Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:02:36 (4053528): wrapper (7.7.26015): starting
06:02:36 (4053528): wrapper: running run_atlas (--nthreads 9)
[2026-04-21 06:02:36] Arguments: --nthreads 9
[2026-04-21 06:02:36] Threads: 9
[2026-04-21 06:02:36] Checking for CVMFS
[2026-04-21 06:02:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-21 06:02:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-21 06:02:36] Running cvmfs_config stat atlas.cern.ch
[2026-04-21 06:02:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-21 06:02:36] 2.13.3.0 245921 126135 162324 158685 1 713 30122576 40960001 18892 16776704 0 317255746 99.796 168453182 39868 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-21 06:02:36] CVMFS is ok
[2026-04-21 06:02:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 06:02:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 06:02:36] Further information can be found at the LHC@home message board.
[2026-04-21 06:02:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 06:02:36] Checking for apptainer binary...
[2026-04-21 06:02:37] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-21 06:02:37] Running /usr/bin/apptainer --version
[2026-04-21 06:02:37] apptainer version 1.4.5-2.el9
[2026-04-21 06:02:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 06:02:37] c-212-12.aglt2.org
[2026-04-21 06:02:37] apptainer works
[2026-04-21 06:02:37] Set ATHENA_PROC_NUMBER=9
[2026-04-21 06:02:37] Set ATHENA_CORE_NUMBER=9
[2026-04-21 06:02:37] Starting ATLAS job with PandaID=7105250674
[2026-04-21 06:02:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-21 08:58:20]  *** The last 200 lines of the pilot log: ***
[2026-04-21 08:58:20] 2026-04-21 12:57:14,830 | INFO     | mean x (centered): 0.0
[2026-04-21 08:58:20] 2026-04-21 12:57:14,830 | INFO     | mean y: 2571481.1228070175
[2026-04-21 08:58:20] 2026-04-21 12:57:14,830 | INFO     | intersect: 2571481.1228070175
[2026-04-21 08:58:20] 2026-04-21 12:57:14,830 | INFO     | chi2: 1.3172485428645384
[2026-04-21 08:58:20] 2026-04-21 12:57:14,830 | INFO     | sum of square deviations: 1418356049.4939694
[2026-04-21 08:58:20] 2026-04-21 12:57:14,831 | INFO     | sum of deviations: 33548903723.61447
[2026-04-21 08:58:20] 2026-04-21 12:57:14,831 | INFO     | mean x (centered): 0.0
[2026-04-21 08:58:20] 2026-04-21 12:57:14,831 | INFO     | mean y: 2569606.8855421687
[2026-04-21 08:58:20] 2026-04-21 12:57:14,832 | INFO     | intersect: 2569606.8855421687
[2026-04-21 08:58:20] 2026-04-21 12:57:14,832 | INFO     | chi2: 1.3179392540843595
[2026-04-21 08:58:20] 2026-04-21 12:57:14,832 | INFO     | current chi2=1.3179392540843595 (change=-0.052435906918452124 %)
[2026-04-21 08:58:20] 2026-04-21 12:57:14,832 | INFO     | right removable region: 165
[2026-04-21 08:58:20] 2026-04-21 12:57:14,832 | INFO     | sum of square deviations: 1418355439.4939694
[2026-04-21 08:58:20] 2026-04-21 12:57:14,833 | INFO     | sum of deviations: 8940470511.77108
[2026-04-21 08:58:20] 2026-04-21 12:57:14,833 | INFO     | mean x (centered): 0.0
[2026-04-21 08:58:20] 2026-04-21 12:57:14,833 | INFO     | mean y: 2601412.2289156625
[2026-04-21 08:58:20] 2026-04-21 12:57:14,833 | INFO     | intersect: 2601412.2289156625
