Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:38:02 (3550580): wrapper (7.7.26015): starting
07:38:02 (3550580): wrapper: running run_atlas (--nthreads 8)
[2026-04-21 07:38:02] Arguments: --nthreads 8
[2026-04-21 07:38:02] Threads: 8
[2026-04-21 07:38:02] Checking for CVMFS
[2026-04-21 07:38:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-21 07:38:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-21 07:38:03] Running cvmfs_config stat atlas.cern.ch
[2026-04-21 07:38:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-21 07:38:04] 2.13.3.0 3085114 108971 935880 158689 0 454 27147202 32935936 30781 16776704 1 829384600 99.765 553663359 15315 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-21 07:38:04] CVMFS is ok
[2026-04-21 07:38:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 07:38:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 07:38:05] Further information can be found at the LHC@home message board.
[2026-04-21 07:38:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 07:38:05] Checking for apptainer binary...
[2026-04-21 07:38:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-21 07:38:05] Running /usr/bin/apptainer --version
[2026-04-21 07:38:05] apptainer version 1.4.5-2.el9
[2026-04-21 07:38:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 07:38:06] lc-12-33.aglt2.org
[2026-04-21 07:38:06] apptainer works
[2026-04-21 07:38:06] Set ATHENA_PROC_NUMBER=8
[2026-04-21 07:38:06] Set ATHENA_CORE_NUMBER=8
[2026-04-21 07:38:06] Starting ATLAS job with PandaID=7105309058
[2026-04-21 07:38:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-21 11:43:00]  *** The last 200 lines of the pilot log: ***
[2026-04-21 11:43:00] 2026-04-21 15:42:16,618 | INFO     | mean y: 2463124.6343612336
[2026-04-21 11:43:00] 2026-04-21 15:42:16,619 | INFO     | intersect: 2463124.6343612336
[2026-04-21 11:43:00] 2026-04-21 15:42:16,619 | INFO     | chi2: 9.408389062824993
[2026-04-21 11:43:00] 2026-04-21 15:42:16,619 | INFO     | current chi2=9.408389062824993 (change=6.060296589132493 %)
[2026-04-21 11:43:00] 2026-04-21 15:42:16,619 | INFO     | right removable region: 226
[2026-04-21 11:43:00] 2026-04-21 15:42:16,619 | INFO     | sum of square deviations: 3626788854.854633
[2026-04-21 11:43:00] 2026-04-21 15:42:16,621 | INFO     | sum of deviations: 87789854794.34807
[2026-04-21 11:43:00] 2026-04-21 15:42:16,621 | INFO     | mean x (centered): 0.0
[2026-04-21 11:43:00] 2026-04-21 15:42:16,621 | INFO     | mean y: 2510509.0616740086
[2026-04-21 11:43:00] 2026-04-21 15:42:16,621 | INFO     | intersect: 2510509.0616740086
[2026-04-21 11:43:00] 2026-04-21 15:42:16,621 | INFO     | chi2: 4.244106276625844
[2026-04-21 11:43:00] 2026-04-21 15:42:16,622 | INFO     | current chi2=4.244106276625844 (change=57.623979811191916 %)
[2026-04-21 11:43:00] 2026-04-21 15:42:16,622 | INFO     | sum of square deviations: 3392343437.1711774
[2026-04-21 11:43:00] 2026-04-21 15:42:16,623 | INFO     | sum of deviations: 21791120117.27025
[2026-04-21 11:43:00] 2026-04-21 15:42:16,624 | INFO     | mean x (centered): 0.0
[2026-04-21 11:43:00] 2026-04-21 15:42:16,624 | INFO     | mean y: 2553376.621621622
[2026-04-21 11:43:00] 2026-04-21 15:42:16,624 | INFO     | intersect: 2553376.621621622
