Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:10:22 (3856948): wrapper (7.7.26015): starting
06:10:22 (3856948): wrapper: running run_atlas (--nthreads 9)
[2026-04-21 06:10:22] Arguments: --nthreads 9
[2026-04-21 06:10:22] Threads: 9
[2026-04-21 06:10:22] Checking for CVMFS
[2026-04-21 06:10:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-21 06:10:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-21 06:10:22] Running cvmfs_config stat atlas.cern.ch
[2026-04-21 06:10:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-21 06:10:23] 2.13.3.0 7219 169624 205220 158685 0 979 35767834 40960001 18044 16776704 0 607157895 99.689 546516524 35812 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-21 06:10:23] CVMFS is ok
[2026-04-21 06:10:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 06:10:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 06:10:23] Further information can be found at the LHC@home message board.
[2026-04-21 06:10:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 06:10:23] Checking for apptainer binary...
[2026-04-21 06:10:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-21 06:10:23] Running /usr/bin/apptainer --version
[2026-04-21 06:10:23] apptainer version 1.4.5-2.el9
[2026-04-21 06:10:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 06:10:23] c-212-13.aglt2.org
[2026-04-21 06:10:23] apptainer works
[2026-04-21 06:10:23] Set ATHENA_PROC_NUMBER=9
[2026-04-21 06:10:23] Set ATHENA_CORE_NUMBER=9
[2026-04-21 06:10:23] Starting ATLAS job with PandaID=7105104279
[2026-04-21 06:10:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-21 11:49:24]  *** The last 200 lines of the pilot log: ***
[2026-04-21 11:49:24] 2026-04-21 15:48:39,392 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-21 11:49:24] 2026-04-21 15:48:39,392 | INFO     | log transfer has been attempted: DONE
[2026-04-21 11:49:24] 2026-04-21 15:48:39,392 | INFO     | job 7105104279 has finished - writing final server update
[2026-04-21 11:49:24] 2026-04-21 15:48:39,392 | INFO     | total number of processed events: 400 (read)
[2026-04-21 11:49:24] 2026-04-21 15:48:39,407 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7105104279/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 11:49:24] 2026-04-21 15:48:39,408 | INFO     | extracted standard info from prmon json
[2026-04-21 11:49:24] 2026-04-21 15:48:39,408 | INFO     | extracted standard memory fields from prmon json
[2026-04-21 11:49:24] 2026-04-21 15:48:39,408 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-21 11:49:24] 2026-04-21 15:48:39,408 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-21 11:49:24] 2026-04-21 15:48:39,413 | INFO     | fitting pss+swap vs Time
[2026-04-21 11:49:24] 2026-04-21 15:48:39,413 | INFO     | sum of square deviations: 11347200663.0
[2026-04-21 11:49:24] 2026-04-21 15:48:39,416 | INFO     | sum of deviations: 72607902127.5
[2026-04-21 11:49:24] 2026-04-21 15:48:39,416 | INFO     | mean x (centered): 0.0
[2026-04-21 11:49:24] 2026-04-21 15:48:39,416 | INFO     | mean y: 2609268.4307228914
[2026-04-21 11:49:24] 2026-04-21 15:48:39,416 | INFO     | intersect: 2609268.4307228914
[2026-04-21 11:49:24] 2026-04-21 15:48:39,417 | INFO     | chi2: 1.2382833767886803
[2026-04-21 11:49:24] 2026-04-21 15:48:39,417 | INFO     | sum of square deviations: 10842205148.0
[2026-04-21 11:49:24] 2026-04-21 15:48:39,419 | INFO     | sum of deviations: 69571336127.0
