Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:34:59 (4128163): wrapper (7.7.26015): starting
12:34:59 (4128163): wrapper: running run_atlas (--nthreads 4)
[2026-04-21 12:34:59] Arguments: --nthreads 4
[2026-04-21 12:34:59] Threads: 4
[2026-04-21 12:34:59] Checking for CVMFS
[2026-04-21 12:34:59] No cvmfs_config command found, will try listing directly
[2026-04-21 12:34:59] CVMFS is ok
[2026-04-21 12:34:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 12:34:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 12:34:59] Further information can be found at the LHC@home message board.
[2026-04-21 12:34:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 12:34:59] Checking for apptainer binary...
[2026-04-21 12:34:59] which: no apptainer in ((null))
[2026-04-21 12:34:59] apptainer is not installed, using version from CVMFS
[2026-04-21 12:34:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 12:34:59] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot100/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2026-04-21 12:34:59] apptainer works
[2026-04-21 12:34:59] Set ATHENA_PROC_NUMBER=4
[2026-04-21 12:34:59] Set ATHENA_CORE_NUMBER=4
[2026-04-21 12:34:59] Starting ATLAS job with PandaID=7104804000
[2026-04-21 12:34:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot100/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-21 16:01:41]  *** The last 200 lines of the pilot log: ***
[2026-04-21 16:01:41] 2026-04-21 14:00:40,725 | INFO     | log transfer has been attempted: DONE
[2026-04-21 16:01:41] 2026-04-21 14:00:40,725 | INFO     | job 7104804000 has finished - writing final server update
[2026-04-21 16:01:41] 2026-04-21 14:00:40,726 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_9793/.job.ad'
[2026-04-21 16:01:41] 2026-04-21 14:00:40,726 | INFO     | total number of processed events: 400 (read)
[2026-04-21 16:01:41] 2026-04-21 14:00:40,749 | INFO     | using path: /var/lib/boinc/var/slot100/slots/1/PanDA_Pilot-7104804000/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 16:01:41] 2026-04-21 14:00:40,750 | INFO     | extracted standard info from prmon json
[2026-04-21 16:01:41] 2026-04-21 14:00:40,750 | INFO     | extracted standard memory fields from prmon json
[2026-04-21 16:01:41] 2026-04-21 14:00:40,750 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-21 16:01:41] 2026-04-21 14:00:40,750 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-21 16:01:41] 2026-04-21 14:00:40,754 | INFO     | fitting pss+swap vs Time
[2026-04-21 16:01:41] 2026-04-21 14:00:40,754 | INFO     | sum of square deviations: 2555770710.5
[2026-04-21 16:01:41] 2026-04-21 14:00:40,755 | INFO     | sum of deviations: 3537063283.999996
[2026-04-21 16:01:41] 2026-04-21 14:00:40,756 | INFO     | mean x (centered): 0.0
[2026-04-21 16:01:41] 2026-04-21 14:00:40,756 | INFO     | mean y: 2356028.4752475247
[2026-04-21 16:01:41] 2026-04-21 14:00:40,756 | INFO     | intersect: 2356028.4752475247
[2026-04-21 16:01:41] 2026-04-21 14:00:40,756 | INFO     | chi2: 2.014127923958854
[2026-04-21 16:01:41] 2026-04-21 14:00:40,756 | INFO     | sum of square deviations: 2370641658.0
[2026-04-21 16:01:41] 2026-04-21 14:00:40,758 | INFO     | sum of deviations: 16350112917.999996
[2026-04-21 16:01:41] 2026-04-21 14:00:40,758 | INFO     | mean x (centered): 0.0
