Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:02:27 (2768485): wrapper (7.7.26015): starting
06:02:27 (2768485): wrapper: running run_atlas (--nthreads 10)
[2026-04-21 06:02:27] Arguments: --nthreads 10
[2026-04-21 06:02:27] Threads: 10
[2026-04-21 06:02:27] Checking for CVMFS
[2026-04-21 06:02:27] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-21 06:02:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-21 06:02:27] Running cvmfs_config stat atlas.cern.ch
[2026-04-21 06:02:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-21 06:02:27] 2.13.3.0 11793 240145 616264 158685 1 382 16583862 32935936 21025 16776704 0 929665546 99.584 1107847631 33609 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-21 06:02:27] CVMFS is ok
[2026-04-21 06:02:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 06:02:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 06:02:27] Further information can be found at the LHC@home message board.
[2026-04-21 06:02:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 06:02:27] Checking for apptainer binary...
[2026-04-21 06:02:27] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-21 06:02:27] Running /usr/bin/apptainer --version
[2026-04-21 06:02:27] apptainer version 1.4.5-2.el9
[2026-04-21 06:02:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 06:02:27] c6-2-11-2.aglt2.org
[2026-04-21 06:02:27] apptainer works
[2026-04-21 06:02:27] Set ATHENA_PROC_NUMBER=10
[2026-04-21 06:02:27] Set ATHENA_CORE_NUMBER=10
[2026-04-21 06:02:27] Starting ATLAS job with PandaID=7104906060
[2026-04-21 06:02:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-21 10:40:21]  *** The last 200 lines of the pilot log: ***
[2026-04-21 10:40:21] 2026-04-21 14:39:45,674 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-21 10:40:21] 2026-04-21 14:39:45,674 | INFO     | log transfer has been attempted: DONE
[2026-04-21 10:40:21] 2026-04-21 14:39:45,674 | INFO     | job 7104906060 has finished - writing final server update
[2026-04-21 10:40:21] 2026-04-21 14:39:45,674 | INFO     | total number of processed events: 400 (read)
[2026-04-21 10:40:21] 2026-04-21 14:39:45,691 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7104906060/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 10:40:21] 2026-04-21 14:39:45,691 | INFO     | extracted standard info from prmon json
[2026-04-21 10:40:21] 2026-04-21 14:39:45,691 | INFO     | extracted standard memory fields from prmon json
[2026-04-21 10:40:21] 2026-04-21 14:39:45,692 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-21 10:40:21] 2026-04-21 14:39:45,692 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-21 10:40:21] 2026-04-21 14:39:45,697 | INFO     | fitting pss+swap vs Time
[2026-04-21 10:40:21] 2026-04-21 14:39:45,698 | INFO     | sum of square deviations: 6240405339.75
[2026-04-21 10:40:21] 2026-04-21 14:39:45,700 | INFO     | sum of deviations: 23719122729.499958
[2026-04-21 10:40:21] 2026-04-21 14:39:45,700 | INFO     | mean x (centered): 0.0
[2026-04-21 10:40:21] 2026-04-21 14:39:45,700 | INFO     | mean y: 2622310.8088235296
[2026-04-21 10:40:21] 2026-04-21 14:39:45,701 | INFO     | intersect: 2622310.8088235296
[2026-04-21 10:40:21] 2026-04-21 14:39:45,701 | INFO     | chi2: 2.9297542830082683
[2026-04-21 10:40:21] 2026-04-21 14:39:45,701 | INFO     | sum of square deviations: 5902590388.794014
[2026-04-21 10:40:21] 2026-04-21 14:39:45,703 | INFO     | sum of deviations: 59947109291.94377
