Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:01:37 (1686461): wrapper (7.7.26015): starting
03:01:37 (1686461): wrapper: running run_atlas (--nthreads 4)
[2026-04-23 03:01:37] Arguments: --nthreads 4
[2026-04-23 03:01:37] Threads: 4
[2026-04-23 03:01:37] Checking for CVMFS
[2026-04-23 03:01:37] No cvmfs_config command found, will try listing directly
[2026-04-23 03:01:37] CVMFS is ok
[2026-04-23 03:01:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-23 03:01:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-23 03:01:37] Further information can be found at the LHC@home message board.
[2026-04-23 03:01:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-23 03:01:37] Checking for apptainer binary...
[2026-04-23 03:01:37] which: no apptainer in ((null))
[2026-04-23 03:01:37] apptainer is not installed, using version from CVMFS
[2026-04-23 03:01:37] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-23 03:01:37] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot104/slots/12/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2026-04-23 03:01:37] apptainer works
[2026-04-23 03:01:37] Set ATHENA_PROC_NUMBER=4
[2026-04-23 03:01:37] Set ATHENA_CORE_NUMBER=4
[2026-04-23 03:01:37] Starting ATLAS job with PandaID=7105217183
[2026-04-23 03:01:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot104/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-23 07:47:16]  *** The last 200 lines of the pilot log: ***
[2026-04-23 07:47:16] 2026-04-23 05:43:32,226 | INFO     | log transfer has been attempted: DONE
[2026-04-23 07:47:16] 2026-04-23 05:43:32,226 | INFO     | job 7105217183 has finished - writing final server update
[2026-04-23 07:47:16] 2026-04-23 05:43:32,227 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_945215/.job.ad'
[2026-04-23 07:47:16] 2026-04-23 05:43:32,227 | INFO     | total number of processed events: 400 (read)
[2026-04-23 07:47:16] 2026-04-23 05:43:32,260 | INFO     | using path: /var/lib/boinc/var/slot104/slots/12/PanDA_Pilot-7105217183/memory_monitor_summary.json (trf name=prmon)
[2026-04-23 07:47:16] 2026-04-23 05:43:32,261 | INFO     | extracted standard info from prmon json
[2026-04-23 07:47:16] 2026-04-23 05:43:32,261 | INFO     | extracted standard memory fields from prmon json
[2026-04-23 07:47:16] 2026-04-23 05:43:32,262 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-23 07:47:16] 2026-04-23 05:43:32,262 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-23 07:47:16] 2026-04-23 05:43:32,268 | INFO     | fitting pss+swap vs Time
[2026-04-23 07:47:16] 2026-04-23 05:43:32,269 | INFO     | sum of square deviations: 6590404498.0
[2026-04-23 07:47:16] 2026-04-23 05:43:32,272 | INFO     | sum of deviations: 28625726383.0
[2026-04-23 07:47:16] 2026-04-23 05:43:32,272 | INFO     | mean x (centered): 0.0
[2026-04-23 07:47:16] 2026-04-23 05:43:32,272 | INFO     | mean y: 2352368.2815884477
[2026-04-23 07:47:16] 2026-04-23 05:43:32,273 | INFO     | intersect: 2352368.2815884477
[2026-04-23 07:47:16] 2026-04-23 05:43:32,273 | INFO     | chi2: 2.065451871980141
[2026-04-23 07:47:16] 2026-04-23 05:43:32,274 | INFO     | sum of square deviations: 6239923508.0
[2026-04-23 07:47:16] 2026-04-23 05:43:32,277 | INFO     | sum of deviations: 45191032142.50001
[2026-04-23 07:47:16] 2026-04-23 05:43:32,277 | INFO     | mean x (centered): 0.0
