Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:04:35 (3335571): wrapper (7.7.26015): starting
16:04:35 (3335571): wrapper: running run_atlas (--nthreads 4)
[2026-04-21 16:04:35] Arguments: --nthreads 4
[2026-04-21 16:04:35] Threads: 4
[2026-04-21 16:04:35] Checking for CVMFS
[2026-04-21 16:04:35] No cvmfs_config command found, will try listing directly
[2026-04-21 16:04:35] CVMFS is ok
[2026-04-21 16:04:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 16:04:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 16:04:35] Further information can be found at the LHC@home message board.
[2026-04-21 16:04:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 16:04:35] Checking for apptainer binary...
[2026-04-21 16:04:35] which: no apptainer in ((null))
[2026-04-21 16:04:35] apptainer is not installed, using version from CVMFS
[2026-04-21 16:04:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 16:04:35] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot48/slots/3/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2026-04-21 16:04:35] apptainer works
[2026-04-21 16:04:35] Set ATHENA_PROC_NUMBER=4
[2026-04-21 16:04:35] Set ATHENA_CORE_NUMBER=4
[2026-04-21 16:04:35] Starting ATLAS job with PandaID=7105073985
[2026-04-21 16:04:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot48/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-21 19:24:47]  *** The last 200 lines of the pilot log: ***
[2026-04-21 19:24:47] 2026-04-21 17:12:36,518 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-21 19:24:47] 2026-04-21 17:12:36,518 | INFO     | log transfer has been attempted: DONE
[2026-04-21 19:24:47] 2026-04-21 17:12:36,519 | INFO     | job 7105073985 has finished - writing final server update
[2026-04-21 19:24:47] 2026-04-21 17:12:36,519 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_8825/.job.ad'
[2026-04-21 19:24:47] 2026-04-21 17:12:36,519 | INFO     | total number of processed events: 400 (read)
[2026-04-21 19:24:47] 2026-04-21 17:12:36,534 | INFO     | using path: /var/lib/boinc/var/slot48/slots/3/PanDA_Pilot-7105073985/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 19:24:47] 2026-04-21 17:12:36,535 | INFO     | extracted standard info from prmon json
[2026-04-21 19:24:47] 2026-04-21 17:12:36,535 | INFO     | extracted standard memory fields from prmon json
[2026-04-21 19:24:47] 2026-04-21 17:12:36,535 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-21 19:24:47] 2026-04-21 17:12:36,535 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-21 19:24:47] 2026-04-21 17:12:36,537 | INFO     | fitting pss+swap vs Time
[2026-04-21 19:24:47] 2026-04-21 17:12:36,537 | INFO     | sum of square deviations: 1963274020.0
[2026-04-21 19:24:47] 2026-04-21 17:12:36,538 | INFO     | sum of deviations: 8761887072.999994
[2026-04-21 19:24:47] 2026-04-21 17:12:36,538 | INFO     | mean x (centered): 0.0
[2026-04-21 19:24:47] 2026-04-21 17:12:36,538 | INFO     | mean y: 2347192.2486486486
[2026-04-21 19:24:47] 2026-04-21 17:12:36,538 | INFO     | intersect: 2347192.2486486486
[2026-04-21 19:24:47] 2026-04-21 17:12:36,538 | INFO     | chi2: 1.867692292465053
[2026-04-21 19:24:47] 2026-04-21 17:12:36,538 | INFO     | sum of square deviations: 1808350185.0
[2026-04-21 19:24:47] 2026-04-21 17:12:36,539 | INFO     | sum of deviations: 20001484193.5
[2026-04-21 19:24:47] 2026-04-21 17:12:36,539 | INFO     | mean x (centered): 0.0
