Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:07:16 (3447966): wrapper (7.7.26015): starting
06:07:16 (3447966): wrapper: running run_atlas (--nthreads 9)
[2026-04-21 06:07:16] Arguments: --nthreads 9
[2026-04-21 06:07:16] Threads: 9
[2026-04-21 06:07:16] Checking for CVMFS
[2026-04-21 06:07:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-21 06:07:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-21 06:07:16] Running cvmfs_config stat atlas.cern.ch
[2026-04-21 06:07:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-21 06:07:17] 2.13.3.0 11285 240104 282800 158685 2 921 22469454 32935937 25914 16776704 0 1443628752 99.594 1594865107 34240 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-21 06:07:17] CVMFS is ok
[2026-04-21 06:07:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 06:07:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 06:07:17] Further information can be found at the LHC@home message board.
[2026-04-21 06:07:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 06:07:17] Checking for apptainer binary...
[2026-04-21 06:07:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-21 06:07:17] Running /usr/bin/apptainer --version
[2026-04-21 06:07:17] apptainer version 1.4.5-2.el9
[2026-04-21 06:07:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 06:07:17] c7-3-29.aglt2.org
[2026-04-21 06:07:17] apptainer works
[2026-04-21 06:07:17] Set ATHENA_PROC_NUMBER=9
[2026-04-21 06:07:17] Set ATHENA_CORE_NUMBER=9
[2026-04-21 06:07:17] Starting ATLAS job with PandaID=7105104190
[2026-04-21 06:07:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-21 10:52:19]  *** The last 200 lines of the pilot log: ***
[2026-04-21 10:52:19] 2026-04-21 14:51:28,470 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-21 10:52:19] 2026-04-21 14:51:28,470 | INFO     | log transfer has been attempted: DONE
[2026-04-21 10:52:19] 2026-04-21 14:51:28,470 | INFO     | job 7105104190 has finished - writing final server update
[2026-04-21 10:52:19] 2026-04-21 14:51:28,471 | INFO     | total number of processed events: 400 (read)
[2026-04-21 10:52:19] 2026-04-21 14:51:28,661 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7105104190/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 10:52:19] 2026-04-21 14:51:28,730 | INFO     | extracted standard info from prmon json
[2026-04-21 10:52:19] 2026-04-21 14:51:28,730 | INFO     | extracted standard memory fields from prmon json
[2026-04-21 10:52:19] 2026-04-21 14:51:28,755 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-21 10:52:19] 2026-04-21 14:51:28,758 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-21 10:52:19] 2026-04-21 14:51:28,807 | INFO     | fitting pss+swap vs Time
[2026-04-21 10:52:19] 2026-04-21 14:51:28,808 | INFO     | sum of square deviations: 6734199314.910435
[2026-04-21 10:52:19] 2026-04-21 14:51:28,810 | INFO     | sum of deviations: 3334351128.799309
[2026-04-21 10:52:19] 2026-04-21 14:51:28,810 | INFO     | mean x (centered): 0.0
[2026-04-21 10:52:19] 2026-04-21 14:51:28,810 | INFO     | mean y: 2547053.240143369
[2026-04-21 10:52:19] 2026-04-21 14:51:28,810 | INFO     | intersect: 2547053.240143369
[2026-04-21 10:52:19] 2026-04-21 14:51:28,811 | INFO     | chi2: 4.611740297585814
[2026-04-21 10:52:19] 2026-04-21 14:51:28,862 | INFO     | sum of square deviations: 6378577396.441568
[2026-04-21 10:52:19] 2026-04-21 14:51:28,864 | INFO     | sum of deviations: 74894612384.74454