[2026-04-21 11:49:24] 2026-04-21 15:48:39,419 | INFO     | mean x (centered): 0.0
[2026-04-21 11:49:24] 2026-04-21 15:48:39,419 | INFO     | mean y: 2608351.4587155962
[2026-04-21 11:49:24] 2026-04-21 15:48:39,420 | INFO     | intersect: 2608351.4587155962
[2026-04-21 11:49:24] 2026-04-21 15:48:39,420 | INFO     | chi2: 1.238376783907053
[2026-04-21 11:49:24] 2026-04-21 15:48:39,420 | INFO     | current chi2=1.238376783907053 (change=-0.007543274837051354 %)
[2026-04-21 11:49:24] 2026-04-21 15:48:39,420 | INFO     | right removable region: 326
[2026-04-21 11:49:24] 2026-04-21 15:48:39,420 | INFO     | sum of square deviations: 10842205148.0
[2026-04-21 11:49:24] 2026-04-21 15:48:39,423 | INFO     | sum of deviations: 22924473805.999996
[2026-04-21 11:49:24] 2026-04-21 15:48:39,423 | INFO     | mean x (centered): 0.0
[2026-04-21 11:49:24] 2026-04-21 15:48:39,423 | INFO     | mean y: 2624181.483180428
[2026-04-21 11:49:24] 2026-04-21 15:48:39,423 | INFO     | intersect: 2624181.483180428
[2026-04-21 11:49:24] 2026-04-21 15:48:39,423 | INFO     | chi2: 0.00363166498405972
[2026-04-21 11:49:24] 2026-04-21 15:48:39,423 | INFO     | current chi2=0.00363166498405972 (change=99.70671777945708 %)
[2026-04-21 11:49:24] 2026-04-21 15:48:39,424 | INFO     | sum of square deviations: 10352419220.5
[2026-04-21 11:49:24] 2026-04-21 15:48:39,426 | INFO     | sum of deviations: 19759272866.000004
[2026-04-21 11:49:24] 2026-04-21 15:48:39,426 | INFO     | mean x (centered): 0.0
[2026-04-21 11:49:24] 2026-04-21 15:48:39,426 | INFO     | mean y: 2625165.602484472
[2026-04-21 11:49:24] 2026-04-21 15:48:39,426 | INFO     | intersect: 2625165.602484472
[2026-04-21 11:49:24] 2026-04-21 15:48:39,427 | INFO     | chi2: 0.002110719832739465
[2026-04-21 11:49:24] 2026-04-21 15:48:39,427 | INFO     | current chi2=0.002110719832739465 (change=41.88010617708575 %)
[2026-04-21 11:49:24] 2026-04-21 15:48:39,427 | INFO     | sum of square deviations: 9877610318.0
[2026-04-21 11:49:24] 2026-04-21 15:48:39,429 | INFO     | sum of deviations: 18644417895.0
[2026-04-21 11:49:24] 2026-04-21 15:48:39,429 | INFO     | mean x (centered): 0.0
[2026-04-21 11:49:24] 2026-04-21 15:48:39,429 | INFO     | mean y: 2625523.123028391
[2026-04-21 11:49:24] 2026-04-21 15:48:39,429 | INFO     | intersect: 2625523.123028391
[2026-04-21 11:49:24] 2026-04-21 15:48:39,430 | INFO     | chi2: 0.0020501793669836
[2026-04-21 11:49:24] 2026-04-21 15:48:39,430 | INFO     | current chi2=0.0020501793669836 (change=2.8682378786999365 %)
[2026-04-21 11:49:24] 2026-04-21 15:48:39,430 | INFO     | left removable region: 15
[2026-04-21 11:49:24] 2026-04-21 15:48:39,430 | INFO     | sum of square deviations: 9327281860.0
[2026-04-21 11:49:24] 2026-04-21 15:48:39,433 | INFO     | sum of deviations: 16126039361.0
[2026-04-21 11:49:24] 2026-04-21 15:48:39,433 | INFO     | mean x (centered): 0.0
[2026-04-21 11:49:24] 2026-04-21 15:48:39,433 | INFO     | mean y: 2624685.7813504823
[2026-04-21 11:49:24] 2026-04-21 15:48:39,433 | INFO     | intersect: 2624685.7813504823
[2026-04-21 11:49:24] 2026-04-21 15:48:39,433 | INFO     | chi2: 0.0014469952766992889
[2026-04-21 11:49:24] 2026-04-21 15:48:39,433 | INFO     | current memory leak: 1.73 B/s (using 311 data points, chi2=0.00)
[2026-04-21 11:49:24] 2026-04-21 15:48:39,434 | INFO     | could have reported an average CPU frequency of 3174 MHz (15 samples)
[2026-04-21 11:49:24] 2026-04-21 15:48:39,434 | INFO     | ..............................
