Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:14:17 (2794419): wrapper (7.7.26015): starting
15:14:17 (2794419): wrapper: running run_atlas (--nthreads 4)
[2026-04-21 15:14:17] Arguments: --nthreads 4
[2026-04-21 15:14:17] Threads: 4
[2026-04-21 15:14:17] Checking for CVMFS
[2026-04-21 15:14:17] No cvmfs_config command found, will try listing directly
[2026-04-21 15:14:17] CVMFS is ok
[2026-04-21 15:14:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 15:14:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 15:14:17] Further information can be found at the LHC@home message board.
[2026-04-21 15:14:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 15:14:17] Checking for apptainer binary...
[2026-04-21 15:14:17] which: no apptainer in ((null))
[2026-04-21 15:14:17] apptainer is not installed, using version from CVMFS
[2026-04-21 15:14:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 15:14:17] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot128/slots/4/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2026-04-21 15:14:17] apptainer works
[2026-04-21 15:14:17] Set ATHENA_PROC_NUMBER=4
[2026-04-21 15:14:17] Set ATHENA_CORE_NUMBER=4
[2026-04-21 15:14:17] Starting ATLAS job with PandaID=7105214595
[2026-04-21 15:14:17] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot128/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-21 18:30:21]  *** The last 200 lines of the pilot log: ***
[2026-04-21 18:30:21] 2026-04-21 16:28:56,983 | INFO     | .. there are 11 such processes running
[2026-04-21 18:30:21] 2026-04-21 16:28:57,229 | INFO     | job 7105214595 has state=finished
[2026-04-21 18:30:21] 2026-04-21 16:28:57,229 | INFO     | preparing for final server update for job 7105214595 in state='finished'
[2026-04-21 18:30:21] 2026-04-21 16:28:57,229 | INFO     | reading metadata from: /var/lib/boinc/var/slot128/slots/4/PanDA_Pilot-7105214595/jobReport.json
[2026-04-21 18:30:21] 2026-04-21 16:28:57,232 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot128/slots/4/workernode_map.json
[2026-04-21 18:30:21] 2026-04-21 16:28:57,232 | INFO     | this job has now completed (state=finished)
[2026-04-21 18:30:21] 2026-04-21 16:28:57,232 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-21 18:30:21] 2026-04-21 16:28:57,232 | INFO     | log transfer has been attempted: DONE
[2026-04-21 18:30:21] 2026-04-21 16:28:57,232 | INFO     | job 7105214595 has finished - writing final server update
[2026-04-21 18:30:21] 2026-04-21 16:28:57,233 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_11206/.job.ad'
[2026-04-21 18:30:21] 2026-04-21 16:28:57,233 | INFO     | total number of processed events: 400 (read)
[2026-04-21 18:30:21] 2026-04-21 16:28:57,256 | INFO     | using path: /var/lib/boinc/var/slot128/slots/4/PanDA_Pilot-7105214595/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 18:30:21] 2026-04-21 16:28:57,257 | INFO     | extracted standard info from prmon json
[2026-04-21 18:30:21] 2026-04-21 16:28:57,257 | INFO     | extracted standard memory fields from prmon json
[2026-04-21 18:30:21] 2026-04-21 16:28:57,257 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-21 18:30:21] 2026-04-21 16:28:57,257 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-21 18:30:21] 2026-04-21 16:28:57,261 | INFO     | fitting pss+swap vs Time
[2026-04-21 18:30:21] 2026-04-21 16:28:57,261 | INFO     | sum of square deviations: 2160561440.0