[2026-04-21 11:43:00] 2026-04-21 15:42:16,624 | INFO     | chi2: 1.1894906410930484
[2026-04-21 11:43:00] 2026-04-21 15:42:16,624 | INFO     | current chi2=1.1894906410930484 (change=71.97311840082575 %)
[2026-04-21 11:43:00] 2026-04-21 15:42:16,625 | INFO     | sum of square deviations: 3168223794.479275
[2026-04-21 11:43:00] 2026-04-21 15:42:16,626 | INFO     | sum of deviations: 107436007.25806046
[2026-04-21 11:43:00] 2026-04-21 15:42:16,626 | INFO     | mean x (centered): 0.0
[2026-04-21 11:43:00] 2026-04-21 15:42:16,626 | INFO     | mean y: 2568015.64516129
[2026-04-21 11:43:00] 2026-04-21 15:42:16,626 | INFO     | intersect: 2568015.64516129
[2026-04-21 11:43:00] 2026-04-21 15:42:16,627 | INFO     | chi2: 0.7511976809648447
[2026-04-21 11:43:00] 2026-04-21 15:42:16,627 | INFO     | current chi2=0.7511976809648447 (change=36.84711295630262 %)
[2026-04-21 11:43:00] 2026-04-21 15:42:16,627 | INFO     | sum of square deviations: 2954197364.2783036
[2026-04-21 11:43:00] 2026-04-21 15:42:16,628 | INFO     | sum of deviations: -1291963788.6132088
[2026-04-21 11:43:00] 2026-04-21 15:42:16,628 | INFO     | mean x (centered): 0.0
[2026-04-21 11:43:00] 2026-04-21 15:42:16,629 | INFO     | mean y: 2568997.6886792453
[2026-04-21 11:43:00] 2026-04-21 15:42:16,629 | INFO     | intersect: 2568997.6886792453
[2026-04-21 11:43:00] 2026-04-21 15:42:16,629 | INFO     | chi2: 0.7481961660625414
[2026-04-21 11:43:00] 2026-04-21 15:42:16,629 | INFO     | current chi2=0.7481961660625414 (change=0.3995639201718794 %)
[2026-04-21 11:43:00] 2026-04-21 15:42:16,629 | INFO     | left removable region: 20
[2026-04-21 11:43:00] 2026-04-21 15:42:16,630 | INFO     | sum of square deviations: 2710392716.5242686
[2026-04-21 11:43:00] 2026-04-21 15:42:16,631 | INFO     | sum of deviations: 11939314091.91262
[2026-04-21 11:43:00] 2026-04-21 15:42:16,631 | INFO     | mean x (centered): 0.0
[2026-04-21 11:43:00] 2026-04-21 15:42:16,631 | INFO     | mean y: 2578683.5485436893
[2026-04-21 11:43:00] 2026-04-21 15:42:16,631 | INFO     | intersect: 2578683.5485436893
[2026-04-21 11:43:00] 2026-04-21 15:42:16,631 | INFO     | chi2: 0.044155003819166934
[2026-04-21 11:43:00] 2026-04-21 15:42:16,631 | INFO     | current memory leak: 4.41 B/s (using 206 data points, chi2=0.04)
[2026-04-21 11:43:00] 2026-04-21 15:42:16,632 | INFO     | could have reported an average CPU frequency of 2628 MHz (11 samples)
[2026-04-21 11:43:00] 2026-04-21 15:42:16,632 | INFO     | ..............................
[2026-04-21 11:43:00] 2026-04-21 15:42:16,632 | INFO     | . Timing measurements:
[2026-04-21 11:43:00] 2026-04-21 15:42:16,632 | INFO     | . get job = 1 s
[2026-04-21 11:43:00] 2026-04-21 15:42:16,632 | INFO     | . initial setup = 60 s
[2026-04-21 11:43:00] 2026-04-21 15:42:16,633 | INFO     | . payload setup = 259 s
[2026-04-21 11:43:00] 2026-04-21 15:42:16,633 | INFO     | . stage-in = 0 s
[2026-04-21 11:43:00] 2026-04-21 15:42:16,633 | INFO     | . payload execution = 14164 s
[2026-04-21 11:43:00] 2026-04-21 15:42:16,633 | INFO     | . stage-out = 2 s
[2026-04-21 11:43:00] 2026-04-21 15:42:16,633 | INFO     | . log creation = 0 s
[2026-04-21 11:43:00] 2026-04-21 15:42:16,633 | INFO     | ..............................