[2026-04-21 19:24:47] 2026-04-21 17:12:36,539 | INFO     | mean y: 2358002.05
[2026-04-21 19:24:47] 2026-04-21 17:12:36,539 | INFO     | intersect: 2358002.05
[2026-04-21 19:24:47] 2026-04-21 17:12:36,539 | INFO     | chi2: 1.0696995646298768
[2026-04-21 19:24:47] 2026-04-21 17:12:36,539 | INFO     | current chi2=1.0696995646298768 (change=42.726134869998006 %)
[2026-04-21 19:24:47] 2026-04-21 17:12:36,540 | INFO     | sum of square deviations: 1661798600.0
[2026-04-21 19:24:47] 2026-04-21 17:12:36,540 | INFO     | sum of deviations: 19252218967.0
[2026-04-21 19:24:47] 2026-04-21 17:12:36,540 | INFO     | mean x (centered): 0.0
[2026-04-21 19:24:47] 2026-04-21 17:12:36,540 | INFO     | mean y: 2357222.274285714
[2026-04-21 19:24:47] 2026-04-21 17:12:36,540 | INFO     | intersect: 2357222.274285714
[2026-04-21 19:24:47] 2026-04-21 17:12:36,540 | INFO     | chi2: 1.0703368584098518
[2026-04-21 19:24:47] 2026-04-21 17:12:36,541 | INFO     | current chi2=1.0703368584098518 (change=-0.05957689439609337 %)
[2026-04-21 19:24:47] 2026-04-21 17:12:36,541 | INFO     | right removable region: 174
[2026-04-21 19:24:47] 2026-04-21 17:12:36,541 | INFO     | sum of square deviations: 1808350185.0
[2026-04-21 19:24:47] 2026-04-21 17:12:36,541 | INFO     | sum of deviations: -8049910933.0
[2026-04-21 19:24:47] 2026-04-21 17:12:36,541 | INFO     | mean x (centered): 0.0
[2026-04-21 19:24:47] 2026-04-21 17:12:36,541 | INFO     | mean y: 2363433.222222222
[2026-04-21 19:24:47] 2026-04-21 17:12:36,541 | INFO     | intersect: 2363433.222222222
[2026-04-21 19:24:47] 2026-04-21 17:12:36,542 | INFO     | chi2: 0.820620256899736
[2026-04-21 19:24:47] 2026-04-21 17:12:36,542 | INFO     | current chi2=0.820620256899736 (change=56.06234173528395 %)
[2026-04-21 19:24:47] 2026-04-21 17:12:36,542 | INFO     | sum of square deviations: 1661798600.0
[2026-04-21 19:24:47] 2026-04-21 17:12:36,542 | INFO     | sum of deviations: -7088342496.0
[2026-04-21 19:24:47] 2026-04-21 17:12:36,542 | INFO     | mean x (centered): 0.0
[2026-04-21 19:24:47] 2026-04-21 17:12:36,542 | INFO     | mean y: 2362452.5542857144
[2026-04-21 19:24:47] 2026-04-21 17:12:36,543 | INFO     | intersect: 2362452.5542857144
[2026-04-21 19:24:47] 2026-04-21 17:12:36,543 | INFO     | chi2: 0.8172009737577944
[2026-04-21 19:24:47] 2026-04-21 17:12:36,543 | INFO     | current chi2=0.8172009737577944 (change=0.4166705748721579 %)
[2026-04-21 19:24:47] 2026-04-21 17:12:36,543 | INFO     | left removable region: 10
[2026-04-21 19:24:47] 2026-04-21 17:12:36,543 | INFO     | sum of square deviations: 1367709365.0
[2026-04-21 19:24:47] 2026-04-21 17:12:36,543 | INFO     | sum of deviations: 3626338217.5
[2026-04-21 19:24:47] 2026-04-21 17:12:36,544 | INFO     | mean x (centered): 0.0
[2026-04-21 19:24:47] 2026-04-21 17:12:36,544 | INFO     | mean y: 2373948.9085365855
[2026-04-21 19:24:47] 2026-04-21 17:12:36,544 | INFO     | intersect: 2373948.9085365855
[2026-04-21 19:24:47] 2026-04-21 17:12:36,544 | INFO     | chi2: 0.0006616226114818063
[2026-04-21 19:24:47] 2026-04-21 17:12:36,544 | INFO     | current memory leak: 2.65 B/s (using 164 data points, chi2=0.00)
[2026-04-21 19:24:47] 2026-04-21 17:12:36,544 | INFO     | could have reported an average CPU frequency of 2769 MHz (10 samples)
[2026-04-21 19:24:47] 2026-04-21 17:12:36,544 | INFO     | ..............................
