Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:53 (1971993): wrapper (7.7.26015): starting
00:01:53 (1971993): wrapper: running run_atlas (--nthreads 8)
[2026-04-22 00:01:53] Arguments: --nthreads 8
[2026-04-22 00:01:53] Threads: 8
[2026-04-22 00:01:53] Checking for CVMFS
[2026-04-22 00:01:54] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-22 00:01:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-22 00:01:55] Running cvmfs_config stat atlas.cern.ch
[2026-04-22 00:01:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-22 00:01:58] 2.13.3.0 6317 169322 338088 158714 1 539 36913623 39288833 8926 16776704 0 82538350 99.561 103331286 34948 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-22 00:01:58] CVMFS is ok
[2026-04-22 00:01:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-22 00:01:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-22 00:01:58] Further information can be found at the LHC@home message board.
[2026-04-22 00:01:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-22 00:01:58] Checking for apptainer binary...
[2026-04-22 00:01:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-22 00:01:58] Running /usr/bin/apptainer --version
[2026-04-22 00:01:59] apptainer version 1.4.5-2.el9
[2026-04-22 00:01:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-22 00:02:00] c-211-18.aglt2.org
[2026-04-22 00:02:00] apptainer works
[2026-04-22 00:02:01] Set ATHENA_PROC_NUMBER=8
[2026-04-22 00:02:01] Set ATHENA_CORE_NUMBER=8
[2026-04-22 00:02:01] Starting ATLAS job with PandaID=7105214580
[2026-04-22 00:02:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
00:20:06 (1971993): BOINC client no longer exists - exiting
00:20:06 (1971993): timer handler: client dead, exiting
00:20:12 (2023539): wrapper (7.7.26015): starting
00:20:12 (2023539): wrapper: running run_atlas (--nthreads 8)
[2026-04-22 00:20:12] Arguments: --nthreads 8
[2026-04-22 00:20:12] Threads: 8
[2026-04-22 00:20:12] This job has been restarted, cleaning up previous attempt
[2026-04-22 00:20:12] Checking for CVMFS
[2026-04-22 00:20:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-22 00:20:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-22 00:20:13] Running cvmfs_config stat atlas.cern.ch
[2026-04-22 00:20:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-22 00:20:14] 2.13.3.0 6317 169341 322108 158715 3 60 36970506 39288833 5846 16776704 0 82592433 99.561 103332571 34948 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-22 00:20:14] CVMFS is ok
[2026-04-22 00:20:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-22 00:20:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-22 00:20:14] Further information can be found at the LHC@home message board.
[2026-04-22 00:20:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-22 00:20:14] Checking for apptainer binary...
[2026-04-22 00:20:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-22 00:20:14] Running /usr/bin/apptainer --version
[2026-04-22 00:20:14] apptainer version 1.4.5-2.el9
[2026-04-22 00:20:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-22 00:20:14] c-211-18.aglt2.org
[2026-04-22 00:20:14] apptainer works
[2026-04-22 00:20:14] Set ATHENA_PROC_NUMBER=8
[2026-04-22 00:20:14] Set ATHENA_CORE_NUMBER=8
[2026-04-22 00:20:14] Starting ATLAS job with PandaID=7105214580
[2026-04-22 00:20:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-22 16:58:03]  *** The last 200 lines of the pilot log: ***
[2026-04-22 16:58:03] 2026-04-22 16:16:56,848 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/2/workernode_map.json
[2026-04-22 16:58:03] 2026-04-22 16:16:56,849 | INFO     | this job has now completed (state=finished)