[2026-04-21 10:52:19] 2026-04-21 14:51:28,865 | INFO     | mean x (centered): 0.0
[2026-04-21 10:52:19] 2026-04-21 14:51:28,865 | INFO     | mean y: 2577627.313868613
[2026-04-21 10:52:19] 2026-04-21 14:51:28,865 | INFO     | intersect: 2577627.313868613
[2026-04-21 10:52:19] 2026-04-21 14:51:28,865 | INFO     | chi2: 1.7378011019121717
[2026-04-21 10:52:19] 2026-04-21 14:51:28,865 | INFO     | current chi2=1.7378011019121717 (change=62.31788891447578 %)
[2026-04-21 10:52:19] 2026-04-21 14:51:28,866 | INFO     | sum of square deviations: 6035699780.966553
[2026-04-21 10:52:19] 2026-04-21 14:51:28,873 | INFO     | sum of deviations: 73397368627.08551
[2026-04-21 10:52:19] 2026-04-21 14:51:28,873 | INFO     | mean x (centered): 0.0
[2026-04-21 10:52:19] 2026-04-21 14:51:28,873 | INFO     | mean y: 2576961.3048327137
[2026-04-21 10:52:19] 2026-04-21 14:51:28,873 | INFO     | intersect: 2576961.3048327137
[2026-04-21 10:52:19] 2026-04-21 14:51:28,873 | INFO     | chi2: 1.7376444762488281
[2026-04-21 10:52:19] 2026-04-21 14:51:28,873 | INFO     | current chi2=1.7376444762488281 (change=0.009012864773263301 %)
[2026-04-21 10:52:19] 2026-04-21 14:51:28,874 | INFO     | right removable region: 268
[2026-04-21 10:52:19] 2026-04-21 14:51:28,874 | INFO     | sum of square deviations: 6378591122.408743
[2026-04-21 10:52:19] 2026-04-21 14:51:28,876 | INFO     | sum of deviations: -48839103036.31387
[2026-04-21 10:52:19] 2026-04-21 14:51:28,876 | INFO     | mean x (centered): 0.0
[2026-04-21 10:52:19] 2026-04-21 14:51:28,876 | INFO     | mean y: 2569285.2627737224
[2026-04-21 10:52:19] 2026-04-21 14:51:28,876 | INFO     | intersect: 2569285.2627737224
[2026-04-21 10:52:19] 2026-04-21 14:51:28,896 | INFO     | chi2: 2.96682319061851
[2026-04-21 10:52:19] 2026-04-21 14:51:28,896 | INFO     | current chi2=2.96682319061851 (change=35.66803420887331 %)
[2026-04-21 10:52:19] 2026-04-21 14:51:28,897 | INFO     | sum of square deviations: 6035727354.907104
[2026-04-21 10:52:19] 2026-04-21 14:51:28,898 | INFO     | sum of deviations: -55259693135.8067
[2026-04-21 10:52:19] 2026-04-21 14:51:28,898 | INFO     | mean x (centered): 0.0
[2026-04-21 10:52:19] 2026-04-21 14:51:28,899 | INFO     | mean y: 2572120.56133829
[2026-04-21 10:52:19] 2026-04-21 14:51:28,899 | INFO     | intersect: 2572120.56133829
[2026-04-21 10:52:19] 2026-04-21 14:51:28,899 | INFO     | chi2: 2.9343717294026503
[2026-04-21 10:52:19] 2026-04-21 14:51:28,899 | INFO     | current chi2=2.9343717294026503 (change=1.0938117687119198 %)
[2026-04-21 10:52:19] 2026-04-21 14:51:28,899 | INFO     | left removable region: 10
[2026-04-21 10:52:19] 2026-04-21 14:51:28,899 | INFO     | sum of square deviations: 5325115508.465115
[2026-04-21 10:52:19] 2026-04-21 14:51:28,921 | INFO     | sum of deviations: 14332666892.069773
[2026-04-21 10:52:19] 2026-04-21 14:51:28,921 | INFO     | mean x (centered): 0.0
[2026-04-21 10:52:19] 2026-04-21 14:51:28,921 | INFO     | mean y: 2604115.1434108526
[2026-04-21 10:52:19] 2026-04-21 14:51:28,921 | INFO     | intersect: 2604115.1434108526
[2026-04-21 10:52:19] 2026-04-21 14:51:28,922 | INFO     | chi2: 0.005969922393167779
[2026-04-21 10:52:19] 2026-04-21 14:51:28,922 | INFO     | current memory leak: 2.69 B/s (using 258 data points, chi2=0.01)
[2026-04-21 10:52:19] 2026-04-21 14:51:28,922 | INFO     | could have reported an average CPU frequency of 3145 MHz (13 samples)
[2026-04-21 10:52:19] 2026-04-21 14:51:28,922 | INFO     | ..............................
