Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:40:40 (3670901): wrapper (7.7.26015): starting
07:40:40 (3670901): wrapper: running run_atlas (--nthreads 8)
[2026-04-21 07:40:41] Arguments: --nthreads 8
[2026-04-21 07:40:41] Threads: 8
[2026-04-21 07:40:41] Checking for CVMFS
[2026-04-21 07:40:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-21 07:40:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-21 07:40:41] Running cvmfs_config stat atlas.cern.ch
[2026-04-21 07:40:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-21 07:40:43] 2.13.3.0 12563 169742 246364 158689 0 373 24544790 40960000 19548 16776704 0 354738920 99.654 314419310 34891 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-21 07:40:43] CVMFS is ok
[2026-04-21 07:40:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 07:40:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 07:40:43] Further information can be found at the LHC@home message board.
[2026-04-21 07:40:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 07:40:43] Checking for apptainer binary...
[2026-04-21 07:40:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-21 07:40:43] Running /usr/bin/apptainer --version
[2026-04-21 07:40:43] apptainer version 1.4.5-2.el9
[2026-04-21 07:40:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 07:40:43] c-211-33-3.aglt2.org
[2026-04-21 07:40:43] apptainer works
[2026-04-21 07:40:43] Set ATHENA_PROC_NUMBER=8
[2026-04-21 07:40:43] Set ATHENA_CORE_NUMBER=8
[2026-04-21 07:40:44] Starting ATLAS job with PandaID=7105104765
[2026-04-21 07:40:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-21 12:44:02]  *** The last 200 lines of the pilot log: ***
[2026-04-21 12:44:03] 2026-04-21 16:43:07,124 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-7105104765/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 12:44:03] 2026-04-21 16:43:07,463 | INFO     | number of running child processes to parent process 3688238: 1
[2026-04-21 12:44:03] 2026-04-21 16:43:07,464 | INFO     | maximum number of monitored processes: 6
[2026-04-21 12:44:03] 2026-04-21 16:43:07,651 | INFO     | job 7105104765 has state=finished
[2026-04-21 12:44:03] 2026-04-21 16:43:07,651 | INFO     | preparing for final server update for job 7105104765 in state='finished'
[2026-04-21 12:44:03] 2026-04-21 16:43:07,651 | INFO     | reading metadata from: /tmp/boinchome/slots/5/PanDA_Pilot-7105104765/jobReport.json
[2026-04-21 12:44:03] 2026-04-21 16:43:07,653 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/5/workernode_map.json
[2026-04-21 12:44:03] 2026-04-21 16:43:07,654 | INFO     | this job has now completed (state=finished)
[2026-04-21 12:44:03] 2026-04-21 16:43:07,654 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-21 12:44:03] 2026-04-21 16:43:07,654 | INFO     | log transfer has been attempted: DONE
[2026-04-21 12:44:03] 2026-04-21 16:43:07,654 | INFO     | job 7105104765 has finished - writing final server update
[2026-04-21 12:44:03] 2026-04-21 16:43:07,654 | INFO     | total number of processed events: 400 (read)
[2026-04-21 12:44:03] 2026-04-21 16:43:07,670 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-7105104765/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 12:44:03] 2026-04-21 16:43:07,671 | INFO     | extracted standard info from prmon json
[2026-04-21 12:44:03] 2026-04-21 16:43:07,671 | INFO     | extracted standard memory fields from prmon json
[2026-04-21 12:44:03] 2026-04-21 16:43:07,672 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-21 12:44:03] 2026-04-21 16:43:07,672 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-21 12:44:03] 2026-04-21 16:43:07,677 | INFO     | fitting pss+swap vs Time