[2026-04-21 10:40:21] 2026-04-21 14:39:45,703 | INFO     | mean x (centered): 0.0
[2026-04-21 10:40:21] 2026-04-21 14:39:45,704 | INFO     | mean y: 2638475.9213483147
[2026-04-21 10:40:21] 2026-04-21 14:39:45,704 | INFO     | intersect: 2638475.9213483147
[2026-04-21 10:40:21] 2026-04-21 14:39:45,704 | INFO     | chi2: 1.4382565166443864
[2026-04-21 10:40:21] 2026-04-21 14:39:45,704 | INFO     | current chi2=1.4382565166443864 (change=50.90862994941725 %)
[2026-04-21 10:40:21] 2026-04-21 14:39:45,705 | INFO     | sum of square deviations: 5577194153.332083
[2026-04-21 10:40:21] 2026-04-21 14:39:45,707 | INFO     | sum of deviations: 58680323211.3244
[2026-04-21 10:40:21] 2026-04-21 14:39:45,707 | INFO     | mean x (centered): 0.0
[2026-04-21 10:40:21] 2026-04-21 14:39:45,707 | INFO     | mean y: 2637882.171755725
[2026-04-21 10:40:21] 2026-04-21 14:39:45,707 | INFO     | intersect: 2637882.171755725
[2026-04-21 10:40:21] 2026-04-21 14:39:45,708 | INFO     | chi2: 1.4382909136345448
[2026-04-21 10:40:21] 2026-04-21 14:39:45,708 | INFO     | current chi2=1.4382909136345448 (change=-0.0023915754776932174 %)
[2026-04-21 10:40:21] 2026-04-21 14:39:45,708 | INFO     | right removable region: 261
[2026-04-21 10:40:21] 2026-04-21 14:39:45,709 | INFO     | sum of square deviations: 5902544639.033727
[2026-04-21 10:40:21] 2026-04-21 14:39:45,711 | INFO     | sum of deviations: -22370625422.314606
[2026-04-21 10:40:21] 2026-04-21 14:39:45,711 | INFO     | mean x (centered): 0.0
[2026-04-21 10:40:21] 2026-04-21 14:39:45,711 | INFO     | mean y: 2642971.767790262
[2026-04-21 10:40:21] 2026-04-21 14:39:45,711 | INFO     | intersect: 2642971.767790262
[2026-04-21 10:40:21] 2026-04-21 14:39:45,712 | INFO     | chi2: 1.5442637237839283
[2026-04-21 10:40:21] 2026-04-21 14:39:45,712 | INFO     | current chi2=1.5442637237839283 (change=47.290333092429854 %)
[2026-04-21 10:40:21] 2026-04-21 14:39:45,712 | INFO     | sum of square deviations: 5577102775.79009
[2026-04-21 10:40:21] 2026-04-21 14:39:45,714 | INFO     | sum of deviations: -26367885933.011456
[2026-04-21 10:40:21] 2026-04-21 14:39:45,714 | INFO     | mean x (centered): 0.0
[2026-04-21 10:40:21] 2026-04-21 14:39:45,714 | INFO     | mean y: 2644821.103053435
[2026-04-21 10:40:21] 2026-04-21 14:39:45,714 | INFO     | intersect: 2644821.103053435
[2026-04-21 10:40:21] 2026-04-21 14:39:45,715 | INFO     | chi2: 1.5185853312397477
[2026-04-21 10:40:21] 2026-04-21 14:39:45,715 | INFO     | current chi2=1.5185853312397477 (change=1.6628243057643357 %)
[2026-04-21 10:40:21] 2026-04-21 14:39:45,715 | INFO     | left removable region: 10
[2026-04-21 10:40:21] 2026-04-21 14:39:45,716 | INFO     | sum of square deviations: 4903696188.541865
[2026-04-21 10:40:21] 2026-04-21 14:39:45,717 | INFO     | sum of deviations: 9088377838.410353
[2026-04-21 10:40:21] 2026-04-21 14:39:45,717 | INFO     | mean x (centered): 0.0
[2026-04-21 10:40:21] 2026-04-21 14:39:45,717 | INFO     | mean y: 2661872.920318725
[2026-04-21 10:40:21] 2026-04-21 14:39:45,718 | INFO     | intersect: 2661872.920318725
[2026-04-21 10:40:21] 2026-04-21 14:39:45,718 | INFO     | chi2: 0.0010317567657015811
[2026-04-21 10:40:21] 2026-04-21 14:39:45,718 | INFO     | current memory leak: 1.85 B/s (using 251 data points, chi2=0.00)
[2026-04-21 10:40:21] 2026-04-21 14:39:45,719 | INFO     | could have reported an average CPU frequency of 2886 MHz (13 samples)
[2026-04-21 10:40:21] 2026-04-21 14:39:45,719 | INFO     | ..............................
