Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:44:19 (1284811): wrapper (7.7.26015): starting
17:44:19 (1284811): wrapper: running run_atlas (--nthreads 4)
[2026-04-21 17:44:19] Arguments: --nthreads 4
[2026-04-21 17:44:19] Threads: 4
[2026-04-21 17:44:19] Checking for CVMFS
[2026-04-21 17:44:19] No cvmfs_config command found, will try listing directly
[2026-04-21 17:44:19] CVMFS is ok
[2026-04-21 17:44:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 17:44:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 17:44:19] Further information can be found at the LHC@home message board.
[2026-04-21 17:44:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 17:44:19] Checking for apptainer binary...
[2026-04-21 17:44:19] which: no apptainer in ((null))
[2026-04-21 17:44:19] apptainer is not installed, using version from CVMFS
[2026-04-21 17:44:19] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 17:44:19] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot68/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-04-21 17:44:19] apptainer works
[2026-04-21 17:44:19] Set ATHENA_PROC_NUMBER=4
[2026-04-21 17:44:19] Set ATHENA_CORE_NUMBER=4
[2026-04-21 17:44:19] Starting ATLAS job with PandaID=7105079208
[2026-04-21 17:44:19] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot68/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-21 21:02:24]  *** The last 200 lines of the pilot log: ***
[2026-04-21 21:02:24] 2026-04-21 19:01:22,750 | INFO     | job 7105079208 has state=finished
[2026-04-21 21:02:24] 2026-04-21 19:01:22,751 | INFO     | preparing for final server update for job 7105079208 in state='finished'
[2026-04-21 21:02:24] 2026-04-21 19:01:22,751 | INFO     | reading metadata from: /var/lib/boinc/var/slot68/slots/0/PanDA_Pilot-7105079208/jobReport.json
[2026-04-21 21:02:24] 2026-04-21 19:01:22,753 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot68/slots/0/workernode_map.json
[2026-04-21 21:02:24] 2026-04-21 19:01:22,753 | INFO     | this job has now completed (state=finished)
[2026-04-21 21:02:24] 2026-04-21 19:01:22,754 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-21 21:02:24] 2026-04-21 19:01:22,754 | INFO     | log transfer has been attempted: DONE
[2026-04-21 21:02:24] 2026-04-21 19:01:22,754 | INFO     | job 7105079208 has finished - writing final server update
[2026-04-21 21:02:24] 2026-04-21 19:01:22,754 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_9000/.job.ad'
[2026-04-21 21:02:24] 2026-04-21 19:01:22,754 | INFO     | total number of processed events: 400 (read)
[2026-04-21 21:02:24] 2026-04-21 19:01:22,777 | INFO     | using path: /var/lib/boinc/var/slot68/slots/0/PanDA_Pilot-7105079208/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 21:02:24] 2026-04-21 19:01:22,777 | INFO     | extracted standard info from prmon json
[2026-04-21 21:02:24] 2026-04-21 19:01:22,778 | INFO     | extracted standard memory fields from prmon json
[2026-04-21 21:02:24] 2026-04-21 19:01:22,778 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-21 21:02:24] 2026-04-21 19:01:22,778 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-21 21:02:24] 2026-04-21 19:01:22,781 | INFO     | fitting pss+swap vs Time
[2026-04-21 21:02:24] 2026-04-21 19:01:22,782 | INFO     | sum of square deviations: 2229146912.0
[2026-04-21 21:02:24] 2026-04-21 19:01:22,783 | INFO     | sum of deviations: -10406079548.000004
