Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:48:59 (3935584): wrapper (7.7.26015): starting
10:48:59 (3935584): wrapper: running run_atlas (--nthreads 4)
[2026-04-22 10:48:59] Arguments: --nthreads 4
[2026-04-22 10:48:59] Threads: 4
[2026-04-22 10:48:59] Checking for CVMFS
[2026-04-22 10:48:59] No cvmfs_config command found, will try listing directly
[2026-04-22 10:48:59] CVMFS is ok
[2026-04-22 10:48:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-22 10:48:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-22 10:48:59] Further information can be found at the LHC@home message board.
[2026-04-22 10:48:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-22 10:48:59] Checking for apptainer binary...
[2026-04-22 10:48:59] which: no apptainer in ((null))
[2026-04-22 10:48:59] apptainer is not installed, using version from CVMFS
[2026-04-22 10:48:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-22 10:49:00] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2026-04-22 10:49:00] apptainer works
[2026-04-22 10:49:00] Set ATHENA_PROC_NUMBER=4
[2026-04-22 10:49:00] Set ATHENA_CORE_NUMBER=4
[2026-04-22 10:49:00] Starting ATLAS job with PandaID=7105104737
[2026-04-22 10:49:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-22 14:02:52]  *** The last 200 lines of the pilot log: ***
[2026-04-22 14:02:52] 2026-04-22 11:57:41,068 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot32/slots/0/workernode_map.json
[2026-04-22 14:02:52] 2026-04-22 11:57:41,068 | INFO     | this job has now completed (state=finished)
[2026-04-22 14:02:52] 2026-04-22 11:57:41,068 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-22 14:02:52] 2026-04-22 11:57:41,068 | INFO     | log transfer has been attempted: DONE
[2026-04-22 14:02:52] 2026-04-22 11:57:41,068 | INFO     | job 7105104737 has finished - writing final server update
[2026-04-22 14:02:52] 2026-04-22 11:57:41,069 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_4485/.job.ad'
[2026-04-22 14:02:52] 2026-04-22 11:57:41,069 | INFO     | total number of processed events: 400 (read)
[2026-04-22 14:02:52] 2026-04-22 11:57:41,080 | INFO     | using path: /var/lib/boinc/var/slot32/slots/0/PanDA_Pilot-7105104737/memory_monitor_summary.json (trf name=prmon)
[2026-04-22 14:02:52] 2026-04-22 11:57:41,081 | INFO     | extracted standard info from prmon json
[2026-04-22 14:02:52] 2026-04-22 11:57:41,081 | INFO     | extracted standard memory fields from prmon json
[2026-04-22 14:02:52] 2026-04-22 11:57:41,081 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-22 14:02:52] 2026-04-22 11:57:41,081 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-22 14:02:52] 2026-04-22 11:57:41,085 | INFO     | fitting pss+swap vs Time
[2026-04-22 14:02:52] 2026-04-22 11:57:41,085 | INFO     | sum of square deviations: 1963274020.0
[2026-04-22 14:02:52] 2026-04-22 11:57:41,086 | INFO     | sum of deviations: -27447269334.999992
[2026-04-22 14:02:52] 2026-04-22 11:57:41,086 | INFO     | mean x (centered): 0.0
[2026-04-22 14:02:52] 2026-04-22 11:57:41,086 | INFO     | mean y: 2437374.0432432434
[2026-04-22 14:02:52] 2026-04-22 11:57:41,086 | INFO     | intersect: 2437374.0432432434
[2026-04-22 14:02:52] 2026-04-22 11:57:41,087 | INFO     | chi2: 1.369733056029089
[2026-04-22 14:02:52] 2026-04-22 11:57:41,087 | INFO     | sum of square deviations: 1808350185.0
[2026-04-22 14:02:52] 2026-04-22 11:57:41,088 | INFO     | sum of deviations: -26431473514.499996
[2026-04-22 14:02:52] 2026-04-22 11:57:41,088 | INFO     | mean x (centered): 0.0
[2026-04-22 14:02:52] 2026-04-22 11:57:41,088 | INFO     | mean y: 2438374.472222222
[2026-04-22 14:02:52] 2026-04-22 11:57:41,088 | INFO     | intersect: 2438374.472222222
[2026-04-22 14:02:52] 2026-04-22 11:57:41,088 | INFO     | chi2: 1.3658673308360103
[2026-04-22 14:02:52] 2026-04-22 11:57:41,089 | INFO     | current chi2=1.3658673308360103 (change=0.2822247134989644 %)
[2026-04-22 14:02:52] 2026-04-22 11:57:41,089 | INFO     | right removable region: 179
[2026-04-22 14:02:52] 2026-04-22 11:57:41,089 | INFO     | sum of square deviations: 1808350185.0
[2026-04-22 14:02:52] 2026-04-22 11:57:41,090 | INFO     | sum of deviations: -40627978565.5
[2026-04-22 14:02:52] 2026-04-22 11:57:41,090 | INFO     | mean x (centered): 0.0
[2026-04-22 14:02:52] 2026-04-22 11:57:41,090 | INFO     | mean y: 2449997.8722222224
[2026-04-22 14:02:52] 2026-04-22 11:57:41,090 | INFO     | intersect: 2449997.8722222224
[2026-04-22 14:02:52] 2026-04-22 11:57:41,090 | INFO     | chi2: 0.30436600824152715
[2026-04-22 14:02:52] 2026-04-22 11:57:41,090 | INFO     | current chi2=0.30436600824152715 (change=77.77917332856839 %)
[2026-04-22 14:02:52] 2026-04-22 11:57:41,091 | INFO     | sum of square deviations: 1661798600.0
[2026-04-22 14:02:52] 2026-04-22 11:57:41,092 | INFO     | sum of deviations: -32313417881.999996
[2026-04-22 14:02:52] 2026-04-22 11:57:41,092 | INFO     | mean x (centered): 0.0
[2026-04-22 14:02:52] 2026-04-22 11:57:41,092 | INFO     | mean y: 2441339.205714286
[2026-04-22 14:02:52] 2026-04-22 11:57:41,092 | INFO     | intersect: 2441339.205714286
[2026-04-22 14:02:52] 2026-04-22 11:57:41,092 | INFO     | chi2: 0.27779807370890797
[2026-04-22 14:02:52] 2026-04-22 11:57:41,092 | INFO     | current chi2=0.27779807370890797 (change=8.728942724621344 %)
[2026-04-22 14:02:52] 2026-04-22 11:57:41,092 | INFO     | left removable region: 10
[2026-04-22 14:02:52] 2026-04-22 11:57:41,093 | INFO     | sum of square deviations: 1496660620.0
[2026-04-22 14:02:52] 2026-04-22 11:57:41,093 | INFO     | sum of deviations: -31023572760.000004
[2026-04-22 14:02:52] 2026-04-22 11:57:41,094 | INFO     | mean x (centered): 0.0
[2026-04-22 14:02:52] 2026-04-22 11:57:41,094 | INFO     | mean y: 2442769.769230769
[2026-04-22 14:02:52] 2026-04-22 11:57:41,094 | INFO     | intersect: 2442769.769230769
[2026-04-22 14:02:52] 2026-04-22 11:57:41,094 | INFO     | chi2: 0.27327840197008013
[2026-04-22 14:02:52] 2026-04-22 11:57:41,094 | INFO     | current memory leak: -20.73 B/s (using 169 data points, chi2=0.27)
[2026-04-22 14:02:52] 2026-04-22 11:57:41,095 | INFO     | could have reported an average CPU frequency of 3103 MHz (10 samples)
[2026-04-22 14:02:52] 2026-04-22 11:57:41,095 | INFO     | ..............................
[2026-04-22 14:02:52] 2026-04-22 11:57:41,095 | INFO     | . Timing measurements:
[2026-04-22 14:02:52] 2026-04-22 11:57:41,095 | INFO     | . get job = 0 s
[2026-04-22 14:02:52] 2026-04-22 11:57:41,095 | INFO     | . initial setup = 3 s
[2026-04-22 14:02:52] 2026-04-22 11:57:41,095 | INFO     | . payload setup = 6 s
[2026-04-22 14:02:52] 2026-04-22 11:57:41,095 | INFO     | . stage-in = 0 s
[2026-04-22 14:02:52] 2026-04-22 11:57:41,095 | INFO     | . payload execution = 11287 s
[2026-04-22 14:02:52] 2026-04-22 11:57:41,095 | INFO     | . stage-out = 0 s
[2026-04-22 14:02:52] 2026-04-22 11:57:41,095 | INFO     | . log creation = 0 s
[2026-04-22 14:02:52] 2026-04-22 11:57:41,095 | INFO     | ..............................
[2026-04-22 14:02:52] 2026-04-22 11:57:41,166 | INFO     | 
[2026-04-22 14:02:52] 2026-04-22 11:57:41,166 | INFO     | job summary report
[2026-04-22 14:02:52] 2026-04-22 11:57:41,166 | INFO     | --------------------------------------------------
[2026-04-22 14:02:52] 2026-04-22 11:57:41,166 | INFO     | PanDA job id: 7105104737
[2026-04-22 14:02:52] 2026-04-22 11:57:41,166 | INFO     | task id: 49820375
[2026-04-22 14:02:52] 2026-04-22 11:57:41,166 | INFO     | errors: (none)
[2026-04-22 14:02:52] 2026-04-22 11:57:41,167 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-22 14:02:52] 2026-04-22 11:57:41,167 | INFO     | pilot state: finished 
[2026-04-22 14:02:52] 2026-04-22 11:57:41,167 | INFO     | transexitcode: 0
[2026-04-22 14:02:52] 2026-04-22 11:57:41,167 | INFO     | exeerrorcode: 0
[2026-04-22 14:02:52] 2026-04-22 11:57:41,167 | INFO     | exeerrordiag: 
[2026-04-22 14:02:52] 2026-04-22 11:57:41,167 | INFO     | exitcode: 0
[2026-04-22 14:02:52] 2026-04-22 11:57:41,167 | INFO     | exitmsg: OK
[2026-04-22 14:02:52] 2026-04-22 11:57:41,167 | INFO     | cpuconsumptiontime: 44114 s
[2026-04-22 14:02:52] 2026-04-22 11:57:41,167 | INFO     | nevents: 400
[2026-04-22 14:02:52] 2026-04-22 11:57:41,167 | INFO     | neventsw: 0
[2026-04-22 14:02:52] 2026-04-22 11:57:41,167 | INFO     | pid: 3945242
[2026-04-22 14:02:52] 2026-04-22 11:57:41,167 | INFO     | pgrp: 3945242
[2026-04-22 14:02:52] 2026-04-22 11:57:41,167 | INFO     | corecount: 4
[2026-04-22 14:02:52] 2026-04-22 11:57:41,167 | INFO     | event service: False
[2026-04-22 14:02:52] 2026-04-22 11:57:41,167 | INFO     | sizes: {0: 2274624, 1: 2276453, 11: 2276453, 11297: 2305898, 11298: 2305897, 11299: 2315295}
[2026-04-22 14:02:52] 2026-04-22 11:57:41,167 | INFO     | --------------------------------------------------
[2026-04-22 14:02:52] 2026-04-22 11:57:41,167 | INFO     | 
[2026-04-22 14:02:52] 2026-04-22 11:57:41,167 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot32/slots/0
[2026-04-22 14:02:52] 2026-04-22 11:57:41,182 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-22 14:02:52] 2026-04-22 11:57:41,183 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-22 14:02:52] 2026-04-22 11:57:41,183 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-22 14:02:52] 2026-04-22 11:57:41,183 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-22 14:02:52] 2026-04-22 11:57:41,183 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-22 14:02:52] 2026-04-22 11:57:41,183 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-22 14:02:52] 2026-04-22 11:57:41,183 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-22 14:02:52] 2026-04-22 11:57:41,183 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-22 14:02:52] 2026-04-22 11:57:41,183 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-22 14:02:52] 2026-04-22 11:57:41,183 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-22 14:02:52] 2026-04-22 11:57:41,183 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-22 14:02:52] 2026-04-22 11:57:41,183 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-22 14:02:52] 2026-04-22 11:57:41,183 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-22 14:02:52] 2026-04-22 11:57:41,183 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-22 14:02:52] 2026-04-22 11:57:41,183 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-22 14:02:52] 2026-04-22 11:57:41,183 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-22 14:02:52] 2026-04-22 11:57:41,183 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-22 14:02:52] 2026-04-22 11:57:41,183 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-22 14:02:52] 2026-04-22 11:57:41,184 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-22 14:02:52] 2026-04-22 11:57:41,184 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-22 14:02:52] 2026-04-22 11:57:41,184 | INFO     | job 7105104737 has completed (purged errors)
[2026-04-22 14:02:52] 2026-04-22 11:57:41,184 | INFO     | overall cleanup function is called
[2026-04-22 14:02:52] 2026-04-22 11:57:41,423 | WARNING  | process 3945242 can no longer be monitored (due to stat problems) - aborting
[2026-04-22 14:02:52] 2026-04-22 11:57:41,561 | INFO     | using path: /var/lib/boinc/var/slot32/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-22 14:02:52] 2026-04-22 11:57:41,731 | INFO     | number of running child processes to parent process 3945242: 1
[2026-04-22 14:02:52] 2026-04-22 11:57:41,731 | INFO     | maximum number of monitored processes: 6
[2026-04-22 14:02:52] 2026-04-22 11:57:41,731 | INFO     | aborting job monitoring since job object (job id=7105104737) has expired
[2026-04-22 14:02:52] 2026-04-22 11:57:42,192 | INFO     | --- collectZombieJob: --- 10, [3945242]
[2026-04-22 14:02:52] 2026-04-22 11:57:42,192 | INFO     | zombie collector waiting for pid 3945242
[2026-04-22 14:02:52] 2026-04-22 11:57:42,192 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-22 14:02:52] 2026-04-22 11:57:42,192 | INFO     | collected zombie processes
[2026-04-22 14:02:52] 2026-04-22 11:57:42,192 | INFO     | will attempt to kill all subprocesses of pid=3945242
[2026-04-22 14:02:52] 2026-04-22 11:57:42,367 | INFO     | process IDs to be killed: [3945242] (in reverse order)
[2026-04-22 14:02:52] 2026-04-22 11:57:42,433 | WARNING  | found no corresponding commands to process id(s)
[2026-04-22 14:02:52] 2026-04-22 11:57:42,433 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-22 14:02:52] 2026-04-22 11:57:42,440 | INFO     | did not find any defunct processes belonging to 3945242
[2026-04-22 14:02:52] 2026-04-22 11:57:42,446 | INFO     | did not find any defunct processes belonging to 3945242
[2026-04-22 14:02:52] 2026-04-22 11:57:42,446 | INFO     | Ready for new job
[2026-04-22 14:02:52] 2026-04-22 11:57:42,448 | INFO     | **************************************
[2026-04-22 14:02:52] 2026-04-22 11:57:42,448 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-22 14:02:52] 2026-04-22 11:57:42,448 | INFO     | **************************************
[2026-04-22 14:02:52] 2026-04-22 11:57:42,448 | INFO     | 
[2026-04-22 14:02:52] 2026-04-22 11:57:42,450 | INFO     | architecture information:
[2026-04-22 14:02:52] 2026-04-22 11:57:42,451 | INFO     | executing command: cat /etc/os-release
[2026-04-22 14:02:52] 2026-04-22 11:57:42,461 | INFO     | cat /etc/os-release:
[2026-04-22 14:02:52] NAME="CentOS Linux"
[2026-04-22 14:02:52] VERSION="7 (Core)"
[2026-04-22 14:02:52] ID="centos"
[2026-04-22 14:02:52] ID_LIKE="rhel fedora"
[2026-04-22 14:02:52] VERSION_ID="7"
[2026-04-22 14:02:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-22 14:02:52] ANSI_COLOR="0;31"
[2026-04-22 14:02:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-22 14:02:52] HOME_URL="https://www.centos.org/"
[2026-04-22 14:02:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-22 14:02:52] 
[2026-04-22 14:02:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-22 14:02:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-22 14:02:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-22 14:02:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-22 14:02:52] 
[2026-04-22 14:02:52] 2026-04-22 11:57:42,461 | INFO     | **************************************
[2026-04-22 14:02:52] 2026-04-22 11:57:42,964 | INFO     | executing command: df -mP /var/lib/boinc/var/slot32/slots/0
[2026-04-22 14:02:52] 2026-04-22 11:57:42,975 | INFO     | sufficient remaining disk space (56911462400 B)
[2026-04-22 14:02:52] 2026-04-22 11:57:42,975 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-22 14:02:52] 2026-04-22 11:57:42,975 | INFO     | current server update state: UPDATING_FINAL
[2026-04-22 14:02:52] 2026-04-22 11:57:42,975 | INFO     | update_server=False
[2026-04-22 14:02:52] 2026-04-22 11:57:42,975 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-22 14:02:52] 2026-04-22 11:57:42,976 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-22 14:02:52] 2026-04-22 11:57:42,976 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-22 14:02:52] 2026-04-22 11:57:42,976 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-22 14:02:52] 2026-04-22 11:57:42,976 | INFO     | aborting loop
[2026-04-22 14:02:52] 2026-04-22 11:57:43,002 | INFO     | all payload control threads have been joined
[2026-04-22 14:02:52] 2026-04-22 11:57:43,315 | INFO     | all data control threads have been joined
[2026-04-22 14:02:52] 2026-04-22 11:57:43,807 | INFO     | all job control threads have been joined
[2026-04-22 14:02:52] 2026-04-22 11:57:43,978 | INFO     | [job] job monitor thread has finished
[2026-04-22 14:02:52] 2026-04-22 11:57:43,981 | INFO     | [job] retrieve thread has finished
[2026-04-22 14:02:52] 2026-04-22 11:57:43,981 | INFO     | [job] queue monitor thread has finished
[2026-04-22 14:02:52] 2026-04-22 11:57:44,008 | INFO     | [payload] control thread has finished
[2026-04-22 14:02:52] 2026-04-22 11:57:44,026 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-22 14:02:52] 2026-04-22 11:57:44,321 | INFO     | [data] control thread has finished
[2026-04-22 14:02:52] 2026-04-22 11:57:44,645 | INFO     | [job] create_data_payload thread has finished
[2026-04-22 14:02:52] 2026-04-22 11:57:44,773 | INFO     | [payload] validate_pre thread has finished
[2026-04-22 14:02:52] 2026-04-22 11:57:44,813 | INFO     | [job] control thread has finished
[2026-04-22 14:02:52] 2026-04-22 11:57:44,968 | INFO     | [data] copytool_in thread has finished
[2026-04-22 14:02:52] 2026-04-22 11:57:45,043 | INFO     | [payload] execute_payloads thread has finished
[2026-04-22 14:02:52] 2026-04-22 11:57:45,206 | INFO     | [payload] failed_post thread has finished
[2026-04-22 14:02:52] 2026-04-22 11:57:45,380 | INFO     | [job] validate thread has finished
[2026-04-22 14:02:52] 2026-04-22 11:57:45,430 | INFO     | [payload] validate_post thread has finished
[2026-04-22 14:02:52] 2026-04-22 11:57:45,731 | INFO     | job.realtimelogging is not enabled
[2026-04-22 14:02:52] 2026-04-22 11:57:46,032 | INFO     | [data] copytool_out thread has finished
[2026-04-22 14:02:52] 2026-04-22 11:57:46,736 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-22 14:02:52] 2026-04-22 11:57:46,982 | INFO     | [data] queue_monitor thread has finished
[2026-04-22 14:02:52] 2026-04-22 11:58:14,029 | INFO     | PID=3939957 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-22 14:02:52] 2026-04-22 11:58:14,030 | INFO     | .. there are 2 such processes running
[2026-04-22 14:02:52] 2026-04-22 11:58:14,031 | INFO     | found 0 job(s) in 20 queues
[2026-04-22 14:02:52] 2026-04-22 11:58:14,031 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-22 14:02:52] 2026-04-22 11:58:14,031 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-22 14:02:52] 2026-04-22 11:58:26,443 | INFO     | [monitor] cgroup control has ended
[2026-04-22 14:02:52] 2026-04-22 11:58:27,352 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23379172628288)>', '<ExcThread(monitor, started 23378934380288)>']
[2026-04-22 14:02:52] 2026-04-22 11:58:28,102 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-22 14:02:52] 2026-04-22 11:58:28,103 | INFO     | [monitor] control thread has ended
[2026-04-22 14:02:52] 2026-04-22 11:58:32,370 | INFO     | all workflow threads have been joined
[2026-04-22 14:02:52] 2026-04-22 11:58:32,370 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-22 14:02:52] 2026-04-22 11:58:32,370 | INFO     | traces error code: 0
[2026-04-22 14:02:52] 2026-04-22 11:58:32,370 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-22 14:02:52] 2026-04-22 11:58:32,488 [wrapper] ==== pilot stdout END ====
[2026-04-22 14:02:52] 2026-04-22 11:58:32,491 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-22 14:02:52] 2026-04-22 11:58:32,493 [wrapper] pilotpid: 3939957
[2026-04-22 14:02:52] 2026-04-22 11:58:32,494 [wrapper] Pilot exit status: 0
[2026-04-22 14:02:52] 2026-04-22 11:58:32,502 [wrapper] pandaids: 7105104737
[2026-04-22 14:02:52] 2026-04-22 11:58:32,549 [wrapper] cleanup supervisor_pilot 4060675 3939958
[2026-04-22 14:02:52] 2026-04-22 11:58:32,551 [wrapper] Test setup, not cleaning
[2026-04-22 14:02:52] 2026-04-22 11:58:32,553 [wrapper] apfmon messages muted
[2026-04-22 14:02:52] 2026-04-22 11:58:32,555 [wrapper] ==== wrapper stdout END ====
[2026-04-22 14:02:52] 2026-04-22 11:58:32,557 [wrapper] ==== wrapper stderr END ====
[2026-04-22 14:02:52]  *** Error codes and diagnostics ***
[2026-04-22 14:02:52]     "exeErrorCode": 0,
[2026-04-22 14:02:52]     "pilotErrorCode": 0,
[2026-04-22 14:02:52]  *** Listing of results directory ***
[2026-04-22 14:02:52] total 2456400
[2026-04-22 14:02:52] -rwx------. 1 boinc boinc      36322 Apr 21 09:49 runpilot2-wrapper.sh
[2026-04-22 14:02:52] -rw-r--r--. 1 boinc boinc     644190 Apr 21 11:10 pilot3.tar.gz
[2026-04-22 14:02:52] -rw-r--r--. 1 boinc boinc       5094 Apr 21 11:22 queuedata.json
[2026-04-22 14:02:52] -rw-r--r--. 1 boinc boinc        100 Apr 22 10:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-22 14:02:52] -rwxr-xr-x. 1 boinc boinc       7986 Apr 22 10:48 run_atlas
[2026-04-22 14:02:52] -rw-r--r--. 1 boinc boinc        105 Apr 22 10:48 job.xml
[2026-04-22 14:02:52] -rw-r--r--. 1 boinc boinc       6480 Apr 22 10:48 init_data.xml
[2026-04-22 14:02:52] -rw-r--r--. 2 boinc boinc 2232187498 Apr 22 10:48 EVNT.49820373._000020.pool.root.1
[2026-04-22 14:02:52] -rw-r--r--. 2 boinc boinc      15665 Apr 22 10:48 start_atlas.sh
[2026-04-22 14:02:52] drwxrwx--x. 2 boinc boinc       4096 Apr 22 10:48 shared
[2026-04-22 14:02:52] -rw-r--r--. 2 boinc boinc     656936 Apr 22 10:48 input.tar.gz
[2026-04-22 14:02:52] -rw-r--r--. 1 boinc boinc          0 Apr 22 10:48 boinc_lockfile
[2026-04-22 14:02:52] -rw-r--r--. 1 boinc boinc       2586 Apr 22 10:49 pandaJob.out
[2026-04-22 14:02:52] -rw-------. 1 boinc boinc     997132 Apr 22 10:49 agis_schedconf.cvmfs.json
[2026-04-22 14:02:52] -rw-------. 1 boinc boinc        452 Apr 22 10:49 workernode_map.json
[2026-04-22 14:02:52] drwx------. 5 boinc boinc       4096 Apr 22 10:49 pilot3
[2026-04-22 14:02:52] -rw-------. 1 boinc boinc  276012168 Apr 22 13:57 HITS.49820375._009997.pool.root.1
[2026-04-22 14:02:52] -rw-r--r--. 1 boinc boinc        487 Apr 22 13:57 boinc_task_state.xml
[2026-04-22 14:02:52] -rw-------. 1 boinc boinc       1047 Apr 22 13:57 memory_monitor_summary.json
[2026-04-22 14:02:52] -rw-------. 1 boinc boinc    1509089 Apr 22 13:57 agis_ddmendpoints.agis.ALL.json
[2026-04-22 14:02:52] -rw-------. 1 boinc boinc     474805 Apr 22 13:57 log.49820375._009997.job.log.tgz.1
[2026-04-22 14:02:52] -rw-------. 1 boinc boinc       6428 Apr 22 13:57 heartbeat_new.json
[2026-04-22 14:02:52] -rw-------. 1 boinc boinc       6319 Apr 22 13:57 heartbeat.json
[2026-04-22 14:02:52] -rw-------. 1 boinc boinc         95 Apr 22 13:58 pilot_heartbeat.json
[2026-04-22 14:02:52] -rw-------. 1 boinc boinc       4899 Apr 22 13:58 pilotlog.txt
[2026-04-22 14:02:52] -rw-------. 1 boinc boinc    1077052 Apr 22 13:58 log.49820375._009997.job.log.1
[2026-04-22 14:02:52] -rw-------. 1 boinc boinc        357 Apr 22 13:58 output.list
[2026-04-22 14:02:52] -rw-r--r--. 1 boinc boinc        410 Apr 22 13:58 runtime_log
[2026-04-22 14:02:52] -rw-------. 1 boinc boinc    1566720 Apr 22 13:58 result.tar.gz
[2026-04-22 14:02:52] -rw-r--r--. 1 boinc boinc       8827 Apr 22 13:58 runtime_log.err
[2026-04-22 14:02:52] -rw-------. 1 boinc boinc        664 Apr 22 13:58 2c1259ce2fc3.diag
[2026-04-22 14:02:52] -rw-r--r--. 1 boinc boinc         26 Apr 22 14:02 wrapper_checkpoint.txt
[2026-04-22 14:02:52] -rw-r--r--. 1 boinc boinc       8192 Apr 22 14:02 boinc_mmap_file
[2026-04-22 14:02:52] -rw-r--r--. 1 boinc boinc      21050 Apr 22 14:02 stderr.txt
[2026-04-22 14:02:52] HITS file was successfully produced:
[2026-04-22 14:02:52] -rw-------. 1 boinc boinc 276012168 Apr 22 13:57 shared/HITS.pool.root.1
[2026-04-22 14:02:52]  *** Contents of shared directory: ***
[2026-04-22 14:02:52] total 2451616
[2026-04-22 14:02:52] -rw-r--r--. 2 boinc boinc 2232187498 Apr 22 10:48 ATLAS.root_0
[2026-04-22 14:02:52] -rw-r--r--. 2 boinc boinc      15665 Apr 22 10:48 start_atlas.sh
[2026-04-22 14:02:52] -rw-r--r--. 2 boinc boinc     656936 Apr 22 10:48 input.tar.gz
[2026-04-22 14:02:52] -rw-------. 1 boinc boinc  276012168 Apr 22 13:57 HITS.pool.root.1
[2026-04-22 14:02:52] -rw-------. 1 boinc boinc    1566720 Apr 22 13:58 result.tar.gz
14:02:54 (3935584): run_atlas exited; CPU time 44395.209589
14:02:54 (3935584): called boinc_finish(0)

</stderr_txt>
]]>

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