[2026-04-21 10:52:19] 2026-04-21 14:51:28,922 | INFO     | . Timing measurements:
[2026-04-21 10:52:19] 2026-04-21 14:51:28,922 | INFO     | . get job = 0 s
[2026-04-21 10:52:19] 2026-04-21 14:51:28,922 | INFO     | . initial setup = 9 s
[2026-04-21 10:52:19] 2026-04-21 14:51:28,923 | INFO     | . payload setup = 20 s
[2026-04-21 10:52:19] 2026-04-21 14:51:28,923 | INFO     | . stage-in = 0 s
[2026-04-21 10:52:19] 2026-04-21 14:51:28,923 | INFO     | . payload execution = 16979 s
[2026-04-21 10:52:19] 2026-04-21 14:51:28,923 | INFO     | . stage-out = 8 s
[2026-04-21 10:52:19] 2026-04-21 14:51:28,923 | INFO     | . log creation = 1 s
[2026-04-21 10:52:19] 2026-04-21 14:51:28,923 | INFO     | ..............................
[2026-04-21 10:52:19] 2026-04-21 14:51:30,227 | INFO     | 
[2026-04-21 10:52:19] 2026-04-21 14:51:30,227 | INFO     | job summary report
[2026-04-21 10:52:19] 2026-04-21 14:51:30,227 | INFO     | --------------------------------------------------
[2026-04-21 10:52:19] 2026-04-21 14:51:30,228 | INFO     | PanDA job id: 7105104190
[2026-04-21 10:52:19] 2026-04-21 14:51:30,228 | INFO     | task id: 49820375
[2026-04-21 10:52:19] 2026-04-21 14:51:30,228 | INFO     | errors: (none)
[2026-04-21 10:52:19] 2026-04-21 14:51:30,228 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-21 10:52:19] 2026-04-21 14:51:30,228 | INFO     | pilot state: finished 
[2026-04-21 10:52:19] 2026-04-21 14:51:30,228 | INFO     | transexitcode: 0
[2026-04-21 10:52:19] 2026-04-21 14:51:30,228 | INFO     | exeerrorcode: 0
[2026-04-21 10:52:19] 2026-04-21 14:51:30,228 | INFO     | exeerrordiag: 
[2026-04-21 10:52:19] 2026-04-21 14:51:30,228 | INFO     | exitcode: 0
[2026-04-21 10:52:19] 2026-04-21 14:51:30,228 | INFO     | exitmsg: OK
[2026-04-21 10:52:19] 2026-04-21 14:51:30,228 | INFO     | cpuconsumptiontime: 59248 s
[2026-04-21 10:52:19] 2026-04-21 14:51:30,228 | INFO     | nevents: 400
[2026-04-21 10:52:19] 2026-04-21 14:51:30,228 | INFO     | neventsw: 0
[2026-04-21 10:52:19] 2026-04-21 14:51:30,229 | INFO     | pid: 3471800
[2026-04-21 10:52:19] 2026-04-21 14:51:30,229 | INFO     | pgrp: 3471800
[2026-04-21 10:52:19] 2026-04-21 14:51:30,229 | INFO     | corecount: 9
[2026-04-21 10:52:19] 2026-04-21 14:51:30,229 | INFO     | event service: False
[2026-04-21 10:52:19] 2026-04-21 14:51:30,229 | INFO     | sizes: {0: 2281591, 1: 2283420, 12: 2283420, 17005: 2315399, 17015: 2317475, 17017: 2317613}
[2026-04-21 10:52:19] 2026-04-21 14:51:30,229 | INFO     | --------------------------------------------------
[2026-04-21 10:52:19] 2026-04-21 14:51:30,229 | INFO     | 
[2026-04-21 10:52:19] 2026-04-21 14:51:30,229 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-04-21 10:52:19] 2026-04-21 14:51:30,439 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-21 10:52:19] 2026-04-21 14:51:30,439 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-21 10:52:19] 2026-04-21 14:51:30,439 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-21 10:52:19] 2026-04-21 14:51:30,439 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-21 10:52:19] 2026-04-21 14:51:30,439 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-21 10:52:19] 2026-04-21 14:51:30,439 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-21 10:52:19] 2026-04-21 14:51:30,439 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-21 10:52:19] 2026-04-21 14:51:30,439 