Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:00:06 (1866586): wrapper (7.7.26015): starting
04:00:06 (1866586): wrapper: running run_atlas (--nthreads 4)
[2026-04-22 04:00:06] Arguments: --nthreads 4
[2026-04-22 04:00:06] Threads: 4
[2026-04-22 04:00:06] Checking for CVMFS
[2026-04-22 04:00:06] No cvmfs_config command found, will try listing directly
[2026-04-22 04:00:06] CVMFS is ok
[2026-04-22 04:00:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-22 04:00:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-22 04:00:06] Further information can be found at the LHC@home message board.
[2026-04-22 04:00:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-22 04:00:06] Checking for apptainer binary...
[2026-04-22 04:00:06] which: no apptainer in ((null))
[2026-04-22 04:00:06] apptainer is not installed, using version from CVMFS
[2026-04-22 04:00:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-22 04:00:07] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot48/slots/4/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2026-04-22 04:00:07] apptainer works
[2026-04-22 04:00:07] Set ATHENA_PROC_NUMBER=4
[2026-04-22 04:00:07] Set ATHENA_CORE_NUMBER=4
[2026-04-22 04:00:07] Starting ATLAS job with PandaID=7105078648
[2026-04-22 04:00:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot48/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-22 07:42:54]  *** The last 200 lines of the pilot log: ***
[2026-04-22 07:42:54] 2026-04-22 05:41:49,311 | INFO     | job 7105078648 has finished - writing final server update
[2026-04-22 07:42:54] 2026-04-22 05:41:49,311 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_8913/.job.ad'
[2026-04-22 07:42:54] 2026-04-22 05:41:49,311 | INFO     | total number of processed events: 400 (read)
[2026-04-22 07:42:54] 2026-04-22 05:41:49,335 | INFO     | using path: /var/lib/boinc/var/slot48/slots/4/PanDA_Pilot-7105078648/memory_monitor_summary.json (trf name=prmon)
[2026-04-22 07:42:54] 2026-04-22 05:41:49,335 | INFO     | extracted standard info from prmon json
[2026-04-22 07:42:54] 2026-04-22 05:41:49,335 | INFO     | extracted standard memory fields from prmon json
[2026-04-22 07:42:54] 2026-04-22 05:41:49,336 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-22 07:42:54] 2026-04-22 05:41:49,336 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-22 07:42:54] 2026-04-22 05:41:49,339 | INFO     | fitting pss+swap vs Time
[2026-04-22 07:42:54] 2026-04-22 05:41:49,340 | INFO     | sum of square deviations: 3212467674.5
[2026-04-22 07:42:54] 2026-04-22 05:41:49,341 | INFO     | sum of deviations: 25524844727.5
[2026-04-22 07:42:54] 2026-04-22 05:41:49,341 | INFO     | mean x (centered): 0.0
[2026-04-22 07:42:54] 2026-04-22 05:41:49,342 | INFO     | mean y: 2341863.26146789
[2026-04-22 07:42:54] 2026-04-22 05:41:49,342 | INFO     | intersect: 2341863.26146789
[2026-04-22 07:42:54] 2026-04-22 05:41:49,342 | INFO     | chi2: 2.0916874322677437
[2026-04-22 07:42:54] 2026-04-22 05:41:49,342 | INFO     | sum of square deviations: 2996454322.0
[2026-04-22 07:42:54] 2026-04-22 05:41:49,344 | INFO     | sum of deviations: 38230708852.00001
[2026-04-22 07:42:54] 2026-04-22 05:41:49,344 | INFO     | mean x (centered): 0.0
[2026-04-22 07:42:54] 2026-04-22 05:41:49,344 | INFO     | mean y: 2350654.056338028