[2026-04-21 08:58:20] 2026-04-21 12:57:14,833 | INFO     | chi2: 0.01955227045126579
[2026-04-21 08:58:20] 2026-04-21 12:57:14,834 | INFO     | current chi2=0.01955227045126579 (change=98.51567340444753 %)
[2026-04-21 08:58:20] 2026-04-21 12:57:14,834 | INFO     | sum of square deviations: 1294008616.9937937
[2026-04-21 08:58:20] 2026-04-21 12:57:14,835 | INFO     | sum of deviations: 6676544226.155275
[2026-04-21 08:58:20] 2026-04-21 12:57:14,835 | INFO     | mean x (centered): 0.0
[2026-04-21 08:58:20] 2026-04-21 12:57:14,835 | INFO     | mean y: 2604136.844720497
[2026-04-21 08:58:20] 2026-04-21 12:57:14,835 | INFO     | intersect: 2604136.844720497
[2026-04-21 08:58:20] 2026-04-21 12:57:14,835 | INFO     | chi2: 0.0012828121607693255
[2026-04-21 08:58:20] 2026-04-21 12:57:14,835 | INFO     | current chi2=0.0012828121607693255 (change=93.43906292639134 %)
[2026-04-21 08:58:20] 2026-04-21 12:57:14,835 | INFO     | sum of square deviations: 1177150306.9935925
[2026-04-21 08:58:20] 2026-04-21 12:57:14,836 | INFO     | sum of deviations: 5636978398.865383
[2026-04-21 08:58:20] 2026-04-21 12:57:14,836 | INFO     | mean x (centered): 0.0
[2026-04-21 08:58:20] 2026-04-21 12:57:14,836 | INFO     | mean y: 2605493.6346153845
[2026-04-21 08:58:20] 2026-04-21 12:57:14,837 | INFO     | intersect: 2605493.6346153845
[2026-04-21 08:58:20] 2026-04-21 12:57:14,837 | INFO     | chi2: 0.0010081287128076853
[2026-04-21 08:58:20] 2026-04-21 12:57:14,837 | INFO     | current chi2=0.0010081287128076853 (change=21.412600875011005 %)
[2026-04-21 08:58:20] 2026-04-21 12:57:14,837 | INFO     | left removable region: 15
[2026-04-21 08:58:20] 2026-04-21 12:57:14,837 | INFO     | sum of square deviations: 1046478455.493336
[2026-04-21 08:58:20] 2026-04-21 12:57:14,838 | INFO     | sum of deviations: 4830791145.533335
[2026-04-21 08:58:20] 2026-04-21 12:57:14,838 | INFO     | mean x (centered): 0.0
[2026-04-21 08:58:20] 2026-04-21 12:57:14,838 | INFO     | mean y: 2604363.966666667
[2026-04-21 08:58:20] 2026-04-21 12:57:14,838 | INFO     | intersect: 2604363.966666667
[2026-04-21 08:58:20] 2026-04-21 12:57:14,838 | INFO     | chi2: 0.0009668628687963736
[2026-04-21 08:58:20] 2026-04-21 12:57:14,838 | INFO     | current memory leak: 4.62 B/s (using 150 data points, chi2=0.00)
[2026-04-21 08:58:20] 2026-04-21 12:57:14,839 | INFO     | could have reported an average CPU frequency of 3113 MHz (9 samples)
[2026-04-21 08:58:20] 2026-04-21 12:57:14,839 | INFO     | ..............................
[2026-04-21 08:58:20] 2026-04-21 12:57:14,839 | INFO     | . Timing measurements:
[2026-04-21 08:58:20] 2026-04-21 12:57:14,839 | INFO     | . get job = 0 s
[2026-04-21 08:58:20] 2026-04-21 12:57:14,839 | INFO     | . initial setup = 8 s
[2026-04-21 08:58:20] 2026-04-21 12:57:14,839 | INFO     | . payload setup = 11 s
[2026-04-21 08:58:20] 2026-04-21 12:57:14,839 | INFO     | . stage-in = 0 s
[2026-04-21 08:58:20] 2026-04-21 12:57:14,840 | INFO     | . payload execution = 10427 s
[2026-04-21 08:58:20] 2026-04-21 12:57:14,840 | INFO     | . stage-out = 0 s
[2026-04-21 08:58:20] 2026-04-21 12:57:14,840 | INFO     | . log creation = 0 s
[2026-04-21 08:58:20] 2026-04-21 12:57:14,840 | INFO     | ..............................
[2026-04-21 08:58:20] 2026-04-21 12:57:15,313 | INFO     | 
[2026-04-21 08:58:20] 2026-04-21 12:57:15,313 | INFO     | job summary report
[2026-04-21 08:58:20] 2026-04-21 12:57:15,313 | INFO     | --------------------------------------------------
[2026-04-21 08:58:20] 2026-04-21 12:57:15,313 | INFO     | PanDA job id: 7105250674
[2026-04-21 08:58:20] 2026-04-21 12:57:15,313 | INFO     | task id: 49820244
[2026-04-21 08:58:20] 2026-04-21 12:57:15,314 | INFO     | errors: (none)
[2026-04-21 08:58:20] 2026-04-21 12:57:15,314 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-21 08:58:20] 2026-04-21 12:57:15,314 | INFO     | pilot state: finished 
[2026-04-21 08:58:20] 2026-04-21 12:57:15,314 | INFO     | transexitcode: 0
[2026-04-21 08:58:20] 2026-04-21 12:57:15,314 | INFO     | exeerrorcode: 0
[2026-04-21 08:58:20] 2026-04-21 12:57:15,314 | INFO     | exeerrordiag: 
[2026-04-21 08:58:20] 2026-04-21 12:57:15,314 | INFO     | exitcode: 0
[2026-04-21 08:58:20] 2026-04-21 12:57:15,315 | INFO     | exitmsg: OK
[2026-04-21 08:58:20] 2026-04-21 12:57:15,315 | INFO     | cpuconsumptiontime: 57012 s
[2026-04-21 08:58:20] 2026-04-21 12:57:15,315 | INFO     | nevents: 400
[2026-04-21 08:58:20] 2026-04-21 12:57:15,315 | INFO     | neventsw: 0
[2026-04-21 08:58:20] 2026-04-21 12:57:15,315 | INFO     | pid: 4062062
[2026-04-21 08:58:20] 2026-04-21 12:57:15,315 | INFO     | pgrp: 4062062
[2026-04-21 08:58:20] 2026-04-21 12:57:15,315 | INFO     | corecount: 9
[2026-04-21 08:58:20] 2026-04-21 12:57:15,315 | INFO     | event service: False
[2026-04-21 08:58:20] 2026-04-21 12:57:15,315 | INFO     | sizes: {0: 2281556, 1: 2283385, 11: 2283385, 10442: 2312445, 10444: 2321443, 10447: 2321499, 10448: 2321885}
[2026-04-21 08:58:20] 2026-04-21 12:57:15,315 | INFO     | --------------------------------------------------
[2026-04-21 08:58:20] 2026-04-21 12:57:15,316 | INFO     | 
[2026-04-21 08:58:20] 2026-04-21 12:57:15,316 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-04-21 08:58:20] 2026-04-21 12:57:15,336 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-21 08:58:20] 2026-04-21 12:57:15,336 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-21 08:58:20] 2026-04-21 12:57:15,336 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-21 08:58:20] 2026-04-21 12:57:15,337 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-21 08:58:20] 2026-04-21 12:57:15,337 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-21 08:58:20] 2026-04-21 12:57:15,337 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-21 08:58:20] 2026-04-21 12:57:15,337 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-21 08:58:20] 2026-04-21 12:57:15,337 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-21 08:58:20] 2026-04-21 12:57:15,337 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-21 08:58:20] 2026-04-21 12:57:15,337 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-21 08:58:20] 2026-04-21 12:57:15,337 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-21 08:58:20] 2026-04-21 12:57:15,337 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-21 08:58:20] 2026-04-21 12:57:15,338 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-21 08:58:20] 2026-04-21 12:57:15,338 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-21 08:58:20] 2026-04-21 12:57:15,338 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-21 08:58:20] 2026-04-21 12:57:15,338 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-21 08:58:20] 2026-04-21 12:57:15,338 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-21 08:58:20] 2026-04-21 12:57:15,338 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-21 08:58:20] 2026-04-21 12:57:15,338 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-21 08:58:20] 2026-04-21 12:57:15,338 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-21 08:58:20] 2026-04-21 12:57:15,339 | INFO     | job 7105250674 has completed (purged errors)
[2026-04-21 08:58:20] 2026-04-21 12:57:15,339 | INFO     | overall cleanup function is called
[2026-04-21 08:58:20] 2026-04-21 12:57:15,585 | WARNING  | process 4062062 can no longer be monitored (due to stat problems) - aborting
[2026-04-21 08:58:20] 2026-04-21 12:57:15,798 | INFO     | using path: /tmp/boinchome/slots/3/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 08:58:20] 2026-04-21 12:57:15,798 | INFO     | using path: /tmp/boinchome/slots/3/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 08:58:20] 2026-04-21 12:57:15,799 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-04-21 08:58:20] 2026-04-21 12:57:15,799 | WARNING  | maxPSS not found in memory monitor output
[2026-04-21 08:58:20] 2026-04-21 12:57:15,799 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/3/PanDA_Pilot-7105250674/payload.stdout) since it has not been created yet
[2026-04-21 08:58:20] 2026-04-21 12:57:15,799 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-04-21 08:58:20] 2026-04-21 12:57:15,814 | INFO     | sufficient remaining disk space (107310219264 B)
[2026-04-21 08:58:20] 2026-04-21 12:57:15,814 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-04-21 08:58:20] 2026-04-21 12:57:15,814 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/3/PanDA_Pilot-7105250674/HITS.49820244._013795.pool.root.1 since it does not exist
[2026-04-21 08:58:20] 2026-04-21 12:57:16,179 | INFO     | number of running child processes to parent process 4062062: 1
[2026-04-21 08:58:20] 2026-04-21 12:57:16,179 | INFO     | maximum number of monitored processes: 6
[2026-04-21 08:58:20] 2026-04-21 12:57:16,179 | INFO     | aborting job monitoring since job object (job id=7105250674) has expired
[2026-04-21 08:58:20] 2026-04-21 12:57:16,348 | INFO     | --- collectZombieJob: --- 10, [4062062]
[2026-04-21 08:58:20] 2026-04-21 12:57:16,348 | INFO     | zombie collector waiting for pid 4062062
[2026-04-21 08:58:20] 2026-04-21 12:57:16,348 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-21 08:58:20] 2026-04-21 12:57:16,348 | INFO     | collected zombie processes
[2026-04-21 08:58:20] 2026-04-21 12:57:16,348 | INFO     | will attempt to kill all subprocesses of pid=4062062
[2026-04-21 08:58:20] 2026-04-21 12:57:16,703 | INFO     | process IDs to be killed: [4062062] (in reverse order)
[2026-04-21 08:58:20] 2026-04-21 12:57:16,824 | WARNING  | found no corresponding commands to process id(s)
[2026-04-21 08:58:20] 2026-04-21 12:57:16,825 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-21 08:58:20] 2026-04-21 12:57:16,840 | INFO     | did not find any defunct processes belonging to 4062062
[2026-04-21 08:58:20] 2026-04-21 12:57:16,855 | INFO     | did not find any defunct processes belonging to 4062062
[2026-04-21 08:58:20] 2026-04-21 12:57:16,856 | INFO     | Ready for new job
[2026-04-21 08:58:20] 2026-04-21 12:57:16,858 | INFO     | **************************************
[2026-04-21 08:58:20] 2026-04-21 12:57:16,858 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-21 08:58:20] 2026-04-21 12:57:16,858 | INFO     | **************************************
[2026-04-21 08:58:20] 2026-04-21 12:57:16,858 | INFO     | 