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-21 10:52:19] 2026-04-21 14:51:30,440 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-21 10:52:19] 2026-04-21 14:51:30,440 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-21 10:52:19] 2026-04-21 14:51:30,440 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-21 10:52:19] 2026-04-21 14:51:30,440 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-21 10:52:19] 2026-04-21 14:51:30,440 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-21 10:52:19] 2026-04-21 14:51:30,440 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-21 10:52:19] 2026-04-21 14:51:30,440 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-21 10:52:19] 2026-04-21 14:51:30,440 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-21 10:52:19] 2026-04-21 14:51:30,440 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-21 10:52:19] 2026-04-21 14:51:30,440 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-21 10:52:19] 2026-04-21 14:51:30,440 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-21 10:52:19] 2026-04-21 14:51:30,440 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-21 10:52:19] 2026-04-21 14:51:30,441 | INFO     | job 7105104190 has completed (purged errors)
[2026-04-21 10:52:19] 2026-04-21 14:51:30,441 | INFO     | overall cleanup function is called
[2026-04-21 10:52:19] 2026-04-21 14:51:31,725 | INFO     | --- collectZombieJob: --- 10, [3471800]
[2026-04-21 10:52:19] 2026-04-21 14:51:31,725 | INFO     | zombie collector waiting for pid 3471800
[2026-04-21 10:52:19] 2026-04-21 14:51:31,725 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-21 10:52:19] 2026-04-21 14:51:31,726 | INFO     | collected zombie processes
[2026-04-21 10:52:19] 2026-04-21 14:51:31,726 | INFO     | will attempt to kill all subprocesses of pid=3471800
[2026-04-21 10:52:19] 2026-04-21 14:51:35,356 | INFO     | PID=3455606 has CPU usage=12.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-21 10:52:19] 2026-04-21 14:51:35,356 | INFO     | .. there are 31 such processes running
[2026-04-21 10:52:19] 2026-04-21 14:51:35,670 | INFO     | process IDs to be killed: [3471800] (in reverse order)
[2026-04-21 10:52:19] 2026-04-21 14:51:36,029 | WARNING  | found no corresponding commands to process id(s)
[2026-04-21 10:52:19] 2026-04-21 14:51:36,031 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-21 10:52:19] 2026-04-21 14:51:36,149 | INFO     | did not find any defunct processes belonging to 3471800
[2026-04-21 10:52:19] 2026-04-21 14:51:36,315 | INFO     | did not find any defunct processes belonging to 3471800
[2026-04-21 10:52:19] 2026-04-21 14:51:36,318 | INFO     | Ready for new job
[2026-04-21 10:52:19] 2026-04-21 14:51:36,333 | INFO     | **************************************
[2026-04-21 10:52:19] 2026-04-21 14:51:36,333 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-21 10:52:19] 2026-04-21 14:51:36,333 | INFO     | **************************************
[2026-04-21 10:52:19] 2026-04-21 14:51:36,333 | INFO     | 
[2026-04-21 10:52:19] 2026-04-21 14:51:36,359 | INFO     | architecture information:
[2026-04-21 10:52:19] 2026-04-21 14:51:36,366 | INFO     | executing command: cat /etc/os-release
[2026-04-21 10:52:19] 2026-04-21 14:51:36,458 | INFO     | cat /etc/os-release:
[2026-04-21 10:52:19] NAME="CentOS Linux"
[2026-04-21 10:52:19] VERSION="7 (Core)"
[2026-04-21 10:52:19] ID="centos"