[2026-04-21 11:49:24] 2026-04-21 15:48:39,434 | INFO     | . Timing measurements:
[2026-04-21 11:49:24] 2026-04-21 15:48:39,434 | INFO     | . get job = 0 s
[2026-04-21 11:49:24] 2026-04-21 15:48:39,434 | INFO     | . initial setup = 8 s
[2026-04-21 11:49:24] 2026-04-21 15:48:39,434 | INFO     | . payload setup = 12 s
[2026-04-21 11:49:24] 2026-04-21 15:48:39,434 | INFO     | . stage-in = 0 s
[2026-04-21 11:49:24] 2026-04-21 15:48:39,434 | INFO     | . payload execution = 20250 s
[2026-04-21 11:49:24] 2026-04-21 15:48:39,435 | INFO     | . stage-out = 1 s
[2026-04-21 11:49:24] 2026-04-21 15:48:39,435 | INFO     | . log creation = 0 s
[2026-04-21 11:49:24] 2026-04-21 15:48:39,435 | INFO     | ..............................
[2026-04-21 11:49:24] 2026-04-21 15:48:39,515 | INFO     | 
[2026-04-21 11:49:24] 2026-04-21 15:48:39,515 | INFO     | job summary report
[2026-04-21 11:49:24] 2026-04-21 15:48:39,515 | INFO     | --------------------------------------------------
[2026-04-21 11:49:24] 2026-04-21 15:48:39,515 | INFO     | PanDA job id: 7105104279
[2026-04-21 11:49:24] 2026-04-21 15:48:39,515 | INFO     | task id: 49820375
[2026-04-21 11:49:24] 2026-04-21 15:48:39,515 | INFO     | errors: (none)
[2026-04-21 11:49:24] 2026-04-21 15:48:39,516 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-21 11:49:24] 2026-04-21 15:48:39,516 | INFO     | pilot state: finished 
[2026-04-21 11:49:24] 2026-04-21 15:48:39,516 | INFO     | transexitcode: 0
[2026-04-21 11:49:24] 2026-04-21 15:48:39,516 | INFO     | exeerrorcode: 0
[2026-04-21 11:49:24] 2026-04-21 15:48:39,516 | INFO     | exeerrordiag: 
[2026-04-21 11:49:24] 2026-04-21 15:48:39,516 | INFO     | exitcode: 0
[2026-04-21 11:49:24] 2026-04-21 15:48:39,516 | INFO     | exitmsg: OK
[2026-04-21 11:49:24] 2026-04-21 15:48:39,516 | INFO     | cpuconsumptiontime: 58920 s
[2026-04-21 11:49:24] 2026-04-21 15:48:39,516 | INFO     | nevents: 400
[2026-04-21 11:49:24] 2026-04-21 15:48:39,516 | INFO     | neventsw: 0
[2026-04-21 11:49:24] 2026-04-21 15:48:39,516 | INFO     | pid: 3868171
[2026-04-21 11:49:24] 2026-04-21 15:48:39,516 | INFO     | pgrp: 3868171
[2026-04-21 11:49:24] 2026-04-21 15:48:39,516 | INFO     | corecount: 9
[2026-04-21 11:49:24] 2026-04-21 15:48:39,516 | INFO     | event service: False
[2026-04-21 11:49:24] 2026-04-21 15:48:39,517 | INFO     | sizes: {0: 2281591, 1: 2283420, 20266: 2316980, 20268: 2319000, 20271: 2319056, 20274: 2319250}
[2026-04-21 11:49:24] 2026-04-21 15:48:39,517 | INFO     | --------------------------------------------------
[2026-04-21 11:49:24] 2026-04-21 15:48:39,517 | INFO     | 
[2026-04-21 11:49:24] 2026-04-21 15:48:39,517 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-04-21 11:49:24] 2026-04-21 15:48:39,549 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-21 11:49:24] 2026-04-21 15:48:39,549 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-21 11:49:24] 2026-04-21 15:48:39,550 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-21 11:49:24] 2026-04-21 15:48:39,550 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-21 11:49:24] 2026-04-21 15:48:39,550 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-21 11:49:24] 2026-04-21 15:48:39,550 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-21 11:49:24] 2026-04-21 15:48:39,550 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-21 11:49:24] 2026-04-21 15:48:39,550 