[2026-04-21 19:24:47] 2026-04-21 17:12:36,544 | INFO     | . Timing measurements:
[2026-04-21 19:24:47] 2026-04-21 17:12:36,544 | INFO     | . get job = 0 s
[2026-04-21 19:24:47] 2026-04-21 17:12:36,544 | INFO     | . initial setup = 5 s
[2026-04-21 19:24:47] 2026-04-21 17:12:36,544 | INFO     | . payload setup = 9 s
[2026-04-21 19:24:47] 2026-04-21 17:12:36,544 | INFO     | . stage-in = 0 s
[2026-04-21 19:24:47] 2026-04-21 17:12:36,544 | INFO     | . payload execution = 11238 s
[2026-04-21 19:24:47] 2026-04-21 17:12:36,544 | INFO     | . stage-out = 0 s
[2026-04-21 19:24:47] 2026-04-21 17:12:36,544 | INFO     | . log creation = 0 s
[2026-04-21 19:24:47] 2026-04-21 17:12:36,545 | INFO     | ..............................
[2026-04-21 19:24:47] 2026-04-21 17:12:36,603 | INFO     | 
[2026-04-21 19:24:47] 2026-04-21 17:12:36,603 | INFO     | job summary report
[2026-04-21 19:24:47] 2026-04-21 17:12:36,603 | INFO     | --------------------------------------------------
[2026-04-21 19:24:47] 2026-04-21 17:12:36,603 | INFO     | PanDA job id: 7105073985
[2026-04-21 19:24:47] 2026-04-21 17:12:36,604 | INFO     | task id: 49820375
[2026-04-21 19:24:47] 2026-04-21 17:12:36,604 | INFO     | errors: (none)
[2026-04-21 19:24:47] 2026-04-21 17:12:36,604 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-21 19:24:47] 2026-04-21 17:12:36,604 | INFO     | pilot state: finished 
[2026-04-21 19:24:47] 2026-04-21 17:12:36,604 | INFO     | transexitcode: 0
[2026-04-21 19:24:47] 2026-04-21 17:12:36,604 | INFO     | exeerrorcode: 0
[2026-04-21 19:24:47] 2026-04-21 17:12:36,604 | INFO     | exeerrordiag: 
[2026-04-21 19:24:47] 2026-04-21 17:12:36,604 | INFO     | exitcode: 0
[2026-04-21 19:24:47] 2026-04-21 17:12:36,604 | INFO     | exitmsg: OK
[2026-04-21 19:24:47] 2026-04-21 17:12:36,604 | INFO     | cpuconsumptiontime: 43578 s
[2026-04-21 19:24:47] 2026-04-21 17:12:36,604 | INFO     | nevents: 400
[2026-04-21 19:24:47] 2026-04-21 17:12:36,604 | INFO     | neventsw: 0
[2026-04-21 19:24:47] 2026-04-21 17:12:36,605 | INFO     | pid: 3354439
[2026-04-21 19:24:47] 2026-04-21 17:12:36,605 | INFO     | pgrp: 3354439
[2026-04-21 19:24:47] 2026-04-21 17:12:36,605 | INFO     | corecount: 4
[2026-04-21 19:24:47] 2026-04-21 17:12:36,605 | INFO     | event service: False
[2026-04-21 19:24:47] 2026-04-21 17:12:36,605 | INFO     | sizes: {0: 2274795, 1: 2276425, 11: 2276453, 11252: 2305982, 11254: 2315058, 11255: 2315196}
[2026-04-21 19:24:47] 2026-04-21 17:12:36,605 | INFO     | --------------------------------------------------
[2026-04-21 19:24:47] 2026-04-21 17:12:36,605 | INFO     | 
[2026-04-21 19:24:47] 2026-04-21 17:12:36,605 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot48/slots/3
[2026-04-21 19:24:47] 2026-04-21 17:12:36,632 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-21 19:24:47] 2026-04-21 17:12:36,633 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-21 19:24:47] 2026-04-21 17:12:36,633 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-21 19:24:47] 2026-04-21 17:12:36,633 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-21 19:24:47] 2026-04-21 17:12:36,633 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-21 19:24:47] 2026-04-21 17:12:36,633 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-21 19:24:47] 2026-04-21 17:12:36,633 