[2026-04-21 12:44:03] 2026-04-21 16:43:07,677 | INFO     | sum of square deviations: 7960131284.305067
[2026-04-21 12:44:03] 2026-04-21 16:43:07,679 | INFO     | sum of deviations: 46629483074.32204
[2026-04-21 12:44:03] 2026-04-21 16:43:07,680 | INFO     | mean x (centered): 0.0
[2026-04-21 12:44:03] 2026-04-21 16:43:07,680 | INFO     | mean y: 2567381.7084745765
[2026-04-21 12:44:03] 2026-04-21 16:43:07,680 | INFO     | intersect: 2567381.7084745765
[2026-04-21 12:44:03] 2026-04-21 16:43:07,680 | INFO     | chi2: 2.263798282867324
[2026-04-21 12:44:03] 2026-04-21 16:43:07,681 | INFO     | sum of square deviations: 7562186284.979337
[2026-04-21 12:44:03] 2026-04-21 16:43:07,683 | INFO     | sum of deviations: 44969390315.43448
[2026-04-21 12:44:03] 2026-04-21 16:43:07,683 | INFO     | mean x (centered): 0.0
[2026-04-21 12:44:03] 2026-04-21 16:43:07,683 | INFO     | mean y: 2566747.7793103447
[2026-04-21 12:44:03] 2026-04-21 16:43:07,683 | INFO     | intersect: 2566747.7793103447
[2026-04-21 12:44:03] 2026-04-21 16:43:07,683 | INFO     | chi2: 2.2642220837345675
[2026-04-21 12:44:03] 2026-04-21 16:43:07,684 | INFO     | current chi2=2.2642220837345675 (change=-0.01872078755649844 %)
[2026-04-21 12:44:03] 2026-04-21 16:43:07,684 | INFO     | right removable region: 289
[2026-04-21 12:44:03] 2026-04-21 16:43:07,684 | INFO     | sum of square deviations: 7562155236.431004
[2026-04-21 12:44:03] 2026-04-21 16:43:07,686 | INFO     | sum of deviations: -14611241722.56896
[2026-04-21 12:44:03] 2026-04-21 16:43:07,686 | INFO     | mean x (centered): 0.0
[2026-04-21 12:44:03] 2026-04-21 16:43:07,686 | INFO     | mean y: 2590713.175862069
[2026-04-21 12:44:03] 2026-04-21 16:43:07,686 | INFO     | intersect: 2590713.175862069
[2026-04-21 12:44:03] 2026-04-21 16:43:07,687 | INFO     | chi2: 0.24137194526656264
[2026-04-21 12:44:03] 2026-04-21 16:43:07,687 | INFO     | current chi2=0.24137194526656264 (change=89.33774501494712 %)
[2026-04-21 12:44:03] 2026-04-21 16:43:07,687 | INFO     | sum of square deviations: 7177703190.652628
[2026-04-21 12:44:03] 2026-04-21 16:43:07,689 | INFO     | sum of deviations: -18619948610.547344
[2026-04-21 12:44:03] 2026-04-21 16:43:07,689 | INFO     | mean x (centered): 0.0
[2026-04-21 12:44:03] 2026-04-21 16:43:07,690 | INFO     | mean y: 2592291.6736842105
[2026-04-21 12:44:03] 2026-04-21 16:43:07,690 | INFO     | intersect: 2592291.6736842105
[2026-04-21 12:44:03] 2026-04-21 16:43:07,690 | INFO     | chi2: 0.2260798729073284
[2026-04-21 12:44:03] 2026-04-21 16:43:07,690 | INFO     | current chi2=0.2260798729073284 (change=6.335480431392397 %)
[2026-04-21 12:44:03] 2026-04-21 16:43:07,690 | INFO     | left removable region: 10
[2026-04-21 12:44:03] 2026-04-21 16:43:07,691 | INFO     | sum of square deviations: 6733836445.749089
[2026-04-21 12:44:03] 2026-04-21 16:43:07,693 | INFO     | sum of deviations: -19158256211.20071
[2026-04-21 12:44:03] 2026-04-21 16:43:07,693 | INFO     | mean x (centered): 0.0
[2026-04-21 12:44:03] 2026-04-21 16:43:07,693 | INFO     | mean y: 2592072.8207885306
[2026-04-21 12:44:03] 2026-04-21 16:43:07,693 | INFO     | intersect: 2592072.8207885306
[2026-04-21 12:44:03] 2026-04-21 16:43:07,693 | INFO     | chi2: 0.22458613214864295
[2026-04-21 12:44:03] 2026-04-21 16:43:07,693 | INFO     | current memory leak: -2.85 B/s (using 279 data points, chi2=0.22)
[2026-04-21 12:44:03] 2026-04-21 16:43:07,694 | INFO     | could have reported an average CPU frequency of 2599 MHz (13 samples)
[2026-04-21 12:44:03] 2026-04-21 16:43:07,694 | INFO     | ..............................