[2026-04-21 11:43:00] 2026-04-21 15:42:16,821 | INFO     | 
[2026-04-21 11:43:00] 2026-04-21 15:42:16,821 | INFO     | job summary report
[2026-04-21 11:43:00] 2026-04-21 15:42:16,821 | INFO     | --------------------------------------------------
[2026-04-21 11:43:00] 2026-04-21 15:42:16,821 | INFO     | PanDA job id: 7105309058
[2026-04-21 11:43:00] 2026-04-21 15:42:16,821 | INFO     | task id: 49820244
[2026-04-21 11:43:00] 2026-04-21 15:42:16,821 | INFO     | errors: (none)
[2026-04-21 11:43:00] 2026-04-21 15:42:16,821 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-21 11:43:00] 2026-04-21 15:42:16,822 | INFO     | pilot state: finished 
[2026-04-21 11:43:00] 2026-04-21 15:42:16,822 | INFO     | transexitcode: 0
[2026-04-21 11:43:00] 2026-04-21 15:42:16,822 | INFO     | exeerrorcode: 0
[2026-04-21 11:43:00] 2026-04-21 15:42:16,822 | INFO     | exeerrordiag: 
[2026-04-21 11:43:00] 2026-04-21 15:42:16,822 | INFO     | exitcode: 0
[2026-04-21 11:43:00] 2026-04-21 15:42:16,822 | INFO     | exitmsg: OK
[2026-04-21 11:43:00] 2026-04-21 15:42:16,822 | INFO     | cpuconsumptiontime: 72662 s
[2026-04-21 11:43:00] 2026-04-21 15:42:16,822 | INFO     | nevents: 400
[2026-04-21 11:43:00] 2026-04-21 15:42:16,822 | INFO     | neventsw: 0
[2026-04-21 11:43:00] 2026-04-21 15:42:16,822 | INFO     | pid: 3626145
[2026-04-21 11:43:00] 2026-04-21 15:42:16,822 | INFO     | pgrp: 3626145
[2026-04-21 11:43:00] 2026-04-21 15:42:16,822 | INFO     | corecount: 8
[2026-04-21 11:43:00] 2026-04-21 15:42:16,822 | INFO     | event service: False
[2026-04-21 11:43:00] 2026-04-21 15:42:16,822 | INFO     | sizes: {0: 2281500, 1: 2281811, 2: 2283413, 13: 2283413, 14429: 2314118, 14432: 2316138, 14434: 2316516}
[2026-04-21 11:43:00] 2026-04-21 15:42:16,822 | INFO     | --------------------------------------------------
[2026-04-21 11:43:00] 2026-04-21 15:42:16,823 | INFO     | 
[2026-04-21 11:43:00] 2026-04-21 15:42:16,823 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2026-04-21 11:43:00] 2026-04-21 15:42:16,984 | WARNING  | process 3626145 can no longer be monitored (due to stat problems) - aborting
[2026-04-21 11:43:00] 2026-04-21 15:42:16,984 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-7105309058/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 11:43:00] 2026-04-21 15:42:16,985 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-7105309058/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 11:43:00] 2026-04-21 15:42:16,986 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-04-21 11:43:00] 2026-04-21 15:42:16,986 | WARNING  | maxPSS not found in memory monitor output
[2026-04-21 11:43:00] 2026-04-21 15:42:16,986 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 9390951 B
[2026-04-21 11:43:00] 2026-04-21 15:42:16,987 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15592 B
[2026-04-21 11:43:00] 2026-04-21 15:42:16,987 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2026-04-21 11:43:00] 2026-04-21 15:42:17,030 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-21 11:43:00] 2026-04-21 15:42:17,030 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-21 11:43:00] 2026-04-21 15:42:17,030 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-21 11:43:00] 2026-04-21 15:42:17,030 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-21 11:43:00] 2026-04-21 15:42:17,031 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-21 11:43:00] 2026-04-21 15:42:17,031 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-21 11:43:00] 2026-04-21 15:42:17,031 