Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:23:23 (29368): wrapper (7.7.26015): starting
18:23:23 (29368): wrapper: running run_atlas (--nthreads 8)
[2026-04-21 18:23:23] Arguments: --nthreads 8
[2026-04-21 18:23:23] Threads: 8
[2026-04-21 18:23:23] Checking for CVMFS
[2026-04-21 18:23:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-21 18:23:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-21 18:23:23] Running cvmfs_config stat atlas.cern.ch
[2026-04-21 18:23:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-21 18:23:24] 2.11.2.0 32757 8599 94280 158697 2 116 23005582 25165824 338 130560 0 2476858 99.682 5420378 4867 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-21 18:23:24] CVMFS is ok
[2026-04-21 18:23:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 18:23:24] Checking for apptainer binary...
[2026-04-21 18:23:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-21 18:23:24] Running /usr/bin/apptainer --version
[2026-04-21 18:23:24] apptainer version 1.3.2-1.el7
[2026-04-21 18:23:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 18:23:25] cg-vwn430.simple-grid.lan
[2026-04-21 18:23:25] apptainer works
[2026-04-21 18:23:25] Set ATHENA_PROC_NUMBER=8
[2026-04-21 18:23:25] Set ATHENA_CORE_NUMBER=8
[2026-04-21 18:23:25] Starting ATLAS job with PandaID=7105146336
[2026-04-21 18:23:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-22 00:25:34]  *** The last 200 lines of the pilot log: ***
[2026-04-22 00:25:34] 2026-04-21 22:24:39,048 | INFO     | this job has now completed (state=finished)
[2026-04-22 00:25:34] 2026-04-21 22:24:39,048 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-22 00:25:34] 2026-04-21 22:24:39,049 | INFO     | log transfer has been attempted: DONE
[2026-04-22 00:25:34] 2026-04-21 22:24:39,049 | INFO     | job 7105146336 has finished - writing final server update
[2026-04-22 00:25:34] 2026-04-21 22:24:39,049 | INFO     | total number of processed events: 400 (read)
[2026-04-22 00:25:34] 2026-04-21 22:24:39,051 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7105146336/memory_monitor_summary.json (trf name=prmon)
[2026-04-22 00:25:34] 2026-04-21 22:24:39,052 | INFO     | extracted standard info from prmon json
[2026-04-22 00:25:34] 2026-04-21 22:24:39,052 | INFO     | extracted standard memory fields from prmon json
[2026-04-22 00:25:34] 2026-04-21 22:24:39,052 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-22 00:25:34] 2026-04-21 22:24:39,052 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-22 00:25:34] 2026-04-21 22:24:39,059 | INFO     | fitting pss+swap vs Time
[2026-04-22 00:25:34] 2026-04-21 22:24:39,060 | INFO     | sum of square deviations: 13872669410.0
[2026-04-22 00:25:34] 2026-04-21 22:24:39,064 | INFO     | sum of deviations: -88528403483.00002
[2026-04-22 00:25:34] 2026-04-21 22:24:39,064 | INFO     | mean x (centered): 0.0
[2026-04-22 00:25:34] 2026-04-21 22:24:39,064 | INFO     | mean y: 2564400.41971831
[2026-04-22 00:25:34] 2026-04-21 22:24:39,065 | INFO     | intersect: 2564400.41971831
[2026-04-22 00:25:34] 2026-04-21 22:24:39,065 | INFO     | chi2: 3.3938078351905006
[2026-04-22 00:25:34] 2026-04-21 22:24:39,070 | INFO     | sum of square deviations: 13294714387.5
[2026-04-22 00:25:34] 2026-04-21 22:24:39,074 | INFO     | sum of deviations: -37912602575.00001
[2026-04-22 00:25:34] 2026-04-21 22:24:39,074 | INFO     | mean x (centered): 0.0