[2026-04-21 18:30:21] 2026-04-21 16:28:57,262 | INFO     | sum of deviations: 11168112592.999994
[2026-04-21 18:30:21] 2026-04-21 16:28:57,262 | INFO     | mean x (centered): 0.0
[2026-04-21 18:30:21] 2026-04-21 16:28:57,263 | INFO     | mean y: 2372024.848167539
[2026-04-21 18:30:21] 2026-04-21 16:28:57,263 | INFO     | intersect: 2372024.848167539
[2026-04-21 18:30:21] 2026-04-21 16:28:57,263 | INFO     | chi2: 1.1058638765956477
[2026-04-21 18:30:21] 2026-04-21 16:28:57,263 | INFO     | sum of square deviations: 1995283922.5
[2026-04-21 18:30:21] 2026-04-21 16:28:57,264 | INFO     | sum of deviations: 10765712947.5
[2026-04-21 18:30:21] 2026-04-21 16:28:57,264 | INFO     | mean x (centered): 0.0
[2026-04-21 18:30:21] 2026-04-21 16:28:57,265 | INFO     | mean y: 2371656.575268817
[2026-04-21 18:30:21] 2026-04-21 16:28:57,265 | INFO     | intersect: 2371656.575268817
[2026-04-21 18:30:21] 2026-04-21 16:28:57,265 | INFO     | chi2: 1.1062964016700207
[2026-04-21 18:30:21] 2026-04-21 16:28:57,265 | INFO     | current chi2=1.1062964016700207 (change=-0.03911196337333933 %)
[2026-04-21 18:30:21] 2026-04-21 16:28:57,265 | INFO     | right removable region: 185
[2026-04-21 18:30:21] 2026-04-21 16:28:57,266 | INFO     | sum of square deviations: 1995283922.5
[2026-04-21 18:30:21] 2026-04-21 16:28:57,267 | INFO     | sum of deviations: -7963123915.0
[2026-04-21 18:30:21] 2026-04-21 16:28:57,267 | INFO     | mean x (centered): 0.0
[2026-04-21 18:30:21] 2026-04-21 16:28:57,267 | INFO     | mean y: 2389384.4516129033
[2026-04-21 18:30:21] 2026-04-21 16:28:57,267 | INFO     | intersect: 2389384.4516129033
[2026-04-21 18:30:21] 2026-04-21 16:28:57,267 | INFO     | chi2: 0.008751180277110113
[2026-04-21 18:30:21] 2026-04-21 16:28:57,267 | INFO     | current chi2=0.008751180277110113 (change=99.20865664732172 %)
[2026-04-21 18:30:21] 2026-04-21 16:28:57,268 | INFO     | sum of square deviations: 1838657730.0
[2026-04-21 18:30:21] 2026-04-21 16:28:57,269 | INFO     | sum of deviations: -7009989216.0
[2026-04-21 18:30:21] 2026-04-21 16:28:57,269 | INFO     | mean x (centered): 0.0
[2026-04-21 18:30:21] 2026-04-21 16:28:57,269 | INFO     | mean y: 2388458.7900552484
[2026-04-21 18:30:21] 2026-04-21 16:28:57,269 | INFO     | intersect: 2388458.7900552484
[2026-04-21 18:30:21] 2026-04-21 16:28:57,269 | INFO     | chi2: 0.008596082340104193
[2026-04-21 18:30:21] 2026-04-21 16:28:57,269 | INFO     | current chi2=0.008596082340104193 (change=1.7723087868684424 %)
[2026-04-21 18:30:21] 2026-04-21 16:28:57,269 | INFO     | left removable region: 10
[2026-04-21 18:30:21] 2026-04-21 16:28:57,270 | INFO     | sum of square deviations: 1661798600.0
[2026-04-21 18:30:21] 2026-04-21 16:28:57,271 | INFO     | sum of deviations: -6893219965.999998
[2026-04-21 18:30:21] 2026-04-21 16:28:57,271 | INFO     | mean x (centered): 0.0
[2026-04-21 18:30:21] 2026-04-21 16:28:57,271 | INFO     | mean y: 2388584.0057142857
[2026-04-21 18:30:21] 2026-04-21 16:28:57,271 | INFO     | intersect: 2388584.0057142857
[2026-04-21 18:30:21] 2026-04-21 16:28:57,271 | INFO     | chi2: 0.008137092318003249
[2026-04-21 18:30:21] 2026-04-21 16:28:57,271 | INFO     | current memory leak: -4.15 B/s (using 175 data points, chi2=0.01)
[2026-04-21 18:30:21] 2026-04-21 16:28:57,272 | INFO     | could have reported an average CPU frequency of 2777 MHz (10 samples)
[2026-04-21 18:30:21] 2026-04-21 16:28:57,272 | INFO     | ..............................
[2026-04-21 18:30:21] 2026-04-21 16:28:57,272 | INFO     | . Timing measurements:
[2026-04-21 18:30:21] 2026-04-21 16:28:57,272 | INFO     | . get job = 0 s
[2026-04-21 18:30:21] 2026-04-21 16:28:57,272 | INFO     | . initial setup = 6 s
[2026-04-21 18:30:21] 2026-04-21 16:28:57,272 | INFO     | . payload setup = 12 s
[2026-04-21 18:30:21] 2026-04-21 16:28:57,272 | INFO     | . stage-in = 0 s
[2026-04-21 18:30:21] 2026-04-21 16:28:57,272 | INFO     | . payload execution = 11630 s
[2026-04-21 18:30:21] 2026-04-21 16:28:57,273 | INFO     | . stage-out = 1 s
[2026-04-21 18:30:21] 2026-04-21 16:28:57,273 | INFO     | . log creation = 0 s
[2026-04-21 18:30:21] 2026-04-21 16:28:57,273 | INFO     | ..............................
[2026-04-21 18:30:21] 2026-04-21 16:28:57,367 | INFO     | 
[2026-04-21 18:30:21] 2026-04-21 16:28:57,368 | INFO     | job summary report
[2026-04-21 18:30:21] 2026-04-21 16:28:57,368 | INFO     | --------------------------------------------------
[2026-04-21 18:30:21] 2026-04-21 16:28:57,368 | INFO     | PanDA job id: 7105214595
[2026-04-21 18:30:21] 2026-04-21 16:28:57,369 | INFO     | task id: 49820375
[2026-04-21 18:30:21] 2026-04-21 16:28:57,369 | INFO     | errors: (none)
[2026-04-21 18:30:21] 2026-04-21 16:28:57,369 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-21 18:30:21] 2026-04-21 16:28:57,369 | INFO     | pilot state: finished 
[2026-04-21 18:30:21] 2026-04-21 16:28:57,369 | INFO     | transexitcode: 0
[2026-04-21 18:30:21] 2026-04-21 16:28:57,369 | INFO     | exeerrorcode: 0
[2026-04-21 18:30:21] 2026-04-21 16:28:57,369 | INFO     | exeerrordiag: 
[2026-04-21 18:30:21] 2026-04-21 16:28:57,369 | INFO     | exitcode: 0
[2026-04-21 18:30:21] 2026-04-21 16:28:57,369 | INFO     | exitmsg: OK
[2026-04-21 18:30:21] 2026-04-21 16:28:57,369 | INFO     | cpuconsumptiontime: 44962 s
[2026-04-21 18:30:21] 2026-04-21 16:28:57,369 | INFO     | nevents: 400
[2026-04-21 18:30:21] 2026-04-21 16:28:57,370 | INFO     | neventsw: 0
[2026-04-21 18:30:21] 2026-04-21 16:28:57,370 | INFO     | pid: 2822538
[2026-04-21 18:30:21] 2026-04-21 16:28:57,370 | INFO     | pgrp: 2822538
[2026-04-21 18:30:21] 2026-04-21 16:28:57,370 | INFO     | corecount: 4
[2026-04-21 18:30:21] 2026-04-21 16:28:57,370 | INFO     | event service: False
[2026-04-21 18:30:21] 2026-04-21 16:28:57,370 | INFO     | sizes: {0: 2281603, 1: 2283432, 11: 2283432, 11646: 2313495, 11647: 2313494, 11648: 2315594, 11650: 2315778, 11651: 2315972}
[2026-04-21 18:30:21] 2026-04-21 16:28:57,370 | INFO     | --------------------------------------------------
[2026-04-21 18:30:21] 2026-04-21 16:28:57,370 | INFO     | 
[2026-04-21 18:30:21] 2026-04-21 16:28:57,370 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot128/slots/4
[2026-04-21 18:30:21] 2026-04-21 16:28:57,407 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-21 18:30:21] 2026-04-21 16:28:57,408 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-21 18:30:21] 2026-04-21 16:28:57,408 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-21 18:30:21] 2026-04-21 16:28:57,408 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-21 18:30:21] 2026-04-21 16:28:57,408 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-21 18:30:21] 2026-04-21 16:28:57,408 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-21 18:30:21] 2026-04-21 16:28:57,408 