Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:59:18 (3520503): wrapper (7.7.26015): starting
18:59:18 (3520503): wrapper: running run_atlas (--nthreads 4)
[2026-04-22 18:59:18] Arguments: --nthreads 4
[2026-04-22 18:59:18] Threads: 4
[2026-04-22 18:59:18] Checking for CVMFS
[2026-04-22 18:59:18] No cvmfs_config command found, will try listing directly
[2026-04-22 18:59:18] CVMFS is ok
[2026-04-22 18:59:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-22 18:59:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-22 18:59:18] Further information can be found at the LHC@home message board.
[2026-04-22 18:59:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-22 18:59:18] Checking for apptainer binary...
[2026-04-22 18:59:18] which: no apptainer in ((null))
[2026-04-22 18:59:18] apptainer is not installed, using version from CVMFS
[2026-04-22 18:59:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-22 18:59:18] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot68/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-04-22 18:59:18] apptainer works
[2026-04-22 18:59:18] Set ATHENA_PROC_NUMBER=4
[2026-04-22 18:59:18] Set ATHENA_CORE_NUMBER=4
[2026-04-22 18:59:18] Starting ATLAS job with PandaID=7105309998
[2026-04-22 18:59:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot68/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-22 21:35:53]  *** The last 200 lines of the pilot log: ***
[2026-04-22 21:35:53] 2026-04-22 19:34:46,061 | INFO     | job 7105309998 has finished - writing final server update
[2026-04-22 21:35:53] 2026-04-22 19:34:46,062 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_9000/.job.ad'
[2026-04-22 21:35:53] 2026-04-22 19:34:46,062 | INFO     | total number of processed events: 400 (read)
[2026-04-22 21:35:53] 2026-04-22 19:34:46,076 | INFO     | using path: /var/lib/boinc/var/slot68/slots/0/PanDA_Pilot-7105309998/memory_monitor_summary.json (trf name=prmon)
[2026-04-22 21:35:53] 2026-04-22 19:34:46,077 | INFO     | extracted standard info from prmon json
[2026-04-22 21:35:53] 2026-04-22 19:34:46,077 | INFO     | extracted standard memory fields from prmon json
[2026-04-22 21:35:53] 2026-04-22 19:34:46,077 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-22 21:35:53] 2026-04-22 19:34:46,077 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-22 21:35:53] 2026-04-22 19:34:46,079 | INFO     | fitting pss+swap vs Time
[2026-04-22 21:35:53] 2026-04-22 19:34:46,079 | INFO     | sum of square deviations: 1110539892.0
[2026-04-22 21:35:53] 2026-04-22 19:34:46,079 | INFO     | sum of deviations: -1105430775.999998
[2026-04-22 21:35:53] 2026-04-22 19:34:46,079 | INFO     | mean x (centered): 0.0
[2026-04-22 21:35:53] 2026-04-22 19:34:46,080 | INFO     | mean y: 2362853.3333333335
[2026-04-22 21:35:53] 2026-04-22 19:34:46,080 | INFO     | intersect: 2362853.3333333335
[2026-04-22 21:35:53] 2026-04-22 19:34:46,080 | INFO     | chi2: 1.7825099578977706
[2026-04-22 21:35:53] 2026-04-22 19:34:46,080 | INFO     | sum of square deviations: 1005179777.0
[2026-04-22 21:35:53] 2026-04-22 19:34:46,080 | INFO     | sum of deviations: 7664771938.999991
[2026-04-22 21:35:53] 2026-04-22 19:34:46,080 | INFO     | mean x (centered): 0.0
[2026-04-22 21:35:53] 2026-04-22 19:34:46,080 | INFO     | mean y: 2375206.2702702703