[2026-04-21 12:44:03] 2026-04-21 16:43:07,694 | INFO     | . Timing measurements:
[2026-04-21 12:44:03] 2026-04-21 16:43:07,694 | INFO     | . get job = 0 s
[2026-04-21 12:44:03] 2026-04-21 16:43:07,694 | INFO     | . initial setup = 30 s
[2026-04-21 12:44:03] 2026-04-21 16:43:07,695 | INFO     | . payload setup = 38 s
[2026-04-21 12:44:03] 2026-04-21 16:43:07,695 | INFO     | . stage-in = 0 s
[2026-04-21 12:44:03] 2026-04-21 16:43:07,695 | INFO     | . payload execution = 18001 s
[2026-04-21 12:44:03] 2026-04-21 16:43:07,695 | INFO     | . stage-out = 2 s
[2026-04-21 12:44:03] 2026-04-21 16:43:07,695 | INFO     | . log creation = 0 s
[2026-04-21 12:44:03] 2026-04-21 16:43:07,695 | INFO     | ..............................
[2026-04-21 12:44:03] 2026-04-21 16:43:07,903 | INFO     | 
[2026-04-21 12:44:03] 2026-04-21 16:43:07,904 | INFO     | job summary report
[2026-04-21 12:44:03] 2026-04-21 16:43:07,904 | INFO     | --------------------------------------------------
[2026-04-21 12:44:03] 2026-04-21 16:43:07,904 | INFO     | PanDA job id: 7105104765
[2026-04-21 12:44:03] 2026-04-21 16:43:07,904 | INFO     | task id: 49820375
[2026-04-21 12:44:03] 2026-04-21 16:43:07,904 | INFO     | errors: (none)
[2026-04-21 12:44:03] 2026-04-21 16:43:07,904 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-21 12:44:03] 2026-04-21 16:43:07,904 | INFO     | pilot state: finished 
[2026-04-21 12:44:03] 2026-04-21 16:43:07,904 | INFO     | transexitcode: 0
[2026-04-21 12:44:03] 2026-04-21 16:43:07,904 | INFO     | exeerrorcode: 0
[2026-04-21 12:44:03] 2026-04-21 16:43:07,904 | INFO     | exeerrordiag: 
[2026-04-21 12:44:03] 2026-04-21 16:43:07,905 | INFO     | exitcode: 0
[2026-04-21 12:44:03] 2026-04-21 16:43:07,905 | INFO     | exitmsg: OK
[2026-04-21 12:44:03] 2026-04-21 16:43:07,905 | INFO     | cpuconsumptiontime: 75164 s
[2026-04-21 12:44:03] 2026-04-21 16:43:07,905 | INFO     | nevents: 400
[2026-04-21 12:44:03] 2026-04-21 16:43:07,905 | INFO     | neventsw: 0
[2026-04-21 12:44:03] 2026-04-21 16:43:07,905 | INFO     | pid: 3688238
[2026-04-21 12:44:03] 2026-04-21 16:43:07,905 | INFO     | pgrp: 3688238
[2026-04-21 12:44:03] 2026-04-21 16:43:07,905 | INFO     | corecount: 8
[2026-04-21 12:44:03] 2026-04-21 16:43:07,905 | INFO     | event service: False
[2026-04-21 12:44:03] 2026-04-21 16:43:07,905 | INFO     | sizes: {0: 2280934, 1: 2281619, 2: 2283448, 3: 2283448, 18044: 2315804, 18046: 2317824, 18049: 2318008, 18051: 2318202}
[2026-04-21 12:44:03] 2026-04-21 16:43:07,905 | INFO     | --------------------------------------------------
[2026-04-21 12:44:03] 2026-04-21 16:43:07,905 | INFO     | 
[2026-04-21 12:44:03] 2026-04-21 16:43:07,905 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-04-21 12:44:03] 2026-04-21 16:43:07,928 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-21 12:44:03] 2026-04-21 16:43:07,928 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-21 12:44:03] 2026-04-21 16:43:07,928 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-21 12:44:03] 2026-04-21 16:43:07,928 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-21 12:44:03] 2026-04-21 16:43:07,928 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-21 12:44:03] 2026-04-21 16:43:07,928 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-21 12:44:03] 2026-04-21 16:43:07,928 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-21 