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-21 18:30:21] 2026-04-21 16:28:57,408 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-21 18:30:21] 2026-04-21 16:28:57,408 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-21 18:30:21] 2026-04-21 16:28:57,408 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-21 18:30:21] 2026-04-21 16:28:57,408 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-21 18:30:21] 2026-04-21 16:28:57,409 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-21 18:30:21] 2026-04-21 16:28:57,409 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-21 18:30:21] 2026-04-21 16:28:57,409 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-21 18:30:21] 2026-04-21 16:28:57,409 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-21 18:30:21] 2026-04-21 16:28:57,409 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-21 18:30:21] 2026-04-21 16:28:57,409 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-21 18:30:21] 2026-04-21 16:28:57,409 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-21 18:30:21] 2026-04-21 16:28:57,409 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-21 18:30:21] 2026-04-21 16:28:57,409 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-21 18:30:21] 2026-04-21 16:28:57,409 | INFO     | job 7105214595 has completed (purged errors)
[2026-04-21 18:30:21] 2026-04-21 16:28:57,410 | INFO     | overall cleanup function is called
[2026-04-21 18:30:21] 2026-04-21 16:28:58,420 | INFO     | --- collectZombieJob: --- 10, [2822538]
[2026-04-21 18:30:21] 2026-04-21 16:28:58,420 | INFO     | zombie collector waiting for pid 2822538
[2026-04-21 18:30:21] 2026-04-21 16:28:58,421 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-21 18:30:21] 2026-04-21 16:28:58,421 | INFO     | collected zombie processes
[2026-04-21 18:30:21] 2026-04-21 16:28:58,421 | INFO     | will attempt to kill all subprocesses of pid=2822538
[2026-04-21 18:30:21] 2026-04-21 16:28:59,145 | INFO     | process IDs to be killed: [2822538] (in reverse order)
[2026-04-21 18:30:21] 2026-04-21 16:28:59,396 | WARNING  | found no corresponding commands to process id(s)
[2026-04-21 18:30:21] 2026-04-21 16:28:59,397 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-21 18:30:21] 2026-04-21 16:28:59,423 | INFO     | did not find any defunct processes belonging to 2822538
[2026-04-21 18:30:21] 2026-04-21 16:28:59,446 | INFO     | did not find any defunct processes belonging to 2822538
[2026-04-21 18:30:21] 2026-04-21 16:28:59,446 | INFO     | Ready for new job
[2026-04-21 18:30:21] 2026-04-21 16:28:59,449 | INFO     | **************************************
[2026-04-21 18:30:21] 2026-04-21 16:28:59,449 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-21 18:30:21] 2026-04-21 16:28:59,449 | INFO     | **************************************
[2026-04-21 18:30:21] 2026-04-21 16:28:59,449 | INFO     | 
[2026-04-21 18:30:21] 2026-04-21 16:28:59,457 | INFO     | architecture information:
[2026-04-21 18:30:21] 2026-04-21 16:28:59,457 | INFO     | executing command: cat /etc/os-release
[2026-04-21 18:30:21] 2026-04-21 16:28:59,481 | INFO     | cat /etc/os-release:
[2026-04-21 18:30:21] NAME="CentOS Linux"
[2026-04-21 18:30:21] VERSION="7 (Core)"
[2026-04-21 18:30:21] ID="centos"
[2026-04-21 18:30:21] ID_LIKE="rhel fedora"
[2026-04-21 18:30:21] VERSION_ID="7"