[2026-04-22 07:42:54] 2026-04-22 05:41:49,344 | INFO     | intersect: 2350654.056338028
[2026-04-22 07:42:54] 2026-04-22 05:41:49,344 | INFO     | chi2: 1.3237342340293765
[2026-04-22 07:42:54] 2026-04-22 05:41:49,345 | INFO     | current chi2=1.3237342340293765 (change=36.714529446006935 %)
[2026-04-22 07:42:54] 2026-04-22 05:41:49,345 | INFO     | sum of square deviations: 2790348132.0
[2026-04-22 07:42:54] 2026-04-22 05:41:49,346 | INFO     | sum of deviations: 36988055495.5
[2026-04-22 07:42:54] 2026-04-22 05:41:49,346 | INFO     | mean x (centered): 0.0
[2026-04-22 07:42:54] 2026-04-22 05:41:49,346 | INFO     | mean y: 2349734.216346154
[2026-04-22 07:42:54] 2026-04-22 05:41:49,347 | INFO     | intersect: 2349734.216346154
[2026-04-22 07:42:54] 2026-04-22 05:41:49,347 | INFO     | chi2: 1.3241501767692745
[2026-04-22 07:42:54] 2026-04-22 05:41:49,347 | INFO     | current chi2=1.3241501767692745 (change=-0.03142192210530592 %)
[2026-04-22 07:42:54] 2026-04-22 05:41:49,347 | INFO     | right removable region: 207
[2026-04-22 07:42:54] 2026-04-22 05:41:49,347 | INFO     | sum of square deviations: 2996454322.0
[2026-04-22 07:42:54] 2026-04-22 05:41:49,349 | INFO     | sum of deviations: -2794942408.000002
[2026-04-22 07:42:54] 2026-04-22 05:41:49,349 | INFO     | mean x (centered): 0.0
[2026-04-22 07:42:54] 2026-04-22 05:41:49,349 | INFO     | mean y: 2361623.9859154928
[2026-04-22 07:42:54] 2026-04-22 05:41:49,349 | INFO     | intersect: 2361623.9859154928
[2026-04-22 07:42:54] 2026-04-22 05:41:49,349 | INFO     | chi2: 0.788892464767267
[2026-04-22 07:42:54] 2026-04-22 05:41:49,349 | INFO     | current chi2=0.788892464767267 (change=62.28440002089729 %)
[2026-04-22 07:42:54] 2026-04-22 05:41:49,350 | INFO     | sum of square deviations: 2790348132.0
[2026-04-22 07:42:54] 2026-04-22 05:41:49,351 | INFO     | sum of deviations: -4077355320.5
[2026-04-22 07:42:54] 2026-04-22 05:41:49,351 | INFO     | mean x (centered): 0.0
[2026-04-22 07:42:54] 2026-04-22 05:41:49,351 | INFO     | mean y: 2362561.918269231
[2026-04-22 07:42:54] 2026-04-22 05:41:49,351 | INFO     | intersect: 2362561.918269231
[2026-04-22 07:42:54] 2026-04-22 05:41:49,352 | INFO     | chi2: 0.7855468456536989
[2026-04-22 07:42:54] 2026-04-22 05:41:49,352 | INFO     | current chi2=0.7855468456536989 (change=0.4240906413721571 %)
[2026-04-22 07:42:54] 2026-04-22 05:41:49,352 | INFO     | left removable region: 10
[2026-04-22 07:42:54] 2026-04-22 05:41:49,352 | INFO     | sum of square deviations: 2370641658.0
[2026-04-22 07:42:54] 2026-04-22 05:41:49,353 | INFO     | sum of deviations: 8094969559.0
[2026-04-22 07:42:54] 2026-04-22 05:41:49,353 | INFO     | mean x (centered): 0.0
[2026-04-22 07:42:54] 2026-04-22 05:41:49,353 | INFO     | mean y: 2371787.7969543147
[2026-04-22 07:42:54] 2026-04-22 05:41:49,354 | INFO     | intersect: 2371787.7969543147
[2026-04-22 07:42:54] 2026-04-22 05:41:49,354 | INFO     | chi2: 0.000841346984527447
[2026-04-22 07:42:54] 2026-04-22 05:41:49,354 | INFO     | current memory leak: 3.41 B/s (using 197 data points, chi2=0.00)
[2026-04-22 07:42:54] 2026-04-22 05:41:49,354 | INFO     | could have reported an average CPU frequency of 2813 MHz (11 samples)
[2026-04-22 07:42:54] 2026-04-22 05:41:49,354 | INFO     | ..............................