12:44:03] 2026-04-21 16:43:07,928 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-21 12:44:03] 2026-04-21 16:43:07,929 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-21 12:44:03] 2026-04-21 16:43:07,929 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-21 12:44:03] 2026-04-21 16:43:07,929 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-21 12:44:03] 2026-04-21 16:43:07,929 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-21 12:44:03] 2026-04-21 16:43:07,929 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-21 12:44:03] 2026-04-21 16:43:07,929 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-21 12:44:03] 2026-04-21 16:43:07,929 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-21 12:44:03] 2026-04-21 16:43:07,929 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-21 12:44:03] 2026-04-21 16:43:07,929 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-21 12:44:03] 2026-04-21 16:43:07,929 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-21 12:44:03] 2026-04-21 16:43:07,929 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-21 12:44:03] 2026-04-21 16:43:07,929 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-21 12:44:03] 2026-04-21 16:43:07,929 | INFO     | job 7105104765 has completed (purged errors)
[2026-04-21 12:44:03] 2026-04-21 16:43:07,930 | INFO     | overall cleanup function is called
[2026-04-21 12:44:03] 2026-04-21 16:43:08,939 | INFO     | --- collectZombieJob: --- 10, [3688238]
[2026-04-21 12:44:03] 2026-04-21 16:43:08,939 | INFO     | zombie collector waiting for pid 3688238
[2026-04-21 12:44:03] 2026-04-21 16:43:08,939 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-21 12:44:03] 2026-04-21 16:43:08,939 | INFO     | collected zombie processes
[2026-04-21 12:44:03] 2026-04-21 16:43:08,939 | INFO     | will attempt to kill all subprocesses of pid=3688238
[2026-04-21 12:44:03] 2026-04-21 16:43:09,281 | INFO     | process IDs to be killed: [3688238] (in reverse order)
[2026-04-21 12:44:03] 2026-04-21 16:43:09,398 | WARNING  | found no corresponding commands to process id(s)
[2026-04-21 12:44:03] 2026-04-21 16:43:09,399 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-21 12:44:03] 2026-04-21 16:43:09,413 | INFO     | did not find any defunct processes belonging to 3688238
[2026-04-21 12:44:03] 2026-04-21 16:43:09,426 | INFO     | did not find any defunct processes belonging to 3688238
[2026-04-21 12:44:03] 2026-04-21 16:43:09,427 | INFO     | Ready for new job
[2026-04-21 12:44:03] 2026-04-21 16:43:09,429 | INFO     | **************************************
[2026-04-21 12:44:03] 2026-04-21 16:43:09,429 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-21 12:44:03] 2026-04-21 16:43:09,429 | INFO     | **************************************
[2026-04-21 12:44:03] 2026-04-21 16:43:09,429 | INFO     | 
[2026-04-21 12:44:03] 2026-04-21 16:43:09,435 | INFO     | architecture information:
[2026-04-21 12:44:03] 2026-04-21 16:43:09,435 | INFO     | executing command: cat /etc/os-release
[2026-04-21 12:44:03] 2026-04-21 16:43:09,454 | INFO     | cat /etc/os-release:
[2026-04-21 12:44:03] NAME="CentOS Linux"
[2026-04-21 12:44:03] VERSION="7 (Core)"
[2026-04-21 12:44:03] ID="centos"
[2026-04-21 12:44:03] ID_LIKE="rhel fedora"
[2026-04-21 12:44:03] VERSION_ID="7"
[2026-04-21 12:44:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-21 12:44:03] ANSI_COLOR="0;31"
[2026-04-21 12:44:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-21 12:44:03] HOME_URL="https://www.centos.org/"
[2026-04-21 12:44:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-21 12:44:03] 
[2026-04-21 12:44:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-21 12:44:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-21 12:44:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-21 12:44:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-21 12:44:03] 
[2026-04-21 12:44:03] 2026-04-21 16:43:09,455 | INFO     | **************************************
[2026-04-21 12:44:03] 2026-04-21 16:43:09,958 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-04-21 12:44:03] 2026-04-21 16:43:09,979 | INFO     | sufficient remaining disk space (120918638592 B)
[2026-04-21 12:44:03] 2026-04-21 16:43:09,979 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-21 12:44:03] 2026-04-21 16:43:09,979 | INFO     | current server update state: UPDATING_FINAL
[2026-04-21 12:44:03] 2026-04-21 16:43:09,979 | INFO     | update_server=False
[2026-04-21 12:44:03] 2026-04-21 16:43:09,979 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-21 12:44:03] 2026-04-21 16:43:10,572 | INFO     | all payload control threads have been joined
[2026-04-21 12:44:03] 2026-04-21 16:43:10,650 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-21 12:44:03] 2026-04-21 16:43:10,960 | INFO     | all data control threads have been joined
[2026-04-21 12:44:03] 2026-04-21 16:43:10,973 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-21 12:44:03] 2026-04-21 16:43:10,973 | INFO     | aborting loop
[2026-04-21 12:44:03] 2026-04-21 16:43:10,985 | INFO     | [job] retrieve thread has finished
[2026-04-21 12:44:03] 2026-04-21 16:43:11,203 | INFO     | all job control threads have been joined
[2026-04-21 12:44:03] 2026-04-21 16:43:11,234 | INFO     | [job] create_data_payload thread has finished
[2026-04-21 12:44:03] 2026-04-21 16:43:11,578 | INFO     | [payload] control thread has finished
[2026-04-21 12:44:03] 2026-04-21 16:43:11,759 | INFO     | [payload] execute_payloads thread has finished
[2026-04-21 12:44:03] 2026-04-21 16:43:11,782 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-21 12:44:03] 2026-04-21 16:43:11,965 | INFO     | [data] control thread has finished
[2026-04-21 12:44:03] 2026-04-21 16:43:11,979 | INFO     | [job] job monitor thread has finished
[2026-04-21 12:44:03] 2026-04-21 16:43:12,073 | INFO     | [payload] failed_post thread has finished
[2026-04-21 12:44:03] 2026-04-21 16:43:12,149 | INFO     | [job] validate thread has finished
[2026-04-21 12:44:03] 2026-04-21 16:43:12,209 | INFO     | [job] control thread has finished
[2026-04-21 12:44:03] 2026-04-21 16:43:12,293 | INFO     | [data] copytool_in thread has finished
[2026-04-21 12:44:03] 2026-04-21 16:43:12,311 | INFO     | [payload] validate_pre thread has finished
[2026-04-21 12:44:03] 2026-04-21 16:43:12,574 | INFO     | [payload] validate_post thread has finished
[2026-04-21 12:44:03] 2026-04-21 16:43:12,658 | INFO     | [data] copytool_out thread has finished
[2026-04-21 12:44:03] 2026-04-21 16:43:12,806 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-21 12:44:03] 2026-04-21 16:43:13,812 | INFO     | [job] queue monitor thread has finished
[2026-04-21 12:44:03] 2026-04-21 16:43:15,791 | INFO     | [data] queue_monitor thread has finished
[2026-04-21 12:44:03] 2026-04-21 16:43:20,698 | INFO     | job.realtimelogging is not enabled
[2026-04-21 12:44:03] 2026-04-21 16:43:21,704 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-21 12:44:03] 2026-04-21 16:43:41,380 | INFO     | PID=3675351 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-21 12:44:03] 2026-04-21 16:43:41,380 | INFO     | .. there are 13 such processes running
[2026-04-21 12:44:03] 2026-04-21 16:43:41,380 | INFO     | found 0 job(s) in 20 queues
[2026-04-21 12:44:03] 2026-04-21 16:43:41,380 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-21 12:44:03] 2026-04-21 16:43:41,380 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-21 12:44:03] 2026-04-21 16:43:43,905 | INFO     | [monitor] cgroup control has ended
[2026-04-21 12:44:03] 2026-04-21 16:43:44,527 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140637716764480)>', '<ExcThread(monitor, started 140637336749824)>']
[2026-04-21 12:44:03] 2026-04-21 16:43:45,401 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-21 12:44:03] 2026-04-21 16:43:45,401 | INFO     | [monitor] control thread has ended
[2026-04-21 12:44:03] 2026-04-21 16:43:49,552 | INFO     | all workflow threads have been joined
[2026-04-21 12:44:03] 2026-04-21 16:43:49,553 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-21 12:44:03] 2026-04-21 16:43:49,553 | INFO     | traces error code: 0
[2026-04-21 12:44:03] 2026-04-21 16:43:49,554 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-21 12:44:03] 2026-04-21 16:43:49,795 [wrapper] ==== pilot stdout END ====
[2026-04-21 12:44:03] 2026-04-21 16:43:49,797 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-21 12:44:03] 2026-04-21 16:43:49,800 [wrapper] pilotpid: 3675351
[2026-04-21 12:44:03] 2026-04-21 16:43:49,803 [wrapper] Pilot exit status: 0
[2026-04-21 12:44:03] 2026-04-21 16:43:49,811 [wrapper] pandaids: 7105104765
[2026-04-21 12:44:03] 2026-04-21 16:43:49,888 [wrapper] cleanup supervisor_pilot  123064 3675352
[2026-04-21 12:44:03] 2026-04-21 16:43:49,892 [wrapper] Test setup, not cleaning
[2026-04-21 12:44:03] 2026-04-21 16:43:49,895 [wrapper] apfmon messages muted
[2026-04-21 12:44:03] 2026-04-21 16:43:49,898 [wrapper] ==== wrapper stdout END ====
[2026-04-21 12:44:03] 2026-04-21 16:43:49,900 [wrapper] ==== wrapper stderr END ====
[2026-04-21 12:44:03]  *** Error codes and diagnostics ***
[2026-04-21 12:44:03]     "exeErrorCode": 0,
[2026-04-21 12:44:03]     "pilotErrorCode": 0,
[2026-04-21 12:44:03]  *** Listing of results directory ***
[2026-04-21 12:44:03] total 2466408
[2026-04-21 12:44:03] -rwx------. 1 boincer umatlas      36322 Apr 21 03:50 runpilot2-wrapper.sh
[2026-04-21 12:44:03] -rw-r--r--. 1 boincer umatlas     644190 Apr 21 05:10 pilot3.tar.gz
[2026-04-21 12:44:03] -rw-r--r--. 1 boincer umatlas       5094 Apr 21 05:22 queuedata.json
[2026-04-21 12:44:03] -rw-r--r--. 1 boincer umatlas        100 Apr 21 07:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-21 12:44:03] -rwxr-xr-x. 1 boincer umatlas       7986 Apr 21 07:40 run_atlas
[2026-04-21 12:44:03] -rw-r--r--. 1 boincer umatlas        105 Apr 21 07:40 job.xml
[2026-04-21 12:44:03] -rw-r--r--. 2 boincer umatlas 2242832474 Apr 21 07:40 EVNT.49820373._000022.pool.root.1
[2026-04-21 12:44:03] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 07:40 start_atlas.sh
[2026-04-21 12:44:03] drwxrwx--x. 2 boincer umatlas       4096 Apr 21 07:40 shared