[2026-04-21 08:58:20] 2026-04-21 12:57:16,863 | INFO     | architecture information:
[2026-04-21 08:58:20] 2026-04-21 12:57:16,864 | INFO     | executing command: cat /etc/os-release
[2026-04-21 08:58:20] 2026-04-21 12:57:16,878 | INFO     | cat /etc/os-release:
[2026-04-21 08:58:20] NAME="CentOS Linux"
[2026-04-21 08:58:20] VERSION="7 (Core)"
[2026-04-21 08:58:20] ID="centos"
[2026-04-21 08:58:20] ID_LIKE="rhel fedora"
[2026-04-21 08:58:20] VERSION_ID="7"
[2026-04-21 08:58:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-21 08:58:20] ANSI_COLOR="0;31"
[2026-04-21 08:58:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-21 08:58:20] HOME_URL="https://www.centos.org/"
[2026-04-21 08:58:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-21 08:58:20] 
[2026-04-21 08:58:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-21 08:58:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-21 08:58:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-21 08:58:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-21 08:58:20] 
[2026-04-21 08:58:20] 2026-04-21 12:57:16,878 | INFO     | **************************************
[2026-04-21 08:58:20] 2026-04-21 12:57:17,381 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-04-21 08:58:20] 2026-04-21 12:57:17,394 | INFO     | sufficient remaining disk space (107311267840 B)
[2026-04-21 08:58:20] 2026-04-21 12:57:17,395 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-21 08:58:20] 2026-04-21 12:57:17,395 | INFO     | current server update state: UPDATING_FINAL
[2026-04-21 08:58:20] 2026-04-21 12:57:17,395 | INFO     | update_server=False
[2026-04-21 08:58:20] 2026-04-21 12:57:17,395 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-21 08:58:20] 2026-04-21 12:57:17,395 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-21 08:58:20] 2026-04-21 12:57:17,395 | INFO     | aborting loop
[2026-04-21 08:58:20] 2026-04-21 12:57:18,006 | INFO     | all data control threads have been joined
[2026-04-21 08:58:20] 2026-04-21 12:57:18,209 | INFO     | all payload control threads have been joined
[2026-04-21 08:58:20] 2026-04-21 12:57:18,400 | INFO     | [job] job monitor thread has finished
[2026-04-21 08:58:20] 2026-04-21 12:57:18,401 | INFO     | [job] retrieve thread has finished
[2026-04-21 08:58:20] 2026-04-21 12:57:18,516 | INFO     | all job control threads have been joined
[2026-04-21 08:58:20] 2026-04-21 12:57:18,639 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-21 08:58:20] 2026-04-21 12:57:18,793 | INFO     | [payload] execute_payloads thread has finished
[2026-04-21 08:58:20] 2026-04-21 12:57:18,808 | INFO     | [job] validate thread has finished
[2026-04-21 08:58:20] 2026-04-21 12:57:18,874 | INFO     | [payload] validate_pre thread has finished
[2026-04-21 08:58:20] 2026-04-21 12:57:19,012 | INFO     | [data] control thread has finished
[2026-04-21 08:58:20] 2026-04-21 12:57:19,214 | INFO     | [payload] control thread has finished
[2026-04-21 08:58:20] 2026-04-21 12:57:19,523 | INFO     | [job] control thread has finished
[2026-04-21 08:58:20] 2026-04-21 12:57:19,532 | INFO     | [data] copytool_in thread has finished
[2026-04-21 08:58:20] 2026-04-21 12:57:19,671 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-21 08:58:20] 2026-04-21 12:57:19,730 | INFO     | [job] create_data_payload thread has finished
[2026-04-21 08:58:20] 2026-04-21 12:57:19,845 | INFO     | [payload] failed_post thread has finished
[2026-04-21 08:58:20] 2026-04-21 12:57:19,848 | INFO     | [payload] validate_post thread has finished