[2026-04-21 21:02:24] 2026-04-21 19:01:22,783 | INFO     | mean x (centered): 0.0
[2026-04-21 21:02:24] 2026-04-21 19:01:22,783 | INFO     | mean y: 2392300.9844559585
[2026-04-21 21:02:24] 2026-04-21 19:01:22,783 | INFO     | intersect: 2392300.9844559585
[2026-04-21 21:02:24] 2026-04-21 19:01:22,784 | INFO     | chi2: 1.4293202775331775
[2026-04-21 21:02:24] 2026-04-21 19:01:22,784 | INFO     | sum of square deviations: 2060343747.0
[2026-04-21 21:02:24] 2026-04-21 19:01:22,785 | INFO     | sum of deviations: -10080668551.499994
[2026-04-21 21:02:24] 2026-04-21 19:01:22,785 | INFO     | mean x (centered): 0.0
[2026-04-21 21:02:24] 2026-04-21 19:01:22,785 | INFO     | mean y: 2392595.0478723403
[2026-04-21 21:02:24] 2026-04-21 19:01:22,785 | INFO     | intersect: 2392595.0478723403
[2026-04-21 21:02:24] 2026-04-21 19:01:22,786 | INFO     | chi2: 1.4281155858126513
[2026-04-21 21:02:24] 2026-04-21 19:01:22,786 | INFO     | current chi2=1.4281155858126513 (change=0.08428423912136172 %)
[2026-04-21 21:02:24] 2026-04-21 19:01:22,786 | INFO     | right removable region: 187
[2026-04-21 21:02:24] 2026-04-21 19:01:22,786 | INFO     | sum of square deviations: 2060343747.0
[2026-04-21 21:02:24] 2026-04-21 19:01:22,787 | INFO     | sum of deviations: -28284933077.500004
[2026-04-21 21:02:24] 2026-04-21 19:01:22,787 | INFO     | mean x (centered): 0.0
[2026-04-21 21:02:24] 2026-04-21 19:01:22,788 | INFO     | mean y: 2408120.675531915
[2026-04-21 21:02:24] 2026-04-21 19:01:22,788 | INFO     | intersect: 2408120.675531915
[2026-04-21 21:02:24] 2026-04-21 19:01:22,788 | INFO     | chi2: 0.26078484981092553
[2026-04-21 21:02:24] 2026-04-21 19:01:22,788 | INFO     | current chi2=0.26078484981092553 (change=81.75462463451463 %)
[2026-04-21 21:02:24] 2026-04-21 19:01:22,788 | INFO     | sum of square deviations: 1900284932.0
[2026-04-21 21:02:24] 2026-04-21 19:01:22,789 | INFO     | sum of deviations: -19341209915.0
[2026-04-21 21:02:24] 2026-04-21 19:01:22,789 | INFO     | mean x (centered): 0.0
[2026-04-21 21:02:24] 2026-04-21 19:01:22,790 | INFO     | mean y: 2399592.3224043716
[2026-04-21 21:02:24] 2026-04-21 19:01:22,790 | INFO     | intersect: 2399592.3224043716
[2026-04-21 21:02:24] 2026-04-21 19:01:22,790 | INFO     | chi2: 0.21340397818340803
[2026-04-21 21:02:24] 2026-04-21 19:01:22,790 | INFO     | current chi2=0.21340397818340803 (change=18.168567561294154 %)
[2026-04-21 21:02:24] 2026-04-21 19:01:22,790 | INFO     | left removable region: 10
[2026-04-21 21:02:24] 2026-04-21 19:01:22,790 | INFO     | sum of square deviations: 1719429448.0
[2026-04-21 21:02:24] 2026-04-21 19:01:22,792 | INFO     | sum of deviations: -18726380911.0
[2026-04-21 21:02:24] 2026-04-21 19:01:22,792 | INFO     | mean x (centered): 0.0
[2026-04-21 21:02:24] 2026-04-21 19:01:22,792 | INFO     | mean y: 2400214.694915254
[2026-04-21 21:02:24] 2026-04-21 19:01:22,792 | INFO     | intersect: 2400214.694915254
[2026-04-21 21:02:24] 2026-04-21 19:01:22,792 | INFO     | chi2: 0.21154199974426457
[2026-04-21 21:02:24] 2026-04-21 19:01:22,792 | INFO     | current memory leak: -10.89 B/s (using 177 data points, chi2=0.21)
[2026-04-21 21:02:24] 2026-04-21 19:01:22,793 | INFO     | could have reported an average CPU frequency of 2771 MHz (10 samples)
[2026-04-21 21:02:24] 2026-04-21 19:01:22,793 | INFO     | ..............................