[2026-04-22 16:58:03] 2026-04-22 16:16:56,849 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-22 16:58:03] 2026-04-22 16:16:56,849 | INFO     | log transfer has been attempted: DONE
[2026-04-22 16:58:03] 2026-04-22 16:16:56,849 | INFO     | job 7105214580 has finished - writing final server update
[2026-04-22 16:58:03] 2026-04-22 16:16:56,850 | INFO     | total number of processed events: 400 (read)
[2026-04-22 16:58:03] 2026-04-22 16:16:56,858 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7105214580/memory_monitor_summary.json (trf name=prmon)
[2026-04-22 16:58:03] 2026-04-22 16:16:56,858 | INFO     | extracted standard info from prmon json
[2026-04-22 16:58:03] 2026-04-22 16:16:56,859 | INFO     | extracted standard memory fields from prmon json
[2026-04-22 16:58:03] 2026-04-22 16:16:56,859 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-22 16:58:03] 2026-04-22 16:16:56,859 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-22 16:58:03] 2026-04-22 16:16:56,878 | INFO     | fitting pss+swap vs Time
[2026-04-22 16:58:03] 2026-04-22 16:16:56,879 | INFO     | sum of square deviations: 108184054128.44875
[2026-04-22 16:58:03] 2026-04-22 16:16:56,892 | INFO     | sum of deviations: 14989120478.570984
[2026-04-22 16:58:03] 2026-04-22 16:16:56,892 | INFO     | mean x (centered): 0.0
[2026-04-22 16:58:03] 2026-04-22 16:16:56,892 | INFO     | mean y: 2491784.5923295454
[2026-04-22 16:58:03] 2026-04-22 16:16:56,892 | INFO     | intersect: 2491784.5923295454
[2026-04-22 16:58:03] 2026-04-22 16:16:56,893 | INFO     | chi2: 4.040253546724524
[2026-04-22 16:58:03] 2026-04-22 16:16:56,894 | INFO     | sum of square deviations: 105895452458.81
[2026-04-22 16:58:03] 2026-04-22 16:16:56,907 | INFO     | sum of deviations: 151621799615.93433
[2026-04-22 16:58:03] 2026-04-22 16:16:56,907 | INFO     | mean x (centered): 0.0
[2026-04-22 16:58:03] 2026-04-22 16:16:56,908 | INFO     | mean y: 2500862.985693848
[2026-04-22 16:58:03] 2026-04-22 16:16:56,908 | INFO     | intersect: 2500862.985693848
[2026-04-22 16:58:03] 2026-04-22 16:16:56,909 | INFO     | chi2: 1.8204096013813988
[2026-04-22 16:58:03] 2026-04-22 16:16:56,909 | INFO     | current chi2=1.8204096013813988 (change=54.94318412622338 %)
[2026-04-22 16:58:03] 2026-04-22 16:16:56,910 | INFO     | sum of square deviations: 103639363026.53198
[2026-04-22 16:58:03] 2026-04-22 16:16:56,922 | INFO     | sum of deviations: 149360907484.29553
[2026-04-22 16:58:03] 2026-04-22 16:16:56,923 | INFO     | mean x (centered): 0.0
[2026-04-22 16:58:03] 2026-04-22 16:16:56,923 | INFO     | mean y: 2500710.168587896
[2026-04-22 16:58:03] 2026-04-22 16:16:56,923 | INFO     | intersect: 2500710.168587896
[2026-04-22 16:58:03] 2026-04-22 16:16:56,924 | INFO     | chi2: 1.8205315982217598
[2026-04-22 16:58:03] 2026-04-22 16:16:56,925 | INFO     | current chi2=1.8205315982217598 (change=-0.006701614860105361 %)
[2026-04-22 16:58:03] 2026-04-22 16:16:56,925 | INFO     | right removable region: 693
[2026-04-22 16:58:03] 2026-04-22 16:16:56,926 | INFO     | sum of square deviations: 105894858318.8102
[2026-04-22 16:58:03] 2026-04-22 16:16:56,938 | INFO     | sum of deviations: -116434155050.09015
[2026-04-22 16:58:03] 2026-04-22 16:16:56,938 | INFO     | mean x (centered): 0.0
[2026-04-22 16:58:03] 2026-04-22 16:16:56,939 | INFO     | mean y: 2500518.5021459227
[2026-04-22 16:58:03] 2026-04-22 16:16:56,939 | INFO     | intersect: 2500518.5021459227
[2026-04-22 16:58:03] 2026-04-22 16:16:56,940 | INFO     | chi2: 2.3354346457316364
[2026-04-22 16:58:03] 2026-04-22 16:16:56,940 | INFO     | current chi2=2.3354346457316364 (change=42.195839475841865 %)
[2026-04-22 16:58:03] 2026-04-22 16:16:56,941 | INFO     | sum of square deviations: 103638174746.53192