[2026-04-21 08:58:20] 2026-04-21 12:57:19,928 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-21 08:58:20] 2026-04-21 12:57:20,640 | INFO     | [data] copytool_out thread has finished
[2026-04-21 08:58:20] 2026-04-21 12:57:20,933 | INFO     | [job] queue monitor thread has finished
[2026-04-21 08:58:20] 2026-04-21 12:57:23,680 | INFO     | [data] queue_monitor thread has finished
[2026-04-21 08:58:20] 2026-04-21 12:57:28,058 | INFO     | job.realtimelogging is not enabled
[2026-04-21 08:58:20] 2026-04-21 12:57:29,063 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-21 08:58:20] 2026-04-21 12:57:48,343 | INFO     | PID=4057204 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-21 08:58:20] 2026-04-21 12:57:48,343 | INFO     | .. there are 17 such processes running
[2026-04-21 08:58:20] 2026-04-21 12:57:48,344 | INFO     | found 0 job(s) in 20 queues
[2026-04-21 08:58:20] 2026-04-21 12:57:48,344 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-21 08:58:20] 2026-04-21 12:57:48,344 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-21 08:58:20] 2026-04-21 12:58:13,135 | INFO     | [monitor] cgroup control has ended
[2026-04-21 08:58:20] 2026-04-21 12:58:14,714 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140273071560512)>', '<ExcThread(monitor, started 140272625252096)>']
[2026-04-21 08:58:20] 2026-04-21 12:58:15,493 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-21 08:58:20] 2026-04-21 12:58:15,493 | INFO     | [monitor] control thread has ended
[2026-04-21 08:58:20] 2026-04-21 12:58:19,740 | INFO     | all workflow threads have been joined
[2026-04-21 08:58:20] 2026-04-21 12:58:19,740 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-21 08:58:20] 2026-04-21 12:58:19,740 | INFO     | traces error code: 0
[2026-04-21 08:58:20] 2026-04-21 12:58:19,741 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-21 08:58:20] 2026-04-21 12:58:19,895 [wrapper] ==== pilot stdout END ====
[2026-04-21 08:58:20] 2026-04-21 12:58:19,899 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-21 08:58:20] 2026-04-21 12:58:19,902 [wrapper] pilotpid: 4057204
[2026-04-21 08:58:20] 2026-04-21 12:58:19,907 [wrapper] Pilot exit status: 0
[2026-04-21 08:58:20] 2026-04-21 12:58:19,922 [wrapper] pandaids: 7105250674
[2026-04-21 08:58:20] 2026-04-21 12:58:20,022 [wrapper] cleanup supervisor_pilot  201390 4057205
[2026-04-21 08:58:20] 2026-04-21 12:58:20,025 [wrapper] Test setup, not cleaning
[2026-04-21 08:58:20] 2026-04-21 12:58:20,042 [wrapper] apfmon messages muted
[2026-04-21 08:58:20] 2026-04-21 12:58:20,059 [wrapper] ==== wrapper stdout END ====
[2026-04-21 08:58:20] 2026-04-21 12:58:20,065 [wrapper] ==== wrapper stderr END ====
[2026-04-21 08:58:20]  *** Error codes and diagnostics ***
[2026-04-21 08:58:20]     "exeErrorCode": 0,
[2026-04-21 08:58:20]     "pilotErrorCode": 0,
[2026-04-21 08:58:20]  *** Listing of results directory ***
[2026-04-21 08:58:20] total 2435744
[2026-04-21 08:58:20] -rwx------. 1 boincer umatlas      36322 Apr 21 03:46 runpilot2-wrapper.sh
[2026-04-21 08:58:20] -rw-r--r--. 1 boincer umatlas     644190 Apr 21 04:49 pilot3.tar.gz
[2026-04-21 08:58:20] -rw-r--r--. 1 boincer umatlas       5094 Apr 21 05:22 queuedata.json
[2026-04-21 08:58:20] -rw-r--r--. 1 boincer umatlas        100 Apr 21 06:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-21 08:58:20] -rwxr-xr-x. 1 boincer umatlas       7986 Apr 21 06:02 run_atlas
[2026-04-21 08:58:20] -rw-r--r--. 1 boincer umatlas        105 Apr 21 06:02 job.xml
[2026-04-21 08:58:20] -rw-r--r--. 2 boincer umatlas 2218882853 Apr 21 06:02 EVNT.49820242._000037.pool.root.1
