04-21 14:18:54,380 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-21 10:19:28] 2026-04-21 14:18:54,380 | INFO     | log transfer has been attempted: DONE
[2026-04-21 10:19:28] 2026-04-21 14:18:54,380 | INFO     | job 7105310057 has finished - writing final server update
[2026-04-21 10:19:28] 2026-04-21 14:18:54,380 | INFO     | total number of processed events: 400 (read)
[2026-04-21 10:19:28] 2026-04-21 14:18:54,409 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-7105310057/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 10:19:28] 2026-04-21 14:18:54,410 | INFO     | extracted standard info from prmon json
[2026-04-21 10:19:28] 2026-04-21 14:18:54,410 | INFO     | extracted standard memory fields from prmon json
[2026-04-21 10:19:28] 2026-04-21 14:18:54,410 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-21 10:19:28] 2026-04-21 14:18:54,410 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-21 10:19:28] 2026-04-21 14:18:54,411 | INFO     | fitting pss+swap vs Time
[2026-04-21 10:19:28] 2026-04-21 14:18:54,412 | INFO     | sum of square deviations: 241429643.0
[2026-04-21 10:19:28] 2026-04-21 14:18:54,412 | INFO     | sum of deviations: 3547153934.5
[2026-04-21 10:19:28] 2026-04-21 14:18:54,412 | INFO     | mean x (centered): 0.0
[2026-04-21 10:19:28] 2026-04-21 14:18:54,412 | INFO     | mean y: 2757507.25
[2026-04-21 10:19:28] 2026-04-21 14:18:54,412 | INFO     | intersect: 2757507.25
[2026-04-21 10:19:28] 2026-04-21 14:18:54,412 | INFO     | chi2: 0.12928077672005064
[2026-04-21 10:19:28] 2026-04-21 14:18:54,412 | INFO     | current memory leak: 14.69 B/s (using 92 data points, chi2=0.13)
[2026-04-21 10:19:28] 2026-04-21 14:18:54,413 | INFO     | could have reported an average CPU frequency of 3798 MHz (7 samples)
[2026-04-21 10:19:28] 2026-04-21 14:18:54,413 | INFO     | ..............................
[2026-04-21 10:19:28] 2026-04-21 14:18:54,413 | INFO     | . Timing measurements:
[2026-04-21 10:19:28] 2026-04-21 14:18:54,413 | INFO     | . get job = 0 s
[2026-04-21 10:19:28] 2026-04-21 14:18:54,413 | INFO     | . initial setup = 25 s
[2026-04-21 10:19:28] 2026-04-21 14:18:54,413 | INFO     | . payload setup = 47 s
[2026-04-21 10:19:28] 2026-04-21 14:18:54,413 | INFO     | . stage-in = 0 s
[2026-04-21 10:19:28] 2026-04-21 14:18:54,413 | INFO     | . payload execution = 6053 s
[2026-04-21 10:19:28] 2026-04-21 14:18:54,413 | INFO     | . stage-out = 0 s
[2026-04-21 10:19:28] 2026-04-21 14:18:54,413 | INFO     | . log creation = 0 s
[2026-04-21 10:19:28] 2026-04-21 14:18:54,413 | INFO     | ..............................