[2026-04-21 16:01:41] 2026-04-21 14:00:40,758 | INFO     | mean y: 2366368.609137056
[2026-04-21 16:01:41] 2026-04-21 14:00:40,758 | INFO     | intersect: 2366368.609137056
[2026-04-21 16:01:41] 2026-04-21 14:00:40,758 | INFO     | chi2: 1.1995269711584742
[2026-04-21 16:01:41] 2026-04-21 14:00:40,758 | INFO     | current chi2=1.1995269711584742 (change=40.44435028730683 %)
[2026-04-21 16:01:41] 2026-04-21 14:00:40,759 | INFO     | sum of square deviations: 2194675568.0
[2026-04-21 16:01:41] 2026-04-21 14:00:40,760 | INFO     | sum of deviations: 15935507447.00001
[2026-04-21 16:01:41] 2026-04-21 14:00:40,760 | INFO     | mean x (centered): 0.0
[2026-04-21 16:01:41] 2026-04-21 14:00:40,760 | INFO     | mean y: 2366009.3333333335
[2026-04-21 16:01:41] 2026-04-21 14:00:40,760 | INFO     | intersect: 2366009.3333333335
[2026-04-21 16:01:41] 2026-04-21 14:00:40,760 | INFO     | chi2: 1.2002338094946787
[2026-04-21 16:01:41] 2026-04-21 14:00:40,760 | INFO     | current chi2=1.2002338094946787 (change=-0.0589264229316915 %)
[2026-04-21 16:01:41] 2026-04-21 14:00:40,760 | INFO     | right removable region: 191
[2026-04-21 16:01:41] 2026-04-21 14:00:40,761 | INFO     | sum of square deviations: 2370641658.0
[2026-04-21 16:01:41] 2026-04-21 14:00:40,762 | INFO     | sum of deviations: -19118207213.0
[2026-04-21 16:01:41] 2026-04-21 14:00:40,762 | INFO     | mean x (centered): 0.0
[2026-04-21 16:01:41] 2026-04-21 14:00:40,762 | INFO     | mean y: 2374419.3654822335
[2026-04-21 16:01:41] 2026-04-21 14:00:40,762 | INFO     | intersect: 2374419.3654822335
[2026-04-21 16:01:41] 2026-04-21 14:00:40,762 | INFO     | chi2: 0.8459433813488861
[2026-04-21 16:01:41] 2026-04-21 14:00:40,762 | INFO     | current chi2=0.8459433813488861 (change=57.99952072129816 %)
[2026-04-21 16:01:41] 2026-04-21 14:00:40,763 | INFO     | sum of square deviations: 2194675568.0
[2026-04-21 16:01:41] 2026-04-21 14:00:40,764 | INFO     | sum of deviations: -17927693850.5
[2026-04-21 16:01:41] 2026-04-21 14:00:40,764 | INFO     | mean x (centered): 0.0
[2026-04-21 16:01:41] 2026-04-21 14:00:40,764 | INFO     | mean y: 2373383.265625
[2026-04-21 16:01:41] 2026-04-21 14:00:40,764 | INFO     | intersect: 2373383.265625
[2026-04-21 16:01:41] 2026-04-21 14:00:40,764 | INFO     | chi2: 0.8460472025189987
[2026-04-21 16:01:41] 2026-04-21 14:00:40,764 | INFO     | current chi2=0.8460472025189987 (change=-0.012272827283900802 %)
[2026-04-21 16:01:41] 2026-04-21 14:00:40,765 | INFO     | left removable region: 10
[2026-04-21 16:01:41] 2026-04-21 14:00:40,765 | INFO     | sum of square deviations: 1838657730.0
[2026-04-21 16:01:41] 2026-04-21 14:00:40,766 | INFO     | sum of deviations: -5069476919.000001
[2026-04-21 16:01:41] 2026-04-21 14:00:40,766 | INFO     | mean x (centered): 0.0
[2026-04-21 16:01:41] 2026-04-21 14:00:40,766 | INFO     | mean y: 2384893.906077348
[2026-04-21 16:01:41] 2026-04-21 14:00:40,766 | INFO     | intersect: 2384893.906077348
[2026-04-21 16:01:41] 2026-04-21 14:00:40,766 | INFO     | chi2: 0.012086081840152028
[2026-04-21 16:01:41] 2026-04-21 14:00:40,766 | INFO     | current memory leak: -2.76 B/s (using 181 data points, chi2=0.01)
[2026-04-21 16:01:41] 2026-04-21 14:00:40,767 | INFO     | could have reported an average CPU frequency of 2781 MHz (10 samples)
[2026-04-21 16:01:41] 2026-04-21 14:00:40,767 | INFO     | ..............................
