Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:33:41 (152715): wrapper (7.7.26015): starting
08:33:41 (152715): wrapper: running run_atlas (--nthreads 12)
[2026-04-21 08:33:42] Arguments: --nthreads 12
[2026-04-21 08:33:42] Threads: 12
[2026-04-21 08:33:42] Checking for CVMFS
[2026-04-21 08:33:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-21 08:33:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-21 08:33:42] Running cvmfs_config stat atlas.cern.ch
[2026-04-21 08:33:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-21 08:33:43] 2.13.3.0 14106 240246 269048 158690 0 256 39607258 40960001 32422 16776704 0 3106333532 99.784 1886141583 43410 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-21 08:33:43] CVMFS is ok
[2026-04-21 08:33:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 08:33:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 08:33:43] Further information can be found at the LHC@home message board.
[2026-04-21 08:33:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 08:33:43] Checking for apptainer binary...
[2026-04-21 08:33:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-21 08:33:43] Running /usr/bin/apptainer --version
[2026-04-21 08:33:43] apptainer version 1.4.5-2.el9
[2026-04-21 08:33:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 08:33:44] c8-7-5.aglt2.org
[2026-04-21 08:33:44] apptainer works
[2026-04-21 08:33:44] Set ATHENA_PROC_NUMBER=12
[2026-04-21 08:33:44] Set ATHENA_CORE_NUMBER=12
[2026-04-21 08:33:45] Starting ATLAS job with PandaID=7105310047
[2026-04-21 08:33:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-21 09:49:30]  *** The last 200 lines of the pilot log: ***
[2026-04-21 09:49:30]  filesize=392097
[2026-04-21 09:49:30]  filetype=log
[2026-04-21 09:49:30]  guid=0555a753-6463-484a-904c-6658588a2422
[2026-04-21 09:49:30]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-21 09:49:30]  is_altstaged=None
[2026-04-21 09:49:30]  is_tar=False
[2026-04-21 09:49:30]  lfn=log.49820244._014007.job.log.tgz.1
[2026-04-21 09:49:30]  mtime=0
[2026-04-21 09:49:30]  protocol_id=None
[2026-04-21 09:49:30]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-21 09:49:30]  replicas=None
[2026-04-21 09:49:30]  scope=mc23_13p6TeV
[2026-04-21 09:49:30]  status=None
[2026-04-21 09:49:30]  status_code=0
[2026-04-21 09:49:30]  storage_token=
[2026-04-21 09:49:30]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-7105310047/log.49820244._014007.job.log.tgz.1
[2026-04-21 09:49:30]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e9/a3/log.49820244._014007.job.log.tgz.1
[2026-04-21 09:49:30]  workdir=None
[2026-04-21 09:49:30] ]
[2026-04-21 09:49:30] 2026-04-21 13:48:53,146 | INFO     | transferring file log.49820244._014007.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-7105310047/log.49820244._014007.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-04-21 09:49:30] 2026-04-21 13:48:53,146 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-7105310047/log.49820244._014007.job.log.tgz.1 /tmp/boinchome/slots/3/log.49820244._014007.job
[2026-04-21 09:49:30] 2026-04-21 13:48:53,175 | INFO     | adding to output.list: log.49820244._014007.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e9/a3/log.49820244._014007.job.log.tg
[2026-04-21 09:49:30] 2026-04-21 13:48:53,176 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-21 09:49:30] 2026-04-21 13:48:53,176 | INFO     | summary of transferred files:
[2026-04-21 09:49:30] 2026-04-21 13:48:53,176 | INFO     |  -- lfn=log.49820244._014007.job.log.tgz.1, status_code=0, status=transferred
[2026-04-21 09:49:30] 2026-04-21 13:48:53,176 | INFO     | stage-out finished correctly
[2026-04-21 09:49:30] 2026-04-21 13:48:55,306 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-21 09:49:30] 2026-04-21 13:48:55,403 | INFO     | job 7105310047 has state=finished
[2026-04-21 09:49:30] 2026-04-21 13:48:55,403 | INFO     | preparing for final server update for job 7105310047 in state='finished'
[2026-04-21 09:49:30] 2026-04-21 13:48:55,403 | INFO     | reading metadata from: /tmp/boinchome/slots/3/PanDA_Pilot-7105310047/jobReport.json
[2026-04-21 09:49:30] 2026-04-21 13:48:55,405 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/3/workernode_map.json
[2026-04-21 09:49:30] 2026-04-21 13:48:55,405 | INFO     | this job has now completed (state=finished)
[2026-04-21 09:49:30] 2026-04-21 13:48:55,405 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-21 09:49:30] 2026-04-21 13:48:55,405 | INFO     | log transfer has been attempted: DONE
[2026-04-21 09:49:30] 2026-04-21 13:48:55,405 | INFO     | job 7105310047 has finished - writing final server update
[2026-04-21 09:49:30] 2026-04-21 13:48:55,405 | INFO     | total number of processed events: 400 (read)
[2026-04-21 09:49:30] 2026-04-21 13:48:55,425 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-7105310047/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 09:49:30] 2026-04-21 13:48:55,426 | INFO     | extracted standard info from prmon json
[2026-04-21 09:49:30] 2026-04-21 13:48:55,426 | INFO     | extracted standard memory fields from prmon json
[2026-04-21 09:49:30] 2026-04-21 13:48:55,426 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-21 09:49:30] 2026-04-21 13:48:55,426 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-21 09:49:30] 2026-04-21 13:48:55,428 | INFO     | fitting pss+swap vs Time
[2026-04-21 09:49:30] 2026-04-21 13:48:55,428 | INFO     | sum of square deviations: 81266463.609375
[2026-04-21 09:49:30] 2026-04-21 13:48:55,428 | INFO     | sum of deviations: 2721617915.6875
[2026-04-21 09:49:30] 2026-04-21 13:48:55,428 | INFO     | mean x (centered): 0.0
[2026-04-21 09:49:30] 2026-04-21 13:48:55,428 | INFO     | mean y: 2742925.0625
[2026-04-21 09:49:30] 2026-04-21 13:48:55,428 | INFO     | intersect: 2742925.0625
[2026-04-21 09:49:30] 2026-04-21 13:48:55,428 | INFO     | chi2: 0.167910974878479
[2026-04-21 09:49:30] 2026-04-21 13:48:55,428 | INFO     | current memory leak: 33.49 B/s (using 64 data points, chi2=0.17)
[2026-04-21 09:49:30] 2026-04-21 13:48:55,428 | INFO     | could have reported an average CPU frequency of 3799 MHz (6 samples)
[2026-04-21 09:49:30] 2026-04-21 13:48:55,428 | INFO     | ..............................
[2026-04-21 09:49:30] 2026-04-21 13:48:55,429 | INFO     | . Timing measurements:
[2026-04-21 09:49:30] 2026-04-21 13:48:55,429 | INFO     | . get job = 0 s
[2026-04-21 09:49:30] 2026-04-21 13:48:55,429 | INFO     | . initial setup = 47 s
[2026-04-21 09:49:30] 2026-04-21 13:48:55,429 | INFO     | . payload setup = 52 s
[2026-04-21 09:49:30] 2026-04-21 13:48:55,429 | INFO     | . stage-in = 0 s
[2026-04-21 09:49:30] 2026-04-21 13:48:55,429 | INFO     | . payload execution = 4297 s
[2026-04-21 09:49:30] 2026-04-21 13:48:55,429 | INFO     | . stage-out = 1 s
[2026-04-21 09:49:30] 2026-04-21 13:48:55,429 | INFO     | . log creation = 0 s
[2026-04-21 09:49:30] 2026-04-21 13:48:55,429 | INFO     | ..............................