[2026-04-22 07:42:54] 2026-04-22 05:41:49,355 | INFO     | . Timing measurements:
[2026-04-22 07:42:54] 2026-04-22 05:41:49,355 | INFO     | . get job = 0 s
[2026-04-22 07:42:54] 2026-04-22 05:41:49,355 | INFO     | . initial setup = 7 s
[2026-04-22 07:42:54] 2026-04-22 05:41:49,355 | INFO     | . payload setup = 13 s
[2026-04-22 07:42:54] 2026-04-22 05:41:49,355 | INFO     | . stage-in = 0 s
[2026-04-22 07:42:54] 2026-04-22 05:41:49,355 | INFO     | . payload execution = 13248 s
[2026-04-22 07:42:54] 2026-04-22 05:41:49,355 | INFO     | . stage-out = 1 s
[2026-04-22 07:42:54] 2026-04-22 05:41:49,355 | INFO     | . log creation = 0 s
[2026-04-22 07:42:54] 2026-04-22 05:41:49,355 | INFO     | ..............................
[2026-04-22 07:42:54] 2026-04-22 05:41:49,445 | INFO     | 
[2026-04-22 07:42:54] 2026-04-22 05:41:49,445 | INFO     | job summary report
[2026-04-22 07:42:54] 2026-04-22 05:41:49,446 | INFO     | --------------------------------------------------
[2026-04-22 07:42:54] 2026-04-22 05:41:49,446 | INFO     | PanDA job id: 7105078648
[2026-04-22 07:42:54] 2026-04-22 05:41:49,446 | INFO     | task id: 49820244
[2026-04-22 07:42:54] 2026-04-22 05:41:49,446 | INFO     | errors: (none)
[2026-04-22 07:42:54] 2026-04-22 05:41:49,446 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-22 07:42:54] 2026-04-22 05:41:49,446 | INFO     | pilot state: finished 
[2026-04-22 07:42:54] 2026-04-22 05:41:49,446 | INFO     | transexitcode: 0
[2026-04-22 07:42:54] 2026-04-22 05:41:49,446 | INFO     | exeerrorcode: 0
[2026-04-22 07:42:54] 2026-04-22 05:41:49,446 | INFO     | exeerrordiag: 
[2026-04-22 07:42:54] 2026-04-22 05:41:49,446 | INFO     | exitcode: 0
[2026-04-22 07:42:54] 2026-04-22 05:41:49,446 | INFO     | exitmsg: OK
[2026-04-22 07:42:54] 2026-04-22 05:41:49,446 | INFO     | cpuconsumptiontime: 51059 s
[2026-04-22 07:42:54] 2026-04-22 05:41:49,447 | INFO     | nevents: 400
[2026-04-22 07:42:54] 2026-04-22 05:41:49,447 | INFO     | neventsw: 0
[2026-04-22 07:42:54] 2026-04-22 05:41:49,447 | INFO     | pid: 1885626
[2026-04-22 07:42:54] 2026-04-22 05:41:49,447 | INFO     | pgrp: 1885626
[2026-04-22 07:42:54] 2026-04-22 05:41:49,447 | INFO     | corecount: 4
[2026-04-22 07:42:54] 2026-04-22 05:41:49,447 | INFO     | event service: False
[2026-04-22 07:42:54] 2026-04-22 05:41:49,447 | INFO     | sizes: {0: 2273921, 1: 2276418, 12: 2276418, 13265: 2307355, 13267: 2316431, 13270: 2316569}
[2026-04-22 07:42:54] 2026-04-22 05:41:49,447 | INFO     | --------------------------------------------------
[2026-04-22 07:42:54] 2026-04-22 05:41:49,447 | INFO     | 
[2026-04-22 07:42:54] 2026-04-22 05:41:49,447 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot48/slots/4
[2026-04-22 07:42:54] 2026-04-22 05:41:49,480 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-22 07:42:54] 2026-04-22 05:41:49,481 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-22 07:42:54] 2026-04-22 05:41:49,481 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-22 07:42:54] 2026-04-22 05:41:49,481 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-22 07:42:54] 2026-04-22 05:41:49,481 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-22 07:42:54] 2026-04-22 05:41:49,481 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-22 07:42:54] 2026-04-22 05:41:49,481 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-22 