[2026-04-22 00:25:34] 2026-04-21 22:24:39,074 | INFO     | mean y: 2577645.777142857
[2026-04-22 00:25:34] 2026-04-21 22:24:39,074 | INFO     | intersect: 2577645.777142857
[2026-04-22 00:25:34] 2026-04-21 22:24:39,075 | INFO     | chi2: 1.7600810168367655
[2026-04-22 00:25:34] 2026-04-21 22:24:39,075 | INFO     | current chi2=1.7600810168367655 (change=48.138459738750385 %)
[2026-04-22 00:25:34] 2026-04-21 22:24:39,076 | INFO     | sum of square deviations: 12733038740.0
[2026-04-22 00:25:34] 2026-04-21 22:24:39,080 | INFO     | sum of deviations: -37213017120.999954
[2026-04-22 00:25:34] 2026-04-21 22:24:39,080 | INFO     | mean x (centered): 0.0
[2026-04-22 00:25:34] 2026-04-21 22:24:39,080 | INFO     | mean y: 2577835.7652173913
[2026-04-22 00:25:34] 2026-04-21 22:24:39,080 | INFO     | intersect: 2577835.7652173913
[2026-04-22 00:25:34] 2026-04-21 22:24:39,081 | INFO     | chi2: 1.7592207486100282
[2026-04-22 00:25:34] 2026-04-21 22:24:39,081 | INFO     | current chi2=1.7592207486100282 (change=0.048876626615940146 %)
[2026-04-22 00:25:34] 2026-04-21 22:24:39,081 | INFO     | right removable region: 344
[2026-04-22 00:25:34] 2026-04-21 22:24:39,082 | INFO     | sum of square deviations: 13294714387.5
[2026-04-22 00:25:34] 2026-04-21 22:24:39,085 | INFO     | sum of deviations: -144532209188.49997
[2026-04-22 00:25:34] 2026-04-21 22:24:39,086 | INFO     | mean x (centered): 0.0
[2026-04-22 00:25:34] 2026-04-21 22:24:39,086 | INFO     | mean y: 2579083.3114285716
[2026-04-22 00:25:34] 2026-04-21 22:24:39,086 | INFO     | intersect: 2579083.3114285716
[2026-04-22 00:25:34] 2026-04-21 22:24:39,086 | INFO     | chi2: 1.9417216844948393
[2026-04-22 00:25:34] 2026-04-21 22:24:39,087 | INFO     | current chi2=1.9417216844948393 (change=42.786339746138076 %)
[2026-04-22 00:25:34] 2026-04-21 22:24:39,087 | INFO     | sum of square deviations: 12733038740.0
[2026-04-22 00:25:34] 2026-04-21 22:24:39,095 | INFO     | sum of deviations: -139089683932.99982
[2026-04-22 00:25:34] 2026-04-21 22:24:39,095 | INFO     | mean x (centered): 0.0
[2026-04-22 00:25:34] 2026-04-21 22:24:39,095 | INFO     | mean y: 2577593.176811594
[2026-04-22 00:25:34] 2026-04-21 22:24:39,096 | INFO     | intersect: 2577593.176811594
[2026-04-22 00:25:34] 2026-04-21 22:24:39,096 | INFO     | chi2: 1.930405239491614
[2026-04-22 00:25:34] 2026-04-21 22:24:39,096 | INFO     | current chi2=1.930405239491614 (change=0.5828046879009523 %)
[2026-04-22 00:25:34] 2026-04-21 22:24:39,097 | INFO     | left removable region: 10
[2026-04-22 00:25:34] 2026-04-21 22:24:39,097 | INFO     | sum of square deviations: 11553509647.5
[2026-04-22 00:25:34] 2026-04-21 22:24:39,101 | INFO     | sum of deviations: -87523252650.5
[2026-04-22 00:25:34] 2026-04-21 22:24:39,101 | INFO     | mean x (centered): 0.0
[2026-04-22 00:25:34] 2026-04-21 22:24:39,101 | INFO     | mean y: 2591904.4341317364
[2026-04-22 00:25:34] 2026-04-21 22:24:39,101 | INFO     | intersect: 2591904.4341317364
[2026-04-22 00:25:34] 2026-04-21 22:24:39,102 | INFO     | chi2: 0.2641267782586024
[2026-04-22 00:25:34] 2026-04-21 22:24:39,102 | INFO     | current memory leak: -7.58 B/s (using 334 data points, chi2=0.26)
[2026-04-22 00:25:34] 2026-04-21 22:24:39,103 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-04-22 00:25:34] 2026-04-21 22:24:39,103 | INFO     | ..............................