[2026-04-21 09:49:30] 2026-04-21 13:48:55,487 | INFO     | 
[2026-04-21 09:49:30] 2026-04-21 13:48:55,487 | INFO     | job summary report
[2026-04-21 09:49:30] 2026-04-21 13:48:55,487 | INFO     | --------------------------------------------------
[2026-04-21 09:49:30] 2026-04-21 13:48:55,488 | INFO     | PanDA job id: 7105310047
[2026-04-21 09:49:30] 2026-04-21 13:48:55,488 | INFO     | task id: 49820244
[2026-04-21 09:49:30] 2026-04-21 13:48:55,488 | INFO     | errors: (none)
[2026-04-21 09:49:30] 2026-04-21 13:48:55,488 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-21 09:49:30] 2026-04-21 13:48:55,488 | INFO     | pilot state: finished 
[2026-04-21 09:49:30] 2026-04-21 13:48:55,488 | INFO     | transexitcode: 0
[2026-04-21 09:49:30] 2026-04-21 13:48:55,488 | INFO     | exeerrorcode: 0
[2026-04-21 09:49:30] 2026-04-21 13:48:55,488 | INFO     | exeerrordiag: 
[2026-04-21 09:49:30] 2026-04-21 13:48:55,488 | INFO     | exitcode: 0
[2026-04-21 09:49:30] 2026-04-21 13:48:55,488 | INFO     | exitmsg: OK
[2026-04-21 09:49:30] 2026-04-21 13:48:55,488 | INFO     | cpuconsumptiontime: 40694 s
[2026-04-21 09:49:30] 2026-04-21 13:48:55,488 | INFO     | nevents: 400
[2026-04-21 09:49:30] 2026-04-21 13:48:55,488 | INFO     | neventsw: 0
[2026-04-21 09:49:30] 2026-04-21 13:48:55,488 | INFO     | pid: 217513
[2026-04-21 09:49:30] 2026-04-21 13:48:55,488 | INFO     | pgrp: 217513
[2026-04-21 09:49:30] 2026-04-21 13:48:55,488 | INFO     | corecount: 12
[2026-04-21 09:49:30] 2026-04-21 13:48:55,488 | INFO     | event service: False
[2026-04-21 09:49:30] 2026-04-21 13:48:55,488 | INFO     | sizes: {0: 2283357, 11: 2283357, 4353: 2309485, 4354: 2318483, 4356: 2318539, 4357: 2318733}
[2026-04-21 09:49:30] 2026-04-21 13:48:55,488 | INFO     | --------------------------------------------------
[2026-04-21 09:49:30] 2026-04-21 13:48:55,488 | INFO     | 
[2026-04-21 09:49:30] 2026-04-21 13:48:55,488 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-04-21 09:49:30] 2026-04-21 13:48:55,562 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-21 09:49:30] 2026-04-21 13:48:55,562 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-21 09:49:30] 2026-04-21 13:48:55,562 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-21 09:49:30] 2026-04-21 13:48:55,562 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-21 09:49:30] 2026-04-21 13:48:55,562 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-21 09:49:30] 2026-04-21 13:48:55,562 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-21 09:49:30] 2026-04-21 13:48:55,562 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-21 09:49:30] 2026-04-21 13:48:55,562 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-21 09:49:30] 2026-04-21 13:48:55,562 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-21 09:49:30] 2026-04-21 13:48:55,562 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-21 09:49:30] 2026-04-21 13:48:55,562 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-21 09:49:30] 2026-04-21 13:48:55,562 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-21 09:49:30] 2026-04-21 13:48:55,562 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-21 09:49:30] 2026-04-21 13:48:55,562 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-21 09:49:30] 2026-04-21 13:48:55,562 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-21 09:49:30] 