[2026-04-22 16:58:03] 2026-04-22 16:16:56,953 | INFO     | sum of deviations: -123823077049.31989
[2026-04-22 16:58:03] 2026-04-22 16:16:56,954 | INFO     | mean x (centered): 0.0
[2026-04-22 16:58:03] 2026-04-22 16:16:56,954 | INFO     | mean y: 2501014.3832853027
[2026-04-22 16:58:03] 2026-04-22 16:16:56,954 | INFO     | intersect: 2501014.3832853027
[2026-04-22 16:58:03] 2026-04-22 16:16:56,955 | INFO     | chi2: 2.3183251612444646
[2026-04-22 16:58:03] 2026-04-22 16:16:56,955 | INFO     | current chi2=2.3183251612444646 (change=0.7326038653422373 %)
[2026-04-22 16:58:03] 2026-04-22 16:16:56,956 | INFO     | left removable region: 10
[2026-04-22 16:58:03] 2026-04-22 16:16:56,956 | INFO     | sum of square deviations: 98788075003.0161
[2026-04-22 16:58:03] 2026-04-22 16:16:56,969 | INFO     | sum of deviations: 10365175071.295744
[2026-04-22 16:58:03] 2026-04-22 16:16:56,969 | INFO     | mean x (centered): 0.0
[2026-04-22 16:58:03] 2026-04-22 16:16:56,969 | INFO     | mean y: 2510188.0058565154
[2026-04-22 16:58:03] 2026-04-22 16:16:56,969 | INFO     | intersect: 2510188.0058565154
[2026-04-22 16:58:03] 2026-04-22 16:16:56,970 | INFO     | chi2: 0.07790049003994087
[2026-04-22 16:58:03] 2026-04-22 16:16:56,971 | INFO     | current memory leak: 0.10 B/s (using 683 data points, chi2=0.08)
[2026-04-22 16:58:03] 2026-04-22 16:16:56,971 | INFO     | could have reported an average CPU frequency of 2900 MHz (27 samples)
[2026-04-22 16:58:03] 2026-04-22 16:16:56,972 | INFO     | ..............................
[2026-04-22 16:58:03] 2026-04-22 16:16:56,972 | INFO     | . Timing measurements:
[2026-04-22 16:58:03] 2026-04-22 16:16:56,972 | INFO     | . get job = 0 s
[2026-04-22 16:58:03] 2026-04-22 16:16:56,972 | INFO     | . initial setup = 1 s
[2026-04-22 16:58:03] 2026-04-22 16:16:56,972 | INFO     | . payload setup = 25 s
[2026-04-22 16:58:03] 2026-04-22 16:16:56,972 | INFO     | . stage-in = 0 s
[2026-04-22 16:58:03] 2026-04-22 16:16:56,973 | INFO     | . payload execution = 42929 s
[2026-04-22 16:58:03] 2026-04-22 16:16:56,973 | INFO     | . stage-out = 3 s
[2026-04-22 16:58:03] 2026-04-22 16:16:56,973 | INFO     | . log creation = 0 s
[2026-04-22 16:58:03] 2026-04-22 16:16:56,973 | INFO     | ..............................
[2026-04-22 16:58:03] 2026-04-22 16:16:57,116 | INFO     | 
[2026-04-22 16:58:03] 2026-04-22 16:16:57,116 | INFO     | job summary report
[2026-04-22 16:58:03] 2026-04-22 16:16:57,116 | INFO     | --------------------------------------------------
[2026-04-22 16:58:03] 2026-04-22 16:16:57,116 | INFO     | PanDA job id: 7105214580
[2026-04-22 16:58:03] 2026-04-22 16:16:57,117 | INFO     | task id: 49514634
[2026-04-22 16:58:03] 2026-04-22 16:16:57,117 | INFO     | errors: (none)
[2026-04-22 16:58:03] 2026-04-22 16:16:57,117 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-22 16:58:03] 2026-04-22 16:16:57,117 | INFO     | pilot state: finished 
[2026-04-22 16:58:03] 2026-04-22 16:16:57,117 | INFO     | transexitcode: 0
[2026-04-22 16:58:03] 2026-04-22 16:16:57,117 | INFO     | exeerrorcode: 0
[2026-04-22 16:58:03] 2026-04-22 16:16:57,117 | INFO     | exeerrordiag: 
[2026-04-22 16:58:03] 2026-04-22 16:16:57,118 | INFO     | exitcode: 0
[2026-04-22 16:58:03] 2026-04-22 16:16:57,118 | INFO     | exitmsg: OK
[2026-04-22 16:58:03] 2026-04-22 16:16:57,118 | INFO     | cpuconsumptiontime: 73627 s
[2026-04-22 16:58:03] 2026-04-22 16:16:57,118 | INFO     | nevents: 400
[2026-04-22 16:58:03] 2026-04-22 16:16:57,118 | INFO     | neventsw: 0
[2026-04-22 16:58:03] 2026-04-22 16:16:57,118 | INFO     | pid: 2048070
[2026-04-22 16:58:03] 2026-04-22 16:16:57,118 | INFO     | pgrp: 2048070