07:42:54] 2026-04-22 05:41:49,481 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-22 07:42:54] 2026-04-22 05:41:49,481 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-22 07:42:54] 2026-04-22 05:41:49,481 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-22 07:42:54] 2026-04-22 05:41:49,482 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-22 07:42:54] 2026-04-22 05:41:49,482 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-22 07:42:54] 2026-04-22 05:41:49,482 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-22 07:42:54] 2026-04-22 05:41:49,482 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-22 07:42:54] 2026-04-22 05:41:49,482 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-22 07:42:54] 2026-04-22 05:41:49,482 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-22 07:42:54] 2026-04-22 05:41:49,482 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-22 07:42:54] 2026-04-22 05:41:49,482 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-22 07:42:54] 2026-04-22 05:41:49,482 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-22 07:42:54] 2026-04-22 05:41:49,482 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-22 07:42:54] 2026-04-22 05:41:49,483 | INFO     | job 7105078648 has completed (purged errors)
[2026-04-22 07:42:54] 2026-04-22 05:41:49,483 | INFO     | overall cleanup function is called
[2026-04-22 07:42:54] 2026-04-22 05:41:50,493 | INFO     | --- collectZombieJob: --- 10, [1885626]
[2026-04-22 07:42:54] 2026-04-22 05:41:50,493 | INFO     | zombie collector waiting for pid 1885626
[2026-04-22 07:42:54] 2026-04-22 05:41:50,493 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-22 07:42:54] 2026-04-22 05:41:50,493 | INFO     | collected zombie processes
[2026-04-22 07:42:54] 2026-04-22 05:41:50,494 | INFO     | will attempt to kill all subprocesses of pid=1885626
[2026-04-22 07:42:54] 2026-04-22 05:41:51,211 | INFO     | process IDs to be killed: [1885626] (in reverse order)
[2026-04-22 07:42:54] 2026-04-22 05:41:51,469 | WARNING  | found no corresponding commands to process id(s)
[2026-04-22 07:42:54] 2026-04-22 05:41:51,469 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-22 07:42:54] 2026-04-22 05:41:51,498 | INFO     | did not find any defunct processes belonging to 1885626
[2026-04-22 07:42:54] 2026-04-22 05:41:51,519 | INFO     | did not find any defunct processes belonging to 1885626
[2026-04-22 07:42:54] 2026-04-22 05:41:51,519 | INFO     | Ready for new job
[2026-04-22 07:42:54] 2026-04-22 05:41:51,522 | INFO     | **************************************
[2026-04-22 07:42:54] 2026-04-22 05:41:51,522 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-22 07:42:54] 2026-04-22 05:41:51,522 | INFO     | **************************************
[2026-04-22 07:42:54] 2026-04-22 05:41:51,522 | INFO     | 
[2026-04-22 07:42:54] 2026-04-22 05:41:51,531 | INFO     | architecture information:
[2026-04-22 07:42:54] 2026-04-22 05:41:51,531 | INFO     | executing command: cat /etc/os-release
[2026-04-22 07:42:54] 2026-04-22 05:41:51,557 | INFO     | cat /etc/os-release:
[2026-04-22 07:42:54] NAME="CentOS Linux"
[2026-04-22 07:42:54] VERSION="7 (Core)"
[2026-04-22 07:42:54] ID="centos"
[2026-04-22 07:42:54] ID_LIKE="rhel fedora"
[2026-04-22 07:42:54] VERSION_ID="7"
[2026-04-22 07:42:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-22 07:42:54] ANSI_COLOR="0;31"
