Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:11:57 (134729): wrapper (7.7.26015): starting
07:11:57 (134729): wrapper: running run_atlas (--nthreads 12)
[2026-04-24 07:11:57] Arguments: --nthreads 12
[2026-04-24 07:11:57] Threads: 12
[2026-04-24 07:11:57] Checking for CVMFS
[2026-04-24 07:11:57] No cvmfs_config command found, will try listing directly
[2026-04-24 07:11:57] CVMFS is ok
[2026-04-24 07:11:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-24 07:11:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-24 07:11:57] Further information can be found at the LHC@home message board.
[2026-04-24 07:11:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-24 07:11:57] Checking for apptainer binary...
[2026-04-24 07:11:57] which: no apptainer in ((null))
[2026-04-24 07:11:57] apptainer is not installed, using version from CVMFS
[2026-04-24 07:11:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-24 07:11:57] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot84/slots/16/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2026-04-24 07:11:57] apptainer works
[2026-04-24 07:11:57] Set ATHENA_PROC_NUMBER=12
[2026-04-24 07:11:57] Set ATHENA_CORE_NUMBER=12
[2026-04-24 07:11:57] Starting ATLAS job with PandaID=7104906083
[2026-04-24 07:11:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot84/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-24 07:43:11]  *** The last 200 lines of the pilot log: ***
[2026-04-24 07:43:11]  ddmendpoint_alt=None
[2026-04-24 07:43:11]  direct_access_lan=False
[2026-04-24 07:43:11]  direct_access_wan=False
[2026-04-24 07:43:11]  domain=
[2026-04-24 07:43:11]  filesize=325325
[2026-04-24 07:43:11]  filetype=log
[2026-04-24 07:43:11]  guid=86b81d4b-1d43-4370-8836-6289b92c92a8
[2026-04-24 07:43:11]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-24 07:43:11]  is_altstaged=None
[2026-04-24 07:43:11]  is_tar=False
[2026-04-24 07:43:11]  lfn=log.49820244._012586.job.log.tgz.1
[2026-04-24 07:43:11]  mtime=0
[2026-04-24 07:43:11]  protocol_id=None
[2026-04-24 07:43:11]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-24 07:43:11]  replicas=None
[2026-04-24 07:43:11]  scope=mc23_13p6TeV
[2026-04-24 07:43:11]  status=None
[2026-04-24 07:43:11]  status_code=0
[2026-04-24 07:43:11]  storage_token=
[2026-04-24 07:43:11]  surl=/var/lib/boinc/var/slot84/slots/16/PanDA_Pilot-7104906083/log.49820244._012586.job.log.tgz.1
[2026-04-24 07:43:11]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/06/93/log.49820244._012586.job.log.tgz.1
[2026-04-24 07:43:11]  workdir=None
[2026-04-24 07:43:11] ]
[2026-04-24 07:43:11] 2026-04-24 05:42:30,131 | INFO     | transferring file log.49820244._012586.job.log.tgz.1 from /var/lib/boinc/var/slot84/slots/16/PanDA_Pilot-7104906083/log.49820244._012586.job.log.tgz.1 to /var/lib/
[2026-04-24 07:43:11] 2026-04-24 05:42:30,131 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot84/slots/16/PanDA_Pilot-7104906083/log.49820244._012586.job.log.tgz.1 /var/lib/boinc/var/slot84/slots/16/
[2026-04-24 07:43:11] 2026-04-24 05:42:30,139 | INFO     | adding to output.list: log.49820244._012586.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/06/93/log.49820244._012586.job.log.tg