[2026-04-21 16:01:41] 2026-04-21 14:00:40,767 | INFO     | . Timing measurements:
[2026-04-21 16:01:41] 2026-04-21 14:00:40,767 | INFO     | . get job = 0 s
[2026-04-21 16:01:41] 2026-04-21 14:00:40,767 | INFO     | . initial setup = 7 s
[2026-04-21 16:01:41] 2026-04-21 14:00:40,767 | INFO     | . payload setup = 12 s
[2026-04-21 16:01:41] 2026-04-21 14:00:40,767 | INFO     | . stage-in = 0 s
[2026-04-21 16:01:41] 2026-04-21 14:00:40,767 | INFO     | . payload execution = 12291 s
[2026-04-21 16:01:41] 2026-04-21 14:00:40,768 | INFO     | . stage-out = 1 s
[2026-04-21 16:01:41] 2026-04-21 14:00:40,768 | INFO     | . log creation = 0 s
[2026-04-21 16:01:41] 2026-04-21 14:00:40,768 | INFO     | ..............................
[2026-04-21 16:01:41] 2026-04-21 14:00:40,853 | INFO     | 
[2026-04-21 16:01:41] 2026-04-21 14:00:40,854 | INFO     | job summary report
[2026-04-21 16:01:41] 2026-04-21 14:00:40,854 | INFO     | --------------------------------------------------
[2026-04-21 16:01:41] 2026-04-21 14:00:40,854 | INFO     | PanDA job id: 7104804000
[2026-04-21 16:01:41] 2026-04-21 14:00:40,854 | INFO     | task id: 49820244
[2026-04-21 16:01:41] 2026-04-21 14:00:40,854 | INFO     | errors: (none)
[2026-04-21 16:01:41] 2026-04-21 14:00:40,854 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-21 16:01:41] 2026-04-21 14:00:40,854 | INFO     | pilot state: finished 
[2026-04-21 16:01:41] 2026-04-21 14:00:40,854 | INFO     | transexitcode: 0
[2026-04-21 16:01:41] 2026-04-21 14:00:40,854 | INFO     | exeerrorcode: 0
[2026-04-21 16:01:41] 2026-04-21 14:00:40,854 | INFO     | exeerrordiag: 
[2026-04-21 16:01:41] 2026-04-21 14:00:40,854 | INFO     | exitcode: 0
[2026-04-21 16:01:41] 2026-04-21 14:00:40,855 | INFO     | exitmsg: OK
[2026-04-21 16:01:41] 2026-04-21 14:00:40,855 | INFO     | cpuconsumptiontime: 47469 s
[2026-04-21 16:01:41] 2026-04-21 14:00:40,855 | INFO     | nevents: 400
[2026-04-21 16:01:41] 2026-04-21 14:00:40,855 | INFO     | neventsw: 0
[2026-04-21 16:01:41] 2026-04-21 14:00:40,855 | INFO     | pid: 4138097
[2026-04-21 16:01:41] 2026-04-21 14:00:40,855 | INFO     | pgrp: 4138097
[2026-04-21 16:01:41] 2026-04-21 14:00:40,855 | INFO     | corecount: 4
[2026-04-21 16:01:41] 2026-04-21 14:00:40,855 | INFO     | event service: False
[2026-04-21 16:01:41] 2026-04-21 14:00:40,855 | INFO     | sizes: {0: 2283367, 11: 2283367, 12307: 2313565, 12308: 2313564, 12310: 2315664, 12312: 2316042}
[2026-04-21 16:01:41] 2026-04-21 14:00:40,855 | INFO     | --------------------------------------------------
[2026-04-21 16:01:41] 2026-04-21 14:00:40,855 | INFO     | 
[2026-04-21 16:01:41] 2026-04-21 14:00:40,855 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot100/slots/1
[2026-04-21 16:01:41] 2026-04-21 14:00:40,888 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-21 16:01:41] 2026-04-21 14:00:40,888 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-21 16:01:41] 2026-04-21 14:00:40,888 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-21 16:01:41] 2026-04-21 14:00:40,888 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-21 16:01:41] 2026-04-21 14:00:40,888 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-21 16:01:41] 2026-04-21 14:00:40,889 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-21 16:01:41] 2026-04-21 14:00:40,889 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-21 