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-21 11:49:24] 2026-04-21 15:48:39,550 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-21 11:49:24] 2026-04-21 15:48:39,550 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-21 11:49:24] 2026-04-21 15:48:39,550 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-21 11:49:24] 2026-04-21 15:48:39,550 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-21 11:49:24] 2026-04-21 15:48:39,550 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-21 11:49:24] 2026-04-21 15:48:39,550 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-21 11:49:24] 2026-04-21 15:48:39,550 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-21 11:49:24] 2026-04-21 15:48:39,551 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-21 11:49:24] 2026-04-21 15:48:39,551 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-21 11:49:24] 2026-04-21 15:48:39,551 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-21 11:49:24] 2026-04-21 15:48:39,551 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-21 11:49:24] 2026-04-21 15:48:39,551 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-21 11:49:24] 2026-04-21 15:48:39,551 | INFO     | job 7105104279 has completed (purged errors)
[2026-04-21 11:49:24] 2026-04-21 15:48:39,551 | INFO     | overall cleanup function is called
[2026-04-21 11:49:24] 2026-04-21 15:48:40,559 | INFO     | --- collectZombieJob: --- 10, [3868171]
[2026-04-21 11:49:24] 2026-04-21 15:48:40,559 | INFO     | zombie collector waiting for pid 3868171
[2026-04-21 11:49:24] 2026-04-21 15:48:40,559 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-21 11:49:24] 2026-04-21 15:48:40,560 | INFO     | collected zombie processes
[2026-04-21 11:49:24] 2026-04-21 15:48:40,560 | INFO     | will attempt to kill all subprocesses of pid=3868171
[2026-04-21 11:49:24] 2026-04-21 15:48:41,071 | INFO     | process IDs to be killed: [3868171] (in reverse order)
[2026-04-21 11:49:24] 2026-04-21 15:48:41,214 | WARNING  | found no corresponding commands to process id(s)
[2026-04-21 11:49:24] 2026-04-21 15:48:41,215 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-21 11:49:24] 2026-04-21 15:48:41,231 | INFO     | did not find any defunct processes belonging to 3868171
[2026-04-21 11:49:24] 2026-04-21 15:48:41,247 | INFO     | did not find any defunct processes belonging to 3868171
[2026-04-21 11:49:24] 2026-04-21 15:48:41,248 | INFO     | Ready for new job
[2026-04-21 11:49:24] 2026-04-21 15:48:41,250 | INFO     | **************************************
[2026-04-21 11:49:24] 2026-04-21 15:48:41,250 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-21 11:49:24] 2026-04-21 15:48:41,250 | INFO     | **************************************
[2026-04-21 11:49:24] 2026-04-21 15:48:41,250 | INFO     | 
[2026-04-21 11:49:24] 2026-04-21 15:48:41,255 | INFO     | architecture information:
[2026-04-21 11:49:24] 2026-04-21 15:48:41,255 | INFO     | executing command: cat /etc/os-release
[2026-04-21 11:49:24] 2026-04-21 15:48:41,275 | INFO     | cat /etc/os-release:
[2026-04-21 11:49:24] NAME="CentOS Linux"
[2026-04-21 11:49:24] VERSION="7 (Core)"
[2026-04-21 11:49:24] ID="centos"
[2026-04-21 11:49:24] ID_LIKE="rhel fedora"
[2026-04-21 11:49:24] VERSION_ID="7"
[2026-04-21 11:49:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-21 11:49:24] ANSI_COLOR="0;31"