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-21 19:24:47] 2026-04-21 17:12:36,633 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-21 19:24:47] 2026-04-21 17:12:36,633 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-21 19:24:47] 2026-04-21 17:12:36,634 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-21 19:24:47] 2026-04-21 17:12:36,634 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-21 19:24:47] 2026-04-21 17:12:36,634 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-21 19:24:47] 2026-04-21 17:12:36,634 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-21 19:24:47] 2026-04-21 17:12:36,634 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-21 19:24:47] 2026-04-21 17:12:36,634 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-21 19:24:47] 2026-04-21 17:12:36,634 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-21 19:24:47] 2026-04-21 17:12:36,634 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-21 19:24:47] 2026-04-21 17:12:36,634 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-21 19:24:47] 2026-04-21 17:12:36,634 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-21 19:24:47] 2026-04-21 17:12:36,634 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-21 19:24:47] 2026-04-21 17:12:36,635 | INFO     | job 7105073985 has completed (purged errors)
[2026-04-21 19:24:47] 2026-04-21 17:12:36,635 | INFO     | overall cleanup function is called
[2026-04-21 19:24:47] 2026-04-21 17:12:37,645 | INFO     | --- collectZombieJob: --- 10, [3354439]
[2026-04-21 19:24:47] 2026-04-21 17:12:37,645 | INFO     | zombie collector waiting for pid 3354439
[2026-04-21 19:24:47] 2026-04-21 17:12:37,645 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-21 19:24:47] 2026-04-21 17:12:37,645 | INFO     | collected zombie processes
[2026-04-21 19:24:47] 2026-04-21 17:12:37,645 | INFO     | will attempt to kill all subprocesses of pid=3354439
[2026-04-21 19:24:47] 2026-04-21 17:12:38,083 | INFO     | process IDs to be killed: [3354439] (in reverse order)
[2026-04-21 19:24:47] 2026-04-21 17:12:38,249 | WARNING  | found no corresponding commands to process id(s)
[2026-04-21 19:24:47] 2026-04-21 17:12:38,249 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-21 19:24:47] 2026-04-21 17:12:38,271 | INFO     | did not find any defunct processes belonging to 3354439
[2026-04-21 19:24:47] 2026-04-21 17:12:38,285 | INFO     | did not find any defunct processes belonging to 3354439
[2026-04-21 19:24:47] 2026-04-21 17:12:38,285 | INFO     | Ready for new job
[2026-04-21 19:24:47] 2026-04-21 17:12:38,287 | INFO     | **************************************
[2026-04-21 19:24:47] 2026-04-21 17:12:38,287 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-21 19:24:47] 2026-04-21 17:12:38,287 | INFO     | **************************************
[2026-04-21 19:24:47] 2026-04-21 17:12:38,287 | INFO     | 
[2026-04-21 19:24:47] 2026-04-21 17:12:38,293 | INFO     | architecture information:
[2026-04-21 19:24:47] 2026-04-21 17:12:38,293 | INFO     | executing command: cat /etc/os-release
[2026-04-21 19:24:47] 2026-04-21 17:12:38,309 | INFO     | cat /etc/os-release:
[2026-04-21 19:24:47] NAME="CentOS Linux"
[2026-04-21 19:24:47] VERSION="7 (Core)"
[2026-04-21 19:24:47] ID="centos"
[2026-04-21 19:24:47] ID_LIKE="rhel fedora"
[2026-04-21 19:24:47] VERSION_ID="7"