[2026-04-21 10:52:19] ID_LIKE="rhel fedora"
[2026-04-21 10:52:19] VERSION_ID="7"
[2026-04-21 10:52:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-21 10:52:19] ANSI_COLOR="0;31"
[2026-04-21 10:52:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-21 10:52:19] HOME_URL="https://www.centos.org/"
[2026-04-21 10:52:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-21 10:52:19] 
[2026-04-21 10:52:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-21 10:52:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-21 10:52:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-21 10:52:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-21 10:52:19] 
[2026-04-21 10:52:19] 2026-04-21 14:51:36,461 | INFO     | **************************************
[2026-04-21 10:52:19] 2026-04-21 14:51:36,965 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-04-21 10:52:19] 2026-04-21 14:51:37,033 | INFO     | sufficient remaining disk space (49157242880 B)
[2026-04-21 10:52:19] 2026-04-21 14:51:37,033 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-21 10:52:19] 2026-04-21 14:51:37,033 | INFO     | current server update state: UPDATING_FINAL
[2026-04-21 10:52:19] 2026-04-21 14:51:37,033 | INFO     | update_server=False
[2026-04-21 10:52:19] 2026-04-21 14:51:37,033 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-21 10:52:19] 2026-04-21 14:51:37,034 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-21 10:52:19] 2026-04-21 14:51:37,034 | INFO     | aborting loop
[2026-04-21 10:52:19] 2026-04-21 14:51:37,042 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-21 10:52:19] 2026-04-21 14:51:37,321 | INFO     | all payload control threads have been joined
[2026-04-21 10:52:19] 2026-04-21 14:51:37,637 | INFO     | all data control threads have been joined
[2026-04-21 10:52:19] 2026-04-21 14:51:38,039 | INFO     | [job] retrieve thread has finished
[2026-04-21 10:52:19] 2026-04-21 14:51:38,040 | INFO     | [job] job monitor thread has finished
[2026-04-21 10:52:19] 2026-04-21 14:51:38,152 | INFO     | all job control threads have been joined
[2026-04-21 10:52:19] 2026-04-21 14:51:38,272 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-21 10:52:19] 2026-04-21 14:51:38,276 | INFO     | [payload] execute_payloads thread has finished
[2026-04-21 10:52:19] 2026-04-21 14:51:38,279 | INFO     | [data] copytool_in thread has finished
[2026-04-21 10:52:19] 2026-04-21 14:51:38,349 | INFO     | [payload] control thread has finished
[2026-04-21 10:52:19] 2026-04-21 14:51:38,650 | INFO     | [data] control thread has finished
[2026-04-21 10:52:19] 2026-04-21 14:51:39,064 | INFO     | [data] copytool_out thread has finished
[2026-04-21 10:52:19] 2026-04-21 14:51:39,097 | INFO     | [job] create_data_payload thread has finished
[2026-04-21 10:52:19] 2026-04-21 14:51:39,148 | INFO     | [payload] validate_post thread has finished
[2026-04-21 10:52:19] 2026-04-21 14:51:39,152 | INFO     | [payload] failed_post thread has finished
[2026-04-21 10:52:19] 2026-04-21 14:51:39,159 | INFO     | [job] control thread has finished
[2026-04-21 10:52:19] 2026-04-21 14:51:39,276 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-21 10:52:19] 2026-04-21 14:51:39,427 | INFO     | [payload] validate_pre thread has finished
[2026-04-21 10:52:19] 2026-04-21 14:51:39,446 | INFO     | [job] validate thread has finished