[2026-04-24 07:43:11] 2026-04-24 05:42:30,139 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-24 07:43:11] 2026-04-24 05:42:30,139 | INFO     | summary of transferred files:
[2026-04-24 07:43:11] 2026-04-24 05:42:30,139 | INFO     |  -- lfn=log.49820244._012586.job.log.tgz.1, status_code=0, status=transferred
[2026-04-24 07:43:11] 2026-04-24 05:42:30,139 | INFO     | stage-out finished correctly
[2026-04-24 07:43:11] 2026-04-24 05:42:30,158 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-24 07:43:11] 2026-04-24 05:42:31,524 | INFO     | monitor loop #144: job 0:7104906083 is in state 'finished'
[2026-04-24 07:43:11] 2026-04-24 05:42:31,524 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-24 07:43:11] 2026-04-24 05:42:32,416 | INFO     | job 7104906083 has state=finished
[2026-04-24 07:43:11] 2026-04-24 05:42:32,416 | INFO     | preparing for final server update for job 7104906083 in state='finished'
[2026-04-24 07:43:11] 2026-04-24 05:42:32,416 | INFO     | reading metadata from: /var/lib/boinc/var/slot84/slots/16/PanDA_Pilot-7104906083/jobReport.json
[2026-04-24 07:43:11] 2026-04-24 05:42:32,417 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot84/slots/16/workernode_map.json
[2026-04-24 07:43:11] 2026-04-24 05:42:32,418 | INFO     | this job has now completed (state=finished)
[2026-04-24 07:43:11] 2026-04-24 05:42:32,418 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-24 07:43:11] 2026-04-24 05:42:32,418 | INFO     | log transfer has been attempted: DONE
[2026-04-24 07:43:11] 2026-04-24 05:42:32,418 | INFO     | job 7104906083 has finished - writing final server update
[2026-04-24 07:43:11] 2026-04-24 05:42:32,418 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_4162331/.job.ad'
[2026-04-24 07:43:11] 2026-04-24 05:42:32,418 | INFO     | total number of processed events: 400 (read)
[2026-04-24 07:43:11] 2026-04-24 05:42:32,427 | INFO     | using path: /var/lib/boinc/var/slot84/slots/16/PanDA_Pilot-7104906083/memory_monitor_summary.json (trf name=prmon)
[2026-04-24 07:43:11] 2026-04-24 05:42:32,427 | INFO     | extracted standard info from prmon json
[2026-04-24 07:43:11] 2026-04-24 05:42:32,427 | INFO     | extracted standard memory fields from prmon json
[2026-04-24 07:43:11] 2026-04-24 05:42:32,427 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-24 07:43:11] 2026-04-24 05:42:32,427 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-24 07:43:11] 2026-04-24 05:42:32,427 | INFO     | fitting pss+swap vs Time
[2026-04-24 07:43:11] 2026-04-24 05:42:32,427 | INFO     | sum of square deviations: 3765652.0
[2026-04-24 07:43:11] 2026-04-24 05:42:32,427 | INFO     | sum of deviations: -18044410.000000004
[2026-04-24 07:43:11] 2026-04-24 05:42:32,427 | INFO     | mean x (centered): 0.0
[2026-04-24 07:43:11] 2026-04-24 05:42:32,427 | INFO     | mean y: 2794422.217391304
[2026-04-24 07:43:11] 2026-04-24 05:42:32,427 | INFO     | intersect: 2794422.217391304
[2026-04-24 07:43:11] 2026-04-24 05:42:32,427 | INFO     | chi2: 0.0004542161676556413
[2026-04-24 07:43:11] 2026-04-24 05:42:32,427 | INFO     | current memory leak: -4.79 B/s (using 23 data points, chi2=0.00)
[2026-04-24 07:43:11] 2026-04-24 05:42:32,427 | INFO     | could have reported an average CPU frequency of 3269 MHz (5 samples)
[2026-04-24 07:43:11] 2026-04-24 05:42:32,428 | INFO     | ..............................
[2026-04-24 07:43:11] 2026-04-24 05:42:32,428 | INFO     | . Timing measurements:
[2026-04-24 07:43:11] 2026-04-24 05:42:32,428 | INFO     | . get job = 0 s
[2026-04-24 07:43:11] 2026-04-24 05:42:32,428 | INFO     | . initial setup = 2 s
[2026-04-24 07:43:11] 2026-04-24 05:42:32,428 | INFO     | . payload setup = 3 s
[2026-04-24 07:43:11] 2026-04-24 05:42:32,428 | INFO     | . stage-in = 0 s
[2026-04-24 07:43:11] 2026-04-24 05:42:32,428 | INFO     | . payload execution = 1807 s
[2026-04-24 07:43:11] 2026-04-24 05:42:32,428 | INFO     | . stage-out = 0 s
[2026-04-24 07:43:11] 2026-04-24 05:42:32,428 | INFO     | . log creation = 0 s
[2026-04-24 07:43:11] 2026-04-24 05:42:32,428 | INFO     | ..............................
[2026-04-24 07:43:11] 2026-04-24 05:42:32,605 | INFO     | 
[2026-04-24 07:43:11] 2026-04-24 05:42:32,605 | INFO     | job summary report
[2026-04-24 07:43:11] 2026-04-24 05:42:32,605 | INFO     | --------------------------------------------------
[2026-04-24 07:43:11] 2026-04-24 05:42:32,606 | INFO     | PanDA job id: 7104906083
[2026-04-24 07:43:11] 2026-04-24 05:42:32,606 | INFO     | task id: 49820244
[2026-04-24 07:43:11] 2026-04-24 05:42:32,606 | INFO     | errors: (none)
[2026-04-24 07:43:11] 2026-04-24 05:42:32,606 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-24 07:43:11] 2026-04-24 05:42:32,606 | INFO     | pilot state: finished 
[2026-04-24 07:43:11] 2026-04-24 05:42:32,606 | INFO     | transexitcode: 0
[2026-04-24 07:43:11] 2026-04-24 05:42:32,606 | INFO     | exeerrorcode: 0
[2026-04-24 07:43:11] 2026-04-24 05:42:32,606 | INFO     | exeerrordiag: 
[2026-04-24 07:43:11] 2026-04-24 05:42:32,606 | INFO     | exitcode: 0
[2026-04-24 07:43:11] 2026-04-24 05:42:32,606 | INFO     | exitmsg: OK
[2026-04-24 07:43:11] 2026-04-24 05:42:32,606 | INFO     | cpuconsumptiontime: 19671 s
[2026-04-24 07:43:11] 2026-04-24 05:42:32,606 | INFO     | nevents: 400
[2026-04-24 07:43:11] 2026-04-24 05:42:32,606 | INFO     | neventsw: 0
[2026-04-24 07:43:11] 2026-04-24 05:42:32,606 | INFO     | pid: 145434
[2026-04-24 07:43:11] 2026-04-24 05:42:32,606 | INFO     | pgrp: 145434
[2026-04-24 07:43:11] 2026-04-24 05:42:32,606 | INFO     | corecount: 12
[2026-04-24 07:43:11] 2026-04-24 05:42:32,606 | INFO     | event service: False
[2026-04-24 07:43:11] 2026-04-24 05:42:32,606 | INFO     | sizes: {0: 2276389, 10: 2276389, 1815: 2301298, 1816: 2310375, 1818: 2310545}
[2026-04-24 07:43:11] 2026-04-24 05:42:32,606 | INFO     | --------------------------------------------------
[2026-04-24 07:43:11] 2026-04-24 05:42:32,606 | INFO     | 
[2026-04-24 07:43:11] 2026-04-24 05:42:32,606 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot84/slots/16
[2026-04-24 07:43:11] 2026-04-24 05:42:32,617 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-24 07:43:11] 2026-04-24 05:42:32,618 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-24 07:43:11] 2026-04-24 05:42:32,618 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-24 07:43:11] 2026-04-24 05:42:32,618 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-24 07:43:11] 2026-04-24 05:42:32,618 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-24 07:43:11] 2026-04-24 05:42:32,618 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-24 07:43:11] 2026-04-24 05:42:32,618 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-24 07:43:11] 2026-04-24 05:42:32,618 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-24 07:43:11] 2026-04-24 05:42:32,618 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-24 07:43:11] 2026-04-24 05:42:32,618 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-24 07:43:11] 2026-04-24 05:42:32,618 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-24 07:43:11] 2026-04-24 05:42:32,618 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-24 07:43:11] 2026-04-24 05:42:32,618 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-24 07:43:11] 2026-04-24 05:42:32,618 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-24 07:43:11] 2026-04-24 05:42:32,618 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-24 07:43:11] 2026-04-24 05:42:32,618 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-24 07:43:11] 2026-04-24 05:42:32,618 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-24 07:43:11] 2026-04-24 05:42:32,618 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-24 07:43:11] 2026-04-24 05:42:32,618 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-24 07:43:11] 2026-04-24 05:42:32,618 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-24 07:43:11] 2026-04-24 05:42:32,618 | INFO     | job 7104906083 has completed (purged errors)
[2026-04-24 07:43:11] 2026-04-24 05:42:32,618 | INFO     | overall cleanup function is called
[2026-04-24 07:43:11] 2026-04-24 05:42:33,625 | INFO     | --- collectZombieJob: --- 10, [145434]
[2026-04-24 07:43:11] 2026-04-24 05:42:33,625 | INFO     | zombie collector waiting for pid 145434
[2026-04-24 07:43:11] 2026-04-24 05:42:33,625 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-24 07:43:11] 2026-04-24 05:42:33,625 | INFO     | collected zombie processes
[2026-04-24 07:43:11] 2026-04-24 05:42:33,625 | INFO     | will attempt to kill all subprocesses of pid=145434
[2026-04-24 07:43:11] 2026-04-24 05:42:33,743 | INFO     | process IDs to be killed: [145434] (in reverse order)
[2026-04-24 07:43:11] 2026-04-24 05:42:33,802 | WARNING  | found no corresponding commands to process id(s)
[2026-04-24 07:43:11] 2026-04-24 05:42:33,803 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-24 07:43:11] 2026-04-24 05:42:33,811 | INFO     | did not find any defunct processes belonging to 145434
[2026-04-24 07:43:11] 2026-04-24 05:42:33,815 | INFO     | did not find any defunct processes belonging to 145434
[2026-04-24 07:43:11] 2026-04-24 05:42:33,816 | INFO     | Ready for new job
[2026-04-24 07:43:11] 2026-04-24 05:42:33,816 | INFO     | **************************************
[2026-04-24 07:43:11] 2026-04-24 05:42:33,816 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-24 07:43:11] 2026-04-24 05:42:33,816 | INFO     | **************************************
[2026-04-24 07:43:11] 2026-04-24 05:42:33,816 | INFO     | 
[2026-04-24 07:43:11] 2026-04-24 05:42:33,819 | INFO     | architecture information:
[2026-04-24 07:43:11] 2026-04-24 05:42:33,820 | INFO     | executing command: cat /etc/os-release
[2026-04-24 07:43:11] 2026-04-24 05:42:33,830 | INFO     | cat /etc/os-release:
[2026-04-24 07:43:11] NAME="CentOS Linux"
[2026-04-24 07:43:11] VERSION="7 (Core)"
[2026-04-24 07:43:11] ID="centos"
[2026-04-24 07:43:11] ID_LIKE="rhel fedora"
[2026-04-24 07:43:11] VERSION_ID="7"
[2026-04-24 07:43:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-24 07:43:11] ANSI_COLOR="0;31"
[2026-04-24 07:43:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-24 07:43:11] HOME_URL="https://www.centos.org/"
[2026-04-24 07:43:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-24 07:43:11] 
[2026-04-24 07:43:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-24 07:43:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-24 07:43:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-24 07:43:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-24 07:43:11] 
[2026-04-24 07:43:11] 2026-04-24 05:42:33,830 | INFO     | **************************************
[2026-04-24 07:43:11] 2026-04-24 05:42:34,333 | INFO     | executing command: df -mP /var/lib/boinc/var/slot84/slots/16
[2026-04-24 07:43:11] 2026-04-24 05:42:34,345 | INFO     | sufficient remaining disk space (328408760320 B)
[2026-04-24 07:43:11] 2026-04-24 05:42:34,345 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-24 07:43:11] 2026-04-24 05:42:34,345 | INFO     | current server update state: UPDATING_FINAL
[2026-04-24 07:43:11] 2026-04-24 05:42:34,346 | INFO     | update_server=False
[2026-04-24 07:43:11] 2026-04-24 05:42:34,346 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-24 07:43:11] 2026-04-24 05:42:34,346 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-24 07:43:11] 2026-04-24 05:42:34,474 | INFO     | all data control threads have been joined
[2026-04-24 07:43:11] 2026-04-24 05:42:34,702 | INFO     | all job control threads have been joined
[2026-04-24 07:43:11] 2026-04-24 05:42:35,032 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-24 07:43:11] 2026-04-24 05:42:35,032 | INFO     | aborting loop
[2026-04-24 07:43:11] 2026-04-24 05:42:35,351 | INFO     | [job] retrieve thread has finished
[2026-04-24 07:43:11] 2026-04-24 05:42:35,351 | INFO     | [job] queue monitor thread has finished
[2026-04-24 07:43:11] 2026-04-24 05:42:35,376 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-24 07:43:11] 2026-04-24 05:42:35,479 | INFO     | [data] control thread has finished
[2026-04-24 07:43:11] 2026-04-24 05:42:35,666 | INFO     | [payload] validate_post thread has finished
[2026-04-24 07:43:11] 2026-04-24 05:42:35,666 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-24 07:43:11] 2026-04-24 05:42:35,687 | INFO     | all payload control threads have been joined
[2026-04-24 07:43:11] 2026-04-24 05:42:35,708 | INFO     | [job] control thread has finished
[2026-04-24 07:43:11] 2026-04-24 05:42:36,037 | INFO     | [job] job monitor thread has finished
[2026-04-24 07:43:11] 2026-04-24 05:42:36,187 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-24 07:43:11] 2026-04-24 05:42:36,334 | INFO     | [payload] execute_payloads thread has finished
[2026-04-24 07:43:11] 2026-04-24 05:42:36,659 | INFO     | [job] validate thread has finished
[2026-04-24 07:43:11] 2026-04-24 05:42:36,692 | INFO     | [payload] control thread has finished
[2026-04-24 07:43:11] 2026-04-24 05:42:36,693 | INFO     | [job] create_data_payload thread has finished
[2026-04-24 07:43:11] 2026-04-24 05:42:36,748 | INFO     | [payload] validate_pre thread has finished
[2026-04-24 07:43:11] 2026-04-24 05:42:36,767 | INFO     | [payload] failed_post thread has finished
[2026-04-24 07:43:11] 2026-04-24 05:42:36,827 | INFO     | [data] copytool_in thread has finished
[2026-04-24 07:43:11] 2026-04-24 05:42:37,672 | INFO     | [data] copytool_out thread has finished
[2026-04-24 07:43:11] 2026-04-24 05:42:40,192 | INFO     | [data] queue_monitor thread has finished
[2026-04-24 07:43:11] 2026-04-24 05:43:04,234 | INFO     | PID=139557 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-24 07:43:11] 2026-04-24 05:43:04,234 | INFO     | found 0 job(s) in 20 queues
[2026-04-24 07:43:11] 2026-04-24 05:43:04,234 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-24 07:43:11] 2026-04-24 05:43:04,234 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-24 07:43:11] 2026-04-24 05:43:05,915 | INFO     | [monitor] cgroup control has ended
[2026-04-24 07:43:11] 2026-04-24 05:43:06,134 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23351582828352)>', '<ExcThread(monitor, started 23351344248576)>']
[2026-04-24 07:43:11] 2026-04-24 05:43:06,244 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-24 07:43:11] 2026-04-24 05:43:06,244 | INFO     | [monitor] control thread has ended
[2026-04-24 07:43:11] 2026-04-24 05:43:11,159 | INFO     | all workflow threads have been joined
[2026-04-24 07:43:11] 2026-04-24 05:43:11,159 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-24 07:43:11] 2026-04-24 05:43:11,159 | INFO     | traces error code: 0
[2026-04-24 07:43:11] 2026-04-24 05:43:11,159 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-24 07:43:11] 2026-04-24 05:43:11,209 [wrapper] ==== pilot stdout END ====
[2026-04-24 07:43:11] 2026-04-24 05:43:11,211 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-24 07:43:11] 2026-04-24 05:43:11,213 [wrapper] pilotpid: 139557
[2026-04-24 07:43:11] 2026-04-24 05:43:11,214 [wrapper] Pilot exit status: 0
[2026-04-24 07:43:11] 2026-04-24 05:43:11,218 [wrapper] pandaids: 7104906083
[2026-04-24 07:43:11] 2026-04-24 05:43:11,258 [wrapper] cleanup supervisor_pilot  185445 139558
[2026-04-24 07:43:11] 2026-04-24 05:43:11,260 [wrapper] Test setup, not cleaning
[2026-04-24 07:43:11] 2026-04-24 05:43:11,260 [wrapper] apfmon messages muted
[2026-04-24 07:43:11] 2026-04-24 05:43:11,261 [wrapper] ==== wrapper stdout END ====
[2026-04-24 07:43:11] 2026-04-24 05:43:11,262 [wrapper] ==== wrapper stderr END ====
[2026-04-24 07:43:11]  *** Error codes and diagnostics ***
[2026-04-24 07:43:11]     "exeErrorCode": 0,
[2026-04-24 07:43:11]     "pilotErrorCode": 0,
[2026-04-24 07:43:11]  *** Listing of results directory ***
[2026-04-24 07:43:11] total 2466972
[2026-04-24 07:43:11] -rw-r--r--. 1 boinc boinc     644190 Apr 21 09:41 pilot3.tar.gz
[2026-04-24 07:43:11] -rwx------. 1 boinc boinc      36322 Apr 21 09:42 runpilot2-wrapper.sh
[2026-04-24 07:43:11] -rw-r--r--. 1 boinc boinc       5094 Apr 21 09:52 queuedata.json
[2026-04-24 07:43:11] -rw-r--r--. 1 boinc boinc        100 Apr 24 07:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-24 07:43:11] -rwxr-xr-x. 1 boinc boinc       7986 Apr 24 07:11 run_atlas
[2026-04-24 07:43:11] -rw-r--r--. 1 boinc boinc        105 Apr 24 07:11 job.xml
[2026-04-24 07:43:11] -rw-r--r--. 2 boinc boinc      15665 Apr 24 07:11 start_atlas.sh
[2026-04-24 07:43:11] drwxrwx--x. 2 boinc boinc       4096 Apr 24 07:11 shared
[2026-04-24 07:43:11] -rw-r--r--. 2 boinc boinc     656916 Apr 24 07:11 input.tar.gz
[2026-04-24 07:43:11] -rw-r--r--. 1 boinc boinc       6629 Apr 24 07:11 init_data.xml
[2026-04-24 07:43:11] -rw-r--r--. 2 boinc boinc 2247877740 Apr 24 07:11 EVNT.49820242._000024.pool.root.1
[2026-04-24 07:43:11] -rw-r--r--. 1 boinc boinc          0 Apr 24 07:11 boinc_lockfile
[2026-04-24 07:43:11] -rw-r--r--. 1 boinc boinc       2550 Apr 24 07:11 pandaJob.out
[2026-04-24 07:43:11] -rw-------. 1 boinc boinc     997864 Apr 24 07:12 agis_schedconf.cvmfs.json
[2026-04-24 07:43:11] -rw-------. 1 boinc boinc    1509089 Apr 24 07:12 agis_ddmendpoints.agis.ALL.json
[2026-04-24 07:43:11] -rw-------. 1 boinc boinc        444 Apr 24 07:12 workernode_map.json
[2026-04-24 07:43:11] drwx------. 5 boinc boinc       4096 Apr 24 07:12 pilot3
[2026-04-24 07:43:11] -rw-------. 1 boinc boinc  273154380 Apr 24 07:42 HITS.49820244._012586.pool.root.1
[2026-04-24 07:43:11] -rw-r--r--. 1 boinc boinc        488 Apr 24 07:42 boinc_task_state.xml
[2026-04-24 07:43:11] -rw-------. 1 boinc boinc         95 Apr 24 07:42 pilot_heartbeat.json
[2026-04-24 07:43:11] -rw-------. 1 boinc boinc       1020 Apr 24 07:42 memory_monitor_summary.json
[2026-04-24 07:43:11] -rw-------. 1 boinc boinc     325325 Apr 24 07:42 log.49820244._012586.job.log.tgz.1
[2026-04-24 07:43:11] -rw-------. 1 boinc boinc       6363 Apr 24 07:42 heartbeat_new.json
[2026-04-24 07:43:11] -rw-------. 1 boinc boinc       6254 Apr 24 07:42 heartbeat.json
[2026-04-24 07:43:11] -rw-r--r--. 1 boinc boinc       8192 Apr 24 07:43 boinc_mmap_file
[2026-04-24 07:43:11] -rw-r--r--. 1 boinc boinc         27 Apr 24 07:43 wrapper_checkpoint.txt
[2026-04-24 07:43:11] -rw-------. 1 boinc boinc       4753 Apr 24 07:43 pilotlog.txt
[2026-04-24 07:43:11] -rw-------. 1 boinc boinc     215968 Apr 24 07:43 log.49820244._012586.job.log.1
[2026-04-24 07:43:11] -rw-------. 1 boinc boinc        357 Apr 24 07:43 output.list
[2026-04-24 07:43:11] -rw-r--r--. 1 boinc boinc        410 Apr 24 07:43 runtime_log
[2026-04-24 07:43:11] -rw-------. 1 boinc boinc     563200 Apr 24 07:43 result.tar.gz
[2026-04-24 07:43:11] -rw-r--r--. 1 boinc boinc       8845 Apr 24 07:43 runtime_log.err
[2026-04-24 07:43:11] -rw-------. 1 boinc boinc        659 Apr 24 07:43 2a4734193e59.diag
[2026-04-24 07:43:11] -rw-r--r--. 1 boinc boinc      20716 Apr 24 07:43 stderr.txt
[2026-04-24 07:43:11] HITS file was successfully produced:
[2026-04-24 07:43:11] -rw-------. 1 boinc boinc 273154380 Apr 24 07:42 shared/HITS.pool.root.1
[2026-04-24 07:43:11]  *** Contents of shared directory: ***
[2026-04-24 07:43:11] total 2463172
[2026-04-24 07:43:11] -rw-r--r--. 2 boinc boinc      15665 Apr 24 07:11 start_atlas.sh
[2026-04-24 07:43:11] -rw-r--r--. 2 boinc boinc     656916 Apr 24 07:11 input.tar.gz
[2026-04-24 07:43:11] -rw-r--r--. 2 boinc boinc 2247877740 Apr 24 07:11 ATLAS.root_0
[2026-04-24 07:43:11] -rw-------. 1 boinc boinc  273154380 Apr 24 07:42 HITS.pool.root.1
[2026-04-24 07:43:11] -rw-------. 1 boinc boinc     563200 Apr 24 07:43 result.tar.gz
07:43:12 (134729): run_atlas exited; CPU time 19685.570152
07:43:12 (134729): called boinc_finish(0)

</stderr_txt>
]]>

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