[2026-04-21 10:40:21] 2026-04-21 14:39:45,719 | INFO     | . Timing measurements:
[2026-04-21 10:40:21] 2026-04-21 14:39:45,719 | INFO     | . get job = 0 s
[2026-04-21 10:40:21] 2026-04-21 14:39:45,719 | INFO     | . initial setup = 6 s
[2026-04-21 10:40:21] 2026-04-21 14:39:45,719 | INFO     | . payload setup = 7 s
[2026-04-21 10:40:21] 2026-04-21 14:39:45,719 | INFO     | . stage-in = 0 s
[2026-04-21 10:40:21] 2026-04-21 14:39:45,719 | INFO     | . payload execution = 16590 s
[2026-04-21 10:40:21] 2026-04-21 14:39:45,719 | INFO     | . stage-out = 7 s
[2026-04-21 10:40:21] 2026-04-21 14:39:45,719 | INFO     | . log creation = 0 s
[2026-04-21 10:40:21] 2026-04-21 14:39:45,719 | INFO     | ..............................
[2026-04-21 10:40:21] 2026-04-21 14:39:46,224 | INFO     | 
[2026-04-21 10:40:21] 2026-04-21 14:39:46,224 | INFO     | job summary report
[2026-04-21 10:40:21] 2026-04-21 14:39:46,225 | INFO     | --------------------------------------------------
[2026-04-21 10:40:21] 2026-04-21 14:39:46,225 | INFO     | PanDA job id: 7104906060
[2026-04-21 10:40:21] 2026-04-21 14:39:46,225 | INFO     | task id: 49820244
[2026-04-21 10:40:21] 2026-04-21 14:39:46,225 | INFO     | errors: (none)
[2026-04-21 10:40:21] 2026-04-21 14:39:46,225 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-21 10:40:21] 2026-04-21 14:39:46,225 | INFO     | pilot state: finished 
[2026-04-21 10:40:21] 2026-04-21 14:39:46,225 | INFO     | transexitcode: 0
[2026-04-21 10:40:21] 2026-04-21 14:39:46,225 | INFO     | exeerrorcode: 0
[2026-04-21 10:40:21] 2026-04-21 14:39:46,225 | INFO     | exeerrordiag: 
[2026-04-21 10:40:21] 2026-04-21 14:39:46,225 | INFO     | exitcode: 0
[2026-04-21 10:40:21] 2026-04-21 14:39:46,225 | INFO     | exitmsg: OK
[2026-04-21 10:40:21] 2026-04-21 14:39:46,225 | INFO     | cpuconsumptiontime: 74378 s
[2026-04-21 10:40:21] 2026-04-21 14:39:46,226 | INFO     | nevents: 400
[2026-04-21 10:40:21] 2026-04-21 14:39:46,226 | INFO     | neventsw: 0
[2026-04-21 10:40:21] 2026-04-21 14:39:46,226 | INFO     | pid: 2778273
[2026-04-21 10:40:21] 2026-04-21 14:39:46,226 | INFO     | pgrp: 2778273
[2026-04-21 10:40:21] 2026-04-21 14:39:46,226 | INFO     | corecount: 10
[2026-04-21 10:40:21] 2026-04-21 14:39:46,226 | INFO     | event service: False
[2026-04-21 10:40:21] 2026-04-21 14:39:46,226 | INFO     | sizes: {0: 2281556, 1: 2283385, 11: 2283385, 16602: 2315383, 16603: 2315382, 16610: 2317458, 16614: 2317836}
[2026-04-21 10:40:21] 2026-04-21 14:39:46,226 | INFO     | --------------------------------------------------
[2026-04-21 10:40:21] 2026-04-21 14:39:46,226 | INFO     | 
[2026-04-21 10:40:21] 2026-04-21 14:39:46,226 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-04-21 10:40:21] 2026-04-21 14:39:46,327 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-21 10:40:21] 2026-04-21 14:39:46,333 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-21 10:40:21] 2026-04-21 14:39:46,333 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-21 10:40:21] 2026-04-21 14:39:46,334 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-21 10:40:21] 2026-04-21 14:39:46,334 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-21 10:40:21] 2026-04-21 14:39:46,334 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-21 10:40:21] 2026-04-21 14:39:46,334 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-21 10:40:21] 2026-04-21 14:39:46,334 