[2026-04-22 00:25:34] 2026-04-21 22:24:39,103 | INFO     | . Timing measurements:
[2026-04-22 00:25:34] 2026-04-21 22:24:39,103 | INFO     | . get job = 0 s
[2026-04-22 00:25:34] 2026-04-21 22:24:39,103 | INFO     | . initial setup = 6 s
[2026-04-22 00:25:34] 2026-04-21 22:24:39,103 | INFO     | . payload setup = 13 s
[2026-04-22 00:25:34] 2026-04-21 22:24:39,104 | INFO     | . stage-in = 0 s
[2026-04-22 00:25:34] 2026-04-21 22:24:39,104 | INFO     | . payload execution = 21615 s
[2026-04-22 00:25:34] 2026-04-21 22:24:39,104 | INFO     | . stage-out = 3 s
[2026-04-22 00:25:34] 2026-04-21 22:24:39,104 | INFO     | . log creation = 1 s
[2026-04-22 00:25:34] 2026-04-21 22:24:39,104 | INFO     | ..............................
[2026-04-22 00:25:34] 2026-04-21 22:24:39,318 | INFO     | 
[2026-04-22 00:25:34] 2026-04-21 22:24:39,319 | INFO     | job summary report
[2026-04-22 00:25:34] 2026-04-21 22:24:39,319 | INFO     | --------------------------------------------------
[2026-04-22 00:25:34] 2026-04-21 22:24:39,319 | INFO     | PanDA job id: 7105146336
[2026-04-22 00:25:34] 2026-04-21 22:24:39,319 | INFO     | task id: 49820375
[2026-04-22 00:25:34] 2026-04-21 22:24:39,319 | INFO     | errors: (none)
[2026-04-22 00:25:34] 2026-04-21 22:24:39,319 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-22 00:25:34] 2026-04-21 22:24:39,319 | INFO     | pilot state: finished 
[2026-04-22 00:25:34] 2026-04-21 22:24:39,320 | INFO     | transexitcode: 0
[2026-04-22 00:25:34] 2026-04-21 22:24:39,320 | INFO     | exeerrorcode: 0
[2026-04-22 00:25:34] 2026-04-21 22:24:39,320 | INFO     | exeerrordiag: 
[2026-04-22 00:25:34] 2026-04-21 22:24:39,320 | INFO     | exitcode: 0
[2026-04-22 00:25:34] 2026-04-21 22:24:39,320 | INFO     | exitmsg: OK
[2026-04-22 00:25:34] 2026-04-21 22:24:39,320 | INFO     | cpuconsumptiontime: 89203 s
[2026-04-22 00:25:34] 2026-04-21 22:24:39,320 | INFO     | nevents: 400
[2026-04-22 00:25:34] 2026-04-21 22:24:39,320 | INFO     | neventsw: 0
[2026-04-22 00:25:34] 2026-04-21 22:24:39,320 | INFO     | pid: 5875
[2026-04-22 00:25:34] 2026-04-21 22:24:39,321 | INFO     | pgrp: 5875
[2026-04-22 00:25:34] 2026-04-21 22:24:39,321 | INFO     | corecount: 8
[2026-04-22 00:25:34] 2026-04-21 22:24:39,321 | INFO     | event service: False
[2026-04-22 00:25:34] 2026-04-21 22:24:39,321 | INFO     | sizes: {0: 2274840, 1: 2276414, 11: 2276442, 21633: 2310339, 21637: 2319337, 21639: 2319393, 21642: 2319715}
[2026-04-22 00:25:34] 2026-04-21 22:24:39,321 | INFO     | --------------------------------------------------
[2026-04-22 00:25:34] 2026-04-21 22:24:39,321 | INFO     | 
[2026-04-22 00:25:34] 2026-04-21 22:24:39,321 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-04-22 00:25:34] 2026-04-21 22:24:39,939 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-22 00:25:34] 2026-04-21 22:24:39,939 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-22 00:25:34] 2026-04-21 22:24:39,939 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-22 00:25:34] 2026-04-21 22:24:39,939 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-22 00:25:34] 2026-04-21 22:24:39,939 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-22 00:25:34] 2026-04-21 22:24:39,939 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-22 00:25:34] 2026-04-21 22:24:39,939 