[2026-04-21 21:02:24] 2026-04-21 19:01:22,793 | INFO     | . Timing measurements:
[2026-04-21 21:02:24] 2026-04-21 19:01:22,793 | INFO     | . get job = 0 s
[2026-04-21 21:02:24] 2026-04-21 19:01:22,793 | INFO     | . initial setup = 7 s
[2026-04-21 21:02:24] 2026-04-21 19:01:22,794 | INFO     | . payload setup = 12 s
[2026-04-21 21:02:24] 2026-04-21 19:01:22,794 | INFO     | . stage-in = 0 s
[2026-04-21 21:02:24] 2026-04-21 19:01:22,794 | INFO     | . payload execution = 11773 s
[2026-04-21 21:02:24] 2026-04-21 19:01:22,794 | INFO     | . stage-out = 0 s
[2026-04-21 21:02:24] 2026-04-21 19:01:22,794 | INFO     | . log creation = 0 s
[2026-04-21 21:02:24] 2026-04-21 19:01:22,794 | INFO     | ..............................
[2026-04-21 21:02:24] 2026-04-21 19:01:22,871 | INFO     | 
[2026-04-21 21:02:24] 2026-04-21 19:01:22,872 | INFO     | job summary report
[2026-04-21 21:02:24] 2026-04-21 19:01:22,872 | INFO     | --------------------------------------------------
[2026-04-21 21:02:24] 2026-04-21 19:01:22,872 | INFO     | PanDA job id: 7105079208
[2026-04-21 21:02:24] 2026-04-21 19:01:22,872 | INFO     | task id: 49820244
[2026-04-21 21:02:24] 2026-04-21 19:01:22,872 | INFO     | errors: (none)
[2026-04-21 21:02:24] 2026-04-21 19:01:22,872 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-21 21:02:24] 2026-04-21 19:01:22,872 | INFO     | pilot state: finished 
[2026-04-21 21:02:24] 2026-04-21 19:01:22,872 | INFO     | transexitcode: 0
[2026-04-21 21:02:24] 2026-04-21 19:01:22,872 | INFO     | exeerrorcode: 0
[2026-04-21 21:02:24] 2026-04-21 19:01:22,872 | INFO     | exeerrordiag: 
[2026-04-21 21:02:24] 2026-04-21 19:01:22,872 | INFO     | exitcode: 0
[2026-04-21 21:02:24] 2026-04-21 19:01:22,873 | INFO     | exitmsg: OK
[2026-04-21 21:02:24] 2026-04-21 19:01:22,873 | INFO     | cpuconsumptiontime: 45458 s
[2026-04-21 21:02:24] 2026-04-21 19:01:22,873 | INFO     | nevents: 400
[2026-04-21 21:02:24] 2026-04-21 19:01:22,873 | INFO     | neventsw: 0
[2026-04-21 21:02:24] 2026-04-21 19:01:22,873 | INFO     | pid: 1295232
[2026-04-21 21:02:24] 2026-04-21 19:01:22,873 | INFO     | pgrp: 1295232
[2026-04-21 21:02:24] 2026-04-21 19:01:22,873 | INFO     | corecount: 4
[2026-04-21 21:02:24] 2026-04-21 19:01:22,873 | INFO     | event service: False
[2026-04-21 21:02:24] 2026-04-21 19:01:22,873 | INFO     | sizes: {0: 2274531, 1: 2276416, 12: 2276416, 11789: 2306416, 11790: 2315492, 11791: 2315630}
[2026-04-21 21:02:24] 2026-04-21 19:01:22,873 | INFO     | --------------------------------------------------
[2026-04-21 21:02:24] 2026-04-21 19:01:22,873 | INFO     | 
[2026-04-21 21:02:24] 2026-04-21 19:01:22,873 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot68/slots/0
[2026-04-21 21:02:24] 2026-04-21 19:01:22,900 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-21 21:02:24] 2026-04-21 19:01:22,900 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-21 21:02:24] 2026-04-21 19:01:22,900 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-21 21:02:24] 2026-04-21 19:01:22,901 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-21 21:02:24] 2026-04-21 19:01:22,901 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-21 21:02:24] 2026-04-21 19:01:22,901 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-21 21:02:24] 2026-04-21 19:01:22,901 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-21 