16:01:41] 2026-04-21 14:00:40,889 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-21 16:01:41] 2026-04-21 14:00:40,889 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-21 16:01:41] 2026-04-21 14:00:40,889 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-21 16:01:41] 2026-04-21 14:00:40,889 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-21 16:01:41] 2026-04-21 14:00:40,889 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-21 16:01:41] 2026-04-21 14:00:40,889 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-21 16:01:41] 2026-04-21 14:00:40,889 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-21 16:01:41] 2026-04-21 14:00:40,889 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-21 16:01:41] 2026-04-21 14:00:40,890 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-21 16:01:41] 2026-04-21 14:00:40,890 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-21 16:01:41] 2026-04-21 14:00:40,890 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-21 16:01:41] 2026-04-21 14:00:40,890 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-21 16:01:41] 2026-04-21 14:00:40,890 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-21 16:01:41] 2026-04-21 14:00:40,890 | INFO     | job 7104804000 has completed (purged errors)
[2026-04-21 16:01:41] 2026-04-21 14:00:40,890 | INFO     | overall cleanup function is called
[2026-04-21 16:01:41] 2026-04-21 14:00:41,899 | INFO     | --- collectZombieJob: --- 10, [4138097]
[2026-04-21 16:01:41] 2026-04-21 14:00:41,899 | INFO     | zombie collector waiting for pid 4138097
[2026-04-21 16:01:41] 2026-04-21 14:00:41,899 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-21 16:01:41] 2026-04-21 14:00:41,899 | INFO     | collected zombie processes
[2026-04-21 16:01:41] 2026-04-21 14:00:41,900 | INFO     | will attempt to kill all subprocesses of pid=4138097
[2026-04-21 16:01:41] 2026-04-21 14:00:42,583 | INFO     | process IDs to be killed: [4138097] (in reverse order)
[2026-04-21 16:01:41] 2026-04-21 14:00:42,829 | WARNING  | found no corresponding commands to process id(s)
[2026-04-21 16:01:41] 2026-04-21 14:00:42,829 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-21 16:01:41] 2026-04-21 14:00:42,856 | INFO     | did not find any defunct processes belonging to 4138097
[2026-04-21 16:01:41] 2026-04-21 14:00:42,881 | INFO     | did not find any defunct processes belonging to 4138097
[2026-04-21 16:01:41] 2026-04-21 14:00:42,881 | INFO     | Ready for new job
[2026-04-21 16:01:41] 2026-04-21 14:00:42,883 | INFO     | **************************************
[2026-04-21 16:01:41] 2026-04-21 14:00:42,883 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-21 16:01:41] 2026-04-21 14:00:42,884 | INFO     | **************************************
[2026-04-21 16:01:41] 2026-04-21 14:00:42,884 | INFO     | 
[2026-04-21 16:01:41] 2026-04-21 14:00:42,891 | INFO     | architecture information:
[2026-04-21 16:01:41] 2026-04-21 14:00:42,892 | INFO     | executing command: cat /etc/os-release
[2026-04-21 16:01:41] 2026-04-21 14:00:42,914 | INFO     | cat /etc/os-release:
[2026-04-21 16:01:41] NAME="CentOS Linux"
[2026-04-21 16:01:41] VERSION="7 (Core)"
[2026-04-21 16:01:41] ID="centos"
[2026-04-21 16:01:41] ID_LIKE="rhel fedora"
[2026-04-21 16:01:41] VERSION_ID="7"