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-22 00:25:34] 2026-04-21 22:24:39,939 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-22 00:25:34] 2026-04-21 22:24:39,940 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-22 00:25:34] 2026-04-21 22:24:39,940 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-22 00:25:34] 2026-04-21 22:24:39,940 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-22 00:25:34] 2026-04-21 22:24:39,940 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-22 00:25:34] 2026-04-21 22:24:39,940 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-22 00:25:34] 2026-04-21 22:24:39,940 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-22 00:25:34] 2026-04-21 22:24:39,940 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-22 00:25:34] 2026-04-21 22:24:39,940 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-22 00:25:34] 2026-04-21 22:24:39,940 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-22 00:25:34] 2026-04-21 22:24:39,940 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-22 00:25:34] 2026-04-21 22:24:39,940 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-22 00:25:34] 2026-04-21 22:24:39,940 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-22 00:25:34] 2026-04-21 22:24:39,940 | INFO     | job 7105146336 has completed (purged errors)
[2026-04-22 00:25:34] 2026-04-21 22:24:39,940 | INFO     | overall cleanup function is called
[2026-04-22 00:25:34] 2026-04-21 22:24:40,948 | INFO     | --- collectZombieJob: --- 10, [5875]
[2026-04-22 00:25:34] 2026-04-21 22:24:40,949 | INFO     | zombie collector waiting for pid 5875
[2026-04-22 00:25:34] 2026-04-21 22:24:40,949 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-22 00:25:34] 2026-04-21 22:24:40,949 | INFO     | collected zombie processes
[2026-04-22 00:25:34] 2026-04-21 22:24:40,949 | INFO     | will attempt to kill all subprocesses of pid=5875
[2026-04-22 00:25:34] 2026-04-21 22:24:40,992 | INFO     | process IDs to be killed: [5875] (in reverse order)
[2026-04-22 00:25:34] 2026-04-21 22:24:41,900 | WARNING  | found no corresponding commands to process id(s)
[2026-04-22 00:25:34] 2026-04-21 22:24:41,900 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-22 00:25:34] 2026-04-21 22:24:41,902 | INFO     | did not find any defunct processes belonging to 5875
[2026-04-22 00:25:34] 2026-04-21 22:24:41,903 | INFO     | did not find any defunct processes belonging to 5875
[2026-04-22 00:25:34] 2026-04-21 22:24:41,903 | INFO     | Ready for new job
[2026-04-22 00:25:34] 2026-04-21 22:24:41,904 | INFO     | **************************************
[2026-04-22 00:25:34] 2026-04-21 22:24:41,904 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-22 00:25:34] 2026-04-21 22:24:41,904 | INFO     | **************************************
[2026-04-22 00:25:34] 2026-04-21 22:24:41,904 | INFO     | 
[2026-04-22 00:25:34] 2026-04-21 22:24:41,905 | INFO     | pilot is running in a VM
[2026-04-22 00:25:34] 2026-04-21 22:24:41,905 | INFO     | architecture information:
[2026-04-22 00:25:34] 2026-04-21 22:24:41,912 | INFO     | executing command: cat /etc/os-release
[2026-04-22 00:25:34] 2026-04-21 22:24:42,212 | INFO     | cat /etc/os-release:
[2026-04-22 00:25:34] NAME="CentOS Linux"
[2026-04-22 00:25:34] VERSION="7 (Core)"
[2026-04-22 00:25:34] ID="centos"