21:02:24] 2026-04-21 19:01:22,901 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-21 21:02:24] 2026-04-21 19:01:22,901 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-21 21:02:24] 2026-04-21 19:01:22,901 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-21 21:02:24] 2026-04-21 19:01:22,901 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-21 21:02:24] 2026-04-21 19:01:22,901 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-21 21:02:24] 2026-04-21 19:01:22,901 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-21 21:02:24] 2026-04-21 19:01:22,901 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-21 21:02:24] 2026-04-21 19:01:22,902 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-21 21:02:24] 2026-04-21 19:01:22,902 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-21 21:02:24] 2026-04-21 19:01:22,902 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-21 21:02:24] 2026-04-21 19:01:22,902 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-21 21:02:24] 2026-04-21 19:01:22,902 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-21 21:02:24] 2026-04-21 19:01:22,902 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-21 21:02:24] 2026-04-21 19:01:22,902 | INFO     | job 7105079208 has completed (purged errors)
[2026-04-21 21:02:24] 2026-04-21 19:01:22,902 | INFO     | overall cleanup function is called
[2026-04-21 21:02:24] 2026-04-21 19:01:23,911 | INFO     | --- collectZombieJob: --- 10, [1295232]
[2026-04-21 21:02:24] 2026-04-21 19:01:23,912 | INFO     | zombie collector waiting for pid 1295232
[2026-04-21 21:02:24] 2026-04-21 19:01:23,912 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-21 21:02:24] 2026-04-21 19:01:23,912 | INFO     | collected zombie processes
[2026-04-21 21:02:24] 2026-04-21 19:01:23,912 | INFO     | will attempt to kill all subprocesses of pid=1295232
[2026-04-21 21:02:24] 2026-04-21 19:01:24,618 | INFO     | process IDs to be killed: [1295232] (in reverse order)
[2026-04-21 21:02:24] 2026-04-21 19:01:24,847 | WARNING  | found no corresponding commands to process id(s)
[2026-04-21 21:02:24] 2026-04-21 19:01:24,847 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-21 21:02:24] 2026-04-21 19:01:24,876 | INFO     | did not find any defunct processes belonging to 1295232
[2026-04-21 21:02:24] 2026-04-21 19:01:24,898 | INFO     | did not find any defunct processes belonging to 1295232
[2026-04-21 21:02:24] 2026-04-21 19:01:24,899 | INFO     | Ready for new job
[2026-04-21 21:02:24] 2026-04-21 19:01:24,901 | INFO     | **************************************
[2026-04-21 21:02:24] 2026-04-21 19:01:24,901 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-21 21:02:24] 2026-04-21 19:01:24,901 | INFO     | **************************************
[2026-04-21 21:02:24] 2026-04-21 19:01:24,901 | INFO     | 
[2026-04-21 21:02:24] 2026-04-21 19:01:24,909 | INFO     | architecture information:
[2026-04-21 21:02:24] 2026-04-21 19:01:24,910 | INFO     | executing command: cat /etc/os-release
[2026-04-21 21:02:24] 2026-04-21 19:01:24,933 | INFO     | cat /etc/os-release:
[2026-04-21 21:02:24] NAME="CentOS Linux"
[2026-04-21 21:02:24] VERSION="7 (Core)"
[2026-04-21 21:02:24] ID="centos"
[2026-04-21 21:02:24] ID_LIKE="rhel fedora"
[2026-04-21 21:02:24] VERSION_ID="7"
[2026-04-21 21:02:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-21 21:02:24] ANSI_COLOR="0;31"
