Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:15:30 (34628): wrapper (7.7.26015): starting
06:15:30 (34628): wrapper: running run_atlas (--nthreads 8)
[2026-04-21 06:15:30] Arguments: --nthreads 8
[2026-04-21 06:15:30] Threads: 8
[2026-04-21 06:15:30] Checking for CVMFS
[2026-04-21 06:15:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-21 06:15:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-21 06:15:30] Running cvmfs_config stat atlas.cern.ch
[2026-04-21 06:15:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-21 06:15:30] 2.11.2.0 27562 544175 319564 158686 0 17 12411727 18432001 1002 130560 7 833286687 99.438 1135129829 25831 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2026-04-21 06:15:30] CVMFS is ok
[2026-04-21 06:15:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 06:15:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 06:15:30] Further information can be found at the LHC@home message board.
[2026-04-21 06:15:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 06:15:30] Checking for apptainer binary...
[2026-04-21 06:15:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-21 06:15:30] Running /usr/bin/apptainer --version
[2026-04-21 06:15:30] apptainer version 1.3.2-1.el7
[2026-04-21 06:15:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 06:15:31] c-9-30.aglt2.org
[2026-04-21 06:15:31] apptainer works
[2026-04-21 06:15:31] Set ATHENA_PROC_NUMBER=8
[2026-04-21 06:15:31] Set ATHENA_CORE_NUMBER=8
[2026-04-21 06:15:31] Starting ATLAS job with PandaID=7105138578
[2026-04-21 06:15:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
08:30:43 (20950): wrapper (7.7.26015): starting
08:30:43 (20950): wrapper: running run_atlas (--nthreads 8)
[2026-04-21 08:30:43] Arguments: --nthreads 8
[2026-04-21 08:30:43] Threads: 8
[2026-04-21 08:30:43] This job has been restarted, cleaning up previous attempt
[2026-04-21 08:30:43] Checking for CVMFS
[2026-04-21 08:30:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-21 08:30:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-21 08:30:43] Running cvmfs_config stat atlas.cern.ch
[2026-04-21 08:30:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-21 08:30:44] 2.11.2.0 27562 544310 317384 158690 1 11 12444804 18432001 1 130560 7 833467963 99.439 1135135048 25831 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2026-04-21 08:30:44] CVMFS is ok
[2026-04-21 08:30:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 08:30:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 08:30:44] Further information can be found at the LHC@home message board.
[2026-04-21 08:30:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 08:30:44] Checking for apptainer binary...
[2026-04-21 08:30:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-21 08:30:44] Running /usr/bin/apptainer --version
[2026-04-21 08:30:44] apptainer version 1.3.2-1.el7
[2026-04-21 08:30:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 08:30:45] c-9-30.aglt2.org
[2026-04-21 08:30:45] apptainer works
[2026-04-21 08:30:45] Set ATHENA_PROC_NUMBER=8
[2026-04-21 08:30:45] Set ATHENA_CORE_NUMBER=8
[2026-04-21 08:30:45] Starting ATLAS job with PandaID=7105138578
[2026-04-21 08:30:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-21 13:31:40]  *** The last 200 lines of the pilot log: ***
[2026-04-21 13:31:40] 2026-04-21 17:31:08,167 | INFO     | number of running child processes to parent process 46678: 1
[2026-04-21 13:31:40] 2026-04-21 17:31:08,167 | INFO     | maximum number of monitored processes: 6
[2026-04-21 13:31:40] 2026-04-21 17:31:08,406 | INFO     | job 7105138578 has state=finished
[2026-04-21 13:31:40] 2026-04-21 17:31:08,406 | INFO     | preparing for final server update for job 7105138578 in state='finished'
[2026-04-21 13:31:40] 2026-04-21 17:31:08,504 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-04-21 13:31:40] 2026-04-21 17:31:08,505 | INFO     | reading metadata from: /tmp/boinchome/slots/2/PanDA_Pilot-7105138578/jobReport.json
[2026-04-21 13:31:40] 2026-04-21 17:31:08,508 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/2/workernode_map.json
[2026-04-21 13:31:40] 2026-04-21 17:31:08,509 | INFO     | this job has now completed (state=finished)
[2026-04-21 13:31:40] 2026-04-21 17:31:08,509 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-21 13:31:40] 2026-04-21 17:31:08,509 | INFO     | log transfer has been attempted: DONE
[2026-04-21 13:31:40] 2026-04-21 17:31:08,509 | INFO     | job 7105138578 has finished - writing final server update
[2026-04-21 13:31:40] 2026-04-21 17:31:08,510 | INFO     | total number of processed events: 400 (read)
[2026-04-21 13:31:40] 2026-04-21 17:31:08,514 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7105138578/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 13:31:40] 2026-04-21 17:31:08,515 | INFO     | extracted standard info from prmon json
[2026-04-21 13:31:40] 2026-04-21 17:31:08,515 | INFO     | extracted standard memory fields from prmon json
[2026-04-21 13:31:40] 2026-04-21 17:31:08,515 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-21 13:31:40] 2026-04-21 17:31:08,516 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-21 13:31:40] 2026-04-21 17:31:08,520 | INFO     | fitting pss+swap vs Time
[2026-04-21 13:31:40] 2026-04-21 17:31:08,521 | INFO     | sum of square deviations: 7960484140.0
[2026-04-21 13:31:40] 2026-04-21 17:31:08,523 | INFO     | sum of deviations: 44341111914.0
[2026-04-21 13:31:40] 2026-04-21 17:31:08,524 | INFO     | mean x (centered): 0.0
[2026-04-21 13:31:40] 2026-04-21 17:31:08,524 | INFO     | mean y: 2533560.254237288
[2026-04-21 13:31:40] 2026-04-21 17:31:08,524 | INFO     | intersect: 2533560.254237288
[2026-04-21 13:31:40] 2026-04-21 17:31:08,524 | INFO     | chi2: 1.2141496475999949
[2026-04-21 13:31:40] 2026-04-21 17:31:08,525 | INFO     | sum of square deviations: 7562532492.5
[2026-04-21 13:31:40] 2026-04-21 17:31:08,527 | INFO     | sum of deviations: 43261069246.5
[2026-04-21 13:31:40] 2026-04-21 17:31:08,527 | INFO     | mean x (centered): 0.0
[2026-04-21 13:31:40] 2026-04-21 17:31:08,527 | INFO     | mean y: 2533146.54137931
[2026-04-21 13:31:40] 2026-04-21 17:31:08,528 | INFO     | intersect: 2533146.54137931
[2026-04-21 13:31:40] 2026-04-21 17:31:08,528 | INFO     | chi2: 1.2144399456084078
[2026-04-21 13:31:40] 2026-04-21 17:31:08,528 | INFO     | current chi2=1.2144399456084078 (change=-0.02390957399582417 %)
[2026-04-21 13:31:40] 2026-04-21 17:31:08,528 | INFO     | right removable region: 289
[2026-04-21 13:31:40] 2026-04-21 17:31:08,529 | INFO     | sum of square deviations: 7562532492.5
[2026-04-21 13:31:40] 2026-04-21 17:31:08,531 | INFO     | sum of deviations: 2840951627.4999995
[2026-04-21 13:31:40] 2026-04-21 17:31:08,531 | INFO     | mean x (centered): 0.0
[2026-04-21 13:31:40] 2026-04-21 17:31:08,531 | INFO     | mean y: 2549352.3
[2026-04-21 13:31:40] 2026-04-21 17:31:08,531 | INFO     | intersect: 2549352.3
[2026-04-21 13:31:40] 2026-04-21 17:31:08,532 | INFO     | chi2: 0.010774159921118716
[2026-04-21 13:31:40] 2026-04-21 17:31:08,532 | INFO     | current chi2=0.010774159921118716 (change=99.11261680613951 %)
[2026-04-21 13:31:40] 2026-04-21 17:31:08,532 | INFO     | sum of square deviations: 7178069470.0
[2026-04-21 13:31:40] 2026-04-21 17:31:08,535 | INFO     | sum of deviations: 1032755742.0000001
[2026-04-21 13:31:40] 2026-04-21 17:31:08,535 | INFO     | mean x (centered): 0.0
[2026-04-21 13:31:40] 2026-04-21 17:31:08,535 | INFO     | mean y: 2550067.8596491227
[2026-04-21 13:31:40] 2026-04-21 17:31:08,535 | INFO     | intersect: 2550067.8596491227
[2026-04-21 13:31:40] 2026-04-21 17:31:08,535 | INFO     | chi2: 0.009500762180020574
[2026-04-21 13:31:40] 2026-04-21 17:31:08,536 | INFO     | current chi2=0.009500762180020574 (change=11.818997958273492 %)
[2026-04-21 13:31:40] 2026-04-21 17:31:08,536 | INFO     | left removable region: 10
[2026-04-21 13:31:40] 2026-04-21 17:31:08,536 | INFO     | sum of square deviations: 6734191380.0
[2026-04-21 13:31:40] 2026-04-21 17:31:08,538 | INFO     | sum of deviations: 651959338.0000015
[2026-04-21 13:31:40] 2026-04-21 17:31:08,539 | INFO     | mean x (centered): 0.0
[2026-04-21 13:31:40] 2026-04-21 17:31:08,539 | INFO     | mean y: 2549911.146953405
[2026-04-21 13:31:40] 2026-04-21 17:31:08,539 | INFO     | intersect: 2549911.146953405
[2026-04-21 13:31:40] 2026-04-21 17:31:08,539 | INFO     | chi2: 0.009460933887292194
[2026-04-21 13:31:40] 2026-04-21 17:31:08,539 | INFO     | current memory leak: 0.10 B/s (using 279 data points, chi2=0.01)
[2026-04-21 13:31:40] 2026-04-21 17:31:08,540 | INFO     | could have reported an average CPU frequency of 3017 MHz (13 samples)
[2026-04-21 13:31:40] 2026-04-21 17:31:08,540 | INFO     | ..............................
[2026-04-21 13:31:40] 2026-04-21 17:31:08,540 | INFO     | . Timing measurements:
[2026-04-21 13:31:40] 2026-04-21 17:31:08,540 | INFO     | . get job = 0 s
[2026-04-21 13:31:40] 2026-04-21 17:31:08,540 | INFO     | . initial setup = 1 s
[2026-04-21 13:31:40] 2026-04-21 17:31:08,540 | INFO     | . payload setup = 7 s
[2026-04-21 13:31:40] 2026-04-21 17:31:08,541 | INFO     | . stage-in = 0 s
[2026-04-21 13:31:40] 2026-04-21 17:31:08,541 | INFO     | . payload execution = 17986 s
[2026-04-21 13:31:40] 2026-04-21 17:31:08,541 | INFO     | . stage-out = 1 s
[2026-04-21 13:31:40] 2026-04-21 17:31:08,541 | INFO     | . log creation = 0 s
[2026-04-21 13:31:40] 2026-04-21 17:31:08,541 | INFO     | ..............................
[2026-04-21 13:31:40] 2026-04-21 17:31:08,645 | INFO     | 
[2026-04-21 13:31:40] 2026-04-21 17:31:08,646 | INFO     | job summary report
[2026-04-21 13:31:40] 2026-04-21 17:31:08,646 | INFO     | --------------------------------------------------
[2026-04-21 13:31:40] 2026-04-21 17:31:08,646 | INFO     | PanDA job id: 7105138578
[2026-04-21 13:31:40] 2026-04-21 17:31:08,646 | INFO     | task id: 49820244
[2026-04-21 13:31:40] 2026-04-21 17:31:08,646 | INFO     | errors: (none)
[2026-04-21 13:31:40] 2026-04-21 17:31:08,647 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-21 13:31:40] 2026-04-21 17:31:08,647 | INFO     | pilot state: finished 
[2026-04-21 13:31:40] 2026-04-21 17:31:08,647 | INFO     | transexitcode: 0
[2026-04-21 13:31:40] 2026-04-21 17:31:08,647 | INFO     | exeerrorcode: 0
[2026-04-21 13:31:40] 2026-04-21 17:31:08,648 | INFO     | exeerrordiag: 
[2026-04-21 13:31:40] 2026-04-21 17:31:08,648 | INFO     | exitcode: 0
[2026-04-21 13:31:40] 2026-04-21 17:31:08,648 | INFO     | exitmsg: OK
[2026-04-21 13:31:40] 2026-04-21 17:31:08,648 | INFO     | cpuconsumptiontime: 138135 s
[2026-04-21 13:31:40] 2026-04-21 17:31:08,648 | INFO     | nevents: 400
[2026-04-21 13:31:40] 2026-04-21 17:31:08,649 | INFO     | neventsw: 0
[2026-04-21 13:31:40] 2026-04-21 17:31:08,649 | INFO     | pid: 46678
[2026-04-21 13:31:40] 2026-04-21 17:31:08,649 | INFO     | pgrp: 46678
[2026-04-21 13:31:40] 2026-04-21 17:31:08,649 | INFO     | corecount: 8
[2026-04-21 13:31:40] 2026-04-21 17:31:08,649 | INFO     | event service: False
[2026-04-21 13:31:40] 2026-04-21 17:31:08,650 | INFO     | sizes: {0: 2281783, 1: 2283357, 11: 2283385, 17997: 2315455, 17998: 2315454, 18000: 2317714, 18003: 2317852}
[2026-04-21 13:31:40] 2026-04-21 17:31:08,650 | INFO     | --------------------------------------------------
[2026-04-21 13:31:40] 2026-04-21 17:31:08,650 | INFO     | 
[2026-04-21 13:31:40] 2026-04-21 17:31:08,650 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-04-21 13:31:40] 2026-04-21 17:31:08,675 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-21 13:31:40] 2026-04-21 17:31:08,675 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-21 13:31:40] 2026-04-21 17:31:08,675 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-21 13:31:40] 2026-04-21 17:31:08,675 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-21 13:31:40] 2026-04-21 17:31:08,676 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-21 13:31:40] 2026-04-21 17:31:08,676 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-21 13:31:40] 2026-04-21 17:31:08,676 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-21 13:31:40] 2026-04-21 17:31:08,676 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-21 13:31:40] 2026-04-21 17:31:08,676 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-21 13:31:40] 2026-04-21 17:31:08,677 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-21 13:31:40] 2026-04-21 17:31:08,677 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-21 13:31:40] 2026-04-21 17:31:08,677 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-21 13:31:40] 2026-04-21 17:31:08,677 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-21 13:31:40] 2026-04-21 17:31:08,677 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-21 13:31:40] 2026-04-21 17:31:08,677 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-21 13:31:40] 2026-04-21 17:31:08,677 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-21 13:31:40] 2026-04-21 17:31:08,678 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-21 13:31:40] 2026-04-21 17:31:08,678 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-21 13:31:40] 2026-04-21 17:31:08,678 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-21 13:31:40] 2026-04-21 17:31:08,678 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-21 13:31:40] 2026-04-21 17:31:08,678 | INFO     | job 7105138578 has completed (purged errors)
[2026-04-21 13:31:40] 2026-04-21 17:31:08,679 | INFO     | overall cleanup function is called
[2026-04-21 13:31:40] 2026-04-21 17:31:09,689 | INFO     | --- collectZombieJob: --- 10, [46678]
[2026-04-21 13:31:40] 2026-04-21 17:31:09,689 | INFO     | zombie collector waiting for pid 46678
[2026-04-21 13:31:40] 2026-04-21 17:31:09,690 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-21 13:31:40] 2026-04-21 17:31:09,690 | INFO     | collected zombie processes
[2026-04-21 13:31:40] 2026-04-21 17:31:09,690 | INFO     | will attempt to kill all subprocesses of pid=46678
[2026-04-21 13:31:40] 2026-04-21 17:31:09,883 | INFO     | process IDs to be killed: [46678] (in reverse order)
[2026-04-21 13:31:40] 2026-04-21 17:31:09,941 | WARNING  | found no corresponding commands to process id(s)
[2026-04-21 13:31:40] 2026-04-21 17:31:09,941 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-21 13:31:40] 2026-04-21 17:31:09,948 | INFO     | did not find any defunct processes belonging to 46678
[2026-04-21 13:31:40] 2026-04-21 17:31:09,951 | INFO     | did not find any defunct processes belonging to 46678
[2026-04-21 13:31:40] 2026-04-21 17:31:09,951 | INFO     | Ready for new job
[2026-04-21 13:31:40] 2026-04-21 17:31:09,952 | INFO     | **************************************
[2026-04-21 13:31:40] 2026-04-21 17:31:09,953 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-21 13:31:40] 2026-04-21 17:31:09,953 | INFO     | **************************************
[2026-04-21 13:31:40] 2026-04-21 17:31:09,953 | INFO     | 
[2026-04-21 13:31:40] 2026-04-21 17:31:09,954 | INFO     | architecture information:
[2026-04-21 13:31:40] 2026-04-21 17:31:09,954 | INFO     | executing command: cat /etc/os-release
[2026-04-21 13:31:40] 2026-04-21 17:31:09,963 | INFO     | cat /etc/os-release:
[2026-04-21 13:31:40] NAME="CentOS Linux"
[2026-04-21 13:31:40] VERSION="7 (Core)"
[2026-04-21 13:31:40] ID="centos"
[2026-04-21 13:31:40] ID_LIKE="rhel fedora"
[2026-04-21 13:31:40] VERSION_ID="7"
[2026-04-21 13:31:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-21 13:31:40] ANSI_COLOR="0;31"
[2026-04-21 13:31:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-21 13:31:40] HOME_URL="https://www.centos.org/"
[2026-04-21 13:31:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-21 13:31:40] 
[2026-04-21 13:31:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-21 13:31:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-21 13:31:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-21 13:31:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-21 13:31:40] 
[2026-04-21 13:31:40] 2026-04-21 17:31:09,963 | INFO     | **************************************
[2026-04-21 13:31:40] 2026-04-21 17:31:10,466 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-04-21 13:31:40] 2026-04-21 17:31:10,480 | INFO     | sufficient remaining disk space (92619669504 B)
[2026-04-21 13:31:40] 2026-04-21 17:31:10,480 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-21 13:31:40] 2026-04-21 17:31:10,480 | INFO     | current server update state: UPDATING_FINAL
[2026-04-21 13:31:40] 2026-04-21 17:31:10,481 | INFO     | update_server=False
[2026-04-21 13:31:40] 2026-04-21 17:31:10,481 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-21 13:31:40] 2026-04-21 17:31:10,481 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-21 13:31:40] 2026-04-21 17:31:10,670 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-21 13:31:40] 2026-04-21 17:31:10,671 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-21 13:31:40] 2026-04-21 17:31:10,671 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-21 13:31:40] 2026-04-21 17:31:10,671 | INFO     | will abort loop
[2026-04-21 13:31:40] 2026-04-21 17:31:11,067 | INFO     | all payload control threads have been joined
[2026-04-21 13:31:40] 2026-04-21 17:31:11,106 | INFO     | all job control threads have been joined
[2026-04-21 13:31:40] 2026-04-21 17:31:11,148 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-21 13:31:40] 2026-04-21 17:31:11,486 | INFO     | [job] retrieve thread has finished
[2026-04-21 13:31:40] 2026-04-21 17:31:11,487 | INFO     | [job] queue monitor thread has finished
[2026-04-21 13:31:40] 2026-04-21 17:31:11,507 | INFO     | all data control threads have been joined
[2026-04-21 13:31:40] 2026-04-21 17:31:11,628 | INFO     | [payload] failed_post thread has finished
[2026-04-21 13:31:40] 2026-04-21 17:31:11,670 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-21 13:31:40] 2026-04-21 17:31:11,676 | INFO     | [job] job monitor thread has finished
[2026-04-21 13:31:40] 2026-04-21 17:31:11,696 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-21 13:31:40] 2026-04-21 17:31:12,072 | INFO     | [payload] control thread has finished
[2026-04-21 13:31:40] 2026-04-21 17:31:12,112 | INFO     | [job] control thread has finished
[2026-04-21 13:31:40] 2026-04-21 17:31:12,220 | INFO     | [job] validate thread has finished
[2026-04-21 13:31:40] 2026-04-21 17:31:12,224 | INFO     | [data] copytool_in thread has finished
[2026-04-21 13:31:40] 2026-04-21 17:31:12,233 | INFO     | [job] create_data_payload thread has finished
[2026-04-21 13:31:40] 2026-04-21 17:31:12,249 | INFO     | [payload] validate_post thread has finished
[2026-04-21 13:31:40] 2026-04-21 17:31:12,279 | INFO     | [payload] validate_pre thread has finished
[2026-04-21 13:31:40] 2026-04-21 17:31:12,513 | INFO     | [data] control thread has finished
[2026-04-21 13:31:40] 2026-04-21 17:31:12,715 | INFO     | [payload] execute_payloads thread has finished
[2026-04-21 13:31:40] 2026-04-21 17:31:13,154 | INFO     | [data] copytool_out thread has finished
[2026-04-21 13:31:40] 2026-04-21 17:31:15,702 | INFO     | [data] queue_monitor thread has finished
[2026-04-21 13:31:40] 2026-04-21 17:31:24,051 | INFO     | [monitor] cgroup control has ended
[2026-04-21 13:31:40] 2026-04-21 17:31:25,538 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140480667449152)>', '<ExcThread(monitor, started 140480109074176)>']
[2026-04-21 13:31:40] 2026-04-21 17:31:30,564 | INFO     | all workflow threads have been joined
[2026-04-21 13:31:40] 2026-04-21 17:31:30,564 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-21 13:31:40] 2026-04-21 17:31:30,565 | INFO     | traces error code: 0
[2026-04-21 13:31:40] 2026-04-21 17:31:30,565 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-21 13:31:40] 2026-04-21 17:31:40,006 | INFO     | PID=35761 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-21 13:31:40] 2026-04-21 17:31:40,007 | INFO     | found 0 job(s) in 20 queues
[2026-04-21 13:31:40] 2026-04-21 17:31:40,007 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-21 13:31:40] 2026-04-21 17:31:40,007 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-21 13:31:40] 2026-04-21 17:31:40,007 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-21 13:31:40] 2026-04-21 17:31:40,007 | INFO     | [monitor] control thread has ended
[2026-04-21 13:31:40] 2026-04-21 17:31:40,084 [wrapper] ==== pilot stdout END ====
[2026-04-21 13:31:40] 2026-04-21 17:31:40,087 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-21 13:31:40] 2026-04-21 17:31:40,091 [wrapper] pilotpid: 35761
[2026-04-21 13:31:40] 2026-04-21 17:31:40,095 [wrapper] Pilot exit status: 0
[2026-04-21 13:31:40] 2026-04-21 17:31:40,106 [wrapper] pandaids: 7105138578 7105138578
[2026-04-21 13:31:40] 2026-04-21 17:31:40,163 [wrapper] cleanup supervisor_pilot 19704 35762
[2026-04-21 13:31:40] 2026-04-21 17:31:40,166 [wrapper] Test setup, not cleaning
[2026-04-21 13:31:40] 2026-04-21 17:31:40,169 [wrapper] apfmon messages muted
[2026-04-21 13:31:40] 2026-04-21 17:31:40,173 [wrapper] ==== wrapper stdout END ====
[2026-04-21 13:31:40] 2026-04-21 17:31:40,175 [wrapper] ==== wrapper stderr END ====
[2026-04-21 13:31:40]  *** Error codes and diagnostics ***
[2026-04-21 13:31:40]     "exeErrorCode": 0,
[2026-04-21 13:31:40]     "pilotErrorCode": 0,
[2026-04-21 13:31:40]  *** Listing of results directory ***
[2026-04-21 13:31:40] total 4647880
[2026-04-21 13:31:40] drwx------ 5 boincer umatlas       4096 Apr  1 08:07 pilot3
[2026-04-21 13:31:40] -rwx------ 1 boincer umatlas      36322 Apr 21 03:48 runpilot2-wrapper.sh
[2026-04-21 13:31:40] -rw-r--r-- 1 boincer umatlas     644190 Apr 21 05:10 pilot3.tar.gz
[2026-04-21 13:31:40] -rw-r--r-- 1 boincer umatlas       5094 Apr 21 05:22 queuedata.json
[2026-04-21 13:31:40] -rw-r--r-- 1 boincer umatlas        100 Apr 21 06:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-21 13:31:40] -rwxr-xr-x 1 boincer umatlas       7986 Apr 21 06:15 run_atlas
[2026-04-21 13:31:40] -rw-r--r-- 1 boincer umatlas        105 Apr 21 06:15 job.xml
[2026-04-21 13:31:40] -rw-r--r-- 3 boincer umatlas 2239200913 Apr 21 06:15 EVNT.49820242._000035.pool.root.1
[2026-04-21 13:31:40] -rw-r--r-- 3 boincer umatlas 2239200913 Apr 21 06:15 ATLAS.root_0
[2026-04-21 13:31:40] -rw-r--r-- 2 boincer umatlas      15665 Apr 21 06:15 start_atlas.sh
[2026-04-21 13:31:40] drwxrwx--x 2 boincer umatlas       4096 Apr 21 06:15 shared
[2026-04-21 13:31:40] -rw-r--r-- 2 boincer umatlas     656922 Apr 21 06:15 input.tar.gz
[2026-04-21 13:31:40] -rw-r--r-- 1 boincer umatlas          0 Apr 21 06:15 boinc_lockfile
[2026-04-21 13:31:40] -rw-r--r-- 1 boincer umatlas       2551 Apr 21 08:30 pandaJob.out
[2026-04-21 13:31:40] -rw------- 1 boincer umatlas         57 Apr 21 08:30 setup.sh.local
[2026-04-21 13:31:40] -rw------- 1 boincer umatlas     993801 Apr 21 08:30 agis_schedconf.cvmfs.json
[2026-04-21 13:31:40] -rw------- 1 boincer umatlas        438 Apr 21 08:30 workernode_map.json
[2026-04-21 13:31:40] -rw-r--r-- 1 boincer umatlas        490 Apr 21 13:30 boinc_task_state.xml
[2026-04-21 13:31:40] -rw------- 1 boincer umatlas  272541097 Apr 21 13:30 HITS.49820244._013307.pool.root.1
[2026-04-21 13:31:40] -rw------- 1 boincer umatlas       1047 Apr 21 13:30 memory_monitor_summary.json
[2026-04-21 13:31:40] -rw------- 1 boincer umatlas    1509089 Apr 21 13:31 agis_ddmendpoints.agis.ALL.json
[2026-04-21 13:31:40] -rw------- 1 boincer umatlas     609649 Apr 21 13:31 log.49820244._013307.job.log.tgz.1
[2026-04-21 13:31:40] -rw------- 1 boincer umatlas       6415 Apr 21 13:31 heartbeat_new.json
[2026-04-21 13:31:40] -rw------- 1 boincer umatlas       6306 Apr 21 13:31 heartbeat.json
[2026-04-21 13:31:40] -rw-r--r-- 1 boincer umatlas       5951 Apr 21 13:31 init_data.xml
[2026-04-21 13:31:40] -rw-r--r-- 1 boincer umatlas       8192 Apr 21 13:31 boinc_mmap_file
[2026-04-21 13:31:40] -rw-r--r-- 1 boincer umatlas         29 Apr 21 13:31 wrapper_checkpoint.txt
[2026-04-21 13:31:40] -rw------- 1 boincer umatlas        745 Apr 21 13:31 pilotlog.txt
[2026-04-21 13:31:40] -rw------- 1 boincer umatlas         96 Apr 21 13:31 pilot_heartbeat.json
[2026-04-21 13:31:40] -rw------- 1 boincer umatlas    1608977 Apr 21 13:31 log.49820244._013307.job.log.1
[2026-04-21 13:31:40] -rw------- 1 boincer umatlas        357 Apr 21 13:31 output.list
[2026-04-21 13:31:40] -rw-r--r-- 1 boincer umatlas        410 Apr 21 13:31 runtime_log
[2026-04-21 13:31:40] -rw------- 1 boincer umatlas    2232320 Apr 21 13:31 result.tar.gz
[2026-04-21 13:31:40] -rw-r--r-- 1 boincer umatlas       9039 Apr 21 13:31 runtime_log.err
[2026-04-21 13:31:40] -rw------- 1 boincer umatlas        784 Apr 21 13:31 2bbb77b9b6b0.diag
[2026-04-21 13:31:40] -rw-r--r-- 1 boincer umatlas      23310 Apr 21 13:31 stderr.txt
[2026-04-21 13:31:40] HITS file was successfully produced:
[2026-04-21 13:31:40] -rw------- 1 boincer umatlas 272541097 Apr 21 13:30 shared/HITS.pool.root.1
[2026-04-21 13:31:40]  *** Contents of shared directory: ***
[2026-04-21 13:31:40] total 2455724
[2026-04-21 13:31:40] -rw-r--r-- 3 boincer umatlas 2239200913 Apr 21 06:15 ATLAS.root_0
[2026-04-21 13:31:40] -rw-r--r-- 2 boincer umatlas      15665 Apr 21 06:15 start_atlas.sh
[2026-04-21 13:31:40] -rw-r--r-- 2 boincer umatlas     656922 Apr 21 06:15 input.tar.gz
[2026-04-21 13:31:40] -rw------- 1 boincer umatlas  272541097 Apr 21 13:30 HITS.pool.root.1
[2026-04-21 13:31:40] -rw------- 1 boincer umatlas    2232320 Apr 21 13:31 result.tar.gz
13:31:41 (20950): run_atlas exited; CPU time 138593.021810
13:31:41 (20950): called boinc_finish(0)

</stderr_txt>
]]>

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