2026-04-21 13:48:55,562 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-21 09:49:30] 2026-04-21 13:48:55,563 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-21 09:49:30] 2026-04-21 13:48:55,563 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-21 09:49:30] 2026-04-21 13:48:55,563 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-21 09:49:30] 2026-04-21 13:48:55,563 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-21 09:49:30] 2026-04-21 13:48:55,563 | INFO     | job 7105310047 has completed (purged errors)
[2026-04-21 09:49:30] 2026-04-21 13:48:55,563 | INFO     | overall cleanup function is called
[2026-04-21 09:49:30] 2026-04-21 13:48:56,570 | INFO     | --- collectZombieJob: --- 10, [217513]
[2026-04-21 09:49:30] 2026-04-21 13:48:56,570 | INFO     | zombie collector waiting for pid 217513
[2026-04-21 09:49:30] 2026-04-21 13:48:56,570 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-21 09:49:30] 2026-04-21 13:48:56,570 | INFO     | collected zombie processes
[2026-04-21 09:49:30] 2026-04-21 13:48:56,570 | INFO     | will attempt to kill all subprocesses of pid=217513
[2026-04-21 09:49:30] 2026-04-21 13:48:57,068 | INFO     | process IDs to be killed: [217513] (in reverse order)
[2026-04-21 09:49:30] 2026-04-21 13:48:57,311 | WARNING  | found no corresponding commands to process id(s)
[2026-04-21 09:49:30] 2026-04-21 13:48:57,311 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-21 09:49:30] 2026-04-21 13:48:57,340 | INFO     | did not find any defunct processes belonging to 217513
[2026-04-21 09:49:30] 2026-04-21 13:48:57,367 | INFO     | did not find any defunct processes belonging to 217513
[2026-04-21 09:49:30] 2026-04-21 13:48:57,367 | INFO     | Ready for new job
[2026-04-21 09:49:30] 2026-04-21 13:48:57,368 | INFO     | **************************************
[2026-04-21 09:49:30] 2026-04-21 13:48:57,369 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-21 09:49:30] 2026-04-21 13:48:57,369 | INFO     | **************************************
[2026-04-21 09:49:30] 2026-04-21 13:48:57,369 | INFO     | 
[2026-04-21 09:49:30] 2026-04-21 13:48:57,373 | INFO     | architecture information:
[2026-04-21 09:49:30] 2026-04-21 13:48:57,373 | INFO     | executing command: cat /etc/os-release
[2026-04-21 09:49:30] 2026-04-21 13:48:57,407 | INFO     | cat /etc/os-release:
[2026-04-21 09:49:30] NAME="CentOS Linux"
[2026-04-21 09:49:30] VERSION="7 (Core)"
[2026-04-21 09:49:30] ID="centos"
[2026-04-21 09:49:30] ID_LIKE="rhel fedora"
[2026-04-21 09:49:30] VERSION_ID="7"
[2026-04-21 09:49:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-21 09:49:30] ANSI_COLOR="0;31"
[2026-04-21 09:49:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-21 09:49:30] HOME_URL="https://www.centos.org/"
[2026-04-21 09:49:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-21 09:49:30] 
[2026-04-21 09:49:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-21 09:49:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-21 09:49:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-21 09:49:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-21 09:49:30] 
[2026-04-21 09:49:30] 2026-04-21 13:48:57,408 | INFO     | **************************************
[2026-04-21 09:49:30] 2026-04-21 13:48:57,919 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-04-21 09:49:30] 2026-04-21 13:48:57,937 | INFO     | sufficient remaining disk space (150553493504 B)