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-21 11:43:00] 2026-04-21 15:42:17,031 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-21 11:43:00] 2026-04-21 15:42:17,031 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-21 11:43:00] 2026-04-21 15:42:17,031 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-21 11:43:00] 2026-04-21 15:42:17,031 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-21 11:43:00] 2026-04-21 15:42:17,031 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-21 11:43:00] 2026-04-21 15:42:17,031 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-21 11:43:00] 2026-04-21 15:42:17,031 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-21 11:43:00] 2026-04-21 15:42:17,031 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-21 11:43:00] 2026-04-21 15:42:17,031 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-21 11:43:00] 2026-04-21 15:42:17,032 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-21 11:43:00] 2026-04-21 15:42:17,032 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-21 11:43:00] 2026-04-21 15:42:17,032 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-21 11:43:00] 2026-04-21 15:42:17,032 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-21 11:43:00] 2026-04-21 15:42:17,032 | INFO     | job 7105309058 has completed (purged errors)
[2026-04-21 11:43:00] 2026-04-21 15:42:17,032 | INFO     | overall cleanup function is called
[2026-04-21 11:43:00] 2026-04-21 15:42:17,148 | INFO     | sufficient remaining disk space (67697115136 B)
[2026-04-21 11:43:00] 2026-04-21 15:42:17,148 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-04-21 11:43:00] 2026-04-21 15:42:17,148 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/7/PanDA_Pilot-7105309058/HITS.49820244._013880.pool.root.1 since it does not exist
[2026-04-21 11:43:00] 2026-04-21 15:42:17,778 | INFO     | number of running child processes to parent process 3626145: 1
[2026-04-21 11:43:00] 2026-04-21 15:42:17,778 | INFO     | maximum number of monitored processes: 7
[2026-04-21 11:43:00] 2026-04-21 15:42:17,778 | INFO     | aborting job monitoring since job object (job id=7105309058) has expired
[2026-04-21 11:43:00] 2026-04-21 15:42:18,042 | INFO     | --- collectZombieJob: --- 10, [3626145]
[2026-04-21 11:43:00] 2026-04-21 15:42:18,042 | INFO     | zombie collector waiting for pid 3626145
[2026-04-21 11:43:00] 2026-04-21 15:42:18,043 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-21 11:43:00] 2026-04-21 15:42:18,043 | INFO     | collected zombie processes
[2026-04-21 11:43:00] 2026-04-21 15:42:18,043 | INFO     | will attempt to kill all subprocesses of pid=3626145
[2026-04-21 11:43:00] 2026-04-21 15:42:18,635 | INFO     | process IDs to be killed: [3626145] (in reverse order)
[2026-04-21 11:43:00] 2026-04-21 15:42:18,852 | WARNING  | found no corresponding commands to process id(s)
[2026-04-21 11:43:00] 2026-04-21 15:42:18,852 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-21 11:43:00] 2026-04-21 15:42:18,880 | INFO     | did not find any defunct processes belonging to 3626145
[2026-04-21 11:43:00] 2026-04-21 15:42:18,925 | INFO     | did not find any defunct processes belonging to 3626145
[2026-04-21 11:43:00] 2026-04-21 15:42:18,925 | INFO     | Ready for new job
[2026-04-21 11:43:00] 2026-04-21 15:42:18,927 | INFO     | **************************************
[2026-04-21 11:43:00] 2026-04-21 15:42:18,927 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-21 11:43:00] 2026-04-21 15:42:18,927 | INFO     | **************************************