[2026-04-21 10:19:28] 2026-04-21 14:18:54,602 | INFO     | 
[2026-04-21 10:19:28] 2026-04-21 14:18:54,602 | INFO     | job summary report
[2026-04-21 10:19:28] 2026-04-21 14:18:54,602 | INFO     | --------------------------------------------------
[2026-04-21 10:19:28] 2026-04-21 14:18:54,602 | INFO     | PanDA job id: 7105310057
[2026-04-21 10:19:28] 2026-04-21 14:18:54,602 | INFO     | task id: 49820244
[2026-04-21 10:19:28] 2026-04-21 14:18:54,602 | INFO     | errors: (none)
[2026-04-21 10:19:28] 2026-04-21 14:18:54,603 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-21 10:19:28] 2026-04-21 14:18:54,603 | INFO     | pilot state: finished 
[2026-04-21 10:19:28] 2026-04-21 14:18:54,603 | INFO     | transexitcode: 0
[2026-04-21 10:19:28] 2026-04-21 14:18:54,603 | INFO     | exeerrorcode: 0
[2026-04-21 10:19:28] 2026-04-21 14:18:54,603 | INFO     | exeerrordiag: 
[2026-04-21 10:19:28] 2026-04-21 14:18:54,603 | INFO     | exitcode: 0
[2026-04-21 10:19:28] 2026-04-21 14:18:54,603 | INFO     | exitmsg: OK
[2026-04-21 10:19:28] 2026-04-21 14:18:54,603 | INFO     | cpuconsumptiontime: 42204 s
[2026-04-21 10:19:28] 2026-04-21 14:18:54,603 | INFO     | nevents: 400
[2026-04-21 10:19:28] 2026-04-21 14:18:54,603 | INFO     | neventsw: 0
[2026-04-21 10:19:28] 2026-04-21 14:18:54,603 | INFO     | pid: 235287
[2026-04-21 10:19:28] 2026-04-21 14:18:54,603 | INFO     | pgrp: 235287
[2026-04-21 10:19:28] 2026-04-21 14:18:54,603 | INFO     | corecount: 12
[2026-04-21 10:19:28] 2026-04-21 14:18:54,604 | INFO     | event service: False
[2026-04-21 10:19:28] 2026-04-21 14:18:54,604 | INFO     | sizes: {0: 2281556, 1: 2281811, 2: 2283413, 12: 2283413, 6105: 2310249, 6106: 2319247, 6108: 2319431, 6109: 2319625}
[2026-04-21 10:19:28] 2026-04-21 14:18:54,604 | INFO     | --------------------------------------------------
[2026-04-21 10:19:28] 2026-04-21 14:18:54,604 | INFO     | 
[2026-04-21 10:19:28] 2026-04-21 14:18:54,604 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-04-21 10:19:28] 2026-04-21 14:18:54,653 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-21 10:19:28] 2026-04-21 14:18:54,685 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-21 10:19:28] 2026-04-21 14:18:54,685 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-21 10:19:28] 2026-04-21 14:18:54,685 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-21 10:19:28] 2026-04-21 14:18:54,685 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-21 10:19:28] 2026-04-21 14:18:54,685 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-21 10:19:28] 2026-04-21 14:18:54,685 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-21 10:19:28] 2026-04-21 14:18:54,685 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-21 10:19:28] 2026-04-21 14:18:54,685 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-21 10:19:28] 2026-04-21 14:18:54,685 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-21 10:19:28] 2026-04-21 14:18:54,685 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-21 10:19:28] 2026-04-21 14:18:54,685 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-21 10:19:28] 2026-04-21 14:18:54,685 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-21 10:19:28] 2026-04-21 14:18:54,685 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-21 10:19:28] 2026-04-21 14:18:54,685 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-21 10:19:28] 2026-04-21 