[2026-04-23 07:47:16] 2026-04-23 05:43:32,277 | INFO     | mean y: 2359466.025735294
[2026-04-23 07:47:16] 2026-04-23 05:43:32,277 | INFO     | intersect: 2359466.025735294
[2026-04-23 07:47:16] 2026-04-23 05:43:32,278 | INFO     | chi2: 1.3022328933654252
[2026-04-23 07:47:16] 2026-04-23 05:43:32,278 | INFO     | current chi2=1.3022328933654252 (change=36.951670913688275 %)
[2026-04-23 07:47:16] 2026-04-23 05:43:32,278 | INFO     | sum of square deviations: 5902093918.0
[2026-04-23 07:47:16] 2026-04-23 05:43:32,281 | INFO     | sum of deviations: 44211934593.0
[2026-04-23 07:47:16] 2026-04-23 05:43:32,282 | INFO     | mean x (centered): 0.0
[2026-04-23 07:47:16] 2026-04-23 05:43:32,282 | INFO     | mean y: 2359024.033707865
[2026-04-23 07:47:16] 2026-04-23 05:43:32,282 | INFO     | intersect: 2359024.033707865
[2026-04-23 07:47:16] 2026-04-23 05:43:32,282 | INFO     | chi2: 1.3024552341720306
[2026-04-23 07:47:16] 2026-04-23 05:43:32,282 | INFO     | current chi2=1.3024552341720306 (change=-0.01707381281321494 %)
[2026-04-23 07:47:16] 2026-04-23 05:43:32,283 | INFO     | right removable region: 266
[2026-04-23 07:47:16] 2026-04-23 05:43:32,283 | INFO     | sum of square deviations: 6239923508.0
[2026-04-23 07:47:16] 2026-04-23 05:43:32,286 | INFO     | sum of deviations: -6853441652.5
[2026-04-23 07:47:16] 2026-04-23 05:43:32,286 | INFO     | mean x (centered): 0.0
[2026-04-23 07:47:16] 2026-04-23 05:43:32,286 | INFO     | mean y: 2367661.2610294116
[2026-04-23 07:47:16] 2026-04-23 05:43:32,287 | INFO     | intersect: 2367661.2610294116
[2026-04-23 07:47:16] 2026-04-23 05:43:32,287 | INFO     | chi2: 0.7798436005302073
[2026-04-23 07:47:16] 2026-04-23 05:43:32,287 | INFO     | current chi2=0.7798436005302073 (change=62.24343877920649 %)
[2026-04-23 07:47:16] 2026-04-23 05:43:32,288 | INFO     | sum of square deviations: 5902093918.0
[2026-04-23 07:47:16] 2026-04-23 05:43:32,291 | INFO     | sum of deviations: -7094286031.0
[2026-04-23 07:47:16] 2026-04-23 05:43:32,291 | INFO     | mean x (centered): 0.0
[2026-04-23 07:47:16] 2026-04-23 05:43:32,291 | INFO     | mean y: 2367764.501872659
[2026-04-23 07:47:16] 2026-04-23 05:43:32,291 | INFO     | intersect: 2367764.501872659
[2026-04-23 07:47:16] 2026-04-23 05:43:32,292 | INFO     | chi2: 0.7784937793636674
[2026-04-23 07:47:16] 2026-04-23 05:43:32,292 | INFO     | current chi2=0.7784937793636674 (change=0.17308870209644509 %)
[2026-04-23 07:47:16] 2026-04-23 05:43:32,292 | INFO     | left removable region: 10
[2026-04-23 07:47:16] 2026-04-23 05:43:32,293 | INFO     | sum of square deviations: 5202255680.0
[2026-04-23 07:47:16] 2026-04-23 05:43:32,295 | INFO     | sum of deviations: 9144845317.0
[2026-04-23 07:47:16] 2026-04-23 05:43:32,296 | INFO     | mean x (centered): 0.0
[2026-04-23 07:47:16] 2026-04-23 05:43:32,296 | INFO     | mean y: 2375248.9765625
[2026-04-23 07:47:16] 2026-04-23 05:43:32,296 | INFO     | intersect: 2375248.9765625
[2026-04-23 07:47:16] 2026-04-23 05:43:32,296 | INFO     | chi2: 0.002060531387187403
[2026-04-23 07:47:16] 2026-04-23 05:43:32,297 | INFO     | current memory leak: 1.76 B/s (using 256 data points, chi2=0.00)
[2026-04-23 07:47:16] 2026-04-23 05:43:32,297 | INFO     | could have reported an average CPU frequency of 1995 MHz (13 samples)
[2026-04-23 07:47:16] 2026-04-23 05:43:32,297 | INFO     | ..............................