[2026-04-21 21:02:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-21 21:02:24] HOME_URL="https://www.centos.org/"
[2026-04-21 21:02:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-21 21:02:24] 
[2026-04-21 21:02:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-21 21:02:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-21 21:02:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-21 21:02:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-21 21:02:24] 
[2026-04-21 21:02:24] 2026-04-21 19:01:24,933 | INFO     | **************************************
[2026-04-21 21:02:24] 2026-04-21 19:01:25,437 | INFO     | executing command: df -mP /var/lib/boinc/var/slot68/slots/0
[2026-04-21 21:02:24] 2026-04-21 19:01:25,457 | INFO     | sufficient remaining disk space (144292446208 B)
[2026-04-21 21:02:24] 2026-04-21 19:01:25,458 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-21 21:02:24] 2026-04-21 19:01:25,458 | INFO     | current server update state: UPDATING_FINAL
[2026-04-21 21:02:24] 2026-04-21 19:01:25,458 | INFO     | update_server=False
[2026-04-21 21:02:24] 2026-04-21 19:01:25,458 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-21 21:02:24] 2026-04-21 19:01:25,458 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-21 21:02:24] 2026-04-21 19:01:25,766 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-21 21:02:24] 2026-04-21 19:01:25,766 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-21 21:02:24] 2026-04-21 19:01:25,767 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-21 21:02:24] 2026-04-21 19:01:25,767 | INFO     | will abort loop
[2026-04-21 21:02:24] 2026-04-21 19:01:26,107 | INFO     | all data control threads have been joined
[2026-04-21 21:02:24] 2026-04-21 19:01:26,114 | INFO     | all job control threads have been joined
[2026-04-21 21:02:24] 2026-04-21 19:01:26,463 | INFO     | [job] retrieve thread has finished
[2026-04-21 21:02:24] 2026-04-21 19:01:26,480 | INFO     | [payload] validate_post thread has finished
[2026-04-21 21:02:24] 2026-04-21 19:01:26,556 | INFO     | [payload] validate_pre thread has finished
[2026-04-21 21:02:24] 2026-04-21 19:01:26,609 | INFO     | all payload control threads have been joined
[2026-04-21 21:02:24] 2026-04-21 19:01:26,611 | INFO     | [payload] failed_post thread has finished
[2026-04-21 21:02:24] 2026-04-21 19:01:26,772 | INFO     | [job] job monitor thread has finished
[2026-04-21 21:02:24] 2026-04-21 19:01:26,867 | INFO     | [data] copytool_in thread has finished
[2026-04-21 21:02:24] 2026-04-21 19:01:27,113 | INFO     | [data] control thread has finished
[2026-04-21 21:02:24] 2026-04-21 19:01:27,119 | INFO     | [job] control thread has finished
[2026-04-21 21:02:24] 2026-04-21 19:01:27,463 | INFO     | [data] copytool_out thread has finished
[2026-04-21 21:02:24] 2026-04-21 19:01:27,500 | INFO     | [job] validate thread has finished
[2026-04-21 21:02:24] 2026-04-21 19:01:27,590 | INFO     | [payload] execute_payloads thread has finished
[2026-04-21 21:02:24] 2026-04-21 19:01:27,615 | INFO     | [payload] control thread has finished
[2026-04-21 21:02:24] 2026-04-21 19:01:27,683 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-21 21:02:24] 2026-04-21 19:01:27,881 | INFO     | [job] create_data_payload thread has finished