[2026-04-21 10:52:19] 2026-04-21 14:51:39,452 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-21 10:52:19] 2026-04-21 14:51:40,283 | INFO     | [job] queue monitor thread has finished
[2026-04-21 10:52:19] 2026-04-21 14:51:43,463 | INFO     | [data] queue_monitor thread has finished
[2026-04-21 10:52:19] 2026-04-21 14:52:10,705 | INFO     | PID=3455606 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-21 10:52:19] 2026-04-21 14:52:10,705 | INFO     | .. there are 31 such processes running
[2026-04-21 10:52:19] 2026-04-21 14:52:10,706 | INFO     | found 0 job(s) in 20 queues
[2026-04-21 10:52:19] 2026-04-21 14:52:10,706 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-21 10:52:19] 2026-04-21 14:52:10,706 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-21 10:52:19] 2026-04-21 14:52:10,800 | INFO     | [monitor] cgroup control has ended
[2026-04-21 10:52:19] 2026-04-21 14:52:12,195 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139757976737600)>', '<ExcThread(monitor, started 139757355001600)>']
[2026-04-21 10:52:19] 2026-04-21 14:52:12,721 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-21 10:52:19] 2026-04-21 14:52:12,721 | INFO     | [monitor] control thread has ended
[2026-04-21 10:52:19] 2026-04-21 14:52:17,231 | INFO     | all workflow threads have been joined
[2026-04-21 10:52:19] 2026-04-21 14:52:17,231 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-21 10:52:19] 2026-04-21 14:52:17,232 | INFO     | traces error code: 0
[2026-04-21 10:52:19] 2026-04-21 14:52:17,232 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-21 10:52:19] 2026-04-21 14:52:18,328 [wrapper] ==== pilot stdout END ====
[2026-04-21 10:52:19] 2026-04-21 14:52:18,363 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-21 10:52:19] 2026-04-21 14:52:18,391 [wrapper] pilotpid: 3455606
[2026-04-21 10:52:19] 2026-04-21 14:52:18,416 [wrapper] Pilot exit status: 0
[2026-04-21 10:52:19] 2026-04-21 14:52:18,572 [wrapper] pandaids: 7105104190
[2026-04-21 10:52:19] 2026-04-21 14:52:18,846 [wrapper] cleanup supervisor_pilot  961467 3455607
[2026-04-21 10:52:19] 2026-04-21 14:52:18,859 [wrapper] Test setup, not cleaning
[2026-04-21 10:52:19] 2026-04-21 14:52:18,892 [wrapper] apfmon messages muted
[2026-04-21 10:52:19] 2026-04-21 14:52:18,929 [wrapper] ==== wrapper stdout END ====
[2026-04-21 10:52:19] 2026-04-21 14:52:18,967 [wrapper] ==== wrapper stderr END ====
[2026-04-21 10:52:19]  *** Error codes and diagnostics ***
[2026-04-21 10:52:19]     "exeErrorCode": 0,
[2026-04-21 10:52:19]     "pilotErrorCode": 0,
[2026-04-21 10:52:19]  *** Listing of results directory ***
[2026-04-21 10:52:19] total 2456764
[2026-04-21 10:52:19] -rwx------. 1 boincer umatlas      36322 Apr 21 03:48 runpilot2-wrapper.sh
[2026-04-21 10:52:19] -rw-r--r--. 1 boincer umatlas     644190 Apr 21 05:10 pilot3.tar.gz
[2026-04-21 10:52:19] -rw-r--r--. 1 boincer umatlas       5094 Apr 21 05:22 queuedata.json
[2026-04-21 10:52:19] -rw-r--r--. 1 boincer umatlas        100 Apr 21 06:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-21 10:52:19] -rwxr-xr-x. 1 boincer umatlas       7986 Apr 21 06:07 run_atlas
[2026-04-21 10:52:19] -rw-r--r--. 1 boincer umatlas        105 Apr 21 06:07 job.xml
[2026-04-21 10:52:19] -rw-r--r--. 2 boincer umatlas 2230001155 Apr 21 06:07 EVNT.49820373._000017.pool.root.1
[2026-04-21 10:52:19] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 06:07 start_atlas.sh