[2026-04-21 09:49:30] 2026-04-21 13:48:57,940 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-21 09:49:30] 2026-04-21 13:48:57,940 | INFO     | current server update state: UPDATING_FINAL
[2026-04-21 09:49:30] 2026-04-21 13:48:57,941 | INFO     | update_server=False
[2026-04-21 09:49:30] 2026-04-21 13:48:57,941 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-21 09:49:30] 2026-04-21 13:48:57,962 | WARNING  | process 217513 can no longer be monitored (due to stat problems) - aborting
[2026-04-21 09:49:30] 2026-04-21 13:48:58,360 | INFO     | using path: /tmp/boinchome/slots/3/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 09:49:30] 2026-04-21 13:48:58,541 | INFO     | all job control threads have been joined
[2026-04-21 09:49:30] 2026-04-21 13:48:58,754 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-21 09:49:30] 2026-04-21 13:48:58,887 | INFO     | number of running child processes to parent process 217513: 1
[2026-04-21 09:49:30] 2026-04-21 13:48:58,887 | INFO     | maximum number of monitored processes: 6
[2026-04-21 09:49:30] 2026-04-21 13:48:58,888 | INFO     | aborting job monitoring since job object (job id=7105310047) has expired
[2026-04-21 09:49:30] 2026-04-21 13:48:58,888 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-21 09:49:30] 2026-04-21 13:48:58,888 | INFO     | will abort loop
[2026-04-21 09:49:30] 2026-04-21 13:48:58,946 | INFO     | [job] retrieve thread has finished
[2026-04-21 09:49:30] 2026-04-21 13:48:58,964 | INFO     | all data control threads have been joined
[2026-04-21 09:49:30] 2026-04-21 13:48:59,039 | INFO     | [payload] validate_pre thread has finished
[2026-04-21 09:49:30] 2026-04-21 13:48:59,044 | INFO     | [data] copytool_in thread has finished
[2026-04-21 09:49:30] 2026-04-21 13:48:59,248 | INFO     | [job] validate thread has finished
[2026-04-21 09:49:30] 2026-04-21 13:48:59,410 | INFO     | all payload control threads have been joined
[2026-04-21 09:49:30] 2026-04-21 13:48:59,548 | INFO     | [job] control thread has finished
[2026-04-21 09:49:30] 2026-04-21 13:48:59,612 | INFO     | [payload] validate_post thread has finished
[2026-04-21 09:49:30] 2026-04-21 13:48:59,872 | INFO     | [job] create_data_payload thread has finished
[2026-04-21 09:49:30] 2026-04-21 13:48:59,899 | INFO     | [job] job monitor thread has finished
[2026-04-21 09:49:30] 2026-04-21 13:48:59,970 | INFO     | [data] control thread has finished
[2026-04-21 09:49:30] 2026-04-21 13:49:00,244 | INFO     | [payload] execute_payloads thread has finished
[2026-04-21 09:49:30] 2026-04-21 13:49:00,407 | INFO     | [payload] failed_post thread has finished
[2026-04-21 09:49:30] 2026-04-21 13:49:00,421 | INFO     | [payload] control thread has finished
[2026-04-21 09:49:30] 2026-04-21 13:49:00,507 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-21 09:49:30] 2026-04-21 13:49:00,761 | INFO     | [data] copytool_out thread has finished
[2026-04-21 09:49:30] 2026-04-21 13:49:01,359 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-21 09:49:30] 2026-04-21 13:49:01,513 | INFO     | [job] queue monitor thread has finished
[2026-04-21 09:49:30] 2026-04-21 13:49:05,367 | INFO     | [data] queue_monitor thread has finished
[2026-04-21 09:49:30] 2026-04-21 13:49:08,961 | INFO     | job.realtimelogging is not enabled