[2026-04-21 21:02:24] 2026-04-21 19:01:27,882 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-21 21:02:24] 2026-04-21 19:01:28,888 | INFO     | [job] queue monitor thread has finished
[2026-04-21 21:02:24] 2026-04-21 19:01:31,689 | INFO     | [data] queue_monitor thread has finished
[2026-04-21 21:02:24] 2026-04-21 19:01:36,083 | INFO     | job.realtimelogging is not enabled
[2026-04-21 21:02:24] 2026-04-21 19:01:37,088 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-21 21:02:24] 2026-04-21 19:01:56,621 | INFO     | PID=1289241 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-21 21:02:24] 2026-04-21 19:01:56,622 | INFO     | .. there are 9 such processes running
[2026-04-21 21:02:24] 2026-04-21 19:01:56,622 | INFO     | found 0 job(s) in 20 queues
[2026-04-21 21:02:24] 2026-04-21 19:01:56,622 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-21 21:02:24] 2026-04-21 19:01:56,622 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-21 21:02:24] 2026-04-21 19:01:57,077 | INFO     | [monitor] cgroup control has ended
[2026-04-21 21:02:24] 2026-04-21 19:01:58,973 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23226529052480)>', '<ExcThread(monitor, started 23226280568576)>']
[2026-04-21 21:02:24] 2026-04-21 19:01:59,638 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-21 21:02:24] 2026-04-21 19:01:59,638 | INFO     | [monitor] control thread has ended
[2026-04-21 21:02:24] 2026-04-21 19:02:03,990 | INFO     | all workflow threads have been joined
[2026-04-21 21:02:24] 2026-04-21 19:02:03,991 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-21 21:02:24] 2026-04-21 19:02:03,991 | INFO     | traces error code: 0
[2026-04-21 21:02:24] 2026-04-21 19:02:03,991 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-21 21:02:24] 2026-04-21 19:02:04,125 [wrapper] ==== pilot stdout END ====
[2026-04-21 21:02:24] 2026-04-21 19:02:04,129 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-21 21:02:24] 2026-04-21 19:02:04,131 [wrapper] pilotpid: 1289241
[2026-04-21 21:02:24] 2026-04-21 19:02:04,133 [wrapper] Pilot exit status: 0
[2026-04-21 21:02:24] 2026-04-21 19:02:04,148 [wrapper] pandaids: 7105079208
[2026-04-21 21:02:24] 2026-04-21 19:02:04,338 [wrapper] cleanup supervisor_pilot 1567803 1289242
[2026-04-21 21:02:24] 2026-04-21 19:02:04,342 [wrapper] Test setup, not cleaning
[2026-04-21 21:02:24] 2026-04-21 19:02:04,345 [wrapper] apfmon messages muted
[2026-04-21 21:02:24] 2026-04-21 19:02:04,349 [wrapper] ==== wrapper stdout END ====
[2026-04-21 21:02:24] 2026-04-21 19:02:04,351 [wrapper] ==== wrapper stderr END ====
[2026-04-21 21:02:24]  *** Error codes and diagnostics ***
[2026-04-21 21:02:24]     "exeErrorCode": 0,
[2026-04-21 21:02:24]     "pilotErrorCode": 0,
[2026-04-21 21:02:24]  *** Listing of results directory ***
[2026-04-21 21:02:24] total 2467368
[2026-04-21 21:02:24] -rw-r--r--. 1 boinc boinc     644190 Apr 21 09:41 pilot3.tar.gz
[2026-04-21 21:02:24] -rwx------. 1 boinc boinc      36322 Apr 21 09:42 runpilot2-wrapper.sh
[2026-04-21 21:02:24] -rw-r--r--. 1 boinc boinc       5094 Apr 21 11:22 queuedata.json
[2026-04-21 21:02:24] -rw-r--r--. 1 boinc boinc        100 Apr 21 17:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-21 21:02:24] -rwxr-xr-x. 1 boinc boinc       7986 Apr 21 17:44 run_atlas
[2026-04-21 21:02:24] -rw-r--r--. 1 boinc boinc        105 Apr 21 17:44 job.xml
