Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:02:14 (31113): wrapper (7.7.26015): starting
06:02:14 (31113): wrapper: running run_atlas (--nthreads 8)
[2026-04-21 06:02:14] Arguments: --nthreads 8
[2026-04-21 06:02:14] Threads: 8
[2026-04-21 06:02:14] Checking for CVMFS
[2026-04-21 06:02:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-21 06:02:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-21 06:02:14] Running cvmfs_config stat atlas.cern.ch
[2026-04-21 06:02:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-21 06:02:14] 2.11.2.0 4329 176436 270404 158685 1 1 10499809 18432000 1 130560 0 87250890 99.962 7658686 20345 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-21 06:02:14] CVMFS is ok
[2026-04-21 06:02:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 06:02:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 06:02:14] Further information can be found at the LHC@home message board.
[2026-04-21 06:02:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 06:02:14] Checking for apptainer binary...
[2026-04-21 06:02:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-21 06:02:14] Running /usr/bin/apptainer --version
[2026-04-21 06:02:14] apptainer version 1.3.2-1.el7
[2026-04-21 06:02:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 06:02:15] c-206-17.aglt2.org
[2026-04-21 06:02:15] apptainer works
[2026-04-21 06:02:15] Set ATHENA_PROC_NUMBER=8
[2026-04-21 06:02:15] Set ATHENA_CORE_NUMBER=8
[2026-04-21 06:02:15] Starting ATLAS job with PandaID=7105229432
[2026-04-21 06:02:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-21 11:16:20]  *** The last 200 lines of the pilot log: ***
[2026-04-21 11:16:20] 2026-04-21 15:15:20,430 | INFO     | chi2: 1.420908437965399
[2026-04-21 11:16:20] 2026-04-21 15:15:20,431 | INFO     | sum of square deviations: 8540720135.5
[2026-04-21 11:16:20] 2026-04-21 15:15:20,432 | INFO     | sum of deviations: 77967713609.5
[2026-04-21 11:16:20] 2026-04-21 15:15:20,433 | INFO     | mean x (centered): 0.0
[2026-04-21 11:16:20] 2026-04-21 15:15:20,433 | INFO     | mean y: 2544350.4205298014
[2026-04-21 11:16:20] 2026-04-21 15:15:20,433 | INFO     | intersect: 2544350.4205298014
[2026-04-21 11:16:20] 2026-04-21 15:15:20,433 | INFO     | chi2: 1.4209083814853867
[2026-04-21 11:16:20] 2026-04-21 15:15:20,433 | INFO     | current chi2=1.4209083814853867 (change=3.9749227123717095e-06 %)
[2026-04-21 11:16:20] 2026-04-21 15:15:20,433 | INFO     | right removable region: 301
[2026-04-21 11:16:20] 2026-04-21 15:15:20,434 | INFO     | sum of square deviations: 8540720135.5
[2026-04-21 11:16:20] 2026-04-21 15:15:20,436 | INFO     | sum of deviations: 31362456887.499996
[2026-04-21 11:16:20] 2026-04-21 15:15:20,436 | INFO     | mean x (centered): 0.0
[2026-04-21 11:16:20] 2026-04-21 15:15:20,436 | INFO     | mean y: 2562018.4933774834
[2026-04-21 11:16:20] 2026-04-21 15:15:20,436 | INFO     | intersect: 2562018.4933774834
[2026-04-21 11:16:20] 2026-04-21 15:15:20,436 | INFO     | chi2: 0.031839470854552444
[2026-04-21 11:16:20] 2026-04-21 15:15:20,437 | INFO     | current chi2=0.031839470854552444 (change=97.75921727228649 %)
[2026-04-21 11:16:20] 2026-04-21 15:15:20,437 | INFO     | sum of square deviations: 8123493708.0
[2026-04-21 11:16:20] 2026-04-21 15:15:20,439 | INFO     | sum of deviations: 23221986604.999996
[2026-04-21 11:16:20] 2026-04-21 15:15:20,439 | INFO     | mean x (centered): 0.0
[2026-04-21 11:16:20] 2026-04-21 15:15:20,439 | INFO     | mean y: 2564980.6565656564
[2026-04-21 11:16:20] 2026-04-21 15:15:20,439 | INFO     | intersect: 2564980.6565656564
[2026-04-21 11:16:20] 2026-04-21 15:15:20,439 | INFO     | chi2: 0.004127104135069947
[2026-04-21 11:16:20] 2026-04-21 15:15:20,440 | INFO     | current chi2=0.004127104135069947 (change=87.03777410773192 %)
[2026-04-21 11:16:20] 2026-04-21 15:15:20,440 | INFO     | sum of square deviations: 7720081493.0
[2026-04-21 11:16:20] 2026-04-21 15:15:20,442 | INFO     | sum of deviations: 19642916189.499996
[2026-04-21 11:16:20] 2026-04-21 15:15:20,442 | INFO     | mean x (centered): 0.0
[2026-04-21 11:16:20] 2026-04-21 15:15:20,442 | INFO     | mean y: 2566332.1883561644
[2026-04-21 11:16:20] 2026-04-21 15:15:20,442 | INFO     | intersect: 2566332.1883561644
[2026-04-21 11:16:20] 2026-04-21 15:15:20,442 | INFO     | chi2: 0.0016642218311151058
[2026-04-21 11:16:20] 2026-04-21 15:15:20,443 | INFO     | current chi2=0.0016642218311151058 (change=59.67579744418296 %)
[2026-04-21 11:16:20] 2026-04-21 15:15:20,443 | INFO     | sum of square deviations: 7330250928.0
[2026-04-21 11:16:20] 2026-04-21 15:15:20,445 | INFO     | sum of deviations: 16873956700.999998
[2026-04-21 11:16:20] 2026-04-21 15:15:20,445 | INFO     | mean x (centered): 0.0
[2026-04-21 11:16:20] 2026-04-21 15:15:20,445 | INFO     | mean y: 2567415.282229965
[2026-04-21 11:16:20] 2026-04-21 15:15:20,445 | INFO     | intersect: 2567415.282229965
[2026-04-21 11:16:20] 2026-04-21 15:15:20,445 | INFO     | chi2: 0.00034744115452277715
[2026-04-21 11:16:20] 2026-04-21 15:15:20,446 | INFO     | current chi2=0.00034744115452277715 (change=79.12290609179334 %)
[2026-04-21 11:16:20] 2026-04-21 15:15:20,446 | INFO     | sum of square deviations: 6953769450.5
[2026-04-21 11:16:20] 2026-04-21 15:15:20,448 | INFO     | sum of deviations: 15757232202.000002
[2026-04-21 11:16:20] 2026-04-21 15:15:20,448 | INFO     | mean x (centered): 0.0
[2026-04-21 11:16:20] 2026-04-21 15:15:20,448 | INFO     | mean y: 2567867.659574468
[2026-04-21 11:16:20] 2026-04-21 15:15:20,448 | INFO     | intersect: 2567867.659574468
[2026-04-21 11:16:20] 2026-04-21 15:15:20,448 | INFO     | chi2: 0.0003205673665144369
[2026-04-21 11:16:20] 2026-04-21 15:15:20,448 | INFO     | current chi2=0.0003205673665144369 (change=7.734773977841612 %)
[2026-04-21 11:16:20] 2026-04-21 15:15:20,448 | INFO     | left removable region: 25
[2026-04-21 11:16:20] 2026-04-21 15:15:20,449 | INFO     | sum of square deviations: 6519285025.0
[2026-04-21 11:16:20] 2026-04-21 15:15:20,450 | INFO     | sum of deviations: 14920818197.0
[2026-04-21 11:16:20] 2026-04-21 15:15:20,450 | INFO     | mean x (centered): 0.0
[2026-04-21 11:16:20] 2026-04-21 15:15:20,451 | INFO     | mean y: 2567515.4710144927
[2026-04-21 11:16:20] 2026-04-21 15:15:20,451 | INFO     | intersect: 2567515.4710144927
[2026-04-21 11:16:20] 2026-04-21 15:15:20,451 | INFO     | chi2: 0.000311787047339355
[2026-04-21 11:16:20] 2026-04-21 15:15:20,451 | INFO     | current memory leak: 2.29 B/s (using 276 data points, chi2=0.00)
[2026-04-21 11:16:20] 2026-04-21 15:15:20,452 | INFO     | could have reported an average CPU frequency of 1795 MHz (14 samples)
[2026-04-21 11:16:20] 2026-04-21 15:15:20,452 | INFO     | ..............................
[2026-04-21 11:16:20] 2026-04-21 15:15:20,452 | INFO     | . Timing measurements:
[2026-04-21 11:16:20] 2026-04-21 15:15:20,452 | INFO     | . get job = 0 s
[2026-04-21 11:16:20] 2026-04-21 15:15:20,452 | INFO     | . initial setup = 12 s
[2026-04-21 11:16:20] 2026-04-21 15:15:20,452 | INFO     | . payload setup = 12 s
[2026-04-21 11:16:20] 2026-04-21 15:15:20,452 | INFO     | . stage-in = 0 s
[2026-04-21 11:16:20] 2026-04-21 15:15:20,452 | INFO     | . payload execution = 18724 s
[2026-04-21 11:16:20] 2026-04-21 15:15:20,452 | INFO     | . stage-out = 2 s
[2026-04-21 11:16:20] 2026-04-21 15:15:20,453 | INFO     | . log creation = 0 s
[2026-04-21 11:16:20] 2026-04-21 15:15:20,453 | INFO     | ..............................
[2026-04-21 11:16:20] 2026-04-21 15:15:20,525 | INFO     | 
[2026-04-21 11:16:20] 2026-04-21 15:15:20,525 | INFO     | job summary report
[2026-04-21 11:16:20] 2026-04-21 15:15:20,525 | INFO     | --------------------------------------------------
[2026-04-21 11:16:20] 2026-04-21 15:15:20,525 | INFO     | PanDA job id: 7105229432
[2026-04-21 11:16:20] 2026-04-21 15:15:20,526 | INFO     | task id: 49820375
[2026-04-21 11:16:20] 2026-04-21 15:15:20,526 | INFO     | errors: (none)
[2026-04-21 11:16:20] 2026-04-21 15:15:20,526 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-21 11:16:20] 2026-04-21 15:15:20,526 | INFO     | pilot state: finished 
[2026-04-21 11:16:20] 2026-04-21 15:15:20,526 | INFO     | transexitcode: 0
[2026-04-21 11:16:20] 2026-04-21 15:15:20,526 | INFO     | exeerrorcode: 0
[2026-04-21 11:16:20] 2026-04-21 15:15:20,527 | INFO     | exeerrordiag: 
[2026-04-21 11:16:20] 2026-04-21 15:15:20,527 | INFO     | exitcode: 0
[2026-04-21 11:16:20] 2026-04-21 15:15:20,527 | INFO     | exitmsg: OK
[2026-04-21 11:16:20] 2026-04-21 15:15:20,527 | INFO     | cpuconsumptiontime: 144011 s
[2026-04-21 11:16:20] 2026-04-21 15:15:20,527 | INFO     | nevents: 400
[2026-04-21 11:16:20] 2026-04-21 15:15:20,527 | INFO     | neventsw: 0
[2026-04-21 11:16:20] 2026-04-21 15:15:20,527 | INFO     | pid: 15460
[2026-04-21 11:16:20] 2026-04-21 15:15:20,528 | INFO     | pgrp: 15460
[2026-04-21 11:16:20] 2026-04-21 15:15:20,528 | INFO     | corecount: 8
[2026-04-21 11:16:20] 2026-04-21 15:15:20,528 | INFO     | event service: False
[2026-04-21 11:16:20] 2026-04-21 15:15:20,528 | INFO     | sizes: {0: 2281762, 1: 2283392, 11: 2283420, 18741: 2315920, 18744: 2318134}
[2026-04-21 11:16:20] 2026-04-21 15:15:20,528 | INFO     | --------------------------------------------------
[2026-04-21 11:16:20] 2026-04-21 15:15:20,528 | INFO     | 
[2026-04-21 11:16:20] 2026-04-21 15:15:20,529 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-21 11:16:20] 2026-04-21 15:15:20,551 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-21 11:16:20] 2026-04-21 15:15:20,551 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-21 11:16:20] 2026-04-21 15:15:20,552 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-21 11:16:20] 2026-04-21 15:15:20,552 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-21 11:16:20] 2026-04-21 15:15:20,552 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-21 11:16:20] 2026-04-21 15:15:20,552 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-21 11:16:20] 2026-04-21 15:15:20,552 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-21 11:16:20] 2026-04-21 15:15:20,552 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-21 11:16:20] 2026-04-21 15:15:20,553 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-21 11:16:20] 2026-04-21 15:15:20,553 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-21 11:16:20] 2026-04-21 15:15:20,553 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-21 11:16:20] 2026-04-21 15:15:20,553 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-21 11:16:20] 2026-04-21 15:15:20,553 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-21 11:16:20] 2026-04-21 15:15:20,553 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-21 11:16:20] 2026-04-21 15:15:20,554 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-21 11:16:20] 2026-04-21 15:15:20,554 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-21 11:16:20] 2026-04-21 15:15:20,554 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-21 11:16:20] 2026-04-21 15:15:20,554 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-21 11:16:20] 2026-04-21 15:15:20,554 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-21 11:16:20] 2026-04-21 15:15:20,554 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-21 11:16:20] 2026-04-21 15:15:20,555 | INFO     | job 7105229432 has completed (purged errors)
[2026-04-21 11:16:20] 2026-04-21 15:15:20,555 | INFO     | overall cleanup function is called
[2026-04-21 11:16:20] 2026-04-21 15:15:21,563 | INFO     | --- collectZombieJob: --- 10, [15460]
[2026-04-21 11:16:20] 2026-04-21 15:15:21,563 | INFO     | zombie collector waiting for pid 15460
[2026-04-21 11:16:20] 2026-04-21 15:15:21,563 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-21 11:16:20] 2026-04-21 15:15:21,563 | INFO     | collected zombie processes
[2026-04-21 11:16:20] 2026-04-21 15:15:21,564 | INFO     | will attempt to kill all subprocesses of pid=15460
[2026-04-21 11:16:20] 2026-04-21 15:15:21,668 | INFO     | process IDs to be killed: [15460] (in reverse order)
[2026-04-21 11:16:20] 2026-04-21 15:15:21,719 | WARNING  | found no corresponding commands to process id(s)
[2026-04-21 11:16:20] 2026-04-21 15:15:21,719 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-21 11:16:20] 2026-04-21 15:15:21,723 | INFO     | did not find any defunct processes belonging to 15460
[2026-04-21 11:16:20] 2026-04-21 15:15:21,726 | INFO     | did not find any defunct processes belonging to 15460
[2026-04-21 11:16:20] 2026-04-21 15:15:21,727 | INFO     | Ready for new job
[2026-04-21 11:16:20] 2026-04-21 15:15:21,728 | INFO     | **************************************
[2026-04-21 11:16:20] 2026-04-21 15:15:21,728 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-21 11:16:20] 2026-04-21 15:15:21,728 | INFO     | **************************************
[2026-04-21 11:16:20] 2026-04-21 15:15:21,728 | INFO     | 
[2026-04-21 11:16:20] 2026-04-21 15:15:21,729 | INFO     | architecture information:
[2026-04-21 11:16:20] 2026-04-21 15:15:21,730 | INFO     | executing command: cat /etc/os-release
[2026-04-21 11:16:20] 2026-04-21 15:15:21,743 | INFO     | cat /etc/os-release:
[2026-04-21 11:16:20] NAME="CentOS Linux"
[2026-04-21 11:16:20] VERSION="7 (Core)"
[2026-04-21 11:16:20] ID="centos"
[2026-04-21 11:16:20] ID_LIKE="rhel fedora"
[2026-04-21 11:16:20] VERSION_ID="7"
[2026-04-21 11:16:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-21 11:16:20] ANSI_COLOR="0;31"
[2026-04-21 11:16:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-21 11:16:20] HOME_URL="https://www.centos.org/"
[2026-04-21 11:16:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-21 11:16:20] 
[2026-04-21 11:16:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-21 11:16:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-21 11:16:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-21 11:16:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-21 11:16:20] 
[2026-04-21 11:16:20] 2026-04-21 15:15:21,743 | INFO     | **************************************
[2026-04-21 11:16:20] 2026-04-21 15:15:22,246 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-21 11:16:20] 2026-04-21 15:15:22,261 | INFO     | sufficient remaining disk space (20335034368 B)
[2026-04-21 11:16:20] 2026-04-21 15:15:22,261 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-21 11:16:20] 2026-04-21 15:15:22,262 | INFO     | current server update state: UPDATING_FINAL
[2026-04-21 11:16:20] 2026-04-21 15:15:22,262 | INFO     | update_server=False
[2026-04-21 11:16:20] 2026-04-21 15:15:22,262 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-21 11:16:20] 2026-04-21 15:15:22,262 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-21 11:16:20] 2026-04-21 15:15:22,262 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-21 11:16:20] 2026-04-21 15:15:22,302 | INFO     | job.realtimelogging is not enabled
[2026-04-21 11:16:20] 2026-04-21 15:15:22,550 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-21 11:16:20] 2026-04-21 15:15:22,550 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-21 11:16:20] 2026-04-21 15:15:22,550 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-21 11:16:20] 2026-04-21 15:15:22,550 | INFO     | will abort loop
[2026-04-21 11:16:20] 2026-04-21 15:15:22,579 | INFO     | all data control threads have been joined
[2026-04-21 11:16:20] 2026-04-21 15:15:22,891 | INFO     | all payload control threads have been joined
[2026-04-21 11:16:20] 2026-04-21 15:15:22,974 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-21 11:16:20] 2026-04-21 15:15:23,267 | INFO     | [job] retrieve thread has finished
[2026-04-21 11:16:20] 2026-04-21 15:15:23,268 | INFO     | [job] queue monitor thread has finished
[2026-04-21 11:16:20] 2026-04-21 15:15:23,307 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-21 11:16:20] 2026-04-21 15:15:23,508 | INFO     | [data] copytool_in thread has finished
[2026-04-21 11:16:20] 2026-04-21 15:15:23,555 | INFO     | [job] job monitor thread has finished
[2026-04-21 11:16:20] 2026-04-21 15:15:23,584 | INFO     | [data] control thread has finished
[2026-04-21 11:16:20] 2026-04-21 15:15:23,634 | INFO     | all job control threads have been joined
[2026-04-21 11:16:20] 2026-04-21 15:15:23,777 | INFO     | [job] validate thread has finished
[2026-04-21 11:16:20] 2026-04-21 15:15:23,778 | INFO     | [payload] validate_pre thread has finished
[2026-04-21 11:16:20] 2026-04-21 15:15:23,815 | INFO     | [job] create_data_payload thread has finished
[2026-04-21 11:16:20] 2026-04-21 15:15:23,897 | INFO     | [payload] control thread has finished
[2026-04-21 11:16:20] 2026-04-21 15:15:23,989 | INFO     | [payload] execute_payloads thread has finished
[2026-04-21 11:16:20] 2026-04-21 15:15:24,190 | INFO     | [payload] failed_post thread has finished
[2026-04-21 11:16:20] 2026-04-21 15:15:24,640 | INFO     | [job] control thread has finished
[2026-04-21 11:16:20] 2026-04-21 15:15:24,804 | INFO     | [payload] validate_post thread has finished
[2026-04-21 11:16:20] 2026-04-21 15:15:24,980 | INFO     | [data] copytool_out thread has finished
[2026-04-21 11:16:20] 2026-04-21 15:15:26,264 | INFO     | [data] queue_monitor thread has finished
[2026-04-21 11:16:20] 2026-04-21 15:15:52,404 | INFO     | PID=4699 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-04-21 11:16:20] 2026-04-21 15:15:52,404 | INFO     | .. there are 2 such processes running
[2026-04-21 11:16:20] 2026-04-21 15:15:52,404 | INFO     | found 0 job(s) in 20 queues
[2026-04-21 11:16:20] 2026-04-21 15:15:52,404 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-21 11:16:20] 2026-04-21 15:15:52,404 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-21 11:16:20] 2026-04-21 15:16:15,124 | INFO     | [monitor] cgroup control has ended
[2026-04-21 11:16:20] 2026-04-21 15:16:15,621 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139762498520896)>', '<ExcThread(monitor, started 139761750615808)>']
[2026-04-21 11:16:20] 2026-04-21 15:16:16,523 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-21 11:16:20] 2026-04-21 15:16:16,523 | INFO     | [monitor] control thread has ended
[2026-04-21 11:16:20] 2026-04-21 15:16:20,643 | INFO     | all workflow threads have been joined
[2026-04-21 11:16:20] 2026-04-21 15:16:20,643 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-21 11:16:20] 2026-04-21 15:16:20,643 | INFO     | traces error code: 0
[2026-04-21 11:16:20] 2026-04-21 15:16:20,643 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-21 11:16:20] 2026-04-21 15:16:20,729 [wrapper] ==== pilot stdout END ====
[2026-04-21 11:16:20] 2026-04-21 15:16:20,732 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-21 11:16:20] 2026-04-21 15:16:20,735 [wrapper] pilotpid: 4699
[2026-04-21 11:16:20] 2026-04-21 15:16:20,738 [wrapper] Pilot exit status: 0
[2026-04-21 11:16:20] 2026-04-21 15:16:20,750 [wrapper] pandaids: 7105229432
[2026-04-21 11:16:20] 2026-04-21 15:16:20,784 [wrapper] cleanup supervisor_pilot 18601 4700
[2026-04-21 11:16:20] 2026-04-21 15:16:20,787 [wrapper] Test setup, not cleaning
[2026-04-21 11:16:20] 2026-04-21 15:16:20,791 [wrapper] apfmon messages muted
[2026-04-21 11:16:20] 2026-04-21 15:16:20,795 [wrapper] ==== wrapper stdout END ====
[2026-04-21 11:16:20] 2026-04-21 15:16:20,798 [wrapper] ==== wrapper stderr END ====
[2026-04-21 11:16:20]  *** Error codes and diagnostics ***
[2026-04-21 11:16:20]     "exeErrorCode": 0,
[2026-04-21 11:16:20]     "pilotErrorCode": 0,
[2026-04-21 11:16:20]  *** Listing of results directory ***
[2026-04-21 11:16:20] total 2439672
[2026-04-21 11:16:20] -rwx------ 1 boincer umatlas      36322 Apr 21 03:46 runpilot2-wrapper.sh
[2026-04-21 11:16:20] -rw-r--r-- 1 boincer umatlas     644190 Apr 21 04:49 pilot3.tar.gz
[2026-04-21 11:16:20] -rw-r--r-- 1 boincer umatlas       5094 Apr 21 05:22 queuedata.json
[2026-04-21 11:16:20] -rw-r--r-- 1 boincer umatlas        100 Apr 21 06:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-21 11:16:20] -rwxr-xr-x 1 boincer umatlas       7986 Apr 21 06:01 run_atlas
[2026-04-21 11:16:20] -rw-r--r-- 1 boincer umatlas        105 Apr 21 06:01 job.xml
[2026-04-21 11:16:20] -rw-r--r-- 2 boincer umatlas 2211879524 Apr 21 06:02 EVNT.49820373._000037.pool.root.1
[2026-04-21 11:16:20] -rw-r--r-- 2 boincer umatlas      15665 Apr 21 06:02 start_atlas.sh
[2026-04-21 11:16:20] drwxrwx--x 2 boincer umatlas       4096 Apr 21 06:02 shared
[2026-04-21 11:16:20] -rw-r--r-- 2 boincer umatlas     656936 Apr 21 06:02 input.tar.gz
[2026-04-21 11:16:20] -rw-r--r-- 1 boincer umatlas          0 Apr 21 06:02 boinc_lockfile
[2026-04-21 11:16:20] -rw-r--r-- 1 boincer umatlas       2586 Apr 21 06:02 pandaJob.out
[2026-04-21 11:16:20] -rw------- 1 boincer umatlas         57 Apr 21 06:02 setup.sh.local
[2026-04-21 11:16:20] -rw------- 1 boincer umatlas     995850 Apr 21 06:02 agis_schedconf.cvmfs.json
[2026-04-21 11:16:20] -rw------- 1 boincer umatlas        445 Apr 21 06:02 workernode_map.json
[2026-04-21 11:16:20] drwx------ 5 boincer umatlas       4096 Apr 21 06:02 pilot3
[2026-04-21 11:16:20] -rw-r--r-- 1 boincer umatlas       5867 Apr 21 11:09 init_data.xml
[2026-04-21 11:16:20] -rw------- 1 boincer umatlas  277766371 Apr 21 11:14 HITS.49820375._010389.pool.root.1
[2026-04-21 11:16:20] -rw------- 1 boincer umatlas         95 Apr 21 11:15 pilot_heartbeat.json
[2026-04-21 11:16:20] -rw-r--r-- 1 boincer umatlas        490 Apr 21 11:15 boinc_task_state.xml
[2026-04-21 11:16:20] -rw------- 1 boincer umatlas       1054 Apr 21 11:15 memory_monitor_summary.json
[2026-04-21 11:16:20] -rw------- 1 boincer umatlas    1509089 Apr 21 11:15 agis_ddmendpoints.agis.ALL.json
[2026-04-21 11:16:20] -rw------- 1 boincer umatlas     537630 Apr 21 11:15 log.49820375._010389.job.log.tgz.1
[2026-04-21 11:16:20] -rw------- 1 boincer umatlas       6451 Apr 21 11:15 heartbeat_new.json
[2026-04-21 11:16:20] -rw------- 1 boincer umatlas       6342 Apr 21 11:15 heartbeat.json
[2026-04-21 11:16:20] -rw-r--r-- 1 boincer umatlas         29 Apr 21 11:15 wrapper_checkpoint.txt
[2026-04-21 11:16:20] -rw-r--r-- 1 boincer umatlas       8192 Apr 21 11:15 boinc_mmap_file
[2026-04-21 11:16:20] -rw------- 1 boincer umatlas       5073 Apr 21 11:16 pilotlog.txt
[2026-04-21 11:16:20] -rw------- 1 boincer umatlas    1722628 Apr 21 11:16 log.49820375._010389.job.log.1
[2026-04-21 11:16:20] -rw------- 1 boincer umatlas        357 Apr 21 11:16 output.list
[2026-04-21 11:16:20] -rw-r--r-- 1 boincer umatlas        410 Apr 21 11:16 runtime_log
[2026-04-21 11:16:20] -rw------- 1 boincer umatlas    2273280 Apr 21 11:16 result.tar.gz
[2026-04-21 11:16:20] -rw-r--r-- 1 boincer umatlas       8964 Apr 21 11:16 runtime_log.err
[2026-04-21 11:16:20] -rw------- 1 boincer umatlas        663 Apr 21 11:16 2b66468277b4.diag
[2026-04-21 11:16:20] -rw-r--r-- 1 boincer umatlas      20807 Apr 21 11:16 stderr.txt
[2026-04-21 11:16:20] HITS file was successfully produced:
[2026-04-21 11:16:20] -rw------- 1 boincer umatlas 277766371 Apr 21 11:14 shared/HITS.pool.root.1
[2026-04-21 11:16:20]  *** Contents of shared directory: ***
[2026-04-21 11:16:20] total 2434188
[2026-04-21 11:16:20] -rw-r--r-- 2 boincer umatlas 2211879524 Apr 21 06:02 ATLAS.root_0
[2026-04-21 11:16:20] -rw-r--r-- 2 boincer umatlas      15665 Apr 21 06:02 start_atlas.sh
[2026-04-21 11:16:20] -rw-r--r-- 2 boincer umatlas     656936 Apr 21 06:02 input.tar.gz
[2026-04-21 11:16:20] -rw------- 1 boincer umatlas  277766371 Apr 21 11:14 HITS.pool.root.1
[2026-04-21 11:16:20] -rw------- 1 boincer umatlas    2273280 Apr 21 11:16 result.tar.gz
11:16:22 (31113): run_atlas exited; CPU time 144348.966097
11:16:22 (31113): called boinc_finish(0)

</stderr_txt>
]]>

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