[2026-04-23 07:47:16] 2026-04-23 05:43:32,297 | INFO     | . Timing measurements:
[2026-04-23 07:47:16] 2026-04-23 05:43:32,297 | INFO     | . get job = 0 s
[2026-04-23 07:47:16] 2026-04-23 05:43:32,298 | INFO     | . initial setup = 7 s
[2026-04-23 07:47:16] 2026-04-23 05:43:32,298 | INFO     | . payload setup = 13 s
[2026-04-23 07:47:16] 2026-04-23 05:43:32,298 | INFO     | . stage-in = 0 s
[2026-04-23 07:47:16] 2026-04-23 05:43:32,298 | INFO     | . payload execution = 16862 s
[2026-04-23 07:47:16] 2026-04-23 05:43:32,298 | INFO     | . stage-out = 1 s
[2026-04-23 07:47:16] 2026-04-23 05:43:32,298 | INFO     | . log creation = 0 s
[2026-04-23 07:47:16] 2026-04-23 05:43:32,298 | INFO     | ..............................
[2026-04-23 07:47:16] 2026-04-23 05:43:32,424 | INFO     | 
[2026-04-23 07:47:16] 2026-04-23 05:43:32,424 | INFO     | job summary report
[2026-04-23 07:47:16] 2026-04-23 05:43:32,424 | INFO     | --------------------------------------------------
[2026-04-23 07:47:16] 2026-04-23 05:43:32,425 | INFO     | PanDA job id: 7105217183
[2026-04-23 07:47:16] 2026-04-23 05:43:32,425 | INFO     | task id: 49820375
[2026-04-23 07:47:16] 2026-04-23 05:43:32,425 | INFO     | errors: (none)
[2026-04-23 07:47:16] 2026-04-23 05:43:32,425 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-23 07:47:16] 2026-04-23 05:43:32,425 | INFO     | pilot state: finished 
[2026-04-23 07:47:16] 2026-04-23 05:43:32,425 | INFO     | transexitcode: 0
[2026-04-23 07:47:16] 2026-04-23 05:43:32,425 | INFO     | exeerrorcode: 0
[2026-04-23 07:47:16] 2026-04-23 05:43:32,425 | INFO     | exeerrordiag: 
[2026-04-23 07:47:16] 2026-04-23 05:43:32,426 | INFO     | exitcode: 0
[2026-04-23 07:47:16] 2026-04-23 05:43:32,426 | INFO     | exitmsg: OK
[2026-04-23 07:47:16] 2026-04-23 05:43:32,426 | INFO     | cpuconsumptiontime: 65266 s
[2026-04-23 07:47:16] 2026-04-23 05:43:32,426 | INFO     | nevents: 400
[2026-04-23 07:47:16] 2026-04-23 05:43:32,426 | INFO     | neventsw: 0
[2026-04-23 07:47:16] 2026-04-23 05:43:32,426 | INFO     | pid: 1695759
[2026-04-23 07:47:16] 2026-04-23 05:43:32,426 | INFO     | pgrp: 1695759
[2026-04-23 07:47:16] 2026-04-23 05:43:32,426 | INFO     | corecount: 4
[2026-04-23 07:47:16] 2026-04-23 05:43:32,426 | INFO     | event service: False
[2026-04-23 07:47:16] 2026-04-23 05:43:32,427 | INFO     | sizes: {0: 2274797, 1: 2276427, 11: 2276455, 16880: 2308930, 16882: 2317954, 16883: 2318332}
[2026-04-23 07:47:16] 2026-04-23 05:43:32,427 | INFO     | --------------------------------------------------
[2026-04-23 07:47:16] 2026-04-23 05:43:32,427 | INFO     | 
[2026-04-23 07:47:16] 2026-04-23 05:43:32,427 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot104/slots/12
[2026-04-23 07:47:16] 2026-04-23 05:43:32,458 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-23 07:47:16] 2026-04-23 05:43:32,459 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-23 07:47:16] 2026-04-23 05:43:32,459 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-23 07:47:16] 2026-04-23 05:43:32,459 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-23 07:47:16] 2026-04-23 05:43:32,459 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-23 07:47:16] 2026-04-23 05:43:32,459 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-23 07:47:16] 2026-04-23 05:43:32,459 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-23 07:47:16] 2026-04-23 05:43:32,460 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-23 07:47:16] 2026-04-23 05:43:32,460 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-23 07:47:16] 2026-04-23 05:43:32,460 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-23 07:47:16] 2026-04-23 05:43:32,460 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-23 07:47:16] 2026-04-23 05:43:32,460 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-23 07:47:16] 2026-04-23 05:43:32,460 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-23 07:47:16] 2026-04-23 05:43:32,460 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-23 07:47:16] 2026-04-23 05:43:32,460 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-23 07:47:16] 2026-04-23 05:43:32,460 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-23 07:47:16] 2026-04-23 05:43:32,461 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-23 07:47:16] 2026-04-23 05:43:32,461 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-23 07:47:16] 2026-04-23 05:43:32,461 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-23 07:47:16] 2026-04-23 05:43:32,461 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-23 07:47:16] 2026-04-23 05:43:32,461 | INFO     | job 7105217183 has completed (purged errors)
[2026-04-23 07:47:16] 2026-04-23 05:43:32,461 | INFO     | overall cleanup function is called
[2026-04-23 07:47:16] 2026-04-23 05:43:33,472 | INFO     | --- collectZombieJob: --- 10, [1695759]
[2026-04-23 07:47:16] 2026-04-23 05:43:33,473 | INFO     | zombie collector waiting for pid 1695759
[2026-04-23 07:47:16] 2026-04-23 05:43:33,473 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-23 07:47:16] 2026-04-23 05:43:33,473 | INFO     | collected zombie processes
[2026-04-23 07:47:16] 2026-04-23 05:43:33,473 | INFO     | will attempt to kill all subprocesses of pid=1695759
[2026-04-23 07:47:16] 2026-04-23 05:43:35,103 | INFO     | PID=1690532 has CPU usage=34.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-23 07:47:16] 2026-04-23 05:43:35,103 | INFO     | .. there are 7 such processes running
[2026-04-23 07:47:16] 2026-04-23 05:43:35,130 | INFO     | process IDs to be killed: [1695759] (in reverse order)
[2026-04-23 07:47:16] 2026-04-23 05:43:35,362 | WARNING  | found no corresponding commands to process id(s)
[2026-04-23 07:47:16] 2026-04-23 05:43:35,363 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-23 07:47:16] 2026-04-23 05:43:35,389 | INFO     | did not find any defunct processes belonging to 1695759
[2026-04-23 07:47:16] 2026-04-23 05:43:35,411 | INFO     | did not find any defunct processes belonging to 1695759
[2026-04-23 07:47:16] 2026-04-23 05:43:35,411 | INFO     | Ready for new job
[2026-04-23 07:47:16] 2026-04-23 05:43:35,413 | INFO     | **************************************
[2026-04-23 07:47:16] 2026-04-23 05:43:35,414 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-23 07:47:16] 2026-04-23 05:43:35,414 | INFO     | **************************************
[2026-04-23 07:47:16] 2026-04-23 05:43:35,414 | INFO     | 
[2026-04-23 07:47:16] 2026-04-23 05:43:35,422 | INFO     | architecture information:
[2026-04-23 07:47:16] 2026-04-23 05:43:35,422 | INFO     | executing command: cat /etc/os-release
[2026-04-23 07:47:16] 2026-04-23 05:43:35,441 | INFO     | cat /etc/os-release:
[2026-04-23 07:47:16] NAME="CentOS Linux"
[2026-04-23 07:47:16] VERSION="7 (Core)"
[2026-04-23 07:47:16] ID="centos"
[2026-04-23 07:47:16] ID_LIKE="rhel fedora"
[2026-04-23 07:47:16] VERSION_ID="7"
[2026-04-23 07:47:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-23 07:47:16] ANSI_COLOR="0;31"
[2026-04-23 07:47:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-23 07:47:16] HOME_URL="https://www.centos.org/"
[2026-04-23 07:47:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-23 07:47:16] 
[2026-04-23 07:47:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-23 07:47:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-23 07:47:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-23 07:47:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-23 07:47:16] 
[2026-04-23 07:47:16] 2026-04-23 05:43:35,441 | INFO     | **************************************
[2026-04-23 07:47:16] 2026-04-23 05:43:35,944 | INFO     | executing command: df -mP /var/lib/boinc/var/slot104/slots/12
[2026-04-23 07:47:16] 2026-04-23 05:43:35,969 | INFO     | sufficient remaining disk space (262364200960 B)
[2026-04-23 07:47:16] 2026-04-23 05:43:35,969 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-23 07:47:16] 2026-04-23 05:43:35,969 | INFO     | current server update state: UPDATING_FINAL
[2026-04-23 07:47:16] 2026-04-23 05:43:35,970 | INFO     | update_server=False
[2026-04-23 07:47:16] 2026-04-23 05:43:35,970 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-23 07:47:16] 2026-04-23 05:43:35,970 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-23 07:47:16] 2026-04-23 05:43:35,970 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-04-23 07:47:16] 2026-04-23 05:43:35,971 | INFO     | aborting loop
[2026-04-23 07:47:16] 2026-04-23 05:43:35,971 | INFO     | found 0 job(s) in 20 queues
[2026-04-23 07:47:16] 2026-04-23 05:43:35,971 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-23 07:47:16] 2026-04-23 05:43:35,972 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-23 07:47:16] 2026-04-23 05:43:36,062 | INFO     | all data control threads have been joined
[2026-04-23 07:47:16] 2026-04-23 05:43:36,285 | INFO     | all job control threads have been joined
[2026-04-23 07:47:16] 2026-04-23 05:43:36,298 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-23 07:47:16] 2026-04-23 05:43:36,975 | INFO     | [job] retrieve thread has finished
[2026-04-23 07:47:16] 2026-04-23 05:43:36,977 | INFO     | [job] job monitor thread has finished
[2026-04-23 07:47:16] 2026-04-23 05:43:37,035 | INFO     | [payload] validate_pre thread has finished
[2026-04-23 07:47:16] 2026-04-23 05:43:37,068 | INFO     | [data] control thread has finished
[2026-04-23 07:47:16] 2026-04-23 05:43:37,238 | INFO     | [payload] execute_payloads thread has finished
[2026-04-23 07:47:16] 2026-04-23 05:43:37,264 | INFO     | [data] copytool_in thread has finished
[2026-04-23 07:47:16] 2026-04-23 05:43:37,290 | INFO     | [job] control thread has finished
[2026-04-23 07:47:16] 2026-04-23 05:43:37,300 | INFO     | all payload control threads have been joined
[2026-04-23 07:47:16] 2026-04-23 05:43:37,434 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-23 07:47:16] 2026-04-23 05:43:37,866 | INFO     | [payload] validate_post thread has finished
[2026-04-23 07:47:16] 2026-04-23 05:43:38,046 | INFO     | [payload] failed_post thread has finished