[2026-04-21 11:43:00] 2026-04-21 15:42:18,927 | INFO     | 
[2026-04-21 11:43:00] 2026-04-21 15:42:18,933 | INFO     | architecture information:
[2026-04-21 11:43:00] 2026-04-21 15:42:18,934 | INFO     | executing command: cat /etc/os-release
[2026-04-21 11:43:00] 2026-04-21 15:42:18,987 | INFO     | cat /etc/os-release:
[2026-04-21 11:43:00] NAME="CentOS Linux"
[2026-04-21 11:43:00] VERSION="7 (Core)"
[2026-04-21 11:43:00] ID="centos"
[2026-04-21 11:43:00] ID_LIKE="rhel fedora"
[2026-04-21 11:43:00] VERSION_ID="7"
[2026-04-21 11:43:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-21 11:43:00] ANSI_COLOR="0;31"
[2026-04-21 11:43:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-21 11:43:00] HOME_URL="https://www.centos.org/"
[2026-04-21 11:43:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-21 11:43:00] 
[2026-04-21 11:43:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-21 11:43:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-21 11:43:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-21 11:43:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-21 11:43:00] 
[2026-04-21 11:43:00] 2026-04-21 15:42:18,988 | INFO     | **************************************
[2026-04-21 11:43:00] 2026-04-21 15:42:19,491 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2026-04-21 11:43:00] 2026-04-21 15:42:19,565 | INFO     | sufficient remaining disk space (67698163712 B)
[2026-04-21 11:43:00] 2026-04-21 15:42:19,565 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-21 11:43:00] 2026-04-21 15:42:19,565 | INFO     | current server update state: UPDATING_FINAL
[2026-04-21 11:43:00] 2026-04-21 15:42:19,565 | INFO     | update_server=False
[2026-04-21 11:43:00] 2026-04-21 15:42:19,566 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-21 11:43:00] 2026-04-21 15:42:19,566 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-21 11:43:00] 2026-04-21 15:42:19,566 | INFO     | aborting loop
[2026-04-21 11:43:00] 2026-04-21 15:42:19,901 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-21 11:43:00] 2026-04-21 15:42:20,119 | INFO     | all data control threads have been joined
[2026-04-21 11:43:00] 2026-04-21 15:42:20,571 | INFO     | [job] retrieve thread has finished
[2026-04-21 11:43:00] 2026-04-21 15:42:20,572 | INFO     | [job] job monitor thread has finished
[2026-04-21 11:43:00] 2026-04-21 15:42:20,740 | INFO     | [payload] validate_pre thread has finished
[2026-04-21 11:43:00] 2026-04-21 15:42:20,914 | INFO     | all payload control threads have been joined
[2026-04-21 11:43:00] 2026-04-21 15:42:20,978 | INFO     | [payload] execute_payloads thread has finished
[2026-04-21 11:43:00] 2026-04-21 15:42:21,082 | INFO     | all job control threads have been joined
[2026-04-21 11:43:00] 2026-04-21 15:42:21,125 | INFO     | [data] control thread has finished
[2026-04-21 11:43:00] 2026-04-21 15:42:21,505 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-21 11:43:00] 2026-04-21 15:42:21,594 | INFO     | [job] validate thread has finished
[2026-04-21 11:43:00] 2026-04-21 15:42:21,612 | INFO     | [data] copytool_in thread has finished
[2026-04-21 11:43:00] 2026-04-21 15:42:21,622 | INFO     | [job] create_data_payload thread has finished
[2026-04-21 11:43:00] 2026-04-21 15:42:21,670 | INFO     | [payload] failed_post thread has finished
[2026-04-21 11:43:00] 2026-04-21 15:42:21,833 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-21 11:43:00] 2026-04-21 15:42:21,908 | INFO     | [data] copytool_out thread has finished
[2026-04-21 11:43:00] 2026-04-21 15:42:21,920 | INFO     | [payload] control thread has finished