[2026-04-21 12:44:03] -rw-r--r--. 2 boincer umatlas     656939 Apr 21 07:40 input.tar.gz
[2026-04-21 12:44:03] -rw-r--r--. 1 boincer umatlas          0 Apr 21 07:40 boinc_lockfile
[2026-04-21 12:44:03] -rw-r--r--. 1 boincer umatlas       2586 Apr 21 07:40 pandaJob.out
[2026-04-21 12:44:03] -rw-------. 1 boincer umatlas         57 Apr 21 07:40 setup.sh.local
[2026-04-21 12:44:03] -rw-------. 1 boincer umatlas     995866 Apr 21 07:41 agis_schedconf.cvmfs.json
[2026-04-21 12:44:03] -rw-------. 1 boincer umatlas        443 Apr 21 07:42 workernode_map.json
[2026-04-21 12:44:03] drwx------. 5 boincer umatlas       4096 Apr 21 07:42 pilot3
[2026-04-21 12:44:03] -rw-r--r--. 1 boincer umatlas       6776 Apr 21 12:38 init_data.xml
[2026-04-21 12:44:03] -rw-------. 1 boincer umatlas  274667421 Apr 21 12:42 HITS.49820375._010025.pool.root.1
[2026-04-21 12:44:03] -rw-r--r--. 1 boincer umatlas        489 Apr 21 12:42 boinc_task_state.xml
[2026-04-21 12:44:03] -rw-------. 1 boincer umatlas         95 Apr 21 12:42 pilot_heartbeat.json
[2026-04-21 12:44:03] -rw-------. 1 boincer umatlas       1052 Apr 21 12:42 memory_monitor_summary.json
[2026-04-21 12:44:03] -rw-------. 1 boincer umatlas    1509089 Apr 21 12:43 agis_ddmendpoints.agis.ALL.json
[2026-04-21 12:44:03] -rw-------. 1 boincer umatlas     489936 Apr 21 12:43 log.49820375._010025.job.log.tgz.1
[2026-04-21 12:44:03] -rw-------. 1 boincer umatlas       6428 Apr 21 12:43 heartbeat_new.json
[2026-04-21 12:44:03] -rw-------. 1 boincer umatlas       6319 Apr 21 12:43 heartbeat.json
[2026-04-21 12:44:03] -rw-------. 1 boincer umatlas       4892 Apr 21 12:43 pilotlog.txt
[2026-04-21 12:44:03] -rw-------. 1 boincer umatlas    1528438 Apr 21 12:43 log.49820375._010025.job.log.1
[2026-04-21 12:44:03] -rw-------. 1 boincer umatlas        357 Apr 21 12:43 output.list
[2026-04-21 12:44:03] -rw-r--r--. 1 boincer umatlas        410 Apr 21 12:43 runtime_log
[2026-04-21 12:44:03] -rw-------. 1 boincer umatlas    2037760 Apr 21 12:43 result.tar.gz
[2026-04-21 12:44:03] -rw-r--r--. 1 boincer umatlas       8974 Apr 21 12:43 runtime_log.err
[2026-04-21 12:44:03] -rw-------. 1 boincer umatlas        659 Apr 21 12:43 2c27c0bc3b15.diag
[2026-04-21 12:44:03] -rw-r--r--. 1 boincer umatlas         28 Apr 21 12:43 wrapper_checkpoint.txt
[2026-04-21 12:44:03] -rw-r--r--. 1 boincer umatlas       8192 Apr 21 12:44 boinc_mmap_file
[2026-04-21 12:44:03] -rw-r--r--. 1 boincer umatlas      21256 Apr 21 12:44 stderr.txt
[2026-04-21 12:44:03] HITS file was successfully produced:
[2026-04-21 12:44:03] -rw-------. 1 boincer umatlas 274667421 Apr 21 12:42 shared/HITS.pool.root.1
[2026-04-21 12:44:03]  *** Contents of shared directory: ***
[2026-04-21 12:44:03] total 2461160
[2026-04-21 12:44:03] -rw-r--r--. 2 boincer umatlas 2242832474 Apr 21 07:40 ATLAS.root_0
[2026-04-21 12:44:03] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 07:40 start_atlas.sh
[2026-04-21 12:44:03] -rw-r--r--. 2 boincer umatlas     656939 Apr 21 07:40 input.tar.gz
[2026-04-21 12:44:03] -rw-------. 1 boincer umatlas  274667421 Apr 21 12:42 HITS.pool.root.1
[2026-04-21 12:44:03] -rw-------. 1 boincer umatlas    2037760 Apr 21 12:43 result.tar.gz
12:44:05 (3670901): run_atlas exited; CPU time 75826.645360
12:44:05 (3670901): called boinc_finish(0)

</stderr_txt>
]]>

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