[2026-04-21 11:49:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-21 11:49:24] HOME_URL="https://www.centos.org/"
[2026-04-21 11:49:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-21 11:49:24] 
[2026-04-21 11:49:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-21 11:49:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-21 11:49:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-21 11:49:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-21 11:49:24] 
[2026-04-21 11:49:24] 2026-04-21 15:48:41,276 | INFO     | **************************************
[2026-04-21 11:49:24] 2026-04-21 15:48:41,778 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-04-21 11:49:24] 2026-04-21 15:48:41,803 | INFO     | sufficient remaining disk space (125684416512 B)
[2026-04-21 11:49:24] 2026-04-21 15:48:41,804 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-21 11:49:24] 2026-04-21 15:48:41,804 | INFO     | current server update state: UPDATING_FINAL
[2026-04-21 11:49:24] 2026-04-21 15:48:41,804 | INFO     | update_server=False
[2026-04-21 11:49:24] 2026-04-21 15:48:41,804 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-21 11:49:24] 2026-04-21 15:48:41,804 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-21 11:49:24] 2026-04-21 15:48:41,804 | INFO     | aborting loop
[2026-04-21 11:49:24] 2026-04-21 15:48:41,985 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-21 11:49:24] 2026-04-21 15:48:42,502 | INFO     | all payload control threads have been joined
[2026-04-21 11:49:24] 2026-04-21 15:48:42,796 | INFO     | all data control threads have been joined
[2026-04-21 11:49:24] 2026-04-21 15:48:42,810 | INFO     | [job] retrieve thread has finished
[2026-04-21 11:49:24] 2026-04-21 15:48:42,811 | INFO     | [job] job monitor thread has finished
[2026-04-21 11:49:24] 2026-04-21 15:48:42,839 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-21 11:49:24] 2026-04-21 15:48:43,066 | INFO     | [job] validate thread has finished
[2026-04-21 11:49:24] 2026-04-21 15:48:43,158 | INFO     | [payload] failed_post thread has finished
[2026-04-21 11:49:24] 2026-04-21 15:48:43,334 | INFO     | [data] copytool_in thread has finished
[2026-04-21 11:49:24] 2026-04-21 15:48:43,355 | INFO     | [payload] execute_payloads thread has finished
[2026-04-21 11:49:24] 2026-04-21 15:48:43,508 | INFO     | [payload] control thread has finished
[2026-04-21 11:49:24] 2026-04-21 15:48:43,517 | INFO     | all job control threads have been joined
[2026-04-21 11:49:24] 2026-04-21 15:48:43,802 | INFO     | [data] control thread has finished
[2026-04-21 11:49:24] 2026-04-21 15:48:43,915 | INFO     | [job] create_data_payload thread has finished
[2026-04-21 11:49:24] 2026-04-21 15:48:43,991 | INFO     | [data] copytool_out thread has finished
[2026-04-21 11:49:24] 2026-04-21 15:48:44,155 | INFO     | [payload] validate_post thread has finished
[2026-04-21 11:49:24] 2026-04-21 15:48:44,293 | INFO     | [payload] validate_pre thread has finished
[2026-04-21 11:49:24] 2026-04-21 15:48:44,523 | INFO     | [job] control thread has finished
[2026-04-21 11:49:24] 2026-04-21 15:48:44,528 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-21 11:49:24] 2026-04-21 15:48:45,533 | INFO     | [job] queue monitor thread has finished
[2026-04-21 11:49:24] 2026-04-21 15:48:46,847 | INFO     | [data] queue_monitor thread has finished
[2026-04-21 11:49:24] 2026-04-21 15:48:52,598 | INFO     | job.realtimelogging is not enabled