14:18:54,685 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-21 10:19:28] 2026-04-21 14:18:54,685 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-21 10:19:28] 2026-04-21 14:18:54,686 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-21 10:19:28] 2026-04-21 14:18:54,686 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-21 10:19:28] 2026-04-21 14:18:54,686 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-21 10:19:28] 2026-04-21 14:18:54,686 | INFO     | job 7105310057 has completed (purged errors)
[2026-04-21 10:19:28] 2026-04-21 14:18:54,686 | INFO     | overall cleanup function is called
[2026-04-21 10:19:28] 2026-04-21 14:18:54,947 | INFO     | PID=202686 has CPU usage=10.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-21 10:19:28] 2026-04-21 14:18:54,947 | INFO     | .. there are 38 such processes running
[2026-04-21 10:19:28] 2026-04-21 14:18:55,551 | WARNING  | process 235287 can no longer be monitored (due to stat problems) - aborting
[2026-04-21 10:19:28] 2026-04-21 14:18:55,712 | INFO     | --- collectZombieJob: --- 10, [235287]
[2026-04-21 10:19:28] 2026-04-21 14:18:55,712 | INFO     | zombie collector waiting for pid 235287
[2026-04-21 10:19:28] 2026-04-21 14:18:55,712 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-21 10:19:28] 2026-04-21 14:18:55,712 | INFO     | collected zombie processes
[2026-04-21 10:19:28] 2026-04-21 14:18:55,712 | INFO     | will attempt to kill all subprocesses of pid=235287
[2026-04-21 10:19:28] 2026-04-21 14:18:56,084 | INFO     | using path: /tmp/boinchome/slots/4/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 10:19:28] 2026-04-21 14:18:56,651 | INFO     | process IDs to be killed: [235287] (in reverse order)
[2026-04-21 10:19:28] 2026-04-21 14:18:56,874 | WARNING  | found no corresponding commands to process id(s)
[2026-04-21 10:19:28] 2026-04-21 14:18:56,875 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-21 10:19:28] 2026-04-21 14:18:56,893 | INFO     | number of running child processes to parent process 235287: 1
[2026-04-21 10:19:28] 2026-04-21 14:18:56,893 | INFO     | maximum number of monitored processes: 6
[2026-04-21 10:19:28] 2026-04-21 14:18:56,893 | INFO     | aborting job monitoring since job object (job id=7105310057) has expired
[2026-04-21 10:19:28] 2026-04-21 14:18:56,916 | INFO     | did not find any defunct processes belonging to 235287
[2026-04-21 10:19:28] 2026-04-21 14:18:56,943 | INFO     | did not find any defunct processes belonging to 235287
[2026-04-21 10:19:28] 2026-04-21 14:18:56,944 | INFO     | Ready for new job
[2026-04-21 10:19:28] 2026-04-21 14:18:56,945 | INFO     | **************************************
[2026-04-21 10:19:28] 2026-04-21 14:18:56,945 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-21 10:19:28] 2026-04-21 14:18:56,945 | INFO     | **************************************
[2026-04-21 10:19:28] 2026-04-21 14:18:56,945 | INFO     | 
[2026-04-21 10:19:28] 2026-04-21 14:18:56,950 | INFO     | architecture information:
[2026-04-21 10:19:28] 2026-04-21 14:18:56,951 | INFO     | executing command: cat /etc/os-release
[2026-04-21 10:19:28] 2026-04-21 14:18:56,981 | INFO     | cat /etc/os-release:
[2026-04-21 10:19:28] NAME="CentOS Linux"
[2026-04-21 10:19:28] VERSION="7 (Core)"
[2026-04-21 10:19:28] ID="centos"
[2026-04-21 10:19:28] ID_LIKE="rhel fedora"
[2026-04-21 10:19:28] VERSION_ID="7"
[2026-04-21 10:19:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-21 10:19:28] ANSI_COLOR="0;31"
[2026-04-21 10:19:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-21 10:19:28] HOME_URL="https://www.centos.org/"
[2026-04-21 10:19:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-21 10:19:28] 
[2026-04-21 10:19:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-21 10:19:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-21 10:19:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-21 10:19:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-21 10:19:28] 
[2026-04-21 10:19:28] 2026-04-21 14:18:56,981 | INFO     | **************************************
[2026-04-21 10:19:28] 2026-04-21 14:18:57,484 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-04-21 10:19:28] 2026-04-21 14:18:57,500 | INFO     | sufficient remaining disk space (159873236992 B)
[2026-04-21 10:19:28] 2026-04-21 14:18:57,501 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-21 10:19:28] 2026-04-21 14:18:57,501 | INFO     | current server update state: UPDATING_FINAL
[2026-04-21 10:19:28] 2026-04-21 14:18:57,501 | INFO     | update_server=False
[2026-04-21 10:19:28] 2026-04-21 14:18:57,501 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-21 10:19:28] 2026-04-21 14:18:57,501 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-21 10:19:28] 2026-04-21 14:18:57,501 | INFO     | will abort loop
[2026-04-21 10:19:28] 2026-04-21 14:18:57,502 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-21 10:19:28] 2026-04-21 14:18:58,451 | INFO     | all data control threads have been joined
[2026-04-21 10:19:28] 2026-04-21 14:18:58,506 | INFO     | [job] retrieve thread has finished
[2026-04-21 10:19:28] 2026-04-21 14:18:58,508 | INFO     | [job] job monitor thread has finished
[2026-04-21 10:19:28] 2026-04-21 14:18:58,621 | INFO     | all payload control threads have been joined
[2026-04-21 10:19:28] 2026-04-21 14:18:58,745 | INFO     | all job control threads have been joined
[2026-04-21 10:19:28] 2026-04-21 14:18:59,094 | INFO     | [job] validate thread has finished
[2026-04-21 10:19:28] 2026-04-21 14:18:59,281 | INFO     | [payload] execute_payloads thread has finished
[2026-04-21 10:19:28] 2026-04-21 14:18:59,290 | INFO     | [payload] failed_post thread has finished
[2026-04-21 10:19:28] 2026-04-21 14:18:59,456 | INFO     | [data] control thread has finished
[2026-04-21 10:19:28] 2026-04-21 14:18:59,487 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-21 10:19:28] 2026-04-21 14:18:59,509 | INFO     | [data] copytool_out thread has finished
[2026-04-21 10:19:28] 2026-04-21 14:18:59,596 | INFO     | [job] create_data_payload thread has finished
[2026-04-21 10:19:28] 2026-04-21 14:18:59,621 | INFO     | [payload] validate_pre thread has finished
[2026-04-21 10:19:28] 2026-04-21 14:18:59,626 | INFO     | [payload] control thread has finished
[2026-04-21 10:19:28] 2026-04-21 14:18:59,628 | INFO     | [data] copytool_in thread has finished
[2026-04-21 10:19:28] 2026-04-21 14:18:59,750 | INFO     | [job] control thread has finished
[2026-04-21 10:19:28] 2026-04-21 14:18:59,811 | INFO     | [payload] validate_post thread has finished
[2026-04-21 10:19:28] 2026-04-21 14:18:59,832 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-21 10:19:28] 2026-04-21 14:19:00,115 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-21 10:19:28] 2026-04-21 14:19:00,493 | INFO     | [job] queue monitor thread has finished
[2026-04-21 10:19:28] 2026-04-21 14:19:03,124 | INFO     | [monitor] cgroup control has ended
[2026-04-21 10:19:28] 2026-04-21 14:19:04,122 | INFO     | [data] queue_monitor thread has finished
[2026-04-21 10:19:28] 2026-04-21 14:19:05,129 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139774726932288)>', '<ExcThread(monitor, started 139773922498304)>']
[2026-04-21 10:19:28] 2026-04-21 14:19:10,154 | INFO     | all workflow threads have been joined
[2026-04-21 10:19:28] 2026-04-21 14:19:10,154 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-21 10:19:28] 2026-04-21 14:19:10,154 | INFO     | traces error code: 0
[2026-04-21 10:19:28] 2026-04-21 14:19:10,154 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-21 10:19:28] 2026-04-21 14:19:27,655 | INFO     | PID=202686 has CPU usage=7.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-21 10:19:28] 2026-04-21 14:19:27,655 | INFO     | .. there are 38 such processes running
[2026-04-21 10:19:28] 2026-04-21 14:19:27,656 | INFO     | found 0 job(s) in 20 queues
[2026-04-21 10:19:28] 2026-04-21 14:19:27,656 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-21 10:19:28] 2026-04-21 14:19:27,656 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-21 10:19:28] 2026-04-21 14:19:27,656 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-21 10:19:28] 2026-04-21 14:19:27,656 | INFO     | [monitor] control thread has ended
[2026-04-21 10:19:28] 2026-04-21 14:19:27,972 [wrapper] ==== pilot stdout END ====
[2026-04-21 10:19:28] 2026-04-21 14:19:27,982 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-21 10:19:28] 2026-04-21 14:19:27,991 [wrapper] pilotpid: 202686
[2026-04-21 10:19:28] 2026-04-21 14:19:28,006 [wrapper] Pilot exit status: 0
[2026-04-21 10:19:28] 2026-04-21 14:19:28,042 [wrapper] pandaids: 7105310057
[2026-04-21 10:19:28] 2026-04-21 14:19:28,192 [wrapper] cleanup supervisor_pilot 1690113 202687
[2026-04-21 10:19:28] 2026-04-21 14:19:28,195 [wrapper] Test setup, not cleaning
[2026-04-21 10:19:28] 2026-04-21 14:19:28,199 [wrapper] apfmon messages muted
[2026-04-21 10:19:28] 2026-04-21 14:19:28,202 [wrapper] ==== wrapper stdout END ====
[2026-04-21 10:19:28] 2026-04-21 14:19:28,205 [wrapper] ==== wrapper stderr END ====
[2026-04-21 10:19:28]  *** Error codes and diagnostics ***
[2026-04-21 10:19:28]     "exeErrorCode": 0,
[2026-04-21 10:19:28]     "pilotErrorCode": 0,
[2026-04-21 10:19:28]  *** Listing of results directory ***
[2026-04-21 10:19:28] total 2490276
[2026-04-21 10:19:28] -rw-r--r--. 1 boincer umatlas     644190 Apr 21 06:54 pilot3.tar.gz
[2026-04-21 10:19:28] -rwx------. 1 boincer umatlas      36322 Apr 21 07:04 runpilot2-wrapper.sh
[2026-04-21 10:19:28] -rw-r--r--. 1 boincer umatlas       5094 Apr 21 07:05 queuedata.json
[2026-04-21 10:19:28] -rw-r--r--. 1 boincer umatlas        100 Apr 21 08:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-21 10:19:28] -rwxr-xr-x. 1 boincer umatlas       7986 Apr 21 08:35 run_atlas
[2026-04-21 10:19:28] -rw-r--r--. 1 boincer umatlas        105 Apr 21 08:35 job.xml
[2026-04-21 10:19:28] -rw-r--r--. 2 boincer umatlas 2264395303 Apr 21 08:35 EVNT.49820242._000040.pool.root.1
[2026-04-21 10:19:28] drwxrwx--x. 2 boincer umatlas       4096 Apr 21 08:35 shared
[2026-04-21 10:19:28] -rw-r--r--. 2 boincer umatlas     656923 Apr 21 08:35 input.tar.gz