[2026-04-21 11:43:00] 2026-04-21 15:42:21,982 | INFO     | [payload] validate_post thread has finished
[2026-04-21 11:43:00] 2026-04-21 15:42:22,090 | INFO     | [job] control thread has finished
[2026-04-21 11:43:00] 2026-04-21 15:42:22,500 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-21 11:43:00] 2026-04-21 15:42:22,839 | INFO     | [job] queue monitor thread has finished
[2026-04-21 11:43:00] 2026-04-21 15:42:26,509 | INFO     | [data] queue_monitor thread has finished
[2026-04-21 11:43:00] 2026-04-21 15:42:49,483 | INFO     | PID=3569847 has CPU usage=8.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-21 11:43:00] 2026-04-21 15:42:49,487 | INFO     | .. there are 49 such processes running
[2026-04-21 11:43:00] 2026-04-21 15:42:49,488 | INFO     | found 0 job(s) in 20 queues
[2026-04-21 11:43:00] 2026-04-21 15:42:49,489 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-21 11:43:00] 2026-04-21 15:42:49,489 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-21 11:43:00] 2026-04-21 15:42:53,078 | INFO     | [monitor] cgroup control has ended
[2026-04-21 11:43:00] 2026-04-21 15:42:54,603 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140368758363968)>', '<ExcThread(monitor, started 140368305706752)>']
[2026-04-21 11:43:00] 2026-04-21 15:42:55,528 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-21 11:43:00] 2026-04-21 15:42:55,528 | INFO     | [monitor] control thread has ended
[2026-04-21 11:43:00] 2026-04-21 15:42:59,629 | INFO     | all workflow threads have been joined
[2026-04-21 11:43:00] 2026-04-21 15:42:59,629 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-21 11:43:00] 2026-04-21 15:42:59,630 | INFO     | traces error code: 0
[2026-04-21 11:43:00] 2026-04-21 15:42:59,630 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-21 11:43:00] 2026-04-21 15:42:59,873 [wrapper] ==== pilot stdout END ====
[2026-04-21 11:43:00] 2026-04-21 15:42:59,881 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-21 11:43:00] 2026-04-21 15:42:59,885 [wrapper] pilotpid: 3569847
[2026-04-21 11:43:00] 2026-04-21 15:42:59,899 [wrapper] Pilot exit status: 0
[2026-04-21 11:43:00] 2026-04-21 15:42:59,969 [wrapper] pandaids: 7105309058
[2026-04-21 11:43:00] 2026-04-21 15:43:00,146 [wrapper] cleanup supervisor_pilot 2144182 3569848
[2026-04-21 11:43:00] 2026-04-21 15:43:00,151 [wrapper] Test setup, not cleaning
[2026-04-21 11:43:00] 2026-04-21 15:43:00,159 [wrapper] apfmon messages muted
[2026-04-21 11:43:00] 2026-04-21 15:43:00,166 [wrapper] ==== wrapper stdout END ====
[2026-04-21 11:43:00] 2026-04-21 15:43:00,184 [wrapper] ==== wrapper stderr END ====
[2026-04-21 11:43:00]  *** Error codes and diagnostics ***
[2026-04-21 11:43:00]     "exeErrorCode": 0,
[2026-04-21 11:43:00]     "pilotErrorCode": 0,
[2026-04-21 11:43:00]  *** Listing of results directory ***
[2026-04-21 11:43:00] total 2474184
[2026-04-21 11:43:00] -rw-r--r--. 1 boincer umatlas     644190 Apr 21 06:54 pilot3.tar.gz
[2026-04-21 11:43:00] -rwx------. 1 boincer umatlas      36322 Apr 21 07:04 runpilot2-wrapper.sh
[2026-04-21 11:43:00] -rw-r--r--. 1 boincer umatlas       5094 Apr 21 07:04 queuedata.json
[2026-04-21 11:43:00] -rw-r--r--. 1 boincer umatlas        100 Apr 21 07:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-21 11:43:00] -rwxr-xr-x. 1 boincer umatlas       7986 Apr 21 07:37 run_atlas
[2026-04-21 11:43:00] -rw-r--r--. 1 boincer umatlas        105 Apr 21 07:37 job.xml
[2026-04-21 11:43:00] -rw-r--r--. 2 boincer umatlas 2251800021 Apr 21 07:38 EVNT.49820242._000028.pool.root.1