[2026-04-22 16:58:03] 2026-04-22 16:16:57,119 | INFO     | corecount: 8
[2026-04-22 16:58:03] 2026-04-22 16:16:57,119 | INFO     | event service: False
[2026-04-22 16:58:03] 2026-04-22 16:16:57,119 | INFO     | sizes: {0: 2274520, 1: 2274548, 2: 2276349, 12: 2276377, 42958: 2320514, 42959: 2320513, 42963: 2329695, 42965: 2329751, 42967: 2329945}
[2026-04-22 16:58:03] 2026-04-22 16:16:57,119 | INFO     | --------------------------------------------------
[2026-04-22 16:58:03] 2026-04-22 16:16:57,119 | INFO     | 
[2026-04-22 16:58:03] 2026-04-22 16:16:57,119 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-04-22 16:58:03] 2026-04-22 16:16:57,244 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-22 16:58:03] 2026-04-22 16:16:57,245 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-22 16:58:03] 2026-04-22 16:16:57,245 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-22 16:58:03] 2026-04-22 16:16:57,245 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-22 16:58:03] 2026-04-22 16:16:57,245 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-22 16:58:03] 2026-04-22 16:16:57,245 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-22 16:58:03] 2026-04-22 16:16:57,245 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-22 16:58:03] 2026-04-22 16:16:57,246 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-22 16:58:03] 2026-04-22 16:16:57,246 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-22 16:58:03] 2026-04-22 16:16:57,246 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-22 16:58:03] 2026-04-22 16:16:57,246 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-22 16:58:03] 2026-04-22 16:16:57,246 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-22 16:58:03] 2026-04-22 16:16:57,246 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-22 16:58:03] 2026-04-22 16:16:57,247 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-22 16:58:03] 2026-04-22 16:16:57,247 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-22 16:58:03] 2026-04-22 16:16:57,247 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-22 16:58:03] 2026-04-22 16:16:57,247 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-22 16:58:03] 2026-04-22 16:16:57,247 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-22 16:58:03] 2026-04-22 16:16:57,247 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-22 16:58:03] 2026-04-22 16:16:57,255 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-22 16:58:03] 2026-04-22 16:16:57,255 | INFO     | job 7105214580 has completed (purged errors)
[2026-04-22 16:58:03] 2026-04-22 16:16:57,255 | INFO     | overall cleanup function is called
[2026-04-22 16:58:03] 2026-04-22 16:16:58,266 | INFO     | --- collectZombieJob: --- 10, [2048070]
[2026-04-22 16:58:03] 2026-04-22 16:16:58,266 | INFO     | zombie collector waiting for pid 2048070
[2026-04-22 16:58:03] 2026-04-22 16:16:58,266 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-22 16:58:03] 2026-04-22 16:16:58,266 | INFO     | collected zombie processes
[2026-04-22 16:58:03] 2026-04-22 16:16:58,267 | INFO     | will attempt to kill all subprocesses of pid=2048070
[2026-04-22 16:58:03] 2026-04-22 16:16:58,927 | INFO     | process IDs to be killed: [2048070] (in reverse order)
[2026-04-22 16:58:03] 2026-04-22 16:16:59,185 | WARNING  | found no corresponding commands to process id(s)
[2026-04-22 16:58:03] 2026-04-22 16:16:59,185 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-22 16:58:03] 2026-04-22 16:16:59,203 | INFO     | did not find any defunct processes belonging to 2048070
[2026-04-22 16:58:03] 2026-04-22 16:16:59,219 | INFO     | did not find any defunct processes belonging to 2048070