[2026-04-21 19:24:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-21 19:24:47] ANSI_COLOR="0;31"
[2026-04-21 19:24:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-21 19:24:47] HOME_URL="https://www.centos.org/"
[2026-04-21 19:24:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-21 19:24:47] 
[2026-04-21 19:24:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-21 19:24:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-21 19:24:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-21 19:24:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-21 19:24:47] 
[2026-04-21 19:24:47] 2026-04-21 17:12:38,309 | INFO     | **************************************
[2026-04-21 19:24:47] 2026-04-21 17:12:38,812 | INFO     | executing command: df -mP /var/lib/boinc/var/slot48/slots/3
[2026-04-21 19:24:47] 2026-04-21 17:12:38,835 | INFO     | sufficient remaining disk space (221149921280 B)
[2026-04-21 19:24:47] 2026-04-21 17:12:38,835 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-21 19:24:47] 2026-04-21 17:12:38,835 | INFO     | current server update state: UPDATING_FINAL
[2026-04-21 19:24:47] 2026-04-21 17:12:38,835 | INFO     | update_server=False
[2026-04-21 19:24:47] 2026-04-21 17:12:38,835 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-21 19:24:47] 2026-04-21 17:12:38,836 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-21 19:24:47] 2026-04-21 17:12:38,836 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-21 19:24:47] 2026-04-21 17:12:38,837 | INFO     | aborting loop
[2026-04-21 19:24:47] 2026-04-21 17:12:39,131 | INFO     | all job control threads have been joined
[2026-04-21 19:24:47] 2026-04-21 17:12:39,236 | INFO     | all data control threads have been joined
[2026-04-21 19:24:47] 2026-04-21 17:12:39,792 | INFO     | all payload control threads have been joined
[2026-04-21 19:24:47] 2026-04-21 17:12:39,841 | INFO     | [job] retrieve thread has finished
[2026-04-21 19:24:47] 2026-04-21 17:12:39,842 | INFO     | [job] job monitor thread has finished
[2026-04-21 19:24:47] 2026-04-21 17:12:40,136 | INFO     | [job] control thread has finished
[2026-04-21 19:24:47] 2026-04-21 17:12:40,220 | INFO     | [payload] failed_post thread has finished
[2026-04-21 19:24:47] 2026-04-21 17:12:40,242 | INFO     | [data] control thread has finished
[2026-04-21 19:24:47] 2026-04-21 17:12:40,423 | INFO     | [job] create_data_payload thread has finished
[2026-04-21 19:24:47] 2026-04-21 17:12:40,503 | INFO     | [job] validate thread has finished
[2026-04-21 19:24:47] 2026-04-21 17:12:40,736 | INFO     | [payload] execute_payloads thread has finished
[2026-04-21 19:24:47] 2026-04-21 17:12:40,743 | INFO     | [payload] validate_pre thread has finished
[2026-04-21 19:24:47] 2026-04-21 17:12:40,798 | INFO     | [payload] control thread has finished
[2026-04-21 19:24:47] 2026-04-21 17:12:40,842 | INFO     | [data] copytool_out thread has finished
[2026-04-21 19:24:47] 2026-04-21 17:12:40,953 | INFO     | [data] copytool_in thread has finished
[2026-04-21 19:24:47] 2026-04-21 17:12:41,156 | INFO     | [payload] validate_post thread has finished
[2026-04-21 19:24:47] 2026-04-21 17:12:41,613 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-21 19:24:47] 2026-04-21 17:12:41,764 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-21 19:24:47] 2026-04-21 17:12:42,618 | INFO     | [job] queue monitor thread has finished