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-21 10:40:21] 2026-04-21 14:39:46,334 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-21 10:40:21] 2026-04-21 14:39:46,334 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-21 10:40:21] 2026-04-21 14:39:46,334 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-21 10:40:21] 2026-04-21 14:39:46,334 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-21 10:40:21] 2026-04-21 14:39:46,334 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-21 10:40:21] 2026-04-21 14:39:46,334 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-21 10:40:21] 2026-04-21 14:39:46,334 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-21 10:40:21] 2026-04-21 14:39:46,335 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-21 10:40:21] 2026-04-21 14:39:46,335 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-21 10:40:21] 2026-04-21 14:39:46,335 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-21 10:40:21] 2026-04-21 14:39:46,335 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-21 10:40:21] 2026-04-21 14:39:46,335 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-21 10:40:21] 2026-04-21 14:39:46,335 | INFO     | job 7104906060 has completed (purged errors)
[2026-04-21 10:40:21] 2026-04-21 14:39:46,335 | INFO     | overall cleanup function is called
[2026-04-21 10:40:21] 2026-04-21 14:39:47,363 | INFO     | --- collectZombieJob: --- 10, [2778273]
[2026-04-21 10:40:21] 2026-04-21 14:39:47,363 | INFO     | zombie collector waiting for pid 2778273
[2026-04-21 10:40:21] 2026-04-21 14:39:47,364 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-21 10:40:21] 2026-04-21 14:39:47,364 | INFO     | collected zombie processes
[2026-04-21 10:40:21] 2026-04-21 14:39:47,364 | INFO     | will attempt to kill all subprocesses of pid=2778273
[2026-04-21 10:40:21] 2026-04-21 14:39:48,686 | INFO     | process IDs to be killed: [2778273] (in reverse order)
[2026-04-21 10:40:21] 2026-04-21 14:39:48,904 | WARNING  | found no corresponding commands to process id(s)
[2026-04-21 10:40:21] 2026-04-21 14:39:48,904 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-21 10:40:21] 2026-04-21 14:39:48,957 | INFO     | did not find any defunct processes belonging to 2778273
[2026-04-21 10:40:21] 2026-04-21 14:39:49,060 | INFO     | did not find any defunct processes belonging to 2778273
[2026-04-21 10:40:21] 2026-04-21 14:39:49,060 | INFO     | Ready for new job
[2026-04-21 10:40:21] 2026-04-21 14:39:49,079 | INFO     | **************************************
[2026-04-21 10:40:21] 2026-04-21 14:39:49,079 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-21 10:40:21] 2026-04-21 14:39:49,079 | INFO     | **************************************
[2026-04-21 10:40:21] 2026-04-21 14:39:49,079 | INFO     | 
[2026-04-21 10:40:21] 2026-04-21 14:39:49,099 | INFO     | architecture information:
[2026-04-21 10:40:21] 2026-04-21 14:39:49,116 | INFO     | executing command: cat /etc/os-release
[2026-04-21 10:40:21] 2026-04-21 14:39:49,182 | INFO     | cat /etc/os-release:
[2026-04-21 10:40:21] NAME="CentOS Linux"
[2026-04-21 10:40:21] VERSION="7 (Core)"
[2026-04-21 10:40:21] ID="centos"
[2026-04-21 10:40:21] ID_LIKE="rhel fedora"
[2026-04-21 10:40:21] VERSION_ID="7"
[2026-04-21 10:40:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-21 10:40:21] ANSI_COLOR="0;31"
[2026-04-21 10:40:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-21 10:40:21] HOME_URL="https://www.centos.org/"
[2026-04-21 10:40:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-21 10:40:21] 
[2026-04-21 10:40:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-21 10:40:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-21 10:40:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-21 10:40:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-21 10:40:21] 
[2026-04-21 10:40:21] 2026-04-21 14:39:49,182 | INFO     | **************************************
[2026-04-21 10:40:21] 2026-04-21 14:39:49,685 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-04-21 10:40:21] 2026-04-21 14:39:49,796 | INFO     | sufficient remaining disk space (57129566208 B)
[2026-04-21 10:40:21] 2026-04-21 14:39:49,796 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-21 10:40:21] 2026-04-21 14:39:49,796 | INFO     | current server update state: UPDATING_FINAL
[2026-04-21 10:40:21] 2026-04-21 14:39:49,796 | INFO     | update_server=False
[2026-04-21 10:40:21] 2026-04-21 14:39:49,796 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-21 10:40:21] 2026-04-21 14:39:50,161 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-21 10:40:21] 2026-04-21 14:39:50,239 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-21 10:40:21] 2026-04-21 14:39:50,239 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-21 10:40:21] 2026-04-21 14:39:50,240 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-21 10:40:21] 2026-04-21 14:39:50,240 | INFO     | will abort loop
[2026-04-21 10:40:21] 2026-04-21 14:39:50,376 | INFO     | all data control threads have been joined
[2026-04-21 10:40:21] 2026-04-21 14:39:50,441 | INFO     | all payload control threads have been joined
[2026-04-21 10:40:21] 2026-04-21 14:39:50,802 | INFO     | [job] retrieve thread has finished
[2026-04-21 10:40:21] 2026-04-21 14:39:50,868 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-21 10:40:21] 2026-04-21 14:39:51,245 | INFO     | [job] job monitor thread has finished
[2026-04-21 10:40:21] 2026-04-21 14:39:51,272 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-21 10:40:21] 2026-04-21 14:39:51,385 | INFO     | all job control threads have been joined
[2026-04-21 10:40:21] 2026-04-21 14:39:51,386 | INFO     | [data] control thread has finished
[2026-04-21 10:40:21] 2026-04-21 14:39:51,470 | INFO     | [payload] control thread has finished
[2026-04-21 10:40:21] 2026-04-21 14:39:51,595 | INFO     | [payload] failed_post thread has finished
[2026-04-21 10:40:21] 2026-04-21 14:39:51,653 | INFO     | [payload] validate_pre thread has finished
[2026-04-21 10:40:21] 2026-04-21 14:39:51,669 | INFO     | [job] create_data_payload thread has finished
[2026-04-21 10:40:21] 2026-04-21 14:39:51,675 | INFO     | [job] validate thread has finished
[2026-04-21 10:40:21] 2026-04-21 14:39:51,683 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-21 10:40:21] 2026-04-21 14:39:51,874 | INFO     | [job] queue monitor thread has finished
[2026-04-21 10:40:21] 2026-04-21 14:39:52,168 | INFO     | [data] copytool_out thread has finished
[2026-04-21 10:40:21] 2026-04-21 14:39:52,261 | INFO     | [data] copytool_in thread has finished
[2026-04-21 10:40:21] 2026-04-21 14:39:52,287 | INFO     | [payload] execute_payloads thread has finished
[2026-04-21 10:40:21] 2026-04-21 14:39:52,351 | INFO     | [payload] validate_post thread has finished
[2026-04-21 10:40:21] 2026-04-21 14:39:52,391 | INFO     | [job] control thread has finished
[2026-04-21 10:40:21] 2026-04-21 14:39:55,701 | INFO     | [data] queue_monitor thread has finished
[2026-04-21 10:40:21] 2026-04-21 14:40:10,465 | INFO     | [monitor] cgroup control has ended
[2026-04-21 10:40:21] 2026-04-21 14:40:12,568 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140135168640832)>', '<ExcThread(monitor, started 140134674573056)>']
[2026-04-21 10:40:21] 2026-04-21 14:40:17,609 | INFO     | all workflow threads have been joined
[2026-04-21 10:40:21] 2026-04-21 14:40:17,609 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-21 10:40:21] 2026-04-21 14:40:17,610 | INFO     | traces error code: 0
[2026-04-21 10:40:21] 2026-04-21 14:40:17,610 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-21 10:40:21] 2026-04-21 14:40:19,986 | INFO     | PID=2772405 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-21 10:40:21] 2026-04-21 14:40:19,986 | INFO     | .. there are 25 such processes running
[2026-04-21 10:40:21] 2026-04-21 14:40:19,987 | INFO     | found 0 job(s) in 20 queues
[2026-04-21 10:40:21] 2026-04-21 14:40:19,987 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-21 10:40:21] 2026-04-21 14:40:19,987 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-21 10:40:21] 2026-04-21 14:40:19,987 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-21 10:40:21] 2026-04-21 14:40:19,987 | INFO     | [monitor] control thread has ended
[2026-04-21 10:40:21] 2026-04-21 14:40:20,288 [wrapper] ==== pilot stdout END ====
[2026-04-21 10:40:21] 2026-04-21 14:40:20,293 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-21 10:40:21] 2026-04-21 14:40:20,310 [wrapper] pilotpid: 2772405
[2026-04-21 10:40:21] 2026-04-21 14:40:20,319 [wrapper] Pilot exit status: 0
[2026-04-21 10:40:21] 2026-04-21 14:40:20,405 [wrapper] pandaids: 7104906060
[2026-04-21 10:40:21] 2026-04-21 14:40:20,524 [wrapper] cleanup supervisor_pilot 3630671 2772406
[2026-04-21 10:40:21] 2026-04-21 14:40:20,536 [wrapper] Test setup, not cleaning
[2026-04-21 10:40:21] 2026-04-21 14:40:20,559 [wrapper] apfmon messages muted
[2026-04-21 10:40:21] 2026-04-21 14:40:20,580 [wrapper] ==== wrapper stdout END ====
[2026-04-21 10:40:21] 2026-04-21 14:40:20,628 [wrapper] ==== wrapper stderr END ====
[2026-04-21 10:40:21]  *** Error codes and diagnostics ***
[2026-04-21 10:40:21]     "exeErrorCode": 0,
[2026-04-21 10:40:21]     "pilotErrorCode": 0,
[2026-04-21 10:40:21]  *** Listing of results directory ***
[2026-04-21 10:40:21] total 2479788
[2026-04-21 10:40:21] -rwx------. 1 boincer umatlas      36322 Apr 21 03:47 runpilot2-wrapper.sh
[2026-04-21 10:40:21] -rw-r--r--. 1 boincer umatlas     644190 Apr 21 04:49 pilot3.tar.gz
[2026-04-21 10:40:21] -rw-r--r--. 1 boincer umatlas       5094 Apr 21 05:22 queuedata.json
[2026-04-21 10:40:21] -rw-r--r--. 1 boincer umatlas        100 Apr 21 06:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-21 10:40:21] -rwxr-xr-x. 1 boincer umatlas       7986 Apr 21 06:02 run_atlas
[2026-04-21 10:40:21] -rw-r--r--. 1 boincer umatlas        105 Apr 21 06:02 job.xml
[2026-04-21 10:40:21] -rw-r--r--. 2 boincer umatlas 2260623088 Apr 21 06:02 EVNT.49820242._000023.pool.root.1
[2026-04-21 10:40:21] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 06:02 start_atlas.sh
[2026-04-21 10:40:21] drwxrwx--x. 2 boincer umatlas       4096 Apr 21 06:02 shared
[2026-04-21 10:40:21] -rw-r--r--. 2 boincer umatlas     656925 Apr 21 06:02 input.tar.gz
[2026-04-21 10:40:21] -rw-r--r--. 1 boincer umatlas          0 Apr 21 06:02 boinc_lockfile
[2026-04-21 10:40:21] -rw-r--r--. 1 boincer umatlas       2551 Apr 21 06:02 pandaJob.out
[2026-04-21 10:40:21] -rw-------. 1 boincer umatlas         57 Apr 21 06:02 setup.sh.local
[2026-04-21 10:40:21] -rw-------. 1 boincer umatlas     995850 Apr 21 06:02 agis_schedconf.cvmfs.json
[2026-04-21 10:40:21] -rw-------. 1 boincer umatlas        442 Apr 21 06:02 workernode_map.json
[2026-04-21 10:40:21] drwx------. 5 boincer umatlas       4096 Apr 21 06:02 pilot3
[2026-04-21 10:40:21] -rw-------. 1 boincer umatlas  270867742 Apr 21 10:36 HITS.49820244._012563.pool.root.1
[2026-04-21 10:40:21] -rw-r--r--. 1 boincer umatlas        489 Apr 21 10:36 boinc_task_state.xml
[2026-04-21 10:40:21] -rw-------. 1 boincer umatlas         95 Apr 21 10:39 pilot_heartbeat.json
[2026-04-21 10:40:21] -rw-------. 1 boincer umatlas       1057 Apr 21 10:39 memory_monitor_summary.json
[2026-04-21 10:40:21] -rw-------. 1 boincer umatlas    1509089 Apr 21 10:39 agis_ddmendpoints.agis.ALL.json
[2026-04-21 10:40:21] -rw-------. 1 boincer umatlas     486073 Apr 21 10:39 log.49820244._012563.job.log.tgz.1
[2026-04-21 10:40:21] -rw-------. 1 boincer umatlas       6436 Apr 21 10:39 heartbeat_new.json
[2026-04-21 10:40:21] -rw-------. 1 boincer umatlas       6327 Apr 21 10:39 heartbeat.json
[2026-04-21 10:40:21] -rw-r--r--. 1 boincer umatlas       6792 Apr 21 10:40 init_data.xml
[2026-04-21 10:40:21] -rw-r--r--. 1 boincer umatlas         28 Apr 21 10:40 wrapper_checkpoint.txt
[2026-04-21 10:40:21] -rw-------. 1 boincer umatlas        823 Apr 21 10:40 pilotlog.txt
[2026-04-21 10:40:21] -rw-------. 1 boincer umatlas    1393865 Apr 21 10:40 log.49820244._012563.job.log.1
[2026-04-21 10:40:21] -rw-r--r--. 1 boincer umatlas       8192 Apr 21 10:40 boinc_mmap_file
[2026-04-21 10:40:21] -rw-------. 1 boincer umatlas        357 Apr 21 10:40 output.list
[2026-04-21 10:40:21] -rw-r--r--. 1 boincer umatlas        410 Apr 21 10:40 runtime_log
[2026-04-21 10:40:21] -rw-------. 1 boincer umatlas    1894400 Apr 21 10:40 result.tar.gz
[2026-04-21 10:40:21] -rw-r--r--. 1 boincer umatlas       8971 Apr 21 10:40 runtime_log.err
[2026-04-21 10:40:21] -rw-------. 1 boincer umatlas        662 Apr 21 10:40 2b673427c168.diag
[2026-04-21 10:40:21] -rw-r--r--. 1 boincer umatlas      21045 Apr 21 10:40 stderr.txt
[2026-04-21 10:40:21] HITS file was successfully produced:
[2026-04-21 10:40:21] -rw-------. 1 boincer umatlas 270867742 Apr 21 10:36 shared/HITS.pool.root.1
[2026-04-21 10:40:21]  *** Contents of shared directory: ***
[2026-04-21 10:40:21] total 2474680
[2026-04-21 10:40:21] -rw-r--r--. 2 boincer umatlas 2260623088 Apr 21 06:02 ATLAS.root_0
[2026-04-21 10:40:21] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 06:02 start_atlas.sh
[2026-04-21 10:40:21] -rw-r--r--. 2 boincer umatlas     656925 Apr 21 06:02 input.tar.gz
[2026-04-21 10:40:21] -rw-------. 1 boincer umatlas  270867742 Apr 21 10:36 HITS.pool.root.1
[2026-04-21 10:40:21] -rw-------. 1 boincer umatlas    1894400 Apr 21 10:40 result.tar.gz
10:40:22 (2768485): run_atlas exited; CPU time 75192.079348
10:40:22 (2768485): called boinc_finish(0)

</stderr_txt>
]]>

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