[2026-04-22 16:58:03] 2026-04-22 16:16:59,219 | INFO     | Ready for new job
[2026-04-22 16:58:03] 2026-04-22 16:16:59,222 | INFO     | **************************************
[2026-04-22 16:58:03] 2026-04-22 16:16:59,222 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-22 16:58:03] 2026-04-22 16:16:59,222 | INFO     | **************************************
[2026-04-22 16:58:03] 2026-04-22 16:16:59,222 | INFO     | 
[2026-04-22 16:58:03] 2026-04-22 16:16:59,224 | INFO     | architecture information:
[2026-04-22 16:58:03] 2026-04-22 16:16:59,225 | INFO     | executing command: cat /etc/os-release
[2026-04-22 16:58:03] 2026-04-22 16:16:59,243 | INFO     | cat /etc/os-release:
[2026-04-22 16:58:03] NAME="CentOS Linux"
[2026-04-22 16:58:03] VERSION="7 (Core)"
[2026-04-22 16:58:03] ID="centos"
[2026-04-22 16:58:03] ID_LIKE="rhel fedora"
[2026-04-22 16:58:03] VERSION_ID="7"
[2026-04-22 16:58:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-22 16:58:03] ANSI_COLOR="0;31"
[2026-04-22 16:58:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-22 16:58:03] HOME_URL="https://www.centos.org/"
[2026-04-22 16:58:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-22 16:58:03] 
[2026-04-22 16:58:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-22 16:58:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-22 16:58:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-22 16:58:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-22 16:58:03] 
[2026-04-22 16:58:03] 2026-04-22 16:16:59,243 | INFO     | **************************************
[2026-04-22 16:58:03] 2026-04-22 16:16:59,749 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-04-22 16:58:03] 2026-04-22 16:16:59,820 | INFO     | sufficient remaining disk space (44678774784 B)
[2026-04-22 16:58:03] 2026-04-22 16:16:59,820 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-22 16:58:03] 2026-04-22 16:16:59,820 | INFO     | current server update state: UPDATING_FINAL
[2026-04-22 16:58:03] 2026-04-22 16:16:59,821 | INFO     | update_server=False
[2026-04-22 16:58:03] 2026-04-22 16:16:59,821 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-22 16:58:03] 2026-04-22 16:17:00,225 | INFO     | all payload control threads have been joined
[2026-04-22 16:58:03] 2026-04-22 16:17:00,246 | INFO     | all data control threads have been joined
[2026-04-22 16:58:03] 2026-04-22 16:17:00,583 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-22 16:58:03] 2026-04-22 16:17:00,583 | INFO     | aborting loop
[2026-04-22 16:58:03] 2026-04-22 16:17:00,827 | INFO     | [job] retrieve thread has finished
[2026-04-22 16:58:03] 2026-04-22 16:17:01,012 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-22 16:58:03] 2026-04-22 16:17:01,169 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-22 16:58:03] 2026-04-22 16:17:01,213 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-22 16:58:03] 2026-04-22 16:17:01,231 | INFO     | [payload] control thread has finished
[2026-04-22 16:58:03] 2026-04-22 16:17:01,253 | INFO     | [data] control thread has finished
[2026-04-22 16:58:03] 2026-04-22 16:17:01,375 | INFO     | [data] copytool_in thread has finished
[2026-04-22 16:58:03] 2026-04-22 16:17:01,383 | INFO     | [payload] validate_post thread has finished
[2026-04-22 16:58:03] 2026-04-22 16:17:01,420 | INFO     | all job control threads have been joined
[2026-04-22 16:58:03] 2026-04-22 16:17:01,459 | INFO     | [job] create_data_payload thread has finished
[2026-04-22 16:58:03] 2026-04-22 16:17:01,588 | INFO     | [job] job monitor thread has finished
[2026-04-22 16:58:03] 2026-04-22 16:17:01,664 | INFO     | [payload] execute_payloads thread has finished