[2026-04-23 07:47:16] 2026-04-23 05:43:38,143 | INFO     | [job] validate thread has finished
[2026-04-23 07:47:16] 2026-04-23 05:43:38,229 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-23 07:47:16] 2026-04-23 05:43:38,244 | INFO     | [job] create_data_payload thread has finished
[2026-04-23 07:47:16] 2026-04-23 05:43:38,304 | INFO     | [data] copytool_out thread has finished
[2026-04-23 07:47:16] 2026-04-23 05:43:38,306 | INFO     | [payload] control thread has finished
[2026-04-23 07:47:16] 2026-04-23 05:43:38,440 | INFO     | [job] queue monitor thread has finished
[2026-04-23 07:47:16] 2026-04-23 05:43:42,235 | INFO     | [data] queue_monitor thread has finished
[2026-04-23 07:47:16] 2026-04-23 05:43:46,369 | INFO     | job.realtimelogging is not enabled
[2026-04-23 07:47:16] 2026-04-23 05:43:47,374 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-23 07:47:16] 2026-04-23 05:44:22,151 | INFO     | [monitor] cgroup control has ended
[2026-04-23 07:47:16] 2026-04-23 05:44:22,677 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22611871237952)>', '<ExcThread(monitor, started 22611634702080)>']
[2026-04-23 07:47:16] 2026-04-23 05:44:23,184 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-23 07:47:16] 2026-04-23 05:44:23,184 | INFO     | [monitor] control thread has ended
[2026-04-23 07:47:16] 2026-04-23 05:44:27,703 | INFO     | all workflow threads have been joined
[2026-04-23 07:47:16] 2026-04-23 05:44:27,703 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-23 07:47:16] 2026-04-23 05:44:27,704 | INFO     | traces error code: 0
[2026-04-23 07:47:16] 2026-04-23 05:44:27,704 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-23 07:47:16] 2026-04-23 05:44:27,913 [wrapper] ==== pilot stdout END ====
[2026-04-23 07:47:16] 2026-04-23 05:44:27,916 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-23 07:47:16] 2026-04-23 05:44:27,920 [wrapper] pilotpid: 1690532
[2026-04-23 07:47:16] 2026-04-23 05:44:27,923 [wrapper] Pilot exit status: 0
[2026-04-23 07:47:16] 2026-04-23 05:44:27,936 [wrapper] pandaids: 7105217183
[2026-04-23 07:47:16] 2026-04-23 05:44:28,101 [wrapper] cleanup supervisor_pilot 1998238 1690533
[2026-04-23 07:47:16] 2026-04-23 05:44:28,105 [wrapper] Test setup, not cleaning
[2026-04-23 07:47:16] 2026-04-23 05:44:28,109 [wrapper] apfmon messages muted
[2026-04-23 07:47:16] 2026-04-23 05:44:28,112 [wrapper] ==== wrapper stdout END ====
[2026-04-23 07:47:16] 2026-04-23 05:44:28,116 [wrapper] ==== wrapper stderr END ====
[2026-04-23 07:47:16]  *** Error codes and diagnostics ***
[2026-04-23 07:47:16]     "exeErrorCode": 0,
[2026-04-23 07:47:16]     "pilotErrorCode": 0,
[2026-04-23 07:47:16]  *** Listing of results directory ***
[2026-04-23 07:47:16] total 2454776
[2026-04-23 07:47:16] -rwx------. 1 boinc boinc      36322 Apr 21 09:45 runpilot2-wrapper.sh
[2026-04-23 07:47:16] -rw-r--r--. 1 boinc boinc     644190 Apr 21 10:49 pilot3.tar.gz
[2026-04-23 07:47:16] -rw-r--r--. 1 boinc boinc       5094 Apr 21 11:14 queuedata.json
[2026-04-23 07:47:16] -rw-r--r--. 1 boinc boinc        100 Apr 23 03:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-23 07:47:16] -rwxr-xr-x. 1 boinc boinc       7986 Apr 23 03:01 run_atlas
[2026-04-23 07:47:16] -rw-r--r--. 1 boinc boinc        105 Apr 23 03:01 job.xml
[2026-04-23 07:47:16] -rw-r--r--. 1 boinc boinc       6614 Apr 23 03:01 init_data.xml