[2026-04-21 10:19:28] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 08:35 start_atlas.sh
[2026-04-21 10:19:28] -rw-r--r--. 1 boincer umatlas          0 Apr 21 08:35 boinc_lockfile
[2026-04-21 10:19:28] -rw-r--r--. 1 boincer umatlas       2551 Apr 21 08:35 pandaJob.out
[2026-04-21 10:19:28] -rw-------. 1 boincer umatlas         57 Apr 21 08:35 setup.sh.local
[2026-04-21 10:19:28] -rw-------. 1 boincer umatlas     993801 Apr 21 08:36 agis_schedconf.cvmfs.json
[2026-04-21 10:19:28] -rw-------. 1 boincer umatlas    1512404 Apr 21 08:36 agis_ddmendpoints.agis.ALL.json
[2026-04-21 10:19:28] -rw-------. 1 boincer umatlas        429 Apr 21 08:36 workernode_map.json
[2026-04-21 10:19:28] drwx------. 5 boincer umatlas       4096 Apr 21 08:36 pilot3
[2026-04-21 10:19:28] -rw-------. 1 boincer umatlas  279600922 Apr 21 10:18 HITS.49820244._014017.pool.root.1
[2026-04-21 10:19:28] -rw-r--r--. 1 boincer umatlas        489 Apr 21 10:18 boinc_task_state.xml
[2026-04-21 10:19:28] -rw-r--r--. 1 boincer umatlas       7087 Apr 21 10:18 init_data.xml
[2026-04-21 10:19:28] -rw-------. 1 boincer umatlas       1047 Apr 21 10:18 memory_monitor_summary.json
[2026-04-21 10:19:28] -rw-------. 1 boincer umatlas     424654 Apr 21 10:18 log.49820244._014017.job.log.tgz.1
[2026-04-21 10:19:28] -rw-------. 1 boincer umatlas       6372 Apr 21 10:18 heartbeat_new.json
[2026-04-21 10:19:28] -rw-------. 1 boincer umatlas       6263 Apr 21 10:18 heartbeat.json
[2026-04-21 10:19:28] -rw-r--r--. 1 boincer umatlas       8192 Apr 21 10:19 boinc_mmap_file
[2026-04-21 10:19:28] -rw-r--r--. 1 boincer umatlas         27 Apr 21 10:19 wrapper_checkpoint.txt
[2026-04-21 10:19:28] -rw-------. 1 boincer umatlas        822 Apr 21 10:19 pilotlog.txt
[2026-04-21 10:19:28] -rw-------. 1 boincer umatlas         95 Apr 21 10:19 pilot_heartbeat.json
[2026-04-21 10:19:28] -rw-------. 1 boincer umatlas     569669 Apr 21 10:19 log.49820244._014017.job.log.1
[2026-04-21 10:19:28] -rw-------. 1 boincer umatlas        357 Apr 21 10:19 output.list
[2026-04-21 10:19:28] -rw-r--r--. 1 boincer umatlas        410 Apr 21 10:19 runtime_log
[2026-04-21 10:19:28] -rw-------. 1 boincer umatlas    1013760 Apr 21 10:19 result.tar.gz
[2026-04-21 10:19:28] -rw-r--r--. 1 boincer umatlas       8955 Apr 21 10:19 runtime_log.err
[2026-04-21 10:19:28] -rw-------. 1 boincer umatlas        656 Apr 21 10:19 59be5bc626e5.diag
[2026-04-21 10:19:28] -rw-r--r--. 1 boincer umatlas      21405 Apr 21 10:19 stderr.txt
[2026-04-21 10:19:28] HITS file was successfully produced:
[2026-04-21 10:19:28] -rw-------. 1 boincer umatlas 279600922 Apr 21 10:18 shared/HITS.pool.root.1
[2026-04-21 10:19:28]  *** Contents of shared directory: ***
[2026-04-21 10:19:28] total 2486032
[2026-04-21 10:19:28] -rw-r--r--. 2 boincer umatlas 2264395303 Apr 21 08:35 ATLAS.root_0
[2026-04-21 10:19:28] -rw-r--r--. 2 boincer umatlas     656923 Apr 21 08:35 input.tar.gz
[2026-04-21 10:19:28] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 08:35 start_atlas.sh
[2026-04-21 10:19:28] -rw-------. 1 boincer umatlas  279600922 Apr 21 10:18 HITS.pool.root.1
[2026-04-21 10:19:28] -rw-------. 1 boincer umatlas    1013760 Apr 21 10:19 result.tar.gz
10:19:30 (178180): run_atlas exited; CPU time 42385.764594
10:19:30 (178180): called boinc_finish(0)

</stderr_txt>
]]>

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