[2026-04-22 16:58:03] 2026-04-22 16:17:01,828 | INFO     | [job] validate thread has finished
[2026-04-22 16:58:03] 2026-04-22 16:17:02,013 | INFO     | [payload] validate_pre thread has finished
[2026-04-22 16:58:03] 2026-04-22 16:17:02,131 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-22 16:58:03] 2026-04-22 16:17:02,137 | INFO     | [payload] failed_post thread has finished
[2026-04-22 16:58:03] 2026-04-22 16:17:02,426 | INFO     | [job] control thread has finished
[2026-04-22 16:58:03] 2026-04-22 16:17:03,137 | INFO     | [job] queue monitor thread has finished
[2026-04-22 16:58:03] 2026-04-22 16:17:03,222 | INFO     | [data] copytool_out thread has finished
[2026-04-22 16:58:03] 2026-04-22 16:17:05,184 | INFO     | [data] queue_monitor thread has finished
[2026-04-22 16:58:03] 2026-04-22 16:17:29,065 | INFO     | PID=2035454 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-22 16:58:03] 2026-04-22 16:17:29,065 | INFO     | .. there are 8 such processes running
[2026-04-22 16:58:03] 2026-04-22 16:17:29,065 | INFO     | found 0 job(s) in 20 queues
[2026-04-22 16:58:03] 2026-04-22 16:17:29,065 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-22 16:58:03] 2026-04-22 16:17:29,065 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-22 16:58:03] 2026-04-22 16:17:59,262 | INFO     | [monitor] cgroup control has ended
[2026-04-22 16:58:03] 2026-04-22 16:18:00,103 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140281146263360)>', '<ExcThread(monitor, started 140280762177280)>']
[2026-04-22 16:58:03] 2026-04-22 16:18:00,284 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-22 16:58:03] 2026-04-22 16:18:00,284 | INFO     | [monitor] control thread has ended
[2026-04-22 16:58:03] 2026-04-22 16:18:05,131 | INFO     | all workflow threads have been joined
[2026-04-22 16:58:03] 2026-04-22 16:18:05,131 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-22 16:58:03] 2026-04-22 16:18:05,131 | INFO     | traces error code: 0
[2026-04-22 16:58:03] 2026-04-22 16:18:05,131 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-22 16:58:03] 2026-04-22 16:18:05,566 [wrapper] ==== pilot stdout END ====
[2026-04-22 16:58:03] 2026-04-22 16:18:05,584 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-22 16:58:03] 2026-04-22 16:18:05,636 [wrapper] pilotpid: 2035454
[2026-04-22 16:58:03] 2026-04-22 16:18:05,672 [wrapper] Pilot exit status: 0
[2026-04-22 16:58:03] 2026-04-22 16:18:05,827 [wrapper] pandaids: 7105214580 7105214580
[2026-04-22 16:58:03] 2026-04-22 16:18:05,958 [wrapper] cleanup supervisor_pilot 3006283 2035455
[2026-04-22 16:58:03] 2026-04-22 16:18:05,970 [wrapper] Test setup, not cleaning
[2026-04-22 16:58:03] 2026-04-22 16:18:05,986 [wrapper] apfmon messages muted
[2026-04-22 16:58:03] 2026-04-22 16:18:06,001 [wrapper] ==== wrapper stdout END ====
[2026-04-22 16:58:03] 2026-04-22 16:18:06,050 [wrapper] ==== wrapper stderr END ====
[2026-04-22 16:58:03]  *** Error codes and diagnostics ***
[2026-04-22 16:58:03]     "exeErrorCode": 0,
[2026-04-22 16:58:03]     "pilotErrorCode": 0,
[2026-04-22 16:58:03]  *** Listing of results directory ***
[2026-04-22 16:58:03] total 529576
[2026-04-22 16:58:03] drwx------. 5 boincer umatlas      4096 Apr  1 08:07 pilot3
[2026-04-22 16:58:03] -rwx------. 1 boincer umatlas     36322 Apr 21 03:58 runpilot2-wrapper.sh
[2026-04-22 16:58:03] -rw-r--r--. 1 boincer umatlas    644190 Apr 21 05:10 pilot3.tar.gz
[2026-04-22 16:58:03] -rw-r--r--. 1 boincer umatlas      5094 Apr 21 05:22 queuedata.json
[2026-04-22 16:58:03] -rw-r--r--. 1 boincer umatlas       100 Apr 22 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-22 16:58:03] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 22 00:01 run_atlas