[2026-04-21 09:49:30] 2026-04-21 13:49:09,967 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-21 09:49:30] 2026-04-21 13:49:14,343 | INFO     | [monitor] cgroup control has ended
[2026-04-21 09:49:30] 2026-04-21 13:49:15,562 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139983470073664)>', '<ExcThread(monitor, started 139983196538624)>']
[2026-04-21 09:49:30] 2026-04-21 13:49:20,587 | INFO     | all workflow threads have been joined
[2026-04-21 09:49:30] 2026-04-21 13:49:20,587 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-21 09:49:30] 2026-04-21 13:49:20,587 | INFO     | traces error code: 0
[2026-04-21 09:49:30] 2026-04-21 13:49:20,587 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-21 09:49:30] 2026-04-21 13:49:28,635 | INFO     | PID=175103 has CPU usage=9.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-21 09:49:30] 2026-04-21 13:49:28,636 | INFO     | .. there are 43 such processes running
[2026-04-21 09:49:30] 2026-04-21 13:49:28,636 | INFO     | found 0 job(s) in 20 queues
[2026-04-21 09:49:30] 2026-04-21 13:49:28,636 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-21 09:49:30] 2026-04-21 13:49:28,636 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-21 09:49:30] 2026-04-21 13:49:28,636 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-21 09:49:30] 2026-04-21 13:49:28,636 | INFO     | [monitor] control thread has ended
[2026-04-21 09:49:30] 2026-04-21 13:49:28,892 [wrapper] ==== pilot stdout END ====
[2026-04-21 09:49:30] 2026-04-21 13:49:28,899 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-21 09:49:30] 2026-04-21 13:49:28,902 [wrapper] pilotpid: 175103
[2026-04-21 09:49:30] 2026-04-21 13:49:28,915 [wrapper] Pilot exit status: 0
[2026-04-21 09:49:30] 2026-04-21 13:49:29,060 [wrapper] pandaids: 7105310047
[2026-04-21 09:49:30] 2026-04-21 13:49:29,282 [wrapper] cleanup supervisor_pilot 1202510 175104
[2026-04-21 09:49:30] 2026-04-21 13:49:29,284 [wrapper] Test setup, not cleaning
[2026-04-21 09:49:30] 2026-04-21 13:49:29,296 [wrapper] apfmon messages muted
[2026-04-21 09:49:30] 2026-04-21 13:49:29,304 [wrapper] ==== wrapper stdout END ====
[2026-04-21 09:49:30] 2026-04-21 13:49:29,334 [wrapper] ==== wrapper stderr END ====
[2026-04-21 09:49:30]  *** Error codes and diagnostics ***
[2026-04-21 09:49:30]     "exeErrorCode": 0,
[2026-04-21 09:49:30]     "pilotErrorCode": 0,
[2026-04-21 09:49:30]  *** Listing of results directory ***
[2026-04-21 09:49:30] total 2484516
[2026-04-21 09:49:30] -rw-r--r--. 1 boincer umatlas     644190 Apr 21 06:54 pilot3.tar.gz
[2026-04-21 09:49:30] -rwx------. 1 boincer umatlas      36322 Apr 21 07:04 runpilot2-wrapper.sh
[2026-04-21 09:49:30] -rw-r--r--. 1 boincer umatlas       5094 Apr 21 07:05 queuedata.json
[2026-04-21 09:49:30] -rw-r--r--. 1 boincer umatlas        100 Apr 21 08:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-21 09:49:30] -rwxr-xr-x. 1 boincer umatlas       7986 Apr 21 08:33 run_atlas
[2026-04-21 09:49:30] -rw-r--r--. 1 boincer umatlas        105 Apr 21 08:33 job.xml
[2026-04-21 09:49:30] -rw-r--r--. 2 boincer umatlas 2264395303 Apr 21 08:33 EVNT.49820242._000040.pool.root.1
[2026-04-21 09:49:30] -rw-r--r--. 2 boincer umatlas     656920 Apr 21 08:33 input.tar.gz
[2026-04-21 09:49:30] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 08:33 start_atlas.sh
[2026-04-21 09:49:30] drwxrwx--x. 2 boincer umatlas       4096 Apr 21 08:33 shared
[2026-04-21 09:49:30] -rw-r--r--. 1 boincer umatlas          0 Apr 21 08:33 boinc_lockfile
[2026-04-21 09:49:30] -rw-r--r--. 1 boincer umatlas       2551 Apr 21 08:33 pandaJob.out
[2026-04-21 09:49:30] -rw-------. 1 boincer umatlas         57 Apr 21 08:33 setup.sh.local
[2026-04-21 09:49:30] -rw-------. 1 boincer umatlas     993801 Apr 21 08:35 agis_schedconf.cvmfs.json
[2026-04-21 09:49:30] -rw-------. 1 boincer umatlas    1512404 Apr 21 08:35 agis_ddmendpoints.agis.ALL.json
[2026-04-21 09:49:30] -rw-------. 1 boincer umatlas        430 Apr 21 08:36 workernode_map.json
[2026-04-21 09:49:30] drwx------. 5 boincer umatlas       4096 Apr 21 08:36 pilot3
[2026-04-21 09:49:30] -rw-------. 1 boincer umatlas  274068139 Apr 21 09:48 HITS.49820244._014007.pool.root.1
[2026-04-21 09:49:30] -rw-r--r--. 1 boincer umatlas        488 Apr 21 09:48 boinc_task_state.xml
[2026-04-21 09:49:30] -rw-r--r--. 1 boincer umatlas       7087 Apr 21 09:48 init_data.xml
[2026-04-21 09:49:30] -rw-------. 1 boincer umatlas         95 Apr 21 09:48 pilot_heartbeat.json
[2026-04-21 09:49:30] -rw-------. 1 boincer umatlas       1046 Apr 21 09:48 memory_monitor_summary.json
[2026-04-21 09:49:30] -rw-------. 1 boincer umatlas     392097 Apr 21 09:48 log.49820244._014007.job.log.tgz.1
[2026-04-21 09:49:30] -rw-------. 1 boincer umatlas       6374 Apr 21 09:48 heartbeat_new.json
[2026-04-21 09:49:30] -rw-------. 1 boincer umatlas       6265 Apr 21 09:48 heartbeat.json
[2026-04-21 09:49:30] -rw-r--r--. 1 boincer umatlas         27 Apr 21 09:49 wrapper_checkpoint.txt
[2026-04-21 09:49:30] -rw-r--r--. 1 boincer umatlas       8192 Apr 21 09:49 boinc_mmap_file
[2026-04-21 09:49:30] -rw-------. 1 boincer umatlas        822 Apr 21 09:49 pilotlog.txt
[2026-04-21 09:49:30] -rw-------. 1 boincer umatlas     419202 Apr 21 09:49 log.49820244._014007.job.log.1
[2026-04-21 09:49:30] -rw-------. 1 boincer umatlas        357 Apr 21 09:49 output.list
[2026-04-21 09:49:30] -rw-r--r--. 1 boincer umatlas        410 Apr 21 09:49 runtime_log
[2026-04-21 09:49:30] -rw-------. 1 boincer umatlas     829440 Apr 21 09:49 result.tar.gz
[2026-04-21 09:49:30] -rw-r--r--. 1 boincer umatlas       8955 Apr 21 09:49 runtime_log.err
[2026-04-21 09:49:30] -rw-------. 1 boincer umatlas        655 Apr 21 09:49 59be0874bddf.diag
[2026-04-21 09:49:30] -rw-r--r--. 1 boincer umatlas      21117 Apr 21 09:49 stderr.txt
[2026-04-21 09:49:30] HITS file was successfully produced:
[2026-04-21 09:49:30] -rw-------. 1 boincer umatlas 274068139 Apr 21 09:48 shared/HITS.pool.root.1
[2026-04-21 09:49:30]  *** Contents of shared directory: ***
[2026-04-21 09:49:30] total 2480452
[2026-04-21 09:49:30] -rw-r--r--. 2 boincer umatlas 2264395303 Apr 21 08:33 ATLAS.root_0
[2026-04-21 09:49:30] -rw-r--r--. 2 boincer umatlas     656920 Apr 21 08:33 input.tar.gz
[2026-04-21 09:49:30] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 08:33 start_atlas.sh
[2026-04-21 09:49:30] -rw-------. 1 boincer umatlas  274068139 Apr 21 09:48 HITS.pool.root.1
[2026-04-21 09:49:30] -rw-------. 1 boincer umatlas     829440 Apr 21 09:49 result.tar.gz
09:49:31 (152715): run_atlas exited; CPU time 40844.162863
09:49:31 (152715): called boinc_finish(0)

</stderr_txt>
]]>

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