[2026-04-21 08:58:20] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 06:02 start_atlas.sh
[2026-04-21 08:58:20] drwxrwx--x. 2 boincer umatlas       4096 Apr 21 06:02 shared
[2026-04-21 08:58:20] -rw-r--r--. 2 boincer umatlas     656925 Apr 21 06:02 input.tar.gz
[2026-04-21 08:58:20] -rw-r--r--. 1 boincer umatlas          0 Apr 21 06:02 boinc_lockfile
[2026-04-21 08:58:20] -rw-r--r--. 1 boincer umatlas       2551 Apr 21 06:02 pandaJob.out
[2026-04-21 08:58:20] -rw-------. 1 boincer umatlas         57 Apr 21 06:02 setup.sh.local
[2026-04-21 08:58:20] -rw-------. 1 boincer umatlas     995850 Apr 21 06:02 agis_schedconf.cvmfs.json
[2026-04-21 08:58:20] -rw-------. 1 boincer umatlas    1512404 Apr 21 06:02 agis_ddmendpoints.agis.ALL.json
[2026-04-21 08:58:20] -rw-------. 1 boincer umatlas        430 Apr 21 06:02 workernode_map.json
[2026-04-21 08:58:20] drwx------. 5 boincer umatlas       4096 Apr 21 06:02 pilot3
[2026-04-21 08:58:20] -rw-r--r--. 1 boincer umatlas       6874 Apr 21 08:55 init_data.xml
[2026-04-21 08:58:20] -rw-------. 1 boincer umatlas  268477160 Apr 21 08:56 HITS.49820244._013795.pool.root.1
[2026-04-21 08:58:20] -rw-r--r--. 1 boincer umatlas        488 Apr 21 08:56 boinc_task_state.xml
[2026-04-21 08:58:20] -rw-------. 1 boincer umatlas         95 Apr 21 08:56 pilot_heartbeat.json
[2026-04-21 08:58:20] -rw-------. 1 boincer umatlas       1046 Apr 21 08:57 memory_monitor_summary.json
[2026-04-21 08:58:20] -rw-------. 1 boincer umatlas     438310 Apr 21 08:57 log.49820244._013795.job.log.tgz.1
[2026-04-21 08:58:20] -rw-------. 1 boincer umatlas       6370 Apr 21 08:57 heartbeat_new.json
[2026-04-21 08:58:20] -rw-------. 1 boincer umatlas       6261 Apr 21 08:57 heartbeat.json
[2026-04-21 08:58:20] -rw-r--r--. 1 boincer umatlas       8192 Apr 21 08:58 boinc_mmap_file
[2026-04-21 08:58:20] -rw-r--r--. 1 boincer umatlas         27 Apr 21 08:58 wrapper_checkpoint.txt
[2026-04-21 08:58:20] -rw-------. 1 boincer umatlas       4892 Apr 21 08:58 pilotlog.txt
[2026-04-21 08:58:20] -rw-------. 1 boincer umatlas     947086 Apr 21 08:58 log.49820244._013795.job.log.1
[2026-04-21 08:58:20] -rw-------. 1 boincer umatlas        357 Apr 21 08:58 output.list
[2026-04-21 08:58:20] -rw-r--r--. 1 boincer umatlas        410 Apr 21 08:58 runtime_log
[2026-04-21 08:58:20] -rw-------. 1 boincer umatlas    1402880 Apr 21 08:58 result.tar.gz
[2026-04-21 08:58:20] -rw-------. 1 boincer umatlas        660 Apr 21 08:58 2b54c12b261c.diag
[2026-04-21 08:58:20] -rw-r--r--. 1 boincer umatlas       8964 Apr 21 08:58 runtime_log.err
[2026-04-21 08:58:20] -rw-r--r--. 1 boincer umatlas      21385 Apr 21 08:58 stderr.txt
[2026-04-21 08:58:20] HITS file was successfully produced:
[2026-04-21 08:58:20] -rw-------. 1 boincer umatlas 268477160 Apr 21 08:56 shared/HITS.pool.root.1
[2026-04-21 08:58:20]  *** Contents of shared directory: ***
[2026-04-21 08:58:20] total 2431108
[2026-04-21 08:58:20] -rw-r--r--. 2 boincer umatlas 2218882853 Apr 21 06:02 ATLAS.root_0
[2026-04-21 08:58:20] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 06:02 start_atlas.sh
[2026-04-21 08:58:20] -rw-r--r--. 2 boincer umatlas     656925 Apr 21 06:02 input.tar.gz
[2026-04-21 08:58:20] -rw-------. 1 boincer umatlas  268477160 Apr 21 08:56 HITS.pool.root.1
[2026-04-21 08:58:20] -rw-------. 1 boincer umatlas    1402880 Apr 21 08:58 result.tar.gz
08:58:22 (4053528): run_atlas exited; CPU time 57306.072897
08:58:22 (4053528): called boinc_finish(0)

</stderr_txt>
]]>

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