[2026-04-21 16:01:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-21 16:01:41] ANSI_COLOR="0;31"
[2026-04-21 16:01:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-21 16:01:41] HOME_URL="https://www.centos.org/"
[2026-04-21 16:01:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-21 16:01:41] 
[2026-04-21 16:01:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-21 16:01:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-21 16:01:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-21 16:01:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-21 16:01:41] 
[2026-04-21 16:01:41] 2026-04-21 14:00:42,914 | INFO     | **************************************
[2026-04-21 16:01:41] 2026-04-21 14:00:43,417 | INFO     | executing command: df -mP /var/lib/boinc/var/slot100/slots/1
[2026-04-21 16:01:41] 2026-04-21 14:00:43,441 | INFO     | sufficient remaining disk space (160596754432 B)
[2026-04-21 16:01:41] 2026-04-21 14:00:43,442 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-21 16:01:41] 2026-04-21 14:00:43,442 | INFO     | current server update state: UPDATING_FINAL
[2026-04-21 16:01:41] 2026-04-21 14:00:43,442 | INFO     | update_server=False
[2026-04-21 16:01:41] 2026-04-21 14:00:43,442 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-21 16:01:41] 2026-04-21 14:00:43,593 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-21 16:01:41] 2026-04-21 14:00:43,594 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-21 16:01:41] 2026-04-21 14:00:43,594 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-21 16:01:41] 2026-04-21 14:00:43,594 | INFO     | will abort loop
[2026-04-21 16:01:41] 2026-04-21 14:00:44,059 | INFO     | all data control threads have been joined
[2026-04-21 16:01:41] 2026-04-21 14:00:44,185 | INFO     | all job control threads have been joined
[2026-04-21 16:01:41] 2026-04-21 14:00:44,203 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-21 16:01:41] 2026-04-21 14:00:44,447 | INFO     | [job] retrieve thread has finished
[2026-04-21 16:01:41] 2026-04-21 14:00:44,600 | INFO     | [job] job monitor thread has finished
[2026-04-21 16:01:41] 2026-04-21 14:00:44,682 | INFO     | [job] validate thread has finished
[2026-04-21 16:01:41] 2026-04-21 14:00:44,730 | INFO     | all payload control threads have been joined
[2026-04-21 16:01:41] 2026-04-21 14:00:44,827 | INFO     | [payload] execute_payloads thread has finished
[2026-04-21 16:01:41] 2026-04-21 14:00:44,972 | INFO     | [job] create_data_payload thread has finished
[2026-04-21 16:01:41] 2026-04-21 14:00:45,063 | INFO     | [payload] validate_pre thread has finished
[2026-04-21 16:01:41] 2026-04-21 14:00:45,064 | INFO     | [data] control thread has finished
[2026-04-21 16:01:41] 2026-04-21 14:00:45,104 | INFO     | [payload] failed_post thread has finished
[2026-04-21 16:01:41] 2026-04-21 14:00:45,191 | INFO     | [job] control thread has finished
[2026-04-21 16:01:41] 2026-04-21 14:00:45,554 | INFO     | [payload] validate_post thread has finished
[2026-04-21 16:01:41] 2026-04-21 14:00:45,566 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-21 16:01:41] 2026-04-21 14:00:45,695 | INFO     | [data] copytool_in thread has finished
[2026-04-21 16:01:41] 2026-04-21 14:00:45,736 | INFO     | [payload] control thread has finished
[2026-04-21 16:01:41] 2026-04-21 14:00:45,865 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-21 16:01:41] 2026-04-21 14:00:46,209 | INFO     | [data] copytool_out thread has finished