[2026-04-21 11:49:24] 2026-04-21 15:48:53,606 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-21 11:49:24] 2026-04-21 15:49:10,340 | INFO     | 20284s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-04-21 11:49:24] 2026-04-21 15:49:11,850 | INFO     | PID=3862155 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-21 11:49:24] 2026-04-21 15:49:11,850 | INFO     | .. there are 20 such processes running
[2026-04-21 11:49:24] 2026-04-21 15:49:11,851 | INFO     | found 0 job(s) in 20 queues
[2026-04-21 11:49:24] 2026-04-21 15:49:11,851 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-21 11:49:24] 2026-04-21 15:49:11,851 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-21 11:49:24] 2026-04-21 15:49:18,253 | INFO     | [monitor] cgroup control has ended
[2026-04-21 11:49:24] 2026-04-21 15:49:19,259 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139786038642496)>', '<ExcThread(monitor, started 139785674942208)>']
[2026-04-21 11:49:24] 2026-04-21 15:49:19,890 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-21 11:49:24] 2026-04-21 15:49:19,890 | INFO     | [monitor] control thread has ended
[2026-04-21 11:49:24] 2026-04-21 15:49:24,285 | INFO     | all workflow threads have been joined
[2026-04-21 11:49:24] 2026-04-21 15:49:24,285 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-21 11:49:24] 2026-04-21 15:49:24,286 | INFO     | traces error code: 0
[2026-04-21 11:49:24] 2026-04-21 15:49:24,286 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-21 11:49:24] 2026-04-21 15:49:24,414 [wrapper] ==== pilot stdout END ====
[2026-04-21 11:49:24] 2026-04-21 15:49:24,419 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-21 11:49:24] 2026-04-21 15:49:24,423 [wrapper] pilotpid: 3862155
[2026-04-21 11:49:24] 2026-04-21 15:49:24,426 [wrapper] Pilot exit status: 0
[2026-04-21 11:49:24] 2026-04-21 15:49:24,440 [wrapper] pandaids: 7105104279
[2026-04-21 11:49:24] 2026-04-21 15:49:24,543 [wrapper] cleanup supervisor_pilot  898045 3862156
[2026-04-21 11:49:24] 2026-04-21 15:49:24,546 [wrapper] Test setup, not cleaning
[2026-04-21 11:49:24] 2026-04-21 15:49:24,549 [wrapper] apfmon messages muted
[2026-04-21 11:49:24] 2026-04-21 15:49:24,552 [wrapper] ==== wrapper stdout END ====
[2026-04-21 11:49:24] 2026-04-21 15:49:24,555 [wrapper] ==== wrapper stderr END ====
[2026-04-21 11:49:24]  *** Error codes and diagnostics ***
[2026-04-21 11:49:24]     "exeErrorCode": 0,
[2026-04-21 11:49:24]     "pilotErrorCode": 0,
[2026-04-21 11:49:24]  *** Listing of results directory ***
[2026-04-21 11:49:24] total 2455072
[2026-04-21 11:49:24] -rwx------. 1 boincer umatlas      36322 Apr 21 03:48 runpilot2-wrapper.sh
[2026-04-21 11:49:24] -rw-r--r--. 1 boincer umatlas     644190 Apr 21 05:10 pilot3.tar.gz
[2026-04-21 11:49:24] -rw-r--r--. 1 boincer umatlas       5094 Apr 21 05:22 queuedata.json
[2026-04-21 11:49:24] -rw-r--r--. 1 boincer umatlas        100 Apr 21 06:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-21 11:49:24] -rwxr-xr-x. 1 boincer umatlas       7986 Apr 21 06:10 run_atlas
[2026-04-21 11:49:24] -rw-r--r--. 1 boincer umatlas        105 Apr 21 06:10 job.xml
[2026-04-21 11:49:24] -rw-r--r--. 2 boincer umatlas 2232187498 Apr 21 06:10 EVNT.49820373._000020.pool.root.1
[2026-04-21 11:49:24] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 06:10 start_atlas.sh
[2026-04-21 11:49:24] drwxrwx--x. 2 boincer umatlas       4096 Apr 21 06:10 shared