[2026-04-21 18:30:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-21 18:30:21] ANSI_COLOR="0;31"
[2026-04-21 18:30:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-21 18:30:21] HOME_URL="https://www.centos.org/"
[2026-04-21 18:30:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-21 18:30:21] 
[2026-04-21 18:30:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-21 18:30:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-21 18:30:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-21 18:30:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-21 18:30:21] 
[2026-04-21 18:30:21] 2026-04-21 16:28:59,482 | INFO     | **************************************
[2026-04-21 18:30:21] 2026-04-21 16:28:59,985 | INFO     | executing command: df -mP /var/lib/boinc/var/slot128/slots/4
[2026-04-21 18:30:21] 2026-04-21 16:29:00,010 | INFO     | sufficient remaining disk space (154534936576 B)
[2026-04-21 18:30:21] 2026-04-21 16:29:00,010 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-21 18:30:21] 2026-04-21 16:29:00,010 | INFO     | current server update state: UPDATING_FINAL
[2026-04-21 18:30:21] 2026-04-21 16:29:00,010 | INFO     | update_server=False
[2026-04-21 18:30:21] 2026-04-21 16:29:00,011 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-21 18:30:21] 2026-04-21 16:29:00,011 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-21 18:30:21] 2026-04-21 16:29:00,011 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-21 18:30:21] 2026-04-21 16:29:00,012 | INFO     | aborting loop
[2026-04-21 18:30:21] 2026-04-21 16:29:00,682 | INFO     | all data control threads have been joined
[2026-04-21 18:30:21] 2026-04-21 16:29:00,876 | INFO     | all job control threads have been joined
[2026-04-21 18:30:21] 2026-04-21 16:29:00,978 | INFO     | all payload control threads have been joined
[2026-04-21 18:30:21] 2026-04-21 16:29:01,015 | INFO     | [job] retrieve thread has finished
[2026-04-21 18:30:21] 2026-04-21 16:29:01,018 | INFO     | [job] job monitor thread has finished
[2026-04-21 18:30:21] 2026-04-21 16:29:01,064 | INFO     | [job] validate thread has finished
[2026-04-21 18:30:21] 2026-04-21 16:29:01,075 | INFO     | [job] create_data_payload thread has finished
[2026-04-21 18:30:21] 2026-04-21 16:29:01,147 | INFO     | [payload] validate_pre thread has finished
[2026-04-21 18:30:21] 2026-04-21 16:29:01,580 | INFO     | [payload] validate_post thread has finished
[2026-04-21 18:30:21] 2026-04-21 16:29:01,662 | INFO     | [data] copytool_in thread has finished
[2026-04-21 18:30:21] 2026-04-21 16:29:01,688 | INFO     | [data] control thread has finished
[2026-04-21 18:30:21] 2026-04-21 16:29:01,881 | INFO     | [job] control thread has finished
[2026-04-21 18:30:21] 2026-04-21 16:29:01,984 | INFO     | [payload] control thread has finished
[2026-04-21 18:30:21] 2026-04-21 16:29:02,017 | INFO     | [data] copytool_out thread has finished
[2026-04-21 18:30:21] 2026-04-21 16:29:02,159 | INFO     | [payload] failed_post thread has finished
[2026-04-21 18:30:21] 2026-04-21 16:29:02,304 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-21 18:30:21] 2026-04-21 16:29:02,378 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-21 18:30:21] 2026-04-21 16:29:02,469 | INFO     | [payload] execute_payloads thread has finished
[2026-04-21 18:30:21] 2026-04-21 16:29:03,384 | INFO     | [job] queue monitor thread has finished