[2026-04-21 16:01:41] 2026-04-21 14:00:46,727 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-21 16:01:41] 2026-04-21 14:00:46,870 | INFO     | [job] queue monitor thread has finished
[2026-04-21 16:01:41] 2026-04-21 14:00:50,729 | INFO     | [data] queue_monitor thread has finished
[2026-04-21 16:01:41] 2026-04-21 14:01:14,133 | INFO     | PID=4132763 has CPU usage=9.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-21 16:01:41] 2026-04-21 14:01:14,133 | INFO     | .. there are 11 such processes running
[2026-04-21 16:01:41] 2026-04-21 14:01:14,133 | INFO     | found 0 job(s) in 20 queues
[2026-04-21 16:01:41] 2026-04-21 14:01:14,133 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-21 16:01:41] 2026-04-21 14:01:14,134 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-21 16:01:41] 2026-04-21 14:01:33,810 | INFO     | [monitor] cgroup control has ended
[2026-04-21 16:01:41] 2026-04-21 14:01:35,882 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23402941867840)>', '<ExcThread(monitor, started 23402701399808)>']
[2026-04-21 16:01:41] 2026-04-21 14:01:36,240 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-21 16:01:41] 2026-04-21 14:01:36,241 | INFO     | [monitor] control thread has ended
[2026-04-21 16:01:41] 2026-04-21 14:01:40,893 | INFO     | all workflow threads have been joined
[2026-04-21 16:01:41] 2026-04-21 14:01:40,894 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-21 16:01:41] 2026-04-21 14:01:40,894 | INFO     | traces error code: 0
[2026-04-21 16:01:41] 2026-04-21 14:01:40,894 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-21 16:01:41] 2026-04-21 14:01:41,059 [wrapper] ==== pilot stdout END ====
[2026-04-21 16:01:41] 2026-04-21 14:01:41,063 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-21 16:01:41] 2026-04-21 14:01:41,067 [wrapper] pilotpid: 4132763
[2026-04-21 16:01:41] 2026-04-21 14:01:41,072 [wrapper] Pilot exit status: 0
[2026-04-21 16:01:41] 2026-04-21 14:01:41,087 [wrapper] pandaids: 7104804000
[2026-04-21 16:01:41] 2026-04-21 14:01:41,260 [wrapper] cleanup supervisor_pilot  216199 4132764
[2026-04-21 16:01:41] 2026-04-21 14:01:41,264 [wrapper] Test setup, not cleaning
[2026-04-21 16:01:41] 2026-04-21 14:01:41,268 [wrapper] apfmon messages muted
[2026-04-21 16:01:41] 2026-04-21 14:01:41,272 [wrapper] ==== wrapper stdout END ====
[2026-04-21 16:01:41] 2026-04-21 14:01:41,276 [wrapper] ==== wrapper stderr END ====
[2026-04-21 16:01:41]  *** Error codes and diagnostics ***
[2026-04-21 16:01:41]     "exeErrorCode": 0,
[2026-04-21 16:01:41]     "pilotErrorCode": 0,
[2026-04-21 16:01:41]  *** Listing of results directory ***
[2026-04-21 16:01:41] total 2481148
[2026-04-21 16:01:41] -rwx------. 1 boinc boinc      36322 Apr 21 09:45 runpilot2-wrapper.sh
[2026-04-21 16:01:41] -rw-r--r--. 1 boinc boinc     644190 Apr 21 10:49 pilot3.tar.gz
[2026-04-21 16:01:41] -rw-r--r--. 1 boinc boinc       5094 Apr 21 11:22 queuedata.json
[2026-04-21 16:01:41] -rw-r--r--. 1 boinc boinc        100 Apr 21 11:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-21 16:01:41] -rwxr-xr-x. 1 boinc boinc       7986 Apr 21 11:54 run_atlas
[2026-04-21 16:01:41] -rw-r--r--. 1 boinc boinc        105 Apr 21 11:54 job.xml
[2026-04-21 16:01:41] -rw-r--r--. 1 boinc boinc       6540 Apr 21 12:34 init_data.xml