[2026-04-21 19:24:47] 2026-04-21 17:12:45,771 | INFO     | [data] queue_monitor thread has finished
[2026-04-21 19:24:47] 2026-04-21 17:12:49,361 | INFO     | job.realtimelogging is not enabled
[2026-04-21 19:24:47] 2026-04-21 17:12:50,367 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-21 19:24:47] 2026-04-21 17:13:06,144 | INFO     | [monitor] cgroup control has ended
[2026-04-21 19:24:47] 2026-04-21 17:13:08,081 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22538280036160)>', '<ExcThread(monitor, started 22537970898688)>']
[2026-04-21 19:24:47] 2026-04-21 17:13:09,199 | INFO     | PID=3342039 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-21 19:24:47] 2026-04-21 17:13:09,199 | INFO     | .. there are 8 such processes running
[2026-04-21 19:24:47] 2026-04-21 17:13:09,200 | INFO     | found 0 job(s) in 20 queues
[2026-04-21 19:24:47] 2026-04-21 17:13:09,200 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-21 19:24:47] 2026-04-21 17:13:09,201 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-21 19:24:47] 2026-04-21 17:13:09,201 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-21 19:24:47] 2026-04-21 17:13:09,201 | INFO     | [monitor] control thread has ended
[2026-04-21 19:24:47] 2026-04-21 17:13:13,107 | INFO     | all workflow threads have been joined
[2026-04-21 19:24:47] 2026-04-21 17:13:13,107 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-21 19:24:47] 2026-04-21 17:13:13,108 | INFO     | traces error code: 0
[2026-04-21 19:24:47] 2026-04-21 17:13:13,108 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-21 19:24:47] 2026-04-21 17:13:13,221 [wrapper] ==== pilot stdout END ====
[2026-04-21 19:24:47] 2026-04-21 17:13:13,224 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-21 19:24:47] 2026-04-21 17:13:13,226 [wrapper] pilotpid: 3342039
[2026-04-21 19:24:47] 2026-04-21 17:13:13,229 [wrapper] Pilot exit status: 0
[2026-04-21 19:24:47] 2026-04-21 17:13:13,239 [wrapper] pandaids: 7105073985
[2026-04-21 19:24:47] 2026-04-21 17:13:13,359 [wrapper] cleanup supervisor_pilot 3618739 3342041
[2026-04-21 19:24:47] 2026-04-21 17:13:13,363 [wrapper] Test setup, not cleaning
[2026-04-21 19:24:47] 2026-04-21 17:13:13,366 [wrapper] apfmon messages muted
[2026-04-21 19:24:47] 2026-04-21 17:13:13,369 [wrapper] ==== wrapper stdout END ====
[2026-04-21 19:24:47] 2026-04-21 17:13:13,371 [wrapper] ==== wrapper stderr END ====
[2026-04-21 19:24:47]  *** Error codes and diagnostics ***
[2026-04-21 19:24:47]     "exeErrorCode": 0,
[2026-04-21 19:24:47]     "pilotErrorCode": 0,
[2026-04-21 19:24:47]  *** Listing of results directory ***
[2026-04-21 19:24:47] total 2471800
[2026-04-21 19:24:47] -rwx------. 1 boinc boinc      36322 Apr 21 09:43 runpilot2-wrapper.sh
[2026-04-21 19:24:47] -rw-r--r--. 1 boinc boinc     644190 Apr 21 11:10 pilot3.tar.gz
[2026-04-21 19:24:47] -rw-r--r--. 1 boinc boinc       5094 Apr 21 11:22 queuedata.json
[2026-04-21 19:24:47] -rw-r--r--. 1 boinc boinc        100 Apr 21 16:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-21 19:24:47] -rwxr-xr-x. 1 boinc boinc       7986 Apr 21 16:04 run_atlas
[2026-04-21 19:24:47] -rw-r--r--. 1 boinc boinc        105 Apr 21 16:04 job.xml
[2026-04-21 19:24:47] -rw-r--r--. 1 boinc boinc       6539 Apr 21 16:04 init_data.xml