[2026-04-21 18:30:21] 2026-04-21 16:29:06,310 | INFO     | [data] queue_monitor thread has finished
[2026-04-21 18:30:21] 2026-04-21 16:29:10,944 | INFO     | job.realtimelogging is not enabled
[2026-04-21 18:30:21] 2026-04-21 16:29:11,949 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-21 18:30:21] 2026-04-21 16:29:28,100 [wrapper] supervise_pilot (15 min periods counter: 14)
[2026-04-21 18:30:21] 2026-04-21 16:29:29,838 | INFO     | PID=2805471 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-21 18:30:21] 2026-04-21 16:29:29,839 | INFO     | .. there are 11 such processes running
[2026-04-21 18:30:21] 2026-04-21 16:29:29,839 | INFO     | found 0 job(s) in 20 queues
[2026-04-21 18:30:21] 2026-04-21 16:29:29,839 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-21 18:30:21] 2026-04-21 16:29:29,839 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-21 18:30:21] 2026-04-21 16:29:51,721 | INFO     | [monitor] cgroup control has ended
[2026-04-21 18:30:21] 2026-04-21 16:29:53,590 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22979064350528)>', '<ExcThread(monitor, started 22978825037568)>']
[2026-04-21 18:30:21] 2026-04-21 16:29:53,955 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-21 18:30:21] 2026-04-21 16:29:53,956 | INFO     | [monitor] control thread has ended
[2026-04-21 18:30:21] 2026-04-21 16:29:58,607 | INFO     | all workflow threads have been joined
[2026-04-21 18:30:21] 2026-04-21 16:29:58,608 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-21 18:30:21] 2026-04-21 16:29:58,608 | INFO     | traces error code: 0
[2026-04-21 18:30:21] 2026-04-21 16:29:58,608 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-21 18:30:21] 2026-04-21 16:29:58,744 [wrapper] ==== pilot stdout END ====
[2026-04-21 18:30:21] 2026-04-21 16:29:58,749 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-21 18:30:21] 2026-04-21 16:29:58,752 [wrapper] pilotpid: 2805471
[2026-04-21 18:30:21] 2026-04-21 16:29:58,756 [wrapper] Pilot exit status: 0
[2026-04-21 18:30:21] 2026-04-21 16:29:58,770 [wrapper] pandaids: 7105214595
[2026-04-21 18:30:21] 2026-04-21 16:29:58,938 [wrapper] cleanup supervisor_pilot 3144973 2805472
[2026-04-21 18:30:21] 2026-04-21 16:29:58,943 [wrapper] Test setup, not cleaning
[2026-04-21 18:30:21] 2026-04-21 16:29:58,947 [wrapper] apfmon messages muted
[2026-04-21 18:30:21] 2026-04-21 16:29:58,951 [wrapper] ==== wrapper stdout END ====
[2026-04-21 18:30:21] 2026-04-21 16:29:58,955 [wrapper] ==== wrapper stderr END ====
[2026-04-21 18:30:21]  *** Error codes and diagnostics ***
[2026-04-21 18:30:21]     "exeErrorCode": 0,
[2026-04-21 18:30:21]     "pilotErrorCode": 0,
[2026-04-21 18:30:21]  *** Listing of results directory ***
[2026-04-21 18:30:21] total 2462072
[2026-04-21 18:30:21] -rwx------. 1 boinc boinc      36322 Apr 21 09:44 runpilot2-wrapper.sh
[2026-04-21 18:30:21] -rw-r--r--. 1 boinc boinc     644190 Apr 21 10:49 pilot3.tar.gz
[2026-04-21 18:30:21] -rw-r--r--. 1 boinc boinc       5094 Apr 21 11:14 queuedata.json
[2026-04-21 18:30:21] -rw-r--r--. 1 boinc boinc        100 Apr 21 15:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-21 18:30:21] -rwxr-xr-x. 1 boinc boinc       7986 Apr 21 15:14 run_atlas
[2026-04-21 18:30:21] -rw-r--r--. 1 boinc boinc        105 Apr 21 15:14 job.xml
[2026-04-21 18:30:21] -rw-r--r--. 1 boinc boinc       6612 Apr 21 15:14 init_data.xml
[2026-04-21 18:30:21] -rw-r--r--. 2 boinc boinc 2238876406 Apr 21 15:14 EVNT.49820373._000032.pool.root.1
[2026-04-21 18:30:21] -rw-r--r--. 2 boinc boinc      15665 Apr 21 15:14 start_atlas.sh
[2026-04-21 18:30:21] drwxrwx--x. 2 boinc boinc       4096 Apr 21 15:14 shared
[2026-04-21 18:30:21] -rw-r--r--. 2 boinc boinc     656938 Apr 21 15:14 input.tar.gz
[2026-04-21 18:30:21] -rw-r--r--. 1 boinc boinc          0 Apr 21 15:14 boinc_lockfile
[2026-04-21 18:30:21] -rw-r--r--. 1 boinc boinc       2586 Apr 21 15:14 pandaJob.out
[2026-04-21 18:30:21] -rw-------. 1 boinc boinc     994521 Apr 21 15:14 agis_schedconf.cvmfs.json
[2026-04-21 18:30:21] -rw-------. 1 boinc boinc        443 Apr 21 15:14 workernode_map.json
[2026-04-21 18:30:21] drwx------. 5 boinc boinc       4096 Apr 21 15:14 pilot3
[2026-04-21 18:30:21] -rw-------. 1 boinc boinc  275198527 Apr 21 18:28 HITS.49820375._010286.pool.root.1
[2026-04-21 18:30:21] -rw-r--r--. 1 boinc boinc        489 Apr 21 18:28 boinc_task_state.xml
[2026-04-21 18:30:21] -rw-------. 1 boinc boinc         95 Apr 21 18:28 pilot_heartbeat.json
[2026-04-21 18:30:21] -rw-------. 1 boinc boinc       1029 Apr 21 18:28 memory_monitor_summary.json
[2026-04-21 18:30:21] -rw-------. 1 boinc boinc    1509089 Apr 21 18:28 agis_ddmendpoints.agis.ALL.json
[2026-04-21 18:30:21] -rw-------. 1 boinc boinc     433259 Apr 21 18:28 log.49820375._010286.job.log.tgz.1
[2026-04-21 18:30:21] -rw-------. 1 boinc boinc       6387 Apr 21 18:28 heartbeat_new.json
[2026-04-21 18:30:21] -rw-------. 1 boinc boinc       6278 Apr 21 18:28 heartbeat.json
[2026-04-21 18:30:21] -rw-------. 1 boinc boinc       4902 Apr 21 18:29 pilotlog.txt
[2026-04-21 18:30:21] -rw-------. 1 boinc boinc    1085184 Apr 21 18:29 log.49820375._010286.job.log.1
[2026-04-21 18:30:21] -rw-------. 1 boinc boinc        357 Apr 21 18:29 output.list
[2026-04-21 18:30:21] -rw-r--r--. 1 boinc boinc        410 Apr 21 18:29 runtime_log
[2026-04-21 18:30:21] -rw-------. 1 boinc boinc    1536000 Apr 21 18:29 result.tar.gz
[2026-04-21 18:30:21] -rw-r--r--. 1 boinc boinc       8844 Apr 21 18:29 runtime_log.err
[2026-04-21 18:30:21] -rw-------. 1 boinc boinc        664 Apr 21 18:29 2af12bc6dc19.diag
[2026-04-21 18:30:21] -rw-r--r--. 1 boinc boinc         27 Apr 21 18:30 wrapper_checkpoint.txt
[2026-04-21 18:30:21] -rw-r--r--. 1 boinc boinc       8192 Apr 21 18:30 boinc_mmap_file
[2026-04-21 18:30:21] -rw-r--r--. 1 boinc boinc      21026 Apr 21 18:30 stderr.txt
[2026-04-21 18:30:21] HITS file was successfully produced:
[2026-04-21 18:30:21] -rw-------. 1 boinc boinc 275198527 Apr 21 18:28 shared/HITS.pool.root.1
[2026-04-21 18:30:21]  *** Contents of shared directory: ***
[2026-04-21 18:30:21] total 2457324
[2026-04-21 18:30:21] -rw-r--r--. 2 boinc boinc 2238876406 Apr 21 15:14 ATLAS.root_0
[2026-04-21 18:30:21] -rw-r--r--. 2 boinc boinc      15665 Apr 21 15:14 start_atlas.sh
[2026-04-21 18:30:21] -rw-r--r--. 2 boinc boinc     656938 Apr 21 15:14 input.tar.gz
[2026-04-21 18:30:21] -rw-------. 1 boinc boinc  275198527 Apr 21 18:28 HITS.pool.root.1
[2026-04-21 18:30:21] -rw-------. 1 boinc boinc    1536000 Apr 21 18:29 result.tar.gz
18:30:22 (2794419): run_atlas exited; CPU time 45644.774415
18:30:22 (2794419): called boinc_finish(0)

</stderr_txt>
]]>

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