[2026-04-22 00:25:34] ID_LIKE="rhel fedora"
[2026-04-22 00:25:34] VERSION_ID="7"
[2026-04-22 00:25:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-22 00:25:34] ANSI_COLOR="0;31"
[2026-04-22 00:25:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-22 00:25:34] HOME_URL="https://www.centos.org/"
[2026-04-22 00:25:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-22 00:25:34] 
[2026-04-22 00:25:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-22 00:25:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-22 00:25:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-22 00:25:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-22 00:25:34] 
[2026-04-22 00:25:34] 2026-04-21 22:24:42,212 | INFO     | **************************************
[2026-04-22 00:25:34] 2026-04-21 22:24:42,716 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-04-22 00:25:34] 2026-04-21 22:24:42,945 | INFO     | sufficient remaining disk space (490482958336 B)
[2026-04-22 00:25:34] 2026-04-21 22:24:42,945 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-22 00:25:34] 2026-04-21 22:24:42,946 | INFO     | current server update state: UPDATING_FINAL
[2026-04-22 00:25:34] 2026-04-21 22:24:42,946 | INFO     | update_server=False
[2026-04-22 00:25:34] 2026-04-21 22:24:42,946 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-22 00:25:34] 2026-04-21 22:24:42,951 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-22 00:25:34] 2026-04-21 22:24:43,039 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-22 00:25:34] 2026-04-21 22:24:43,054 | INFO     | all data control threads have been joined
[2026-04-22 00:25:34] 2026-04-21 22:24:43,394 | INFO     | all payload control threads have been joined
[2026-04-22 00:25:34] 2026-04-21 22:24:43,566 | INFO     | all job control threads have been joined
[2026-04-22 00:25:34] 2026-04-21 22:24:43,785 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-22 00:25:34] 2026-04-21 22:24:43,786 | INFO     | aborting loop
[2026-04-22 00:25:34] 2026-04-21 22:24:43,955 | INFO     | [job] retrieve thread has finished
[2026-04-22 00:25:34] 2026-04-21 22:24:44,032 | INFO     | [job] create_data_payload thread has finished
[2026-04-22 00:25:34] 2026-04-21 22:24:44,064 | INFO     | [data] control thread has finished
[2026-04-22 00:25:34] 2026-04-21 22:24:44,163 | INFO     | [payload] failed_post thread has finished
[2026-04-22 00:25:34] 2026-04-21 22:24:44,230 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-22 00:25:34] 2026-04-21 22:24:44,249 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-22 00:25:34] 2026-04-21 22:24:44,401 | INFO     | [payload] control thread has finished
[2026-04-22 00:25:34] 2026-04-21 22:24:44,573 | INFO     | [job] control thread has finished
[2026-04-22 00:25:34] 2026-04-21 22:24:44,792 | INFO     | [job] job monitor thread has finished
[2026-04-22 00:25:34] 2026-04-21 22:24:44,821 | INFO     | [data] copytool_in thread has finished
[2026-04-22 00:25:34] 2026-04-21 22:24:44,832 | INFO     | [payload] validate_post thread has finished
[2026-04-22 00:25:34] 2026-04-21 22:24:44,892 | INFO     | [payload] validate_pre thread has finished
[2026-04-22 00:25:34] 2026-04-21 22:24:44,895 | INFO     | [job] validate thread has finished
[2026-04-22 00:25:34] 2026-04-21 22:24:45,047 | INFO     | [data] copytool_out thread has finished