[2026-04-21 19:24:47] -rw-r--r--. 2 boinc boinc 2248582226 Apr 21 16:04 EVNT.49820373._000031.pool.root.1
[2026-04-21 19:24:47] -rw-r--r--. 2 boinc boinc      15665 Apr 21 16:04 start_atlas.sh
[2026-04-21 19:24:47] drwxrwx--x. 2 boinc boinc       4096 Apr 21 16:04 shared
[2026-04-21 19:24:47] -rw-r--r--. 2 boinc boinc     656937 Apr 21 16:04 input.tar.gz
[2026-04-21 19:24:47] -rw-r--r--. 1 boinc boinc          0 Apr 21 16:04 boinc_lockfile
[2026-04-21 19:24:47] -rw-r--r--. 1 boinc boinc       2586 Apr 21 16:04 pandaJob.out
[2026-04-21 19:24:47] -rw-------. 1 boinc boinc     994521 Apr 21 16:04 agis_schedconf.cvmfs.json
[2026-04-21 19:24:47] -rw-------. 1 boinc boinc        443 Apr 21 16:04 workernode_map.json
[2026-04-21 19:24:47] drwx------. 5 boinc boinc       4096 Apr 21 16:04 pilot3
[2026-04-21 19:24:47] -rw-------. 1 boinc boinc  275655421 Apr 21 19:12 HITS.49820375._009694.pool.root.1
[2026-04-21 19:24:47] -rw-r--r--. 1 boinc boinc        488 Apr 21 19:12 boinc_task_state.xml
[2026-04-21 19:24:47] -rw-------. 1 boinc boinc       1031 Apr 21 19:12 memory_monitor_summary.json
[2026-04-21 19:24:47] -rw-------. 1 boinc boinc    1509089 Apr 21 19:12 agis_ddmendpoints.agis.ALL.json
[2026-04-21 19:24:47] -rw-------. 1 boinc boinc     362459 Apr 21 19:12 log.49820375._009694.job.log.tgz.1
[2026-04-21 19:24:47] -rw-------. 1 boinc boinc       6367 Apr 21 19:12 heartbeat_new.json
[2026-04-21 19:24:47] -rw-------. 1 boinc boinc       6258 Apr 21 19:12 heartbeat.json
[2026-04-21 19:24:47] -rw-------. 1 boinc boinc         95 Apr 21 19:13 pilot_heartbeat.json
[2026-04-21 19:24:47] -rw-------. 1 boinc boinc       4900 Apr 21 19:13 pilotlog.txt
[2026-04-21 19:24:47] -rw-------. 1 boinc boinc    1053723 Apr 21 19:13 log.49820375._009694.job.log.1
[2026-04-21 19:24:47] -rw-------. 1 boinc boinc        357 Apr 21 19:13 output.list
[2026-04-21 19:24:47] -rw-r--r--. 1 boinc boinc        410 Apr 21 19:13 runtime_log
[2026-04-21 19:24:47] -rw-------. 1 boinc boinc    1433600 Apr 21 19:13 result.tar.gz
[2026-04-21 19:24:47] -rw-r--r--. 1 boinc boinc       8827 Apr 21 19:13 runtime_log.err
[2026-04-21 19:24:47] -rw-------. 1 boinc boinc        664 Apr 21 19:13 2a93b9fab937.diag
[2026-04-21 19:24:47] -rw-r--r--. 1 boinc boinc         27 Apr 21 19:24 wrapper_checkpoint.txt
[2026-04-21 19:24:47] -rw-r--r--. 1 boinc boinc       8192 Apr 21 19:24 boinc_mmap_file
[2026-04-21 19:24:47] -rw-r--r--. 1 boinc boinc      20773 Apr 21 19:24 stderr.txt
[2026-04-21 19:24:47] HITS file was successfully produced:
[2026-04-21 19:24:47] -rw-------. 1 boinc boinc 275655421 Apr 21 19:12 shared/HITS.pool.root.1
[2026-04-21 19:24:47]  *** Contents of shared directory: ***
[2026-04-21 19:24:47] total 2467148
[2026-04-21 19:24:47] -rw-r--r--. 2 boinc boinc 2248582226 Apr 21 16:04 ATLAS.root_0
[2026-04-21 19:24:47] -rw-r--r--. 2 boinc boinc      15665 Apr 21 16:04 start_atlas.sh
[2026-04-21 19:24:47] -rw-r--r--. 2 boinc boinc     656937 Apr 21 16:04 input.tar.gz
[2026-04-21 19:24:47] -rw-------. 1 boinc boinc  275655421 Apr 21 19:12 HITS.pool.root.1
[2026-04-21 19:24:47] -rw-------. 1 boinc boinc    1433600 Apr 21 19:13 result.tar.gz
19:24:48 (3335571): run_atlas exited; CPU time 44254.294668
19:24:48 (3335571): called boinc_finish(0)

</stderr_txt>
]]>

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