[2026-04-22 21:35:53] 2026-04-22 19:34:46,080 | INFO     | intersect: 2375206.2702702703
[2026-04-22 21:35:53] 2026-04-22 19:34:46,081 | INFO     | chi2: 1.1215046058294682
[2026-04-22 21:35:53] 2026-04-22 19:34:46,081 | INFO     | current chi2=1.1215046058294682 (change=37.08284204189629 %)
[2026-04-22 21:35:53] 2026-04-22 19:34:46,081 | INFO     | sum of square deviations: 906703512.0
[2026-04-22 21:35:53] 2026-04-22 19:34:46,081 | INFO     | sum of deviations: 7381001891.0
[2026-04-22 21:35:53] 2026-04-22 19:34:46,081 | INFO     | mean x (centered): 0.0
[2026-04-22 21:35:53] 2026-04-22 19:34:46,081 | INFO     | mean y: 2374767.132867133
[2026-04-22 21:35:53] 2026-04-22 19:34:46,081 | INFO     | intersect: 2374767.132867133
[2026-04-22 21:35:53] 2026-04-22 19:34:46,082 | INFO     | chi2: 1.122472027920642
[2026-04-22 21:35:53] 2026-04-22 19:34:46,082 | INFO     | current chi2=1.122472027920642 (change=-0.08626108944583626 %)
[2026-04-22 21:35:53] 2026-04-22 19:34:46,082 | INFO     | right removable region: 142
[2026-04-22 21:35:53] 2026-04-22 19:34:46,082 | INFO     | sum of square deviations: 1005179777.0
[2026-04-22 21:35:53] 2026-04-22 19:34:46,082 | INFO     | sum of deviations: -13865668409.500002
[2026-04-22 21:35:53] 2026-04-22 19:34:46,082 | INFO     | mean x (centered): 0.0
[2026-04-22 21:35:53] 2026-04-22 19:34:46,082 | INFO     | mean y: 2380846.506756757
[2026-04-22 21:35:53] 2026-04-22 19:34:46,082 | INFO     | intersect: 2380846.506756757
[2026-04-22 21:35:53] 2026-04-22 19:34:46,082 | INFO     | chi2: 0.7252671185928471
[2026-04-22 21:35:53] 2026-04-22 19:34:46,082 | INFO     | current chi2=0.7252671185928471 (change=59.31202990595342 %)
[2026-04-22 21:35:53] 2026-04-22 19:34:46,083 | INFO     | sum of square deviations: 906703512.0
[2026-04-22 21:35:53] 2026-04-22 19:34:46,083 | INFO     | sum of deviations: -10325007681.0
[2026-04-22 21:35:53] 2026-04-22 19:34:46,083 | INFO     | mean x (centered): 0.0
[2026-04-22 21:35:53] 2026-04-22 19:34:46,083 | INFO     | mean y: 2375356.839160839
[2026-04-22 21:35:53] 2026-04-22 19:34:46,083 | INFO     | intersect: 2375356.839160839
[2026-04-22 21:35:53] 2026-04-22 19:34:46,085 | INFO     | chi2: 0.7124823844267612
[2026-04-22 21:35:53] 2026-04-22 19:34:46,085 | INFO     | current chi2=0.7124823844267612 (change=1.7627621380231193 %)
[2026-04-22 21:35:53] 2026-04-22 19:34:46,085 | INFO     | left removable region: 10
[2026-04-22 21:35:53] 2026-04-22 19:34:46,085 | INFO     | sum of square deviations: 713140813.0
[2026-04-22 21:35:53] 2026-04-22 19:34:46,086 | INFO     | sum of deviations: -1803750053.0000005
[2026-04-22 21:35:53] 2026-04-22 19:34:46,086 | INFO     | mean x (centered): 0.0
[2026-04-22 21:35:53] 2026-04-22 19:34:46,086 | INFO     | mean y: 2389123.5303030303
[2026-04-22 21:35:53] 2026-04-22 19:34:46,086 | INFO     | intersect: 2389123.5303030303
[2026-04-22 21:35:53] 2026-04-22 19:34:46,086 | INFO     | chi2: 0.030749511318482716
[2026-04-22 21:35:53] 2026-04-22 19:34:46,086 | INFO     | current memory leak: -2.53 B/s (using 132 data points, chi2=0.03)
[2026-04-22 21:35:53] 2026-04-22 19:34:46,086 | INFO     | could have reported an average CPU frequency of 2798 MHz (9 samples)
[2026-04-22 21:35:53] 2026-04-22 19:34:46,086 | INFO     | ..............................