[2026-04-23 07:47:16] -rw-r--r--. 2 boinc boinc 2233515068 Apr 23 03:01 EVNT.49820373._000038.pool.root.1
[2026-04-23 07:47:16] -rw-r--r--. 2 boinc boinc      15665 Apr 23 03:01 start_atlas.sh
[2026-04-23 07:47:16] drwxrwx--x. 2 boinc boinc       4096 Apr 23 03:01 shared
[2026-04-23 07:47:16] -rw-r--r--. 2 boinc boinc     656933 Apr 23 03:01 input.tar.gz
[2026-04-23 07:47:16] -rw-r--r--. 1 boinc boinc          0 Apr 23 03:01 boinc_lockfile
[2026-04-23 07:47:16] -rw-r--r--. 1 boinc boinc       2586 Apr 23 03:01 pandaJob.out
[2026-04-23 07:47:16] -rw-------. 1 boinc boinc     997023 Apr 23 03:01 agis_schedconf.cvmfs.json
[2026-04-23 07:47:16] -rw-------. 1 boinc boinc        444 Apr 23 03:01 workernode_map.json
[2026-04-23 07:47:16] drwx------. 5 boinc boinc       4096 Apr 23 03:01 pilot3
[2026-04-23 07:47:16] -rw-------. 1 boinc boinc  272283090 Apr 23 07:42 HITS.49820375._010307.pool.root.1
[2026-04-23 07:47:16] -rw-r--r--. 1 boinc boinc        488 Apr 23 07:42 boinc_task_state.xml
[2026-04-23 07:47:16] -rw-------. 1 boinc boinc         95 Apr 23 07:42 pilot_heartbeat.json
[2026-04-23 07:47:16] -rw-------. 1 boinc boinc       1027 Apr 23 07:43 memory_monitor_summary.json
[2026-04-23 07:47:16] -rw-------. 1 boinc boinc    1509089 Apr 23 07:43 agis_ddmendpoints.agis.ALL.json
[2026-04-23 07:47:16] -rw-------. 1 boinc boinc     396028 Apr 23 07:43 log.49820375._010307.job.log.tgz.1
[2026-04-23 07:47:16] -rw-------. 1 boinc boinc       6371 Apr 23 07:43 heartbeat_new.json
[2026-04-23 07:47:16] -rw-------. 1 boinc boinc       6262 Apr 23 07:43 heartbeat.json
[2026-04-23 07:47:16] -rw-------. 1 boinc boinc       4631 Apr 23 07:44 pilotlog.txt
[2026-04-23 07:47:16] -rw-------. 1 boinc boinc    1521634 Apr 23 07:44 log.49820375._010307.job.log.1
[2026-04-23 07:47:16] -rw-------. 1 boinc boinc        357 Apr 23 07:44 output.list
[2026-04-23 07:47:16] -rw-r--r--. 1 boinc boinc        410 Apr 23 07:44 runtime_log
[2026-04-23 07:47:16] -rw-------. 1 boinc boinc    1935360 Apr 23 07:44 result.tar.gz
[2026-04-23 07:47:16] -rw-r--r--. 1 boinc boinc       8861 Apr 23 07:44 runtime_log.err
[2026-04-23 07:47:16] -rw-------. 1 boinc boinc        665 Apr 23 07:44 2b0291181142.diag
[2026-04-23 07:47:16] -rw-r--r--. 1 boinc boinc         27 Apr 23 07:46 wrapper_checkpoint.txt
[2026-04-23 07:47:16] -rw-r--r--. 1 boinc boinc       8192 Apr 23 07:47 boinc_mmap_file
[2026-04-23 07:47:16] -rw-r--r--. 1 boinc boinc      20805 Apr 23 07:47 stderr.txt
[2026-04-23 07:47:16] HITS file was successfully produced:
[2026-04-23 07:47:16] -rw-------. 1 boinc boinc 272283090 Apr 23 07:42 shared/HITS.pool.root.1
[2026-04-23 07:47:16]  *** Contents of shared directory: ***
[2026-04-23 07:47:16] total 2449632
[2026-04-23 07:47:16] -rw-r--r--. 2 boinc boinc 2233515068 Apr 23 03:01 ATLAS.root_0
[2026-04-23 07:47:16] -rw-r--r--. 2 boinc boinc      15665 Apr 23 03:01 start_atlas.sh
[2026-04-23 07:47:16] -rw-r--r--. 2 boinc boinc     656933 Apr 23 03:01 input.tar.gz
[2026-04-23 07:47:16] -rw-------. 1 boinc boinc  272283090 Apr 23 07:42 HITS.pool.root.1
[2026-04-23 07:47:16] -rw-------. 1 boinc boinc    1935360 Apr 23 07:44 result.tar.gz
07:47:17 (1686461): run_atlas exited; CPU time 66736.848170
07:47:17 (1686461): called boinc_finish(0)

</stderr_txt>
]]>

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