[2026-04-21 16:01:41] -rw-r--r--. 2 boinc boinc 2259978159 Apr 21 12:34 EVNT.49820242._000020.pool.root.1
[2026-04-21 16:01:41] -rw-r--r--. 2 boinc boinc      15665 Apr 21 12:34 start_atlas.sh
[2026-04-21 16:01:41] drwxrwx--x. 2 boinc boinc       4096 Apr 21 12:34 shared
[2026-04-21 16:01:41] -rw-r--r--. 2 boinc boinc     656923 Apr 21 12:34 input.tar.gz
[2026-04-21 16:01:41] -rw-r--r--. 1 boinc boinc          0 Apr 21 12:34 boinc_lockfile
[2026-04-21 16:01:41] -rw-r--r--. 1 boinc boinc       2550 Apr 21 12:34 pandaJob.out
[2026-04-21 16:01:41] -rw-------. 1 boinc boinc     995858 Apr 21 12:35 agis_schedconf.cvmfs.json
[2026-04-21 16:01:41] -rw-------. 1 boinc boinc        444 Apr 21 12:35 workernode_map.json
[2026-04-21 16:01:41] drwx------. 5 boinc boinc       4096 Apr 21 12:35 pilot3
[2026-04-21 16:01:41] -rw-------. 1 boinc boinc  273751205 Apr 21 16:00 HITS.49820244._012160.pool.root.1
[2026-04-21 16:01:41] -rw-r--r--. 1 boinc boinc        488 Apr 21 16:00 boinc_task_state.xml
[2026-04-21 16:01:41] -rw-------. 1 boinc boinc       1031 Apr 21 16:00 memory_monitor_summary.json
[2026-04-21 16:01:41] -rw-------. 1 boinc boinc         95 Apr 21 16:00 pilot_heartbeat.json
[2026-04-21 16:01:41] -rw-------. 1 boinc boinc    1509089 Apr 21 16:00 agis_ddmendpoints.agis.ALL.json
[2026-04-21 16:01:41] -rw-------. 1 boinc boinc     309011 Apr 21 16:00 log.49820244._012160.job.log.tgz.1
[2026-04-21 16:01:41] -rw-------. 1 boinc boinc       6374 Apr 21 16:00 heartbeat_new.json
[2026-04-21 16:01:41] -rw-------. 1 boinc boinc       6265 Apr 21 16:00 heartbeat.json
[2026-04-21 16:01:41] -rw-r--r--. 1 boinc boinc       8192 Apr 21 16:01 boinc_mmap_file
[2026-04-21 16:01:41] -rw-r--r--. 1 boinc boinc         27 Apr 21 16:01 wrapper_checkpoint.txt
[2026-04-21 16:01:41] -rw-------. 1 boinc boinc       5016 Apr 21 16:01 pilotlog.txt
[2026-04-21 16:01:41] -rw-------. 1 boinc boinc    1143883 Apr 21 16:01 log.49820244._012160.job.log.1
[2026-04-21 16:01:41] -rw-------. 1 boinc boinc        357 Apr 21 16:01 output.list
[2026-04-21 16:01:41] -rw-r--r--. 1 boinc boinc        410 Apr 21 16:01 runtime_log
[2026-04-21 16:01:41] -rw-------. 1 boinc boinc    1474560 Apr 21 16:01 result.tar.gz
[2026-04-21 16:01:41] -rw-------. 1 boinc boinc        664 Apr 21 16:01 2b15d0e722db.diag
[2026-04-21 16:01:41] -rw-r--r--. 1 boinc boinc       8844 Apr 21 16:01 runtime_log.err
[2026-04-21 16:01:41] -rw-r--r--. 1 boinc boinc      20812 Apr 21 16:01 stderr.txt
[2026-04-21 16:01:41] HITS file was successfully produced:
[2026-04-21 16:01:41] -rw-------. 1 boinc boinc 273751205 Apr 21 16:00 shared/HITS.pool.root.1
[2026-04-21 16:01:41]  *** Contents of shared directory: ***
[2026-04-21 16:01:41] total 2476456
[2026-04-21 16:01:41] -rw-r--r--. 2 boinc boinc 2259978159 Apr 21 12:34 ATLAS.root_0
[2026-04-21 16:01:41] -rw-r--r--. 2 boinc boinc      15665 Apr 21 12:34 start_atlas.sh
[2026-04-21 16:01:41] -rw-r--r--. 2 boinc boinc     656923 Apr 21 12:34 input.tar.gz
[2026-04-21 16:01:41] -rw-------. 1 boinc boinc  273751205 Apr 21 16:00 HITS.pool.root.1
[2026-04-21 16:01:41] -rw-------. 1 boinc boinc    1474560 Apr 21 16:01 result.tar.gz
16:01:43 (4128163): run_atlas exited; CPU time 48224.121725
16:01:43 (4128163): called boinc_finish(0)

</stderr_txt>
]]>

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