[2026-04-21 21:02:24] -rw-r--r--. 2 boinc boinc 2247877740 Apr 21 17:44 EVNT.49820242._000024.pool.root.1
[2026-04-21 21:02:24] -rw-r--r--. 1 boinc boinc       6538 Apr 21 17:44 init_data.xml
[2026-04-21 21:02:24] -rw-r--r--. 2 boinc boinc     656921 Apr 21 17:44 input.tar.gz
[2026-04-21 21:02:24] -rw-r--r--. 2 boinc boinc      15665 Apr 21 17:44 start_atlas.sh
[2026-04-21 21:02:24] drwxrwx--x. 2 boinc boinc       4096 Apr 21 17:44 shared
[2026-04-21 21:02:24] -rw-r--r--. 1 boinc boinc          0 Apr 21 17:44 boinc_lockfile
[2026-04-21 21:02:24] -rw-r--r--. 1 boinc boinc       2550 Apr 21 17:44 pandaJob.out
[2026-04-21 21:02:24] -rw-------. 1 boinc boinc     992633 Apr 21 17:44 agis_schedconf.cvmfs.json
[2026-04-21 21:02:24] -rw-------. 1 boinc boinc        443 Apr 21 17:44 workernode_map.json
[2026-04-21 21:02:24] drwx------. 5 boinc boinc       4096 Apr 21 17:44 pilot3
[2026-04-21 21:02:24] -rw-------. 1 boinc boinc  271840133 Apr 21 21:00 HITS.49820244._012951.pool.root.1
[2026-04-21 21:02:24] -rw-r--r--. 1 boinc boinc        488 Apr 21 21:00 boinc_task_state.xml
[2026-04-21 21:02:24] -rw-------. 1 boinc boinc         95 Apr 21 21:00 pilot_heartbeat.json
[2026-04-21 21:02:24] -rw-------. 1 boinc boinc       1033 Apr 21 21:01 memory_monitor_summary.json
[2026-04-21 21:02:24] -rw-------. 1 boinc boinc    1509089 Apr 21 21:01 agis_ddmendpoints.agis.ALL.json
[2026-04-21 21:02:24] -rw-------. 1 boinc boinc     310107 Apr 21 21:01 log.49820244._012951.job.log.tgz.1
[2026-04-21 21:02:24] -rw-------. 1 boinc boinc       6374 Apr 21 21:01 heartbeat_new.json
[2026-04-21 21:02:24] -rw-------. 1 boinc boinc       6265 Apr 21 21:01 heartbeat.json
[2026-04-21 21:02:24] -rw-------. 1 boinc boinc       5086 Apr 21 21:02 pilotlog.txt
[2026-04-21 21:02:24] -rw-------. 1 boinc boinc    1095684 Apr 21 21:02 log.49820244._012951.job.log.1
[2026-04-21 21:02:24] -rw-------. 1 boinc boinc        357 Apr 21 21:02 output.list
[2026-04-21 21:02:24] -rw-r--r--. 1 boinc boinc        410 Apr 21 21:02 runtime_log
[2026-04-21 21:02:24] -rw-------. 1 boinc boinc    1423360 Apr 21 21:02 result.tar.gz
[2026-04-21 21:02:24] -rw-r--r--. 1 boinc boinc       8827 Apr 21 21:02 runtime_log.err
[2026-04-21 21:02:24] -rw-------. 1 boinc boinc        665 Apr 21 21:02 2a5e62dfe38a.diag
[2026-04-21 21:02:24] -rw-r--r--. 1 boinc boinc         27 Apr 21 21:02 wrapper_checkpoint.txt
[2026-04-21 21:02:24] -rw-r--r--. 1 boinc boinc       8192 Apr 21 21:02 boinc_mmap_file
[2026-04-21 21:02:24] -rw-r--r--. 1 boinc boinc      21021 Apr 21 21:02 stderr.txt
[2026-04-21 21:02:24] HITS file was successfully produced:
[2026-04-21 21:02:24] -rw-------. 1 boinc boinc 271840133 Apr 21 21:00 shared/HITS.pool.root.1
[2026-04-21 21:02:24]  *** Contents of shared directory: ***
[2026-04-21 21:02:24] total 2462728
[2026-04-21 21:02:24] -rw-r--r--. 2 boinc boinc 2247877740 Apr 21 17:44 ATLAS.root_0
[2026-04-21 21:02:24] -rw-r--r--. 2 boinc boinc     656921 Apr 21 17:44 input.tar.gz
[2026-04-21 21:02:24] -rw-r--r--. 2 boinc boinc      15665 Apr 21 17:44 start_atlas.sh
[2026-04-21 21:02:24] -rw-------. 1 boinc boinc  271840133 Apr 21 21:00 HITS.pool.root.1
[2026-04-21 21:02:24] -rw-------. 1 boinc boinc    1423360 Apr 21 21:02 result.tar.gz
21:02:25 (1284811): run_atlas exited; CPU time 46177.788743
21:02:25 (1284811): called boinc_finish(0)

</stderr_txt>
]]>

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