[2026-04-21 11:49:24] -rw-r--r--. 2 boincer umatlas     656936 Apr 21 06:10 input.tar.gz
[2026-04-21 11:49:24] -rw-r--r--. 1 boincer umatlas          0 Apr 21 06:10 boinc_lockfile
[2026-04-21 11:49:24] -rw-r--r--. 1 boincer umatlas       2586 Apr 21 06:10 pandaJob.out
[2026-04-21 11:49:24] -rw-------. 1 boincer umatlas         57 Apr 21 06:10 setup.sh.local
[2026-04-21 11:49:24] -rw-------. 1 boincer umatlas     995850 Apr 21 06:10 agis_schedconf.cvmfs.json
[2026-04-21 11:49:24] -rw-------. 1 boincer umatlas        429 Apr 21 06:10 workernode_map.json
[2026-04-21 11:49:24] drwx------. 5 boincer umatlas       4096 Apr 21 06:10 pilot3
[2026-04-21 11:49:24] -rw-r--r--. 1 boincer umatlas        489 Apr 21 11:47 boinc_task_state.xml
[2026-04-21 11:49:24] -rw-------. 1 boincer umatlas  273110929 Apr 21 11:47 HITS.49820375._009850.pool.root.1
[2026-04-21 11:49:24] -rw-------. 1 boincer umatlas       1050 Apr 21 11:48 memory_monitor_summary.json
[2026-04-21 11:49:24] -rw-------. 1 boincer umatlas    1509089 Apr 21 11:48 agis_ddmendpoints.agis.ALL.json
[2026-04-21 11:49:24] -rw-------. 1 boincer umatlas     524246 Apr 21 11:48 log.49820375._009850.job.log.tgz.1
[2026-04-21 11:49:24] -rw-r--r--. 1 boincer umatlas       6874 Apr 21 11:48 init_data.xml
[2026-04-21 11:49:24] -rw-------. 1 boincer umatlas       6370 Apr 21 11:48 heartbeat_new.json
[2026-04-21 11:49:24] -rw-------. 1 boincer umatlas       6261 Apr 21 11:48 heartbeat.json
[2026-04-21 11:49:24] -rw-------. 1 boincer umatlas         95 Apr 21 11:49 pilot_heartbeat.json
[2026-04-21 11:49:24] -rw-r--r--. 1 boincer umatlas       8192 Apr 21 11:49 boinc_mmap_file
[2026-04-21 11:49:24] -rw-r--r--. 1 boincer umatlas         28 Apr 21 11:49 wrapper_checkpoint.txt
[2026-04-21 11:49:24] -rw-------. 1 boincer umatlas       5008 Apr 21 11:49 pilotlog.txt
[2026-04-21 11:49:24] -rw-------. 1 boincer umatlas    1796141 Apr 21 11:49 log.49820375._009850.job.log.1
[2026-04-21 11:49:24] -rw-------. 1 boincer umatlas        357 Apr 21 11:49 output.list
[2026-04-21 11:49:24] -rw-r--r--. 1 boincer umatlas        410 Apr 21 11:49 runtime_log
[2026-04-21 11:49:24] -rw-------. 1 boincer umatlas    2334720 Apr 21 11:49 result.tar.gz
[2026-04-21 11:49:24] -rw-r--r--. 1 boincer umatlas       8964 Apr 21 11:49 runtime_log.err
[2026-04-21 11:49:24] -rw-------. 1 boincer umatlas        663 Apr 21 11:49 2ba268201bbd.diag
[2026-04-21 11:49:24] -rw-r--r--. 1 boincer umatlas      20992 Apr 21 11:49 stderr.txt
[2026-04-21 11:49:24] HITS file was successfully produced:
[2026-04-21 11:49:24] -rw-------. 1 boincer umatlas 273110929 Apr 21 11:47 shared/HITS.pool.root.1
[2026-04-21 11:49:24]  *** Contents of shared directory: ***
[2026-04-21 11:49:24] total 2449532
[2026-04-21 11:49:24] -rw-r--r--. 2 boincer umatlas 2232187498 Apr 21 06:10 ATLAS.root_0
[2026-04-21 11:49:24] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 06:10 start_atlas.sh
[2026-04-21 11:49:24] -rw-r--r--. 2 boincer umatlas     656936 Apr 21 06:10 input.tar.gz
[2026-04-21 11:49:24] -rw-------. 1 boincer umatlas  273110929 Apr 21 11:47 HITS.pool.root.1
[2026-04-21 11:49:24] -rw-------. 1 boincer umatlas    2334720 Apr 21 11:49 result.tar.gz
11:49:26 (3856948): run_atlas exited; CPU time 59706.806475
11:49:26 (3856948): called boinc_finish(0)

</stderr_txt>
]]>

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