[2026-04-22 00:25:34] 2026-04-21 22:24:45,067 | INFO     | [payload] execute_payloads thread has finished
[2026-04-22 00:25:34] 2026-04-21 22:24:45,237 | INFO     | [job] queue monitor thread has finished
[2026-04-22 00:25:34] 2026-04-21 22:24:46,960 | INFO     | [data] queue_monitor thread has finished
[2026-04-22 00:25:34] 2026-04-21 22:25:11,696 | INFO     | PID=1158 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-04-22 00:25:34] 2026-04-21 22:25:11,696 | INFO     | .. there are 2 such processes running
[2026-04-22 00:25:34] 2026-04-21 22:25:11,696 | INFO     | found 0 job(s) in 20 queues
[2026-04-22 00:25:34] 2026-04-21 22:25:11,696 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-22 00:25:34] 2026-04-21 22:25:11,696 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-22 00:25:34] 2026-04-21 22:25:23,412 | INFO     | [monitor] cgroup control has ended
[2026-04-22 00:25:34] 2026-04-21 22:25:23,525 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139652741281600)>', '<ExcThread(monitor, started 139651910190848)>']
[2026-04-22 00:25:34] 2026-04-21 22:25:23,767 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-22 00:25:34] 2026-04-21 22:25:23,768 | INFO     | [monitor] control thread has ended
[2026-04-22 00:25:34] 2026-04-21 22:25:28,550 | INFO     | all workflow threads have been joined
[2026-04-22 00:25:34] 2026-04-21 22:25:28,551 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-22 00:25:34] 2026-04-21 22:25:28,551 | INFO     | traces error code: 0
[2026-04-22 00:25:34] 2026-04-21 22:25:28,551 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-22 00:25:34] 2026-04-21 22:25:28,919 [wrapper] ==== pilot stdout END ====
[2026-04-22 00:25:34] 2026-04-21 22:25:29,030 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-22 00:25:34] 2026-04-21 22:25:29,129 [wrapper] pilotpid: 1158
[2026-04-22 00:25:34] 2026-04-21 22:25:29,209 [wrapper] Pilot exit status: 0
[2026-04-22 00:25:34] 2026-04-21 22:25:29,687 [wrapper] pandaids: 7105146336
[2026-04-22 00:25:34] 2026-04-21 22:25:30,957 [wrapper] cleanup supervisor_pilot 26179 1159
[2026-04-22 00:25:34] 2026-04-21 22:25:31,059 [wrapper] Test setup, not cleaning
[2026-04-22 00:25:34] 2026-04-21 22:25:31,141 [wrapper] apfmon messages muted
[2026-04-22 00:25:34] 2026-04-21 22:25:31,227 [wrapper] ==== wrapper stdout END ====
[2026-04-22 00:25:34] 2026-04-21 22:25:31,330 [wrapper] ==== wrapper stderr END ====
[2026-04-22 00:25:34]  *** Error codes and diagnostics ***
[2026-04-22 00:25:34]     "exeErrorCode": 0,
[2026-04-22 00:25:34]     "pilotErrorCode": 0,
[2026-04-22 00:25:34]  *** Listing of results directory ***
[2026-04-22 00:25:34] total 2441860
[2026-04-22 00:25:34] -rwx------. 1 boinc boinc      36322 Apr 21 09:50 runpilot2-wrapper.sh
[2026-04-22 00:25:34] -rw-r--r--. 1 boinc boinc     644190 Apr 21 11:10 pilot3.tar.gz
[2026-04-22 00:25:34] -rw-r--r--. 1 boinc boinc       5094 Apr 21 11:22 queuedata.json
[2026-04-22 00:25:34] -rw-r--r--. 1 boinc boinc        100 Apr 21 18:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-22 00:25:34] -rwxr-xr-x. 1 boinc boinc       7986 Apr 21 18:23 run_atlas
[2026-04-22 00:25:34] -rw-r--r--. 1 boinc boinc        105 Apr 21 18:23 job.xml
[2026-04-22 00:25:34] -rw-r--r--. 1 boinc boinc       6305 Apr 21 18:23 init_data.xml