[2026-04-22 07:42:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-22 07:42:54] HOME_URL="https://www.centos.org/"
[2026-04-22 07:42:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-22 07:42:54] 
[2026-04-22 07:42:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-22 07:42:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-22 07:42:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-22 07:42:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-22 07:42:54] 
[2026-04-22 07:42:54] 2026-04-22 05:41:51,557 | INFO     | **************************************
[2026-04-22 07:42:54] 2026-04-22 05:41:52,060 | INFO     | executing command: df -mP /var/lib/boinc/var/slot48/slots/4
[2026-04-22 07:42:54] 2026-04-22 05:41:52,088 | INFO     | sufficient remaining disk space (130385182720 B)
[2026-04-22 07:42:54] 2026-04-22 05:41:52,089 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-22 07:42:54] 2026-04-22 05:41:52,089 | INFO     | current server update state: UPDATING_FINAL
[2026-04-22 07:42:54] 2026-04-22 05:41:52,089 | INFO     | update_server=False
[2026-04-22 07:42:54] 2026-04-22 05:41:52,089 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-22 07:42:54] 2026-04-22 05:41:52,126 | INFO     | all data control threads have been joined
[2026-04-22 07:42:54] 2026-04-22 05:41:52,325 | INFO     | all payload control threads have been joined
[2026-04-22 07:42:54] 2026-04-22 05:41:52,521 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-22 07:42:54] 2026-04-22 05:41:52,521 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-22 07:42:54] 2026-04-22 05:41:52,521 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-22 07:42:54] 2026-04-22 05:41:52,522 | INFO     | will abort loop
[2026-04-22 07:42:54] 2026-04-22 05:41:52,585 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-22 07:42:54] 2026-04-22 05:41:53,095 | INFO     | [job] retrieve thread has finished
[2026-04-22 07:42:54] 2026-04-22 05:41:53,123 | INFO     | [payload] validate_pre thread has finished
[2026-04-22 07:42:54] 2026-04-22 05:41:53,131 | INFO     | [data] control thread has finished
[2026-04-22 07:42:54] 2026-04-22 05:41:53,178 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-22 07:42:54] 2026-04-22 05:41:53,216 | INFO     | [payload] failed_post thread has finished
[2026-04-22 07:42:54] 2026-04-22 05:41:53,329 | INFO     | [data] copytool_in thread has finished
[2026-04-22 07:42:54] 2026-04-22 05:41:53,330 | INFO     | [payload] control thread has finished
[2026-04-22 07:42:54] 2026-04-22 05:41:53,526 | INFO     | [job] job monitor thread has finished
[2026-04-22 07:42:54] 2026-04-22 05:41:53,703 | INFO     | all job control threads have been joined
[2026-04-22 07:42:54] 2026-04-22 05:41:53,864 | INFO     | [payload] execute_payloads thread has finished
[2026-04-22 07:42:54] 2026-04-22 05:41:54,103 | INFO     | [job] validate thread has finished
[2026-04-22 07:42:54] 2026-04-22 05:41:54,423 | INFO     | [job] create_data_payload thread has finished
[2026-04-22 07:42:54] 2026-04-22 05:41:54,455 | INFO     | [payload] validate_post thread has finished
[2026-04-22 07:42:54] 2026-04-22 05:41:54,456 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-22 07:42:54] 2026-04-22 05:41:54,590 | INFO     | [data] copytool_out thread has finished
[2026-04-22 07:42:54] 2026-04-22 05:41:54,707 | INFO     | [job] control thread has finished
[2026-04-22 07:42:54] 2026-04-22 05:41:55,463 | INFO     | [job] queue monitor thread has finished
[2026-04-22 07:42:54] 2026-04-22 05:41:57,184 | INFO     | [data] queue_monitor thread has finished
[2026-04-22 07:42:54] 2026-04-22 05:42:03,134 | INFO     | job.realtimelogging is not enabled
[2026-04-22 07:42:54] 2026-04-22 05:42:04,139 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-22 07:42:54] 2026-04-22 05:42:23,162 | INFO     | PID=1873483 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-22 07:42:54] 2026-04-22 05:42:23,162 | INFO     | .. there are 12 such processes running
[2026-04-22 07:42:54] 2026-04-22 05:42:23,163 | INFO     | found 0 job(s) in 20 queues
[2026-04-22 07:42:54] 2026-04-22 05:42:23,164 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-22 07:42:54] 2026-04-22 05:42:23,164 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-22 07:42:54] 2026-04-22 05:42:46,601 | INFO     | [monitor] cgroup control has ended
[2026-04-22 07:42:54] 2026-04-22 05:42:48,695 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23230438958912)>', '<ExcThread(monitor, started 23230123316992)>']
[2026-04-22 07:42:54] 2026-04-22 05:42:49,292 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-22 07:42:54] 2026-04-22 05:42:49,292 | INFO     | [monitor] control thread has ended
[2026-04-22 07:42:54] 2026-04-22 05:42:53,721 | INFO     | all workflow threads have been joined
[2026-04-22 07:42:54] 2026-04-22 05:42:53,721 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-22 07:42:54] 2026-04-22 05:42:53,721 | INFO     | traces error code: 0
[2026-04-22 07:42:54] 2026-04-22 05:42:53,722 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-22 07:42:54] 2026-04-22 05:42:53,840 [wrapper] ==== pilot stdout END ====
[2026-04-22 07:42:54] 2026-04-22 05:42:53,844 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-22 07:42:54] 2026-04-22 05:42:53,847 [wrapper] pilotpid: 1873483
[2026-04-22 07:42:54] 2026-04-22 05:42:53,851 [wrapper] Pilot exit status: 0
[2026-04-22 07:42:54] 2026-04-22 05:42:53,865 [wrapper] pandaids: 7105078648
[2026-04-22 07:42:54] 2026-04-22 05:42:54,035 [wrapper] cleanup supervisor_pilot 2199771 1873484
[2026-04-22 07:42:54] 2026-04-22 05:42:54,039 [wrapper] Test setup, not cleaning
[2026-04-22 07:42:54] 2026-04-22 05:42:54,043 [wrapper] apfmon messages muted
[2026-04-22 07:42:54] 2026-04-22 05:42:54,047 [wrapper] ==== wrapper stdout END ====
[2026-04-22 07:42:54] 2026-04-22 05:42:54,051 [wrapper] ==== wrapper stderr END ====
[2026-04-22 07:42:54]  *** Error codes and diagnostics ***
[2026-04-22 07:42:54]     "exeErrorCode": 0,
[2026-04-22 07:42:54]     "pilotErrorCode": 0,
[2026-04-22 07:42:54]  *** Listing of results directory ***
[2026-04-22 07:42:54] total 2454012
[2026-04-22 07:42:54] -rwx------. 1 boinc boinc      36322 Apr 21 09:43 runpilot2-wrapper.sh
[2026-04-22 07:42:54] -rw-r--r--. 1 boinc boinc     644190 Apr 21 11:10 pilot3.tar.gz
[2026-04-22 07:42:54] -rw-r--r--. 1 boinc boinc       5094 Apr 21 11:22 queuedata.json
[2026-04-22 07:42:54] -rw-r--r--. 1 boinc boinc        100 Apr 22 03:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-22 07:42:54] -rwxr-xr-x. 1 boinc boinc       7986 Apr 22 03:59 run_atlas
[2026-04-22 07:42:54] -rw-r--r--. 1 boinc boinc        105 Apr 22 03:59 job.xml
[2026-04-22 07:42:54] -rw-r--r--. 2 boinc boinc 2227868872 Apr 22 04:00 EVNT.49820242._000022.pool.root.1
[2026-04-22 07:42:54] -rw-r--r--. 1 boinc boinc       6537 Apr 22 04:00 init_data.xml
[2026-04-22 07:42:54] -rw-r--r--. 2 boinc boinc      15665 Apr 22 04:00 start_atlas.sh
[2026-04-22 07:42:54] drwxrwx--x. 2 boinc boinc       4096 Apr 22 04:00 shared
[2026-04-22 07:42:54] -rw-r--r--. 2 boinc boinc     656918 Apr 22 04:00 input.tar.gz
[2026-04-22 07:42:54] -rw-r--r--. 1 boinc boinc          0 Apr 22 04:00 boinc_lockfile
[2026-04-22 07:42:54] -rw-r--r--. 1 boinc boinc       2551 Apr 22 04:00 pandaJob.out
[2026-04-22 07:42:54] -rw-------. 1 boinc boinc     997050 Apr 22 04:00 agis_schedconf.cvmfs.json
[2026-04-22 07:42:54] -rw-------. 1 boinc boinc        440 Apr 22 04:00 workernode_map.json
[2026-04-22 07:42:54] drwx------. 5 boinc boinc       4096 Apr 22 04:00 pilot3
[2026-04-22 07:42:54] -rw-------. 1 boinc boinc  277781210 Apr 22 07:41 HITS.49820244._012787.pool.root.1
[2026-04-22 07:42:54] -rw-r--r--. 1 boinc boinc        488 Apr 22 07:41 boinc_task_state.xml
[2026-04-22 07:42:54] -rw-------. 1 boinc boinc       1028 Apr 22 07:41 memory_monitor_summary.json
[2026-04-22 07:42:54] -rw-------. 1 boinc boinc    1509089 Apr 22 07:41 agis_ddmendpoints.agis.ALL.json
[2026-04-22 07:42:54] -rw-------. 1 boinc boinc     364006 Apr 22 07:41 log.49820244._012787.job.log.tgz.1
[2026-04-22 07:42:54] -rw-------. 1 boinc boinc       6363 Apr 22 07:41 heartbeat_new.json
[2026-04-22 07:42:54] -rw-------. 1 boinc boinc       6254 Apr 22 07:41 heartbeat.json
[2026-04-22 07:42:54] -rw-------. 1 boinc boinc         95 Apr 22 07:42 pilot_heartbeat.json
[2026-04-22 07:42:54] -rw-r--r--. 1 boinc boinc       8192 Apr 22 07:42 boinc_mmap_file
[2026-04-22 07:42:54] -rw-------. 1 boinc boinc       5087 Apr 22 07:42 pilotlog.txt
[2026-04-22 07:42:54] -rw-r--r--. 1 boinc boinc         27 Apr 22 07:42 wrapper_checkpoint.txt
[2026-04-22 07:42:54] -rw-------. 1 boinc boinc    1238627 Apr 22 07:42 log.49820244._012787.job.log.1
[2026-04-22 07:42:54] -rw-------. 1 boinc boinc        357 Apr 22 07:42 output.list
[2026-04-22 07:42:54] -rw-r--r--. 1 boinc boinc        410 Apr 22 07:42 runtime_log
[2026-04-22 07:42:54] -rw-------. 1 boinc boinc    1617920 Apr 22 07:42 result.tar.gz
[2026-04-22 07:42:54] -rw-r--r--. 1 boinc boinc       8827 Apr 22 07:42 runtime_log.err
[2026-04-22 07:42:54] -rw-------. 1 boinc boinc        665 Apr 22 07:42 2a82a2c05d2d.diag
[2026-04-22 07:42:54] -rw-r--r--. 1 boinc boinc      20787 Apr 22 07:42 stderr.txt
[2026-04-22 07:42:54] HITS file was successfully produced:
[2026-04-22 07:42:54] -rw-------. 1 boinc boinc 277781210 Apr 22 07:41 shared/HITS.pool.root.1
[2026-04-22 07:42:54]  *** Contents of shared directory: ***
[2026-04-22 07:42:54] total 2449176
[2026-04-22 07:42:54] -rw-r--r--. 2 boinc boinc 2227868872 Apr 22 04:00 ATLAS.root_0
[2026-04-22 07:42:54] -rw-r--r--. 2 boinc boinc      15665 Apr 22 04:00 start_atlas.sh
[2026-04-22 07:42:54] -rw-r--r--. 2 boinc boinc     656918 Apr 22 04:00 input.tar.gz
[2026-04-22 07:42:54] -rw-------. 1 boinc boinc  277781210 Apr 22 07:41 HITS.pool.root.1
[2026-04-22 07:42:54] -rw-------. 1 boinc boinc    1617920 Apr 22 07:42 result.tar.gz
07:42:55 (1866586): run_atlas exited; CPU time 51851.492432
07:42:55 (1866586): called boinc_finish(0)

</stderr_txt>
]]>

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