[2026-04-22 21:35:53] 2026-04-22 19:34:46,086 | INFO     | . Timing measurements:
[2026-04-22 21:35:53] 2026-04-22 19:34:46,086 | INFO     | . get job = 0 s
[2026-04-22 21:35:53] 2026-04-22 19:34:46,086 | INFO     | . initial setup = 5 s
[2026-04-22 21:35:53] 2026-04-22 19:34:46,087 | INFO     | . payload setup = 9 s
[2026-04-22 21:35:53] 2026-04-22 19:34:46,087 | INFO     | . stage-in = 0 s
[2026-04-22 21:35:53] 2026-04-22 19:34:46,087 | INFO     | . payload execution = 9283 s
[2026-04-22 21:35:53] 2026-04-22 19:34:46,087 | INFO     | . stage-out = 0 s
[2026-04-22 21:35:53] 2026-04-22 19:34:46,087 | INFO     | . log creation = 0 s
[2026-04-22 21:35:53] 2026-04-22 19:34:46,087 | INFO     | ..............................
[2026-04-22 21:35:53] 2026-04-22 19:34:46,143 | INFO     | 
[2026-04-22 21:35:53] 2026-04-22 19:34:46,143 | INFO     | job summary report
[2026-04-22 21:35:53] 2026-04-22 19:34:46,143 | INFO     | --------------------------------------------------
[2026-04-22 21:35:53] 2026-04-22 19:34:46,143 | INFO     | PanDA job id: 7105309998
[2026-04-22 21:35:53] 2026-04-22 19:34:46,144 | INFO     | task id: 49820244
[2026-04-22 21:35:53] 2026-04-22 19:34:46,144 | INFO     | errors: (none)
[2026-04-22 21:35:53] 2026-04-22 19:34:46,144 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-22 21:35:53] 2026-04-22 19:34:46,144 | INFO     | pilot state: finished 
[2026-04-22 21:35:53] 2026-04-22 19:34:46,144 | INFO     | transexitcode: 0
[2026-04-22 21:35:53] 2026-04-22 19:34:46,144 | INFO     | exeerrorcode: 0
[2026-04-22 21:35:53] 2026-04-22 19:34:46,144 | INFO     | exeerrordiag: 
[2026-04-22 21:35:53] 2026-04-22 19:34:46,144 | INFO     | exitcode: 0
[2026-04-22 21:35:53] 2026-04-22 19:34:46,144 | INFO     | exitmsg: OK
[2026-04-22 21:35:53] 2026-04-22 19:34:46,144 | INFO     | cpuconsumptiontime: 35899 s
[2026-04-22 21:35:53] 2026-04-22 19:34:46,144 | INFO     | nevents: 400
[2026-04-22 21:35:53] 2026-04-22 19:34:46,144 | INFO     | neventsw: 0
[2026-04-22 21:35:53] 2026-04-22 19:34:46,144 | INFO     | pid: 3530052
[2026-04-22 21:35:53] 2026-04-22 19:34:46,144 | INFO     | pgrp: 3530052
[2026-04-22 21:35:53] 2026-04-22 19:34:46,144 | INFO     | corecount: 4
[2026-04-22 21:35:53] 2026-04-22 19:34:46,144 | INFO     | event service: False
[2026-04-22 21:35:53] 2026-04-22 19:34:46,145 | INFO     | sizes: {0: 2274760, 1: 2276390, 11: 2276418, 9297: 2304747, 9299: 2313823, 9300: 2314025}
[2026-04-22 21:35:53] 2026-04-22 19:34:46,145 | INFO     | --------------------------------------------------
[2026-04-22 21:35:53] 2026-04-22 19:34:46,145 | INFO     | 
[2026-04-22 21:35:53] 2026-04-22 19:34:46,145 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot68/slots/0
[2026-04-22 21:35:53] 2026-04-22 19:34:46,170 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-22 21:35:53] 2026-04-22 19:34:46,171 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-22 21:35:53] 2026-04-22 19:34:46,171 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-22 21:35:53] 2026-04-22 19:34:46,171 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-22 21:35:53] 2026-04-22 19:34:46,171 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-22 21:35:53] 2026-04-22 19:34:46,171 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-22 21:35:53] 2026-04-22 19:34:46,171 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-22 21:35:53] 2026-04-22 19:34:46,171 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-22 21:35:53] 2026-04-22 19:34:46,172 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-22 21:35:53] 2026-04-22 19:34:46,172 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-22 21:35:53] 2026-04-22 19:34:46,172 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-22 21:35:53] 2026-04-22 19:34:46,172 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-22 21:35:53] 2026-04-22 19:34:46,172 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-22 21:35:53] 2026-04-22 19:34:46,172 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-22 21:35:53] 2026-04-22 19:34:46,172 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-22 21:35:53] 2026-04-22 19:34:46,172 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-22 21:35:53] 2026-04-22 19:34:46,172 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-22 21:35:53] 2026-04-22 19:34:46,172 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-22 21:35:53] 2026-04-22 19:34:46,172 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-22 21:35:53] 2026-04-22 19:34:46,172 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-22 21:35:53] 2026-04-22 19:34:46,173 | INFO     | job 7105309998 has completed (purged errors)
[2026-04-22 21:35:53] 2026-04-22 19:34:46,173 | INFO     | overall cleanup function is called
[2026-04-22 21:35:53] 2026-04-22 19:34:47,182 | INFO     | --- collectZombieJob: --- 10, [3530052]
[2026-04-22 21:35:53] 2026-04-22 19:34:47,183 | INFO     | zombie collector waiting for pid 3530052
[2026-04-22 21:35:53] 2026-04-22 19:34:47,183 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-22 21:35:53] 2026-04-22 19:34:47,183 | INFO     | collected zombie processes
[2026-04-22 21:35:53] 2026-04-22 19:34:47,183 | INFO     | will attempt to kill all subprocesses of pid=3530052
[2026-04-22 21:35:53] 2026-04-22 19:34:47,544 | INFO     | process IDs to be killed: [3530052] (in reverse order)
[2026-04-22 21:35:53] 2026-04-22 19:34:47,682 | WARNING  | found no corresponding commands to process id(s)
[2026-04-22 21:35:53] 2026-04-22 19:34:47,683 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-22 21:35:53] 2026-04-22 19:34:47,699 | INFO     | did not find any defunct processes belonging to 3530052
[2026-04-22 21:35:53] 2026-04-22 19:34:47,712 | INFO     | did not find any defunct processes belonging to 3530052
[2026-04-22 21:35:53] 2026-04-22 19:34:47,712 | INFO     | Ready for new job
[2026-04-22 21:35:53] 2026-04-22 19:34:47,713 | INFO     | **************************************
[2026-04-22 21:35:53] 2026-04-22 19:34:47,713 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-22 21:35:53] 2026-04-22 19:34:47,713 | INFO     | **************************************
[2026-04-22 21:35:53] 2026-04-22 19:34:47,713 | INFO     | 
[2026-04-22 21:35:53] 2026-04-22 19:34:47,719 | INFO     | architecture information:
[2026-04-22 21:35:53] 2026-04-22 19:34:47,719 | INFO     | executing command: cat /etc/os-release
[2026-04-22 21:35:53] 2026-04-22 19:34:47,737 | INFO     | cat /etc/os-release:
[2026-04-22 21:35:53] NAME="CentOS Linux"
[2026-04-22 21:35:53] VERSION="7 (Core)"
[2026-04-22 21:35:53] ID="centos"
[2026-04-22 21:35:53] ID_LIKE="rhel fedora"
[2026-04-22 21:35:53] VERSION_ID="7"
[2026-04-22 21:35:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-22 21:35:53] ANSI_COLOR="0;31"
[2026-04-22 21:35:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-22 21:35:53] HOME_URL="https://www.centos.org/"
[2026-04-22 21:35:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-22 21:35:53] 
[2026-04-22 21:35:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-22 21:35:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-22 21:35:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-22 21:35:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-22 21:35:53] 
[2026-04-22 21:35:53] 2026-04-22 19:34:47,738 | INFO     | **************************************
[2026-04-22 21:35:53] 2026-04-22 19:34:48,241 | INFO     | executing command: df -mP /var/lib/boinc/var/slot68/slots/0
[2026-04-22 21:35:53] 2026-04-22 19:34:48,263 | INFO     | sufficient remaining disk space (299137761280 B)
[2026-04-22 21:35:53] 2026-04-22 19:34:48,263 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-22 21:35:53] 2026-04-22 19:34:48,263 | INFO     | current server update state: UPDATING_FINAL
[2026-04-22 21:35:53] 2026-04-22 19:34:48,263 | INFO     | update_server=False
[2026-04-22 21:35:53] 2026-04-22 19:34:48,263 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-22 21:35:53] 2026-04-22 19:34:48,264 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-22 21:35:53] 2026-04-22 19:34:48,391 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-22 21:35:53] 2026-04-22 19:34:48,391 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-22 21:35:53] 2026-04-22 19:34:48,392 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-22 21:35:53] 2026-04-22 19:34:48,392 | INFO     | will abort loop
[2026-04-22 21:35:53] 2026-04-22 19:34:48,481 | INFO     | all payload control threads have been joined
[2026-04-22 21:35:53] 2026-04-22 19:34:48,896 | INFO     | all data control threads have been joined
[2026-04-22 21:35:53] 2026-04-22 19:34:49,269 | INFO     | [job] retrieve thread has finished
[2026-04-22 21:35:53] 2026-04-22 19:34:49,357 | INFO     | all job control threads have been joined
[2026-04-22 21:35:53] 2026-04-22 19:34:49,397 | INFO     | [job] job monitor thread has finished
[2026-04-22 21:35:53] 2026-04-22 19:34:49,485 | INFO     | [payload] control thread has finished
[2026-04-22 21:35:53] 2026-04-22 19:34:49,801 | INFO     | [payload] execute_payloads thread has finished
[2026-04-22 21:35:53] 2026-04-22 19:34:49,860 | INFO     | [job] validate thread has finished
[2026-04-22 21:35:53] 2026-04-22 19:34:49,900 | INFO     | [data] control thread has finished
[2026-04-22 21:35:53] 2026-04-22 19:34:49,947 | INFO     | [payload] validate_pre thread has finished
[2026-04-22 21:35:53] 2026-04-22 19:34:49,991 | INFO     | [job] create_data_payload thread has finished
[2026-04-22 21:35:53] 2026-04-22 19:34:50,212 | INFO     | [payload] failed_post thread has finished
[2026-04-22 21:35:53] 2026-04-22 19:34:50,268 | INFO     | [data] copytool_out thread has finished
[2026-04-22 21:35:53] 2026-04-22 19:34:50,363 | INFO     | [job] control thread has finished
[2026-04-22 21:35:53] 2026-04-22 19:34:50,454 | INFO     | [data] copytool_in thread has finished
[2026-04-22 21:35:53] 2026-04-22 19:34:50,749 | INFO     | [payload] validate_post thread has finished
[2026-04-22 21:35:53] 2026-04-22 19:34:51,154 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-22 21:35:53] 2026-04-22 19:34:51,318 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-22 21:35:53] 2026-04-22 19:34:52,160 | INFO     | [job] queue monitor thread has finished
[2026-04-22 21:35:53] 2026-04-22 19:34:55,324 | INFO     | [data] queue_monitor thread has finished
[2026-04-22 21:35:53] 2026-04-22 19:34:58,821 | INFO     | job.realtimelogging is not enabled
[2026-04-22 21:35:53] 2026-04-22 19:34:59,827 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-22 21:35:53] 2026-04-22 19:35:18,589 | INFO     | PID=3524896 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-22 21:35:53] 2026-04-22 19:35:18,589 | INFO     | .. there are 4 such processes running
[2026-04-22 21:35:53] 2026-04-22 19:35:18,589 | INFO     | found 0 job(s) in 20 queues
[2026-04-22 21:35:53] 2026-04-22 19:35:18,589 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-22 21:35:53] 2026-04-22 19:35:18,589 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-22 21:35:53] 2026-04-22 19:35:47,738 | INFO     | [monitor] cgroup control has ended
[2026-04-22 21:35:53] 2026-04-22 19:35:47,816 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23440429446976)>', '<ExcThread(monitor, started 23440111154944)>']
[2026-04-22 21:35:53] 2026-04-22 19:35:48,740 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-22 21:35:53] 2026-04-22 19:35:48,740 | INFO     | [monitor] control thread has ended
[2026-04-22 21:35:53] 2026-04-22 19:35:52,842 | INFO     | all workflow threads have been joined
[2026-04-22 21:35:53] 2026-04-22 19:35:52,842 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-22 21:35:53] 2026-04-22 19:35:52,842 | INFO     | traces error code: 0
[2026-04-22 21:35:53] 2026-04-22 19:35:52,842 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-22 21:35:53] 2026-04-22 19:35:52,955 [wrapper] ==== pilot stdout END ====
[2026-04-22 21:35:53] 2026-04-22 19:35:52,959 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-22 21:35:53] 2026-04-22 19:35:52,962 [wrapper] pilotpid: 3524896
[2026-04-22 21:35:53] 2026-04-22 19:35:52,965 [wrapper] Pilot exit status: 0
[2026-04-22 21:35:53] 2026-04-22 19:35:52,977 [wrapper] pandaids: 7105309998
[2026-04-22 21:35:53] 2026-04-22 19:35:53,079 [wrapper] cleanup supervisor_pilot 3698664 3524897
[2026-04-22 21:35:53] 2026-04-22 19:35:53,082 [wrapper] Test setup, not cleaning
[2026-04-22 21:35:53] 2026-04-22 19:35:53,085 [wrapper] apfmon messages muted
[2026-04-22 21:35:53] 2026-04-22 19:35:53,088 [wrapper] ==== wrapper stdout END ====
[2026-04-22 21:35:53] 2026-04-22 19:35:53,092 [wrapper] ==== wrapper stderr END ====
[2026-04-22 21:35:53]  *** Error codes and diagnostics ***
[2026-04-22 21:35:53]     "exeErrorCode": 0,
[2026-04-22 21:35:53]     "pilotErrorCode": 0,
[2026-04-22 21:35:53]  *** Listing of results directory ***
[2026-04-22 21:35:53] total 2453948
[2026-04-22 21:35:53] -rw-r--r--. 1 boinc boinc     644190 Apr 21 12:54 pilot3.tar.gz
[2026-04-22 21:35:53] -rwx------. 1 boinc boinc      36322 Apr 21 13:04 runpilot2-wrapper.sh
[2026-04-22 21:35:53] -rw-r--r--. 1 boinc boinc       5094 Apr 21 13:05 queuedata.json
[2026-04-22 21:35:53] -rw-r--r--. 1 boinc boinc        100 Apr 22 18:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-22 21:35:53] -rwxr-xr-x. 1 boinc boinc       7986 Apr 22 18:59 run_atlas
[2026-04-22 21:35:53] -rw-r--r--. 1 boinc boinc        105 Apr 22 18:59 job.xml
[2026-04-22 21:35:53] -rw-r--r--. 1 boinc boinc       6538 Apr 22 18:59 init_data.xml