[2026-04-22 00:25:34] -rw-r--r--. 2 boinc boinc 2221852924 Apr 21 18:23 EVNT.49820373._000036.pool.root.1
[2026-04-22 00:25:34] -rw-r--r--. 2 boinc boinc      15665 Apr 21 18:23 start_atlas.sh
[2026-04-22 00:25:34] drwxrwx--x. 2 boinc boinc         68 Apr 21 18:23 shared
[2026-04-22 00:25:34] -rw-r--r--. 2 boinc boinc     656938 Apr 21 18:23 input.tar.gz
[2026-04-22 00:25:34] -rw-r--r--. 1 boinc boinc          0 Apr 21 18:23 boinc_lockfile
[2026-04-22 00:25:34] -rw-r--r--. 1 boinc boinc       2586 Apr 21 18:23 pandaJob.out
[2026-04-22 00:25:34] -rw-------. 1 boinc boinc     994990 Apr 21 18:23 agis_schedconf.cvmfs.json
[2026-04-22 00:25:34] -rw-------. 1 boinc boinc        415 Apr 21 18:23 workernode_map.json
[2026-04-22 00:25:34] drwx------. 5 boinc boinc       4096 Apr 21 18:23 pilot3
[2026-04-22 00:25:34] -rw-------. 1 boinc boinc  269389841 Apr 22 00:22 HITS.49820375._010108.pool.root.1
[2026-04-22 00:25:34] -rw-r--r--. 1 boinc boinc        489 Apr 22 00:23 boinc_task_state.xml
[2026-04-22 00:25:34] -rw-------. 1 boinc boinc       1032 Apr 22 00:24 memory_monitor_summary.json
[2026-04-22 00:25:34] -rw-------. 1 boinc boinc    1509089 Apr 22 00:24 agis_ddmendpoints.agis.ALL.json
[2026-04-22 00:25:34] -rw-------. 1 boinc boinc     622822 Apr 22 00:24 log.49820375._010108.job.log.tgz.1
[2026-04-22 00:25:34] -rw-------. 1 boinc boinc       6339 Apr 22 00:24 heartbeat_new.json
[2026-04-22 00:25:34] -rw-------. 1 boinc boinc       6230 Apr 22 00:24 heartbeat.json
[2026-04-22 00:25:34] -rw-------. 1 boinc boinc         95 Apr 22 00:24 pilot_heartbeat.json
[2026-04-22 00:25:34] -rw-r--r--. 1 boinc boinc       8192 Apr 22 00:25 boinc_mmap_file
[2026-04-22 00:25:34] -rw-r--r--. 1 boinc boinc         28 Apr 22 00:25 wrapper_checkpoint.txt
[2026-04-22 00:25:34] -rw-------. 1 boinc boinc       4878 Apr 22 00:25 pilotlog.txt
[2026-04-22 00:25:34] -rw-------. 1 boinc boinc    1965915 Apr 22 00:25 log.49820375._010108.job.log.1
[2026-04-22 00:25:34] -rw-------. 1 boinc boinc        357 Apr 22 00:25 output.list
[2026-04-22 00:25:34] -rw-r--r--. 1 boinc boinc        410 Apr 22 00:25 runtime_log
[2026-04-22 00:25:34] -rw-------. 1 boinc boinc    2611200 Apr 22 00:25 result.tar.gz
[2026-04-22 00:25:34] -rw-r--r--. 1 boinc boinc       8438 Apr 22 00:25 runtime_log.err
[2026-04-22 00:25:34] -rw-------. 1 boinc boinc        656 Apr 22 00:25 2c2e26633cd6.diag
[2026-04-22 00:25:34] -rw-r--r--. 1 boinc boinc      20569 Apr 22 00:25 stderr.txt
[2026-04-22 00:25:34] HITS file was successfully produced:
[2026-04-22 00:25:34] -rw-------. 1 boinc boinc 269389841 Apr 22 00:22 shared/HITS.pool.root.1
[2026-04-22 00:25:34]  *** Contents of shared directory: ***
[2026-04-22 00:25:34] total 2436072
[2026-04-22 00:25:34] -rw-r--r--. 2 boinc boinc 2221852924 Apr 21 18:23 ATLAS.root_0
[2026-04-22 00:25:34] -rw-r--r--. 2 boinc boinc      15665 Apr 21 18:23 start_atlas.sh
[2026-04-22 00:25:34] -rw-r--r--. 2 boinc boinc     656938 Apr 21 18:23 input.tar.gz
[2026-04-22 00:25:34] -rw-------. 1 boinc boinc  269389841 Apr 22 00:22 HITS.pool.root.1
[2026-04-22 00:25:34] -rw-------. 1 boinc boinc    2611200 Apr 22 00:25 result.tar.gz
00:25:36 (29368): run_atlas exited; CPU time 89394.335085
00:25:36 (29368): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN