Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:11:02 (11499): wrapper (7.7.26015): starting
12:11:02 (11499): wrapper: running run_atlas (--nthreads 8)
[2026-04-21 12:11:02] Arguments: --nthreads 8
[2026-04-21 12:11:02] Threads: 8
[2026-04-21 12:11:02] Checking for CVMFS
[2026-04-21 12:11:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-21 12:11:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-21 12:11:06] Running cvmfs_config stat atlas.cern.ch
[2026-04-21 12:11:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-21 12:11:08] 2.11.2.0 10636 8227 97268 158686 3 1 24531286 25165825 96 130560 0 2298582 99.748 4472570 18101 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-21 12:11:08] CVMFS is ok
[2026-04-21 12:11:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 12:11:08] Checking for apptainer binary...
[2026-04-21 12:11:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-21 12:11:08] Running /usr/bin/apptainer --version
[2026-04-21 12:11:08] apptainer version 1.3.2-1.el7
[2026-04-21 12:11:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 12:11:49] cg-vwn366.simple-grid.lan
[2026-04-21 12:11:49] apptainer works
[2026-04-21 12:11:49] Set ATHENA_PROC_NUMBER=8
[2026-04-21 12:11:49] Set ATHENA_CORE_NUMBER=8
[2026-04-21 12:11:49] Starting ATLAS job with PandaID=7105274372
[2026-04-21 12:11:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-21 19:20:47]  *** The last 200 lines of the pilot log: ***
[2026-04-21 19:20:47] 2026-04-21 17:19:50,667 | INFO     | this job has now completed (state=finished)
[2026-04-21 19:20:47] 2026-04-21 17:19:50,667 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-21 19:20:47] 2026-04-21 17:19:50,667 | INFO     | log transfer has been attempted: DONE
[2026-04-21 19:20:47] 2026-04-21 17:19:50,667 | INFO     | job 7105274372 has finished - writing final server update
[2026-04-21 19:20:47] 2026-04-21 17:19:50,668 | INFO     | total number of processed events: 400 (read)
[2026-04-21 19:20:47] 2026-04-21 17:19:50,669 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7105274372/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 19:20:47] 2026-04-21 17:19:50,670 | INFO     | extracted standard info from prmon json
[2026-04-21 19:20:47] 2026-04-21 17:19:50,670 | INFO     | extracted standard memory fields from prmon json
[2026-04-21 19:20:47] 2026-04-21 17:19:50,670 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-21 19:20:47] 2026-04-21 17:19:50,670 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-21 19:20:47] 2026-04-21 17:19:50,678 | INFO     | fitting pss+swap vs Time
[2026-04-21 19:20:47] 2026-04-21 17:19:50,679 | INFO     | sum of square deviations: 20751710017.5
[2026-04-21 19:20:47] 2026-04-21 17:19:50,683 | INFO     | sum of deviations: 222692139959.0001
[2026-04-21 19:20:47] 2026-04-21 17:19:50,684 | INFO     | mean x (centered): 0.0
[2026-04-21 19:20:47] 2026-04-21 17:19:50,684 | INFO     | mean y: 2493457.2463054187
[2026-04-21 19:20:47] 2026-04-21 17:19:50,684 | INFO     | intersect: 2493457.2463054187
[2026-04-21 19:20:47] 2026-04-21 17:19:50,684 | INFO     | chi2: 10.527326829284446
[2026-04-21 19:20:47] 2026-04-21 17:19:50,685 | INFO     | sum of square deviations: 19994421400.0
[2026-04-21 19:20:47] 2026-04-21 17:19:50,690 | INFO     | sum of deviations: 275536461492.0
[2026-04-21 19:20:47] 2026-04-21 17:19:50,690 | INFO     | mean x (centered): 0.0
[2026-04-21 19:20:47] 2026-04-21 17:19:50,690 | INFO     | mean y: 2504015.1371571072
[2026-04-21 19:20:47] 2026-04-21 17:19:50,690 | INFO     | intersect: 2504015.1371571072
[2026-04-21 19:20:47] 2026-04-21 17:19:50,691 | INFO     | chi2: 9.032764544428773
[2026-04-21 19:20:47] 2026-04-21 17:19:50,691 | INFO     | current chi2=9.032764544428773 (change=14.19697810367364 %)
[2026-04-21 19:20:47] 2026-04-21 17:19:50,691 | INFO     | right removable region: 400
[2026-04-21 19:20:47] 2026-04-21 17:19:50,691 | INFO     | sum of square deviations: 19994421400.0
[2026-04-21 19:20:47] 2026-04-21 17:19:50,696 | INFO     | sum of deviations: 73570185332.0002
[2026-04-21 19:20:47] 2026-04-21 17:19:50,696 | INFO     | mean x (centered): 0.0
[2026-04-21 19:20:47] 2026-04-21 17:19:50,696 | INFO     | mean y: 2523479.5037406483
[2026-04-21 19:20:47] 2026-04-21 17:19:50,697 | INFO     | intersect: 2523479.5037406483
[2026-04-21 19:20:47] 2026-04-21 17:19:50,697 | INFO     | chi2: 5.377068664486551
[2026-04-21 19:20:47] 2026-04-21 17:19:50,697 | INFO     | current chi2=5.377068664486551 (change=48.92275359468405 %)
[2026-04-21 19:20:47] 2026-04-21 17:19:50,698 | INFO     | sum of square deviations: 19255784295.0
[2026-04-21 19:20:47] 2026-04-21 17:19:50,703 | INFO     | sum of deviations: -45652045559.5
[2026-04-21 19:20:47] 2026-04-21 17:19:50,703 | INFO     | mean x (centered): 0.0
[2026-04-21 19:20:47] 2026-04-21 17:19:50,703 | INFO     | mean y: 2548079.744949495
[2026-04-21 19:20:47] 2026-04-21 17:19:50,703 | INFO     | intersect: 2548079.744949495
[2026-04-21 19:20:47] 2026-04-21 17:19:50,704 | INFO     | chi2: 2.261692769847913
[2026-04-21 19:20:47] 2026-04-21 17:19:50,704 | INFO     | current chi2=2.261692769847913 (change=57.938183218943905 %)
[2026-04-21 19:20:47] 2026-04-21 17:19:50,704 | INFO     | sum of square deviations: 18535566140.0
[2026-04-21 19:20:47] 2026-04-21 17:19:50,709 | INFO     | sum of deviations: -81819133775.00002
[2026-04-21 19:20:47] 2026-04-21 17:19:50,709 | INFO     | mean x (centered): 0.0
[2026-04-21 19:20:47] 2026-04-21 17:19:50,709 | INFO     | mean y: 2555697.8874680307
[2026-04-21 19:20:47] 2026-04-21 17:19:50,709 | INFO     | intersect: 2555697.8874680307
[2026-04-21 19:20:47] 2026-04-21 17:19:50,710 | INFO     | chi2: 1.7829417203154165
[2026-04-21 19:20:47] 2026-04-21 17:19:50,710 | INFO     | current chi2=1.7829417203154165 (change=21.167819781494458 %)
[2026-04-21 19:20:47] 2026-04-21 17:19:50,710 | INFO     | left removable region: 15
[2026-04-21 19:20:47] 2026-04-21 17:19:50,710 | INFO     | sum of square deviations: 17695289920.0
[2026-04-21 19:20:47] 2026-04-21 17:19:50,715 | INFO     | sum of deviations: -27195852528.0
[2026-04-21 19:20:47] 2026-04-21 17:19:50,715 | INFO     | mean x (centered): 0.0
[2026-04-21 19:20:47] 2026-04-21 17:19:50,715 | INFO     | mean y: 2567473.3064935063
[2026-04-21 19:20:47] 2026-04-21 17:19:50,715 | INFO     | intersect: 2567473.3064935063
[2026-04-21 19:20:47] 2026-04-21 17:19:50,716 | INFO     | chi2: 0.159546873249946
[2026-04-21 19:20:47] 2026-04-21 17:19:50,716 | INFO     | current memory leak: -1.54 B/s (using 385 data points, chi2=0.16)
[2026-04-21 19:20:47] 2026-04-21 17:19:50,716 | INFO     | could have reported an average CPU frequency of 1999 MHz (17 samples)
[2026-04-21 19:20:47] 2026-04-21 17:19:50,717 | INFO     | ..............................
[2026-04-21 19:20:47] 2026-04-21 17:19:50,717 | INFO     | . Timing measurements:
[2026-04-21 19:20:47] 2026-04-21 17:19:50,717 | INFO     | . get job = 1 s
[2026-04-21 19:20:47] 2026-04-21 17:19:50,717 | INFO     | . initial setup = 160 s
[2026-04-21 19:20:47] 2026-04-21 17:19:50,717 | INFO     | . payload setup = 195 s
[2026-04-21 19:20:47] 2026-04-21 17:19:50,717 | INFO     | . stage-in = 0 s
[2026-04-21 19:20:47] 2026-04-21 17:19:50,717 | INFO     | . payload execution = 24853 s
[2026-04-21 19:20:47] 2026-04-21 17:19:50,717 | INFO     | . stage-out = 3 s
[2026-04-21 19:20:47] 2026-04-21 17:19:50,717 | INFO     | . log creation = 1 s
[2026-04-21 19:20:47] 2026-04-21 17:19:50,717 | INFO     | ..............................
[2026-04-21 19:20:47] 2026-04-21 17:19:51,016 | INFO     | 
[2026-04-21 19:20:47] 2026-04-21 17:19:51,017 | INFO     | job summary report
[2026-04-21 19:20:47] 2026-04-21 17:19:51,017 | INFO     | --------------------------------------------------
[2026-04-21 19:20:47] 2026-04-21 17:19:51,017 | INFO     | PanDA job id: 7105274372
[2026-04-21 19:20:47] 2026-04-21 17:19:51,017 | INFO     | task id: 49820244
[2026-04-21 19:20:47] 2026-04-21 17:19:51,017 | INFO     | errors: (none)
[2026-04-21 19:20:47] 2026-04-21 17:19:51,017 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-21 19:20:47] 2026-04-21 17:19:51,017 | INFO     | pilot state: finished 
[2026-04-21 19:20:47] 2026-04-21 17:19:51,017 | INFO     | transexitcode: 0
[2026-04-21 19:20:47] 2026-04-21 17:19:51,017 | INFO     | exeerrorcode: 0
[2026-04-21 19:20:47] 2026-04-21 17:19:51,017 | INFO     | exeerrordiag: 
[2026-04-21 19:20:47] 2026-04-21 17:19:51,017 | INFO     | exitcode: 0
[2026-04-21 19:20:47] 2026-04-21 17:19:51,017 | INFO     | exitmsg: OK
[2026-04-21 19:20:47] 2026-04-21 17:19:51,018 | INFO     | cpuconsumptiontime: 95461 s
[2026-04-21 19:20:47] 2026-04-21 17:19:51,018 | INFO     | nevents: 400
[2026-04-21 19:20:47] 2026-04-21 17:19:51,018 | INFO     | neventsw: 0
[2026-04-21 19:20:47] 2026-04-21 17:19:51,018 | INFO     | pid: 19986
[2026-04-21 19:20:47] 2026-04-21 17:19:51,018 | INFO     | pgrp: 19986
[2026-04-21 19:20:47] 2026-04-21 17:19:51,018 | INFO     | corecount: 8
[2026-04-21 19:20:47] 2026-04-21 17:19:51,018 | INFO     | event service: False
[2026-04-21 19:20:47] 2026-04-21 17:19:51,018 | INFO     | sizes: {0: 2280897, 1: 2281582, 2: 2281837, 3: 2283411, 13: 2283439, 25053: 2318944, 25059: 2320964, 25060: 2321020, 25062: 2321278}
[2026-04-21 19:20:47] 2026-04-21 17:19:51,018 | INFO     | --------------------------------------------------
[2026-04-21 19:20:47] 2026-04-21 17:19:51,018 | INFO     | 
[2026-04-21 19:20:47] 2026-04-21 17:19:51,018 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-04-21 19:20:47] 2026-04-21 17:19:51,555 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-21 19:20:47] 2026-04-21 17:19:51,555 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-21 19:20:47] 2026-04-21 17:19:51,555 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-21 19:20:47] 2026-04-21 17:19:51,555 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-21 19:20:47] 2026-04-21 17:19:51,556 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-21 19:20:47] 2026-04-21 17:19:51,556 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-21 19:20:47] 2026-04-21 17:19:51,556 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-21 19:20:47] 2026-04-21 17:19:51,556 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-21 19:20:47] 2026-04-21 17:19:51,556 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-21 19:20:47] 2026-04-21 17:19:51,556 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-21 19:20:47] 2026-04-21 17:19:51,556 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-21 19:20:47] 2026-04-21 17:19:51,556 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-21 19:20:47] 2026-04-21 17:19:51,556 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-21 19:20:47] 2026-04-21 17:19:51,556 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-21 19:20:47] 2026-04-21 17:19:51,556 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-21 19:20:47] 2026-04-21 17:19:51,557 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-21 19:20:47] 2026-04-21 17:19:51,557 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-21 19:20:47] 2026-04-21 17:19:51,557 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-21 19:20:47] 2026-04-21 17:19:51,557 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-21 19:20:47] 2026-04-21 17:19:51,557 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-21 19:20:47] 2026-04-21 17:19:51,557 | INFO     | job 7105274372 has completed (purged errors)
[2026-04-21 19:20:47] 2026-04-21 17:19:51,557 | INFO     | overall cleanup function is called
[2026-04-21 19:20:47] 2026-04-21 17:19:52,565 | INFO     | --- collectZombieJob: --- 10, [19986]
[2026-04-21 19:20:47] 2026-04-21 17:19:52,566 | INFO     | zombie collector waiting for pid 19986
[2026-04-21 19:20:47] 2026-04-21 17:19:52,566 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-21 19:20:47] 2026-04-21 17:19:52,566 | INFO     | collected zombie processes
[2026-04-21 19:20:47] 2026-04-21 17:19:52,566 | INFO     | will attempt to kill all subprocesses of pid=19986
[2026-04-21 19:20:47] 2026-04-21 17:19:52,629 | INFO     | process IDs to be killed: [19986] (in reverse order)
[2026-04-21 19:20:47] 2026-04-21 17:19:53,520 | WARNING  | found no corresponding commands to process id(s)
[2026-04-21 19:20:47] 2026-04-21 17:19:53,520 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-21 19:20:47] 2026-04-21 17:19:53,522 | INFO     | did not find any defunct processes belonging to 19986
[2026-04-21 19:20:47] 2026-04-21 17:19:53,524 | INFO     | did not find any defunct processes belonging to 19986
[2026-04-21 19:20:47] 2026-04-21 17:19:53,524 | INFO     | Ready for new job
[2026-04-21 19:20:47] 2026-04-21 17:19:53,526 | INFO     | **************************************
[2026-04-21 19:20:47] 2026-04-21 17:19:53,526 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-21 19:20:47] 2026-04-21 17:19:53,526 | INFO     | **************************************
[2026-04-21 19:20:47] 2026-04-21 17:19:53,526 | INFO     | 
[2026-04-21 19:20:47] 2026-04-21 17:19:53,527 | INFO     | pilot is running in a VM
[2026-04-21 19:20:47] 2026-04-21 17:19:53,527 | INFO     | architecture information:
[2026-04-21 19:20:47] 2026-04-21 17:19:53,527 | INFO     | executing command: cat /etc/os-release
[2026-04-21 19:20:47] 2026-04-21 17:19:53,801 | INFO     | cat /etc/os-release:
[2026-04-21 19:20:47] NAME="CentOS Linux"
[2026-04-21 19:20:47] VERSION="7 (Core)"
[2026-04-21 19:20:47] ID="centos"
[2026-04-21 19:20:47] ID_LIKE="rhel fedora"
[2026-04-21 19:20:47] VERSION_ID="7"
[2026-04-21 19:20:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-21 19:20:47] ANSI_COLOR="0;31"
[2026-04-21 19:20:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-21 19:20:47] HOME_URL="https://www.centos.org/"
[2026-04-21 19:20:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-21 19:20:47] 
[2026-04-21 19:20:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-21 19:20:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-21 19:20:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-21 19:20:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-21 19:20:47] 
[2026-04-21 19:20:47] 2026-04-21 17:19:53,801 | INFO     | **************************************
[2026-04-21 19:20:47] 2026-04-21 17:19:54,305 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-04-21 19:20:47] 2026-04-21 17:19:54,551 | INFO     | sufficient remaining disk space (488466546688 B)
[2026-04-21 19:20:47] 2026-04-21 17:19:54,552 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-21 19:20:47] 2026-04-21 17:19:54,552 | INFO     | current server update state: UPDATING_FINAL
[2026-04-21 19:20:47] 2026-04-21 17:19:54,552 | INFO     | update_server=False
[2026-04-21 19:20:47] 2026-04-21 17:19:54,552 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-21 19:20:47] 2026-04-21 17:19:54,818 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-21 19:20:47] 2026-04-21 17:19:54,818 | INFO     | aborting loop
[2026-04-21 19:20:47] 2026-04-21 17:19:54,950 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-21 19:20:47] 2026-04-21 17:19:55,038 | INFO     | all job control threads have been joined
[2026-04-21 19:20:47] 2026-04-21 17:19:55,110 | INFO     | all data control threads have been joined
[2026-04-21 19:20:47] 2026-04-21 17:19:55,228 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-21 19:20:47] 2026-04-21 17:19:55,558 | INFO     | [job] retrieve thread has finished
[2026-04-21 19:20:47] 2026-04-21 17:19:55,659 | INFO     | [data] copytool_in thread has finished
[2026-04-21 19:20:47] 2026-04-21 17:19:55,824 | INFO     | [job] job monitor thread has finished
[2026-04-21 19:20:47] 2026-04-21 17:19:55,867 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-21 19:20:47] 2026-04-21 17:19:55,871 | INFO     | [payload] validate_post thread has finished
[2026-04-21 19:20:47] 2026-04-21 17:19:55,899 | INFO     | all payload control threads have been joined
[2026-04-21 19:20:47] 2026-04-21 17:19:56,045 | INFO     | [job] control thread has finished
[2026-04-21 19:20:47] 2026-04-21 17:19:56,120 | INFO     | [data] control thread has finished
[2026-04-21 19:20:47] 2026-04-21 17:19:56,278 | INFO     | [job] create_data_payload thread has finished
[2026-04-21 19:20:47] 2026-04-21 17:19:56,398 | INFO     | [payload] validate_pre thread has finished
[2026-04-21 19:20:47] 2026-04-21 17:19:56,412 | INFO     | [payload] execute_payloads thread has finished
[2026-04-21 19:20:47] 2026-04-21 17:19:56,541 | INFO     | [job] validate thread has finished
[2026-04-21 19:20:47] 2026-04-21 17:19:56,753 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-21 19:20:47] 2026-04-21 17:19:56,874 | INFO     | [job] queue monitor thread has finished
[2026-04-21 19:20:47] 2026-04-21 17:19:56,906 | INFO     | [payload] control thread has finished
[2026-04-21 19:20:47] 2026-04-21 17:19:56,960 | INFO     | [payload] failed_post thread has finished
[2026-04-21 19:20:47] 2026-04-21 17:19:57,236 | INFO     | [data] copytool_out thread has finished
[2026-04-21 19:20:47] 2026-04-21 17:19:58,960 | INFO     | [data] queue_monitor thread has finished
[2026-04-21 19:20:47] 2026-04-21 17:20:24,460 | INFO     | PID=15547 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-21 19:20:47] 2026-04-21 17:20:24,460 | INFO     | .. there are 2 such processes running
[2026-04-21 19:20:47] 2026-04-21 17:20:24,461 | INFO     | found 0 job(s) in 20 queues
[2026-04-21 19:20:47] 2026-04-21 17:20:24,461 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-21 19:20:47] 2026-04-21 17:20:24,461 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-21 19:20:47] 2026-04-21 17:20:37,545 | INFO     | [monitor] cgroup control has ended
[2026-04-21 19:20:47] 2026-04-21 17:20:39,179 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140101008951104)>', '<ExcThread(monitor, started 140100717487872)>']
[2026-04-21 19:20:47] 2026-04-21 17:20:39,550 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-21 19:20:47] 2026-04-21 17:20:39,551 | INFO     | [monitor] control thread has ended
[2026-04-21 19:20:47] 2026-04-21 17:20:44,203 | INFO     | all workflow threads have been joined
[2026-04-21 19:20:47] 2026-04-21 17:20:44,204 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-21 19:20:47] 2026-04-21 17:20:44,204 | INFO     | traces error code: 0
[2026-04-21 19:20:47] 2026-04-21 17:20:44,204 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-21 19:20:47] 2026-04-21 17:20:44,595 [wrapper] ==== pilot stdout END ====
[2026-04-21 19:20:47] 2026-04-21 17:20:44,702 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-21 19:20:47] 2026-04-21 17:20:44,831 [wrapper] pilotpid: 15547
[2026-04-21 19:20:47] 2026-04-21 17:20:44,881 [wrapper] Pilot exit status: 0
[2026-04-21 19:20:47] 2026-04-21 17:20:44,900 [wrapper] pandaids: 7105274372
[2026-04-21 19:20:47] 2026-04-21 17:20:44,950 [wrapper] cleanup supervisor_pilot 27611 15548
[2026-04-21 19:20:47] 2026-04-21 17:20:44,953 [wrapper] Test setup, not cleaning
[2026-04-21 19:20:47] 2026-04-21 17:20:44,956 [wrapper] apfmon messages muted
[2026-04-21 19:20:47] 2026-04-21 17:20:45,062 [wrapper] ==== wrapper stdout END ====
[2026-04-21 19:20:47] 2026-04-21 17:20:45,156 [wrapper] ==== wrapper stderr END ====
[2026-04-21 19:20:47]  *** Error codes and diagnostics ***
[2026-04-21 19:20:47]     "exeErrorCode": 0,
[2026-04-21 19:20:47]     "pilotErrorCode": 0,
[2026-04-21 19:20:47]  *** Listing of results directory ***
[2026-04-21 19:20:47] total 2442392
[2026-04-21 19:20:47] -rwx------. 1 boinc boinc      36322 Apr 21 09:46 runpilot2-wrapper.sh
[2026-04-21 19:20:47] -rw-r--r--. 1 boinc boinc     644190 Apr 21 10:49 pilot3.tar.gz
[2026-04-21 19:20:47] -rw-r--r--. 1 boinc boinc       5094 Apr 21 11:22 queuedata.json
[2026-04-21 19:20:47] -rw-r--r--. 1 boinc boinc        100 Apr 21 12:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-21 19:20:47] -rwxr-xr-x. 1 boinc boinc       7986 Apr 21 12:08 run_atlas
[2026-04-21 19:20:47] -rw-r--r--. 1 boinc boinc        105 Apr 21 12:08 job.xml
[2026-04-21 19:20:47] -rw-r--r--. 1 boinc boinc       6305 Apr 21 12:11 init_data.xml
[2026-04-21 19:20:47] -rw-r--r--. 2 boinc boinc 2217624906 Apr 21 12:11 EVNT.49820242._000027.pool.root.1
[2026-04-21 19:20:47] -rw-r--r--. 2 boinc boinc      15665 Apr 21 12:11 start_atlas.sh
[2026-04-21 19:20:47] drwxrwx--x. 2 boinc boinc         68 Apr 21 12:11 shared
[2026-04-21 19:20:47] -rw-r--r--. 2 boinc boinc     656923 Apr 21 12:11 input.tar.gz
[2026-04-21 19:20:47] -rw-r--r--. 1 boinc boinc          0 Apr 21 12:11 boinc_lockfile
[2026-04-21 19:20:47] -rw-r--r--. 1 boinc boinc       2550 Apr 21 12:11 pandaJob.out
[2026-04-21 19:20:47] -rw-------. 1 boinc boinc        415 Apr 21 12:21 workernode_map.json
[2026-04-21 19:20:47] -rw-------. 1 boinc boinc     995858 Apr 21 12:21 agis_schedconf.cvmfs.json
[2026-04-21 19:20:47] drwx------. 5 boinc boinc       4096 Apr 21 12:21 pilot3
[2026-04-21 19:20:47] -rw-------. 1 boinc boinc  273820449 Apr 21 19:18 HITS.49820244._013813.pool.root.1
[2026-04-21 19:20:47] -rw-r--r--. 1 boinc boinc        490 Apr 21 19:18 boinc_task_state.xml
[2026-04-21 19:20:47] -rw-------. 1 boinc boinc       1010 Apr 21 19:19 memory_monitor_summary.json
[2026-04-21 19:20:47] -rw-------. 1 boinc boinc    1509089 Apr 21 19:19 agis_ddmendpoints.agis.ALL.json
[2026-04-21 19:20:47] -rw-------. 1 boinc boinc     476504 Apr 21 19:19 log.49820244._013813.job.log.tgz.1
[2026-04-21 19:20:47] -rw-------. 1 boinc boinc       6334 Apr 21 19:19 heartbeat_new.json
[2026-04-21 19:20:47] -rw-------. 1 boinc boinc       6225 Apr 21 19:19 heartbeat.json
[2026-04-21 19:20:47] -rw-------. 1 boinc boinc         95 Apr 21 19:20 pilot_heartbeat.json
[2026-04-21 19:20:47] -rw-r--r--. 1 boinc boinc       8192 Apr 21 19:20 boinc_mmap_file
[2026-04-21 19:20:47] -rw-r--r--. 1 boinc boinc         28 Apr 21 19:20 wrapper_checkpoint.txt
[2026-04-21 19:20:47] -rw-------. 1 boinc boinc       4879 Apr 21 19:20 pilotlog.txt
[2026-04-21 19:20:47] -rw-------. 1 boinc boinc    2283801 Apr 21 19:20 log.49820244._013813.job.log.1
[2026-04-21 19:20:47] -rw-------. 1 boinc boinc        357 Apr 21 19:20 output.list
[2026-04-21 19:20:47] -rw-r--r--. 1 boinc boinc        410 Apr 21 19:20 runtime_log
[2026-04-21 19:20:47] -rw-------. 1 boinc boinc    2775040 Apr 21 19:20 result.tar.gz
[2026-04-21 19:20:47] -rw-r--r--. 1 boinc boinc       8438 Apr 21 19:20 runtime_log.err
[2026-04-21 19:20:47] -rw-------. 1 boinc boinc        656 Apr 21 19:20 2b5cfcaed474.diag
[2026-04-21 19:20:47] -rw-r--r--. 1 boinc boinc      20647 Apr 21 19:20 stderr.txt
[2026-04-21 19:20:48] HITS file was successfully produced:
[2026-04-21 19:20:48] -rw-------. 1 boinc boinc 273820449 Apr 21 19:18 shared/HITS.pool.root.1
[2026-04-21 19:20:48]  *** Contents of shared directory: ***
[2026-04-21 19:20:48] total 2436428
[2026-04-21 19:20:48] -rw-r--r--. 2 boinc boinc 2217624906 Apr 21 12:11 ATLAS.root_0
[2026-04-21 19:20:48] -rw-r--r--. 2 boinc boinc      15665 Apr 21 12:11 start_atlas.sh
[2026-04-21 19:20:48] -rw-r--r--. 2 boinc boinc     656923 Apr 21 12:11 input.tar.gz
[2026-04-21 19:20:48] -rw-------. 1 boinc boinc  273820449 Apr 21 19:18 HITS.pool.root.1
[2026-04-21 19:20:48] -rw-------. 1 boinc boinc    2775040 Apr 21 19:20 result.tar.gz
19:20:49 (11499): run_atlas exited; CPU time 95728.334327
19:20:49 (11499): called boinc_finish(0)

</stderr_txt>
]]>

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