[2026-04-21 11:43:00] drwxrwx--x. 2 boincer umatlas       4096 Apr 21 07:38 shared
[2026-04-21 11:43:00] -rw-r--r--. 2 boincer umatlas     656921 Apr 21 07:38 input.tar.gz
[2026-04-21 11:43:00] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 07:38 start_atlas.sh
[2026-04-21 11:43:00] -rw-r--r--. 1 boincer umatlas          0 Apr 21 07:38 boinc_lockfile
[2026-04-21 11:43:00] -rw-r--r--. 1 boincer umatlas       2551 Apr 21 07:38 pandaJob.out
[2026-04-21 11:43:00] -rw-------. 1 boincer umatlas         57 Apr 21 07:38 setup.sh.local
[2026-04-21 11:43:00] -rw-------. 1 boincer umatlas     995866 Apr 21 07:40 agis_schedconf.cvmfs.json
[2026-04-21 11:43:00] -rw-------. 1 boincer umatlas        442 Apr 21 07:41 workernode_map.json
[2026-04-21 11:43:00] drwx------. 5 boincer umatlas       4096 Apr 21 07:41 pilot3
[2026-04-21 11:43:00] -rw-r--r--. 1 boincer umatlas       6779 Apr 21 11:38 init_data.xml
[2026-04-21 11:43:00] -rw-------. 1 boincer umatlas  274182071 Apr 21 11:41 HITS.49820244._013880.pool.root.1
[2026-04-21 11:43:00] -rw-r--r--. 1 boincer umatlas        490 Apr 21 11:41 boinc_task_state.xml
[2026-04-21 11:43:00] -rw-------. 1 boincer umatlas       1044 Apr 21 11:42 memory_monitor_summary.json
[2026-04-21 11:43:00] -rw-------. 1 boincer umatlas    1509089 Apr 21 11:42 agis_ddmendpoints.agis.ALL.json
[2026-04-21 11:43:00] -rw-------. 1 boincer umatlas     558789 Apr 21 11:42 log.49820244._013880.job.log.tgz.1
[2026-04-21 11:43:00] -rw-------. 1 boincer umatlas       6414 Apr 21 11:42 heartbeat_new.json
[2026-04-21 11:43:00] -rw-------. 1 boincer umatlas       6305 Apr 21 11:42 heartbeat.json
[2026-04-21 11:43:00] -rw-------. 1 boincer umatlas         95 Apr 21 11:42 pilot_heartbeat.json
[2026-04-21 11:43:00] -rw-r--r--. 1 boincer umatlas       8192 Apr 21 11:42 boinc_mmap_file
[2026-04-21 11:43:00] -rw-r--r--. 1 boincer umatlas         28 Apr 21 11:42 wrapper_checkpoint.txt
[2026-04-21 11:43:00] -rw-------. 1 boincer umatlas       4819 Apr 21 11:42 pilotlog.txt
[2026-04-21 11:43:00] -rw-------. 1 boincer umatlas    1201637 Apr 21 11:43 log.49820244._013880.job.log.1
[2026-04-21 11:43:00] -rw-------. 1 boincer umatlas        357 Apr 21 11:43 output.list
[2026-04-21 11:43:00] -rw-r--r--. 1 boincer umatlas        410 Apr 21 11:43 runtime_log
[2026-04-21 11:43:00] -rw-------. 1 boincer umatlas    1781760 Apr 21 11:43 result.tar.gz
[2026-04-21 11:43:00] -rw-r--r--. 1 boincer umatlas       8964 Apr 21 11:43 runtime_log.err
[2026-04-21 11:43:00] -rw-------. 1 boincer umatlas        657 Apr 21 11:43 59b14039f365.diag
[2026-04-21 11:43:00] -rw-r--r--. 1 boincer umatlas      21419 Apr 21 11:43 stderr.txt
[2026-04-21 11:43:00] HITS file was successfully produced:
[2026-04-21 11:43:00] -rw-------. 1 boincer umatlas 274182071 Apr 21 11:41 shared/HITS.pool.root.1
[2026-04-21 11:43:00]  *** Contents of shared directory: ***
[2026-04-21 11:43:00] total 2469188
[2026-04-21 11:43:00] -rw-r--r--. 2 boincer umatlas 2251800021 Apr 21 07:38 ATLAS.root_0
[2026-04-21 11:43:00] -rw-r--r--. 2 boincer umatlas     656921 Apr 21 07:38 input.tar.gz
[2026-04-21 11:43:00] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 07:38 start_atlas.sh
[2026-04-21 11:43:00] -rw-------. 1 boincer umatlas  274182071 Apr 21 11:41 HITS.pool.root.1
[2026-04-21 11:43:00] -rw-------. 1 boincer umatlas    1781760 Apr 21 11:43 result.tar.gz
11:43:02 (3550580): run_atlas exited; CPU time 73604.519120
11:43:02 (3550580): called boinc_finish(0)

</stderr_txt>
]]>

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