[2026-04-21 10:52:19] drwxrwx--x. 2 boincer umatlas       4096 Apr 21 06:07 shared
[2026-04-21 10:52:19] -rw-r--r--. 2 boincer umatlas     656934 Apr 21 06:07 input.tar.gz
[2026-04-21 10:52:19] -rw-r--r--. 1 boincer umatlas          0 Apr 21 06:07 boinc_lockfile
[2026-04-21 10:52:19] -rw-r--r--. 1 boincer umatlas       2586 Apr 21 06:07 pandaJob.out
[2026-04-21 10:52:19] -rw-------. 1 boincer umatlas         57 Apr 21 06:07 setup.sh.local
[2026-04-21 10:52:19] -rw-------. 1 boincer umatlas     995850 Apr 21 06:07 agis_schedconf.cvmfs.json
[2026-04-21 10:52:19] -rw-------. 1 boincer umatlas        429 Apr 21 06:07 workernode_map.json
[2026-04-21 10:52:19] drwx------. 5 boincer umatlas       4096 Apr 21 06:07 pilot3
[2026-04-21 10:52:19] -rw-------. 1 boincer umatlas  277845983 Apr 21 10:46 HITS.49820375._009761.pool.root.1
[2026-04-21 10:52:19] -rw-r--r--. 1 boincer umatlas        489 Apr 21 10:47 boinc_task_state.xml
[2026-04-21 10:52:19] -rw-r--r--. 1 boincer umatlas       6861 Apr 21 10:49 init_data.xml
[2026-04-21 10:52:19] -rw-------. 1 boincer umatlas       1051 Apr 21 10:51 memory_monitor_summary.json
[2026-04-21 10:52:19] -rw-------. 1 boincer umatlas         95 Apr 21 10:51 pilot_heartbeat.json
[2026-04-21 10:52:19] -rw-------. 1 boincer umatlas    1509089 Apr 21 10:51 agis_ddmendpoints.agis.ALL.json
[2026-04-21 10:52:19] -rw-------. 1 boincer umatlas     524593 Apr 21 10:51 log.49820375._009761.job.log.tgz.1
[2026-04-21 10:52:19] -rw-------. 1 boincer umatlas       6375 Apr 21 10:51 heartbeat_new.json
[2026-04-21 10:52:19] -rw-------. 1 boincer umatlas       6266 Apr 21 10:51 heartbeat.json
[2026-04-21 10:52:19] -rw-r--r--. 1 boincer umatlas       8192 Apr 21 10:52 boinc_mmap_file
[2026-04-21 10:52:19] -rw-r--r--. 1 boincer umatlas         28 Apr 21 10:52 wrapper_checkpoint.txt
[2026-04-21 10:52:19] -rw-------. 1 boincer umatlas       4819 Apr 21 10:52 pilotlog.txt
[2026-04-21 10:52:19] -rw-------. 1 boincer umatlas    1386356 Apr 21 10:52 log.49820375._009761.job.log.1
[2026-04-21 10:52:19] -rw-------. 1 boincer umatlas        357 Apr 21 10:52 output.list
[2026-04-21 10:52:19] -rw-r--r--. 1 boincer umatlas        410 Apr 21 10:52 runtime_log
[2026-04-21 10:52:19] -rw-------. 1 boincer umatlas    1925120 Apr 21 10:52 result.tar.gz
[2026-04-21 10:52:19] -rw-r--r--. 1 boincer umatlas       8959 Apr 21 10:52 runtime_log.err
[2026-04-21 10:52:19] -rw-------. 1 boincer umatlas        661 Apr 21 10:52 2b9e0970a400.diag
[2026-04-21 10:52:19] -rw-r--r--. 1 boincer umatlas      21108 Apr 21 10:52 stderr.txt
[2026-04-21 10:52:19] HITS file was successfully produced:
[2026-04-21 10:52:19] -rw-------. 1 boincer umatlas 277845983 Apr 21 10:46 shared/HITS.pool.root.1
[2026-04-21 10:52:19]  *** Contents of shared directory: ***
[2026-04-21 10:52:19] total 2451620
[2026-04-21 10:52:19] -rw-r--r--. 2 boincer umatlas 2230001155 Apr 21 06:07 ATLAS.root_0
[2026-04-21 10:52:19] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 06:07 start_atlas.sh
[2026-04-21 10:52:19] -rw-r--r--. 2 boincer umatlas     656934 Apr 21 06:07 input.tar.gz
[2026-04-21 10:52:19] -rw-------. 1 boincer umatlas  277845983 Apr 21 10:46 HITS.pool.root.1
[2026-04-21 10:52:19] -rw-------. 1 boincer umatlas    1925120 Apr 21 10:52 result.tar.gz
10:52:20 (3447966): run_atlas exited; CPU time 59838.782448
10:52:20 (3447966): called boinc_finish(0)

</stderr_txt>
]]>

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