[2026-04-22 16:58:03] -rw-r--r--. 1 boincer umatlas       105 Apr 22 00:01 job.xml
[2026-04-22 16:58:03] -rw-r--r--. 3 boincer umatlas 189059381 Apr 22 00:01 EVNT.49514628._000010.pool.root.1
[2026-04-22 16:58:03] -rw-r--r--. 3 boincer umatlas 189059381 Apr 22 00:01 ATLAS.root_0
[2026-04-22 16:58:03] -rw-r--r--. 2 boincer umatlas     15665 Apr 22 00:01 start_atlas.sh
[2026-04-22 16:58:03] drwxrwx--x. 2 boincer umatlas      4096 Apr 22 00:01 shared
[2026-04-22 16:58:03] -rw-r--r--. 2 boincer umatlas    656906 Apr 22 00:01 input.tar.gz
[2026-04-22 16:58:03] -rw-r--r--. 1 boincer umatlas         0 Apr 22 00:01 boinc_lockfile
[2026-04-22 16:58:03] -rw-r--r--. 1 boincer umatlas      2478 Apr 22 00:20 pandaJob.out
[2026-04-22 16:58:03] -rw-------. 1 boincer umatlas        57 Apr 22 00:20 setup.sh.local
[2026-04-22 16:58:03] -rw-------. 1 boincer umatlas    997066 Apr 22 00:20 agis_schedconf.cvmfs.json
[2026-04-22 16:58:03] -rw-------. 1 boincer umatlas       442 Apr 22 00:20 workernode_map.json
[2026-04-22 16:58:03] -rw-------. 1 boincer umatlas 152286626 Apr 22 12:13 HITS.49514634._001819.pool.root.1
[2026-04-22 16:58:03] -rw-r--r--. 1 boincer umatlas       488 Apr 22 12:14 boinc_task_state.xml
[2026-04-22 16:58:03] -rw-------. 1 boincer umatlas        95 Apr 22 12:16 pilot_heartbeat.json
[2026-04-22 16:58:03] -rw-------. 1 boincer umatlas      1042 Apr 22 12:16 memory_monitor_summary.json
[2026-04-22 16:58:03] -rw-------. 1 boincer umatlas   1509089 Apr 22 12:16 agis_ddmendpoints.agis.ALL.json
[2026-04-22 16:58:03] -rw-------. 1 boincer umatlas    617030 Apr 22 12:16 log.49514634._001819.job.log.tgz.1
[2026-04-22 16:58:03] -rw-------. 1 boincer umatlas      6399 Apr 22 12:16 heartbeat_new.json
[2026-04-22 16:58:03] -rw-------. 1 boincer umatlas      6290 Apr 22 12:16 heartbeat.json
[2026-04-22 16:58:03] -rw-------. 1 boincer umatlas      4818 Apr 22 12:18 pilotlog.txt
[2026-04-22 16:58:03] -rw-------. 1 boincer umatlas   3288963 Apr 22 12:18 log.49514634._001819.job.log.1
[2026-04-22 16:58:03] -rw-------. 1 boincer umatlas       357 Apr 22 12:18 output.list
[2026-04-22 16:58:03] -rw-r--r--. 1 boincer umatlas       410 Apr 22 12:18 runtime_log
[2026-04-22 16:58:03] -rw-------. 1 boincer umatlas   3921920 Apr 22 12:18 result.tar.gz
[2026-04-22 16:58:03] -rw-r--r--. 1 boincer umatlas      9049 Apr 22 12:18 runtime_log.err
[2026-04-22 16:58:03] -rw-------. 1 boincer umatlas       783 Apr 22 12:18 2e1dd265003d.diag
[2026-04-22 16:58:03] -rw-r--r--. 1 boincer umatlas      6438 Apr 22 16:55 init_data.xml
[2026-04-22 16:58:03] -rw-r--r--. 1 boincer umatlas      8192 Apr 22 16:58 boinc_mmap_file
[2026-04-22 16:58:03] -rw-r--r--. 1 boincer umatlas        27 Apr 22 16:58 wrapper_checkpoint.txt
[2026-04-22 16:58:03] -rw-r--r--. 1 boincer umatlas     23361 Apr 22 16:58 stderr.txt
[2026-04-22 16:58:03] HITS file was successfully produced:
[2026-04-22 16:58:03] -rw-------. 1 boincer umatlas 152286626 Apr 22 12:13 shared/HITS.pool.root.1
[2026-04-22 16:58:03]  *** Contents of shared directory: ***
[2026-04-22 16:58:03] total 337852
[2026-04-22 16:58:03] -rw-r--r--. 3 boincer umatlas 189059381 Apr 22 00:01 ATLAS.root_0
[2026-04-22 16:58:03] -rw-r--r--. 2 boincer umatlas     15665 Apr 22 00:01 start_atlas.sh
[2026-04-22 16:58:03] -rw-r--r--. 2 boincer umatlas    656906 Apr 22 00:01 input.tar.gz
[2026-04-22 16:58:03] -rw-------. 1 boincer umatlas 152286626 Apr 22 12:13 HITS.pool.root.1
[2026-04-22 16:58:03] -rw-------. 1 boincer umatlas   3921920 Apr 22 12:18 result.tar.gz
16:58:05 (2023539): run_atlas exited; CPU time 74947.950397
16:58:05 (2023539): called boinc_finish(0)

</stderr_txt>
]]>

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