[2026-04-22 21:35:53] -rw-r--r--. 2 boinc boinc 2236782835 Apr 22 18:59 EVNT.49820242._000039.pool.root.1
[2026-04-22 21:35:53] -rw-r--r--. 2 boinc boinc      15665 Apr 22 18:59 start_atlas.sh
[2026-04-22 21:35:53] drwxrwx--x. 2 boinc boinc       4096 Apr 22 18:59 shared
[2026-04-22 21:35:53] -rw-r--r--. 2 boinc boinc     656927 Apr 22 18:59 input.tar.gz
[2026-04-22 21:35:53] -rw-r--r--. 1 boinc boinc          0 Apr 22 18:59 boinc_lockfile
[2026-04-22 21:35:53] -rw-r--r--. 1 boinc boinc       2551 Apr 22 18:59 pandaJob.out
[2026-04-22 21:35:53] -rw-------. 1 boinc boinc     997053 Apr 22 18:59 agis_schedconf.cvmfs.json
[2026-04-22 21:35:53] -rw-------. 1 boinc boinc    1509089 Apr 22 18:59 agis_ddmendpoints.agis.ALL.json
[2026-04-22 21:35:53] -rw-------. 1 boinc boinc        443 Apr 22 18:59 workernode_map.json
[2026-04-22 21:35:53] drwx------. 5 boinc boinc       4096 Apr 22 18:59 pilot3
[2026-04-22 21:35:53] -rw-------. 1 boinc boinc  269542674 Apr 22 21:34 HITS.49820244._013960.pool.root.1
[2026-04-22 21:35:53] -rw-r--r--. 1 boinc boinc        488 Apr 22 21:34 boinc_task_state.xml
[2026-04-22 21:35:53] -rw-------. 1 boinc boinc       1025 Apr 22 21:34 memory_monitor_summary.json
[2026-04-22 21:35:53] -rw-------. 1 boinc boinc     347057 Apr 22 21:34 log.49820244._013960.job.log.tgz.1
[2026-04-22 21:35:53] -rw-------. 1 boinc boinc         95 Apr 22 21:34 pilot_heartbeat.json
[2026-04-22 21:35:53] -rw-------. 1 boinc boinc       6365 Apr 22 21:34 heartbeat_new.json
[2026-04-22 21:35:53] -rw-------. 1 boinc boinc       6256 Apr 22 21:34 heartbeat.json
[2026-04-22 21:35:53] -rw-r--r--. 1 boinc boinc         27 Apr 22 21:35 wrapper_checkpoint.txt
[2026-04-22 21:35:53] -rw-r--r--. 1 boinc boinc       8192 Apr 22 21:35 boinc_mmap_file
[2026-04-22 21:35:53] -rw-------. 1 boinc boinc       5086 Apr 22 21:35 pilotlog.txt
[2026-04-22 21:35:53] -rw-------. 1 boinc boinc     883712 Apr 22 21:35 log.49820244._013960.job.log.1
[2026-04-22 21:35:53] -rw-------. 1 boinc boinc        357 Apr 22 21:35 output.list
[2026-04-22 21:35:53] -rw-r--r--. 1 boinc boinc        410 Apr 22 21:35 runtime_log
[2026-04-22 21:35:53] -rw-------. 1 boinc boinc    1249280 Apr 22 21:35 result.tar.gz
[2026-04-22 21:35:53] -rw-r--r--. 1 boinc boinc       8826 Apr 22 21:35 runtime_log.err
[2026-04-22 21:35:53] -rw-------. 1 boinc boinc        662 Apr 22 21:35 59b1d21f2c5a.diag
[2026-04-22 21:35:53] -rw-r--r--. 1 boinc boinc      20794 Apr 22 21:35 stderr.txt
[2026-04-22 21:35:53] HITS file was successfully produced:
[2026-04-22 21:35:53] -rw-------. 1 boinc boinc 269542674 Apr 22 21:34 shared/HITS.pool.root.1
[2026-04-22 21:35:53]  *** Contents of shared directory: ***
[2026-04-22 21:35:53] total 2449476
[2026-04-22 21:35:53] -rw-r--r--. 2 boinc boinc 2236782835 Apr 22 18:59 ATLAS.root_0
[2026-04-22 21:35:53] -rw-r--r--. 2 boinc boinc      15665 Apr 22 18:59 start_atlas.sh
[2026-04-22 21:35:53] -rw-r--r--. 2 boinc boinc     656927 Apr 22 18:59 input.tar.gz
[2026-04-22 21:35:53] -rw-------. 1 boinc boinc  269542674 Apr 22 21:34 HITS.pool.root.1
[2026-04-22 21:35:53] -rw-------. 1 boinc boinc    1249280 Apr 22 21:35 result.tar.gz
21:35:55 (3520503): run_atlas exited; CPU time 36207.895106
21:35:55 